Cow genome map

Conread name: Ss1.1-rlyg14_j16.5

Conread position: 12-312
Cow position:
Alignm length: 301
Alignm identity: 206
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 12-368
Cow position:
Alignm length: 358
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 22

Conread position: 12-411
Cow position:
Alignm length: 410
Alignm identity: 262
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 299, 282

Conread position: 12-416
Cow position:
Alignm length: 405
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-416
Cow position:
Alignm length: 409
Alignm identity: 265
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 26

Conread position: 12-416
Cow position:
Alignm length: 408
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 24

Conread position: 12-416
Cow position:
Alignm length: 406
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 280

Conread position: 12-416
Cow position:
Alignm length: 406
Alignm identity: 262
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 363, 374

Conread position: 12-417
Cow position:
Alignm length: 407
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 61

Conread position: 12-417
Cow position:
Alignm length: 406
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-420
Cow position:
Alignm length: 411
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 46

Conread position: 12-420
Cow position:
Alignm length: 412
Alignm identity: 269
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 116, 121

Conread position: 12-425
Cow position:
Alignm length: 414
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 0

Conread position: 12-432
Cow position:
Alignm length: 422
Alignm identity: 270
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 381, 372

Conread position: 12-433
Cow position:
Alignm length: 423
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 414, 0

Conread position: 12-448
Cow position:
Alignm length: 438
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 414, 0

Conread position: 13-416
Cow position:
Alignm length: 409
Alignm identity: 254
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 73, 135

Conread position: 13-416
Cow position:
Alignm length: 407
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 48

Conread position: 13-416
Cow position:
Alignm length: 404
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 13-416
Cow position:
Alignm length: 406
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 223

Conread position: 14-342
Cow position:
Alignm length: 331
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 287, 275

Conread position: 14-414
Cow position:
Alignm length: 401
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-411
Cow position:
Alignm length: 397
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-416
Cow position:
Alignm length: 402
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-417
Cow position:
Alignm length: 405
Alignm identity: 263
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 73, 86

Conread position: 15-417
Cow position:
Alignm length: 403
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-420
Cow position:
Alignm length: 406
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-420
Cow position:
Alignm length: 406
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-425
Cow position:
Alignm length: 413
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 128

Conread position: 15-425
Cow position:
Alignm length: 416
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 40

Conread position: 15-438
Cow position:
Alignm length: 428
Alignm identity: 270
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 23, 35

Conread position: 16-348
Cow position:
Alignm length: 335
Alignm identity: 218
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 282, 270

Conread position: 16-413
Cow position:
Alignm length: 398
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 16-416
Cow position:
Alignm length: 403
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 9

Conread position: 16-421
Cow position:
Alignm length: 407
Alignm identity: 251
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 92, 111

Conread position: 16-425
Cow position:
Alignm length: 410
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 0

Conread position: 17-416
Cow position:
Alignm length: 401
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 112

Conread position: 17-416
Cow position:
Alignm length: 400
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-420
Cow position:
Alignm length: 406
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 279

Conread position: 18-440
Cow position:
Alignm length: 425
Alignm identity: 273
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 28

Conread position: 19-434
Cow position:
Alignm length: 417
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 0

Conread position: 30-417
Cow position:
Alignm length: 388
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 58-425
Cow position:
Alignm length: 370
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 7

Conread position: 58-425
Cow position:
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 67

Conread position: 62-416
Cow position:
Alignm length: 356
Alignm identity: 228
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 63, 47

Conread position: 84-416
Cow position:
Alignm length: 333
Alignm identity: 221
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 141-425
Cow position:
Alignm length: 288
Alignm identity: 192
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 12, 25

Conread position: 151-416
Cow position:
Alignm length: 269
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 5

Conread position: 185-412
Cow position:
Alignm length: 228
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.