Cow genome map


           Conread name:
           Ss1.1-rlyg14_j16.5
        

               Conread position:
               12-285
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-349
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-416
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 280
               

               Conread position:
               12-420
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-428
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-228
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               114, 122
               

               Conread position:
               13-244
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-399
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               250
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               115, 119
               

               Conread position:
               13-416
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 124
               

               Conread position:
               14-274
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-413
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               44, 29
               

               Conread position:
               15-425
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               402, 0
               

               Conread position:
               16-361
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               128, 123
               

               Conread position:
               16-416
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               16-416
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 31
               

               Conread position:
               16-417
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               260
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               107, 99
               

               Conread position:
               19-202
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               19-416
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               252
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               55-412
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               58-425
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               359, 0
               

               Conread position:
               60-417
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               65, 79
               

               Conread position:
               94-417
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               110, 127
               

               Conread position:
               98-416
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               114-425
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               303, 0
               

               Conread position:
               154-425
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               148, 18
               
Show alignments to all cow chromosomes.