Cow genome map
| Conread name: | Ss1.1-rlyg14_j16.5 |
| Conread position: | 9-416 |
| Cow position: | chr13:56292341-56291946 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 117, 5 |
| Conread position: | 12-445 |
| Cow position: | chr13:56292255-56291831 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 286 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 359, 61 |
| Conread position: | 15-401 |
| Cow position: | chr13:56292176-56291792 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 15-416 |
| Cow position: | chr13:39984003-39984404 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-343 |
| Cow position: | chr13:39930836-39931161 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 18-243 |
| Cow position: | chr13:39984678-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 18-371 |
| Cow position: | chr13:39984510-39984863 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 18-416 |
| Cow position: | chr13:39984426-39984824 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 377 |
| Conread position: | 19-311 |
| Cow position: | chr13:56317532-56317822 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 19-416 |
| Cow position: | chr13:39984091-39984488 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 256 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 19-416 |
| Cow position: | chr13:39984175-39984572 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 19-416 |
| Cow position: | chr13:39984259-39984656 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 19-416 |
| Cow position: | chr13:39984343-39984740 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-407 |
| Cow position: | chr13:39983841-39984227 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-323 |
| Cow position: | chr13:39984601-39984899 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 24, 15 |
| Conread position: | 29-448 |
| Cow position: | chr13:39983933-39984353 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 49-426 |
| Cow position: | chr13:56333937-56334322 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 76, 80 |
| Conread position: | 49-453 |
| Cow position: | chr13:56333517-56333922 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 72 |
| Conread position: | 50-416 |
| Cow position: | chr13:56333685-56334052 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 9, 331 |
| Conread position: | 58-416 |
| Cow position: | chr13:56333610-56333968 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 58-442 |
| Cow position: | chr13:56317930-56318315 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 75, 66 |
| Conread position: | 59-423 |
| Cow position: | chr13:56292718-56292355 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 141, 205 |
| Conread position: | 84-416 |
| Cow position: | chr13:39983820-39984152 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 98, 114 |
| Conread position: | 87-426 |
| Cow position: | chr13:56292853-56292519 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 292, 78 |
Show alignments to all cow chromosomes.