Cow genome map


           Conread name:
           Ss1.1-rmed03c_j15.5
        

               Conread position:
               279-666
               

               Cow position:
               chr6:49428626-49429010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               245, 13
               

               Conread position:
               295-666
               

               Cow position:
               chr6:49428473-49428842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               137, 13
               

               Conread position:
               328-661
               

               Cow position:
               chr6:49428252-49428584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               105, 114
               

               Conread position:
               328-666
               

               Cow position:
               chr6:49428336-49428674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               84, 80
               

               Conread position:
               363-667
               

               Cow position:
               chr6:49428791-49429095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               70, 75
               

               Conread position:
               379-714
               

               Cow position:
               chr6:49428471-49428806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               59, 50
               

               Conread position:
               403-709
               

               Cow position:
               chr6:49428243-49428549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 35
               
Show alignments to all cow chromosomes.