Cow genome map
| Conread name: | Ss1.1-rmed03c_j15.5 |
| Conread position: | 224-585 |
| Cow position: | chr25:33529105-33529463 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 206, 68 |
| Conread position: | 224-666 |
| Cow position: | chr25:25652783-25653222 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 284 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 47, 40 |
| Conread position: | 227-622 |
| Cow position: | chr25:3676002-3676394 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 205, 65 |
| Conread position: | 232-622 |
| Cow position: | chr25:4657450-4657063 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 136, 60 |
| Conread position: | 267-709 |
| Cow position: | chr25:25652322-25652761 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 271 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 273, 25 |
| Conread position: | 269-666 |
| Cow position: | chr25:25652240-25652634 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 264 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 163, 26 |
| Conread position: | 270-704 |
| Cow position: | chr25:25652913-25653344 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 161, 22 |
| Conread position: | 295-666 |
| Cow position: | chr25:25652601-25652970 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 138, 13 |
| Conread position: | 308-637 |
| Cow position: | chr25:3664272-3664600 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 215, 6 |
| Conread position: | 316-709 |
| Cow position: | chr25:3663943-3664336 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 8, 14 |
| Conread position: | 319-598 |
| Cow position: | chr25:33506847-33507126 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 114, 134 |
| Conread position: | 328-652 |
| Cow position: | chr25:4657441-4657117 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 124, 104 |
| Conread position: | 328-666 |
| Cow position: | chr25:25652716-25653054 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 100, 110 |
| Conread position: | 328-679 |
| Cow position: | chr25:25652212-25652563 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 102, 114 |
| Conread position: | 328-708 |
| Cow position: | chr25:33529038-33529418 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 195, 199 |
| Conread position: | 364-666 |
| Cow position: | chr25:25652500-25652802 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 64, 74 |
| Conread position: | 364-708 |
| Cow position: | chr25:33530121-33530465 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 159, 163 |
| Conread position: | 366-678 |
| Cow position: | chr25:3636332-3636020 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 297, 292 |
| Conread position: | 367-678 |
| Cow position: | chr25:24385101-24384790 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 51 |
| Conread position: | 367-696 |
| Cow position: | chr25:33530460-33530789 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 71 |
| Conread position: | 367-709 |
| Cow position: | chr25:25652587-25652929 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 72, 64 |
| Conread position: | 367-709 |
| Cow position: | chr25:33530376-33530718 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 367-712 |
| Cow position: | chr25:33530292-33530637 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 248, 239 |
| Conread position: | 393-666 |
| Cow position: | chr25:25652193-25652466 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 403-656 |
| Cow position: | chr25:4657450-4657197 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 132, 123 |
Show alignments to all cow chromosomes.