Cow genome map

Conread name: Ss1.1-rlyg14_j16.5

Conread position: 12-251
Cow position: chr3:62743193-62743432 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 12-332
Cow position: chr3:68046038-68046356 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 212
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 305, 0

Conread position: 12-338
Cow position: chr3:68027445-68027769 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 114

Conread position: 12-368
Cow position: chr3:68027025-68027381 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 233
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 277, 290

Conread position: 12-416
Cow position: chr3:62722056-62721652 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 279

Conread position: 12-416
Cow position: chr3:62742463-62742862 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 262
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 83, 63

Conread position: 12-420
Cow position: chr3:62721972-62721564 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-420
Cow position: chr3:62742794-62743181 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 265
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 90, 104

Conread position: 14-429
Cow position: chr3:68027279-68027694 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-398
Cow position: chr3:68045957-68046340 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-416
Cow position: chr3:62722221-62721820 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-416
Cow position: chr3:62722305-62721904 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 26

Conread position: 15-416
Cow position: chr3:62742299-62742696 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 251
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 15-416
Cow position: chr3:62742382-62742778 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 263
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 259, 0

Conread position: 15-416
Cow position: chr3:62743033-62743429 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 261
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 282, 82

Conread position: 15-417
Cow position: chr3:62722137-62721735 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-425
Cow position: chr3:77351053-77350654 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 272
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 30, 16

Conread position: 16-377
Cow position: chr3:68045790-68046151 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 16-395
Cow position: chr3:68027365-68027744 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 239
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 16-416
Cow position: chr3:68045706-68046106 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 196

Conread position: 16-417
Cow position: chr3:68027113-68027514 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-401
Cow position: chr3:62742552-62742932 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 89

Conread position: 17-425
Cow position: chr3:68045875-68046282 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 402, 0

Conread position: 18-417
Cow position: chr3:68045624-68046023 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 275

Conread position: 21-409
Cow position: chr3:62743118-62743506 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 254
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 194, 183

Conread position: 21-416
Cow position: chr3:62742638-62743026 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 21

Conread position: 27-425
Cow position: chr3:62742229-62742623 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 251
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 15, 0

Conread position: 57-425
Cow position: chr3:68045579-68045947 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 235
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 338, 323

Conread position: 57-425
Cow position: chr3:77350934-77350569 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 243
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 250, 236

Conread position: 85-425
Cow position: chr3:62722319-62721980 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 44

Conread position: 99-420
Cow position: chr3:62743033-62743349 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 103-425
Cow position: chr3:68027032-68027353 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 22

Conread position: 107-420
Cow position: chr3:62722381-62722068 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 60, 50

Conread position: 177-416
Cow position: chr3:68027022-68027261 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 221-416
Cow position: chr3:68026982-68027177 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.