Cow genome map

Conread name: Ss1.1-rlyg14_j16.5

Conread position: 6-368
Cow position:
Alignm length: 365
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 108

Conread position: 12-265
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 12-266
Cow position:
Alignm length: 255
Alignm identity: 176
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 12-288
Cow position:
Alignm length: 277
Alignm identity: 188
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 243, 0

Conread position: 12-368
Cow position:
Alignm length: 358
Alignm identity: 234
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 23, 34

Conread position: 12-416
Cow position:
Alignm length: 408
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 25

Conread position: 12-424
Cow position:
Alignm length: 415
Alignm identity: 264
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 29, 38

Conread position: 12-425
Cow position:
Alignm length: 416
Alignm identity: 263
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 290, 277

Conread position: 12-425
Cow position:
Alignm length: 415
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 276

Conread position: 12-425
Cow position:
Alignm length: 416
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 38

Conread position: 13-416
Cow position:
Alignm length: 408
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 25

Conread position: 13-420
Cow position:
Alignm length: 409
Alignm identity: 261
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 46, 40

Conread position: 13-420
Cow position:
Alignm length: 410
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 130

Conread position: 14-278
Cow position:
Alignm length: 266
Alignm identity: 172
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 198, 190

Conread position: 14-347
Cow position:
Alignm length: 334
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-416
Cow position:
Alignm length: 404
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 363

Conread position: 14-416
Cow position:
Alignm length: 407
Alignm identity: 265
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 115, 99

Conread position: 15-345
Cow position:
Alignm length: 332
Alignm identity: 217
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 124, 128

Conread position: 15-351
Cow position:
Alignm length: 337
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-356
Cow position:
Alignm length: 344
Alignm identity: 216
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 140, 135

Conread position: 15-371
Cow position:
Alignm length: 357
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-416
Cow position:
Alignm length: 404
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 28

Conread position: 15-416
Cow position:
Alignm length: 404
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 29

Conread position: 15-424
Cow position:
Alignm length: 412
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 128

Conread position: 15-425
Cow position:
Alignm length: 411
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 0

Conread position: 16-370
Cow position:
Alignm length: 359
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 34

Conread position: 16-402
Cow position:
Alignm length: 388
Alignm identity: 235
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 43, 23

Conread position: 16-445
Cow position:
Alignm length: 433
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 368

Conread position: 17-372
Cow position:
Alignm length: 359
Alignm identity: 218
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 126, 105

Conread position: 18-425
Cow position:
Alignm length: 409
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 21

Conread position: 19-370
Cow position:
Alignm length: 354
Alignm identity: 218
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 107, 112

Conread position: 19-423
Cow position:
Alignm length: 405
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 0

Conread position: 19-448
Cow position:
Alignm length: 432
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 124

Conread position: 48-416
Cow position:
Alignm length: 370
Alignm identity: 240
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 86, 73

Conread position: 58-416
Cow position:
Alignm length: 361
Alignm identity: 241
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 65, 81

Conread position: 58-425
Cow position:
Alignm length: 370
Alignm identity: 240
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 67, 71

Conread position: 59-420
Cow position:
Alignm length: 362
Alignm identity: 236
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 16, 0

Conread position: 77-431
Cow position:
Alignm length: 355
Alignm identity: 233
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 342, 0

Conread position: 103-376
Cow position:
Alignm length: 275
Alignm identity: 172
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 208, 185

Conread position: 108-416
Cow position:
Alignm length: 311
Alignm identity: 202
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 60, 67

Conread position: 139-413
Cow position:
Alignm length: 275
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 143-368
Cow position:
Alignm length: 228
Alignm identity: 153
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 88, 66

Conread position: 154-417
Cow position:
Alignm length: 265
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 64, 49

Conread position: 183-416
Cow position:
Alignm length: 237
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 66, 77

Show alignments to all cow chromosomes.