Cow genome map
| Conread name: | Ss1.1-rmed03c_j15.5 |
| Conread position: | 1-719 |
| Cow position: | chr18:44817525-44818243 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 660 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 224-540 |
| Cow position: | chr18:54668685-54668369 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 93, 61 |
| Conread position: | 224-549 |
| Cow position: | chr18:56391169-56390847 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 42 |
| Conread position: | 224-598 |
| Cow position: | chr18:56391253-56390882 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 224-666 |
| Cow position: | chr18:56391421-56390982 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 39 |
| Conread position: | 225-585 |
| Cow position: | chr18:54668768-54668411 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 253-539 |
| Cow position: | chr18:44944321-44944610 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 277-713 |
| Cow position: | chr18:55497643-55497210 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 279 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 83, 18 |
| Conread position: | 294-678 |
| Cow position: | chr18:47846524-47846140 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 21 |
| Conread position: | 319-622 |
| Cow position: | chr18:56391968-56391665 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 113, 123 |
| Conread position: | 328-582 |
| Cow position: | chr18:46317180-46316926 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 211, 201 |
| Conread position: | 328-656 |
| Cow position: | chr18:55497679-55497351 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 105, 110 |
| Conread position: | 359-709 |
| Cow position: | chr18:56391457-56391107 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 241, 259 |
| Conread position: | 366-666 |
| Cow position: | chr18:55497389-55497089 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 152, 146 |
| Conread position: | 367-657 |
| Cow position: | chr18:47846367-47846077 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 184, 194 |
| Conread position: | 367-666 |
| Cow position: | chr18:56329869-56329570 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 62, 77 |
| Conread position: | 367-678 |
| Cow position: | chr18:47846703-47846392 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 148, 155 |
| Conread position: | 378-709 |
| Cow position: | chr18:56391522-56391191 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 222, 241 |
Show alignments to all cow chromosomes.