Cow genome map
| Conread name: | Ss1.1-rlyg14_j16.5 |
| Conread position: | 12-285 |
| Cow position: | chr10:9010137-9009864 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-349 |
| Cow position: | chr10:8996325-8995988 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-416 |
| Cow position: | chr10:8996745-8996341 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 280 |
| Conread position: | 12-420 |
| Cow position: | chr10:8996493-8996085 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-428 |
| Cow position: | chr10:8996409-8995993 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-228 |
| Cow position: | chr10:9010052-9009837 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 114, 122 |
| Conread position: | 13-244 |
| Cow position: | chr10:9031433-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-399 |
| Cow position: | chr10:9010556-9010170 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 115, 119 |
| Conread position: | 13-416 |
| Cow position: | chr10:9010304-9009901 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 124 |
| Conread position: | 14-274 |
| Cow position: | chr10:9031350-9031610 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-413 |
| Cow position: | chr10:21939058-21938662 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 44, 29 |
| Conread position: | 15-425 |
| Cow position: | chr10:8996574-8996165 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 402, 0 |
| Conread position: | 16-361 |
| Cow position: | chr10:21938973-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 128, 123 |
| Conread position: | 16-416 |
| Cow position: | chr10:8996657-8996257 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-416 |
| Cow position: | chr10:8996825-8996425 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 16-417 |
| Cow position: | chr10:9010469-9010068 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 260 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 107, 99 |
| Conread position: | 19-202 |
| Cow position: | chr10:9031672-9031856 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 19-416 |
| Cow position: | chr10:21939222-21938825 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 55-412 |
| Cow position: | chr10:9031307-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 58-425 |
| Cow position: | chr10:8996867-8996501 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 0 |
| Conread position: | 60-417 |
| Cow position: | chr10:9031228-9031585 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 65, 79 |
| Conread position: | 94-417 |
| Cow position: | chr10:9010559-9010236 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 110, 127 |
| Conread position: | 98-416 |
| Cow position: | chr10:9031182-9031500 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 114-425 |
| Cow position: | chr10:8996895-8996585 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 303, 0 |
| Conread position: | 154-425 |
| Cow position: | chr10:9010581-9010312 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 148, 18 |
Show alignments to all cow chromosomes.