Cow genome map


           Conread name:
           Ss1.1-rlyg14_j16.5
        

               Conread position:
               12-254
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               32, 37
               

               Conread position:
               12-255
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-349
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               201, 193
               

               Conread position:
               12-412
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 277
               

               Conread position:
               12-416
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 110
               

               Conread position:
               12-416
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 194
               

               Conread position:
               12-420
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 26
               

               Conread position:
               13-416
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-343
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-425
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 192
               

               Conread position:
               14-448
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 85
               

               Conread position:
               15-280
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               240, 0
               

               Conread position:
               15-416
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               15-416
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               15-420
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               380, 374
               

               Conread position:
               16-219
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               107, 91
               

               Conread position:
               16-346
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               127, 123
               

               Conread position:
               16-348
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               318, 0
               

               Conread position:
               16-417
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 273
               

               Conread position:
               16-417
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 123
               

               Conread position:
               16-425
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               401, 0
               

               Conread position:
               17-416
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               19-401
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 25
               

               Conread position:
               19-416
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               19-416
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               344, 331
               

               Conread position:
               19-416
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               19-417
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               23-429
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               268, 274
               

               Conread position:
               25-420
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               31-401
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               31-445
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               387, 0
               

               Conread position:
               58-416
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               58-432
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 76
               

               Conread position:
               59-431
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               358, 0
               

               Conread position:
               62-420
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               235
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               82-420
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               91-284
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               101, 91
               

               Conread position:
               185-387
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               221-425
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               198, 0
               
Show alignments to all cow chromosomes.