Cow genome map
| Conread name: | Ss1.1-rlyg14_j16.5 |
| Conread position: | 12-416 |
| Cow position: | chr6:49340589-49340993 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 32 |
| Conread position: | 12-417 |
| Cow position: | chr6:49340757-49341162 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 12-425 |
| Cow position: | chr6:49340925-49341338 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-434 |
| Cow position: | chr6:49341009-49341432 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 116 |
| Conread position: | 12-445 |
| Cow position: | chr6:49340505-49340939 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 115 |
| Conread position: | 12-446 |
| Cow position: | chr6:49340421-49340856 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 286 |
| Conread position: | 13-289 |
| Cow position: | chr6:49341178-49341453 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 263, 0 |
| Conread position: | 13-407 |
| Cow position: | chr6:49396311-49396705 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 259 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 15-420 |
| Cow position: | chr6:49396397-49396802 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 255 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 117, 126 |
| Conread position: | 17-436 |
| Cow position: | chr6:49340846-49341266 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 126 |
| Conread position: | 18-401 |
| Cow position: | chr6:49396154-49396531 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 287, 77 |
| Conread position: | 18-416 |
| Cow position: | chr6:49396070-49396462 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 118, 125 |
| Conread position: | 19-415 |
| Cow position: | chr6:49396233-49396629 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 254 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 108, 122 |
| Conread position: | 19-416 |
| Cow position: | chr6:49396485-49396882 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 85, 81 |
| Conread position: | 19-421 |
| Cow position: | chr6:49396569-49396970 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 117, 123 |
| Conread position: | 19-436 |
| Cow position: | chr6:49340680-49341098 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 35 |
| Conread position: | 25-425 |
| Cow position: | chr6:49395825-49396224 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 62, 43 |
| Conread position: | 58-415 |
| Cow position: | chr6:49429131-49429488 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 68, 83 |
| Conread position: | 58-417 |
| Cow position: | chr6:49362246-49362593 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 175, 69 |
| Conread position: | 121-416 |
| Cow position: | chr6:49340362-49340657 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 174, 169 |
Show alignments to all cow chromosomes.