Cow genome map


           Conread name:
           Ss1.1-rmed03c_j15.5
        

               Conread position:
               240-549
               

               Cow position:
               chr14:434087-434393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               303-709
               

               Cow position:
               chr14:433813-434217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               220, 5
               

               Conread position:
               308-665
               

               Cow position:
               chr14:3061482-3061126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               124, 6
               

               Conread position:
               328-678
               

               Cow position:
               chr14:447783-448133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               105, 110
               

               Conread position:
               366-709
               

               Cow position:
               chr14:680455-680798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 72
               

               Conread position:
               379-551
               

               Cow position:
               chr14:3155654-3155826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               62, 52
               

               Conread position:
               379-678
               

               Cow position:
               chr14:3061496-3061197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 50
               

               Conread position:
               379-684
               

               Cow position:
               chr14:680638-680941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               418-666
               

               Cow position:
               chr14:3128158-3127910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               118, 114
               

               Conread position:
               451-666
               

               Cow position:
               chr14:3080277-3080062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.