Cow genome map


           Conread name:
           Ss1.1-rmed03c_j15.5
        

               Conread position:
               224-666
               

               Cow position:
               chr21:12659176-12659615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               49, 39
               

               Conread position:
               271-709
               

               Cow position:
               chr21:12659307-12659742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               161, 24
               

               Conread position:
               295-666
               

               Cow position:
               chr21:12659496-12659867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               12, 18
               

               Conread position:
               317-666
               

               Cow position:
               chr21:12658846-12659195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               307, 314
               

               Conread position:
               317-666
               

               Cow position:
               chr21:12659602-12659951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               218, 213
               

               Conread position:
               317-708
               

               Cow position:
               chr21:12659434-12659825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               36, 28
               

               Conread position:
               328-665
               

               Cow position:
               chr21:12658941-12659278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               203, 208
               

               Conread position:
               366-666
               

               Cow position:
               chr21:12659063-12659363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.