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Cow genome map

           
Conread name:
           
Ss1.1-rmed25c_n3.5
        

               
Conread position:
               
1-539
               

               
Cow position:
               
chr18:53560156-53560693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
318, 333
               

               
Conread position:
               
1-568
               

               
Cow position:
               
chr18:51766020-51765453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
522, 534
               

               
Conread position:
               
7-586
               

               
Cow position:
               
chr18:44398536-44397960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
8-398
               

               
Cow position:
               
chr18:43119834-43119445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
378, 372
               

               
Conread position:
               
8-402
               

               
Cow position:
               
chr18:40324311-40323918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
369, 0
               

               
Conread position:
               
8-439
               

               
Cow position:
               
chr18:50058798-50058369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
8-534
               

               
Cow position:
               
chr18:41198232-41198758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
8-556
               

               
Cow position:
               
chr18:50022334-50021783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
75, 82
               

               
Conread position:
               
8-561
               

               
Cow position:
               
chr18:42675084-42674531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
8-561
               

               
Cow position:
               
chr18:50083351-50083904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
8-567
               

               
Cow position:
               
chr18:49033145-49032586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-567
               

               
Cow position:
               
chr18:50048986-50048427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
8-568
               

               
Cow position:
               
chr18:42837699-42837139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-570
               

               
Cow position:
               
chr18:42837783-42837221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 52
               

               
Conread position:
               
8-570
               

               
Cow position:
               
chr18:51367945-51367384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 131
               

               
Conread position:
               
8-580
               

               
Cow position:
               
chr18:51812983-51812411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 161
               

               
Conread position:
               
8-624
               

               
Cow position:
               
chr18:42744396-42743779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 160
               

               
Conread position:
               
10-556
               

               
Cow position:
               
chr18:51752012-51751470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
141, 161
               

               
Conread position:
               
15-450
               

               
Cow position:
               
chr18:42792468-42792903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
220, 242
               

               
Conread position:
               
15-561
               

               
Cow position:
               
chr18:42791460-42792006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
15-569
               

               
Cow position:
               
chr18:42791964-42792518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
16-569
               

               
Cow position:
               
chr18:43167617-43168170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
47, 42
               

               
Conread position:
               
18-600
               

               
Cow position:
               
chr18:51789648-51789064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
20-567
               

               
Cow position:
               
chr18:43093505-43092958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-567
               

               
Cow position:
               
chr18:43167708-43168252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
21-573
               

               
Cow position:
               
chr18:43094076-43093541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
153, 27
               

               
Conread position:
               
22-465
               

               
Cow position:
               
chr18:51812381-51811938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
22-558
               

               
Cow position:
               
chr18:51789138-51788604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
129, 149
               

               
Conread position:
               
22-569
               

               
Cow position:
               
chr18:51752252-51751705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
129, 152
               

               
Conread position:
               
22-600
               

               
Cow position:
               
chr18:44398440-44397862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
25-568
               

               
Cow position:
               
chr18:50059703-50059162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
27-399
               

               
Cow position:
               
chr18:51812292-51811920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
27-480
               

               
Cow position:
               
chr18:44253803-44253351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
313, 303
               

               
Conread position:
               
27-567
               

               
Cow position:
               
chr18:41197663-41198203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 32
               

               
Conread position:
               
31-561
               

               
Cow position:
               
chr18:51400624-51401154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 134
               

               
Conread position:
               
31-561
               

               
Cow position:
               
chr18:52428397-52428927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 28
               

               
Conread position:
               
31-561
               

               
Cow position:
               
chr18:52433578-52434108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
31-570
               

               
Cow position:
               
chr18:51789549-51789010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
118, 134
               

               
Conread position:
               
31-570
               

               
Cow position:
               
chr18:52427809-52428348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
31-586
               

               
Cow position:
               
chr18:51368426-51367871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
31-586
               

               
Cow position:
               
chr18:51812708-51812153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
120, 134
               

               
Conread position:
               
31-586
               

               
Cow position:
               
chr18:52433158-52433713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
37-569
               

               
Cow position:
               
chr18:43175594-43175062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
38-305
               

               
Cow position:
               
chr18:52448131-52448397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
168, 253
               

               
Conread position:
               
38-385
               

               
Cow position:
               
chr18:51839126-51838779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
113, 120
               

               
Conread position:
               
38-561
               

               
Cow position:
               
chr18:44398340-44397817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
38-561
               

               
Cow position:
               
chr18:51839378-51838855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
219, 208
               

               
Conread position:
               
38-568
               

               
Cow position:
               
chr18:33064839-33064309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 193
               

               
Conread position:
               
38-568
               

               
Cow position:
               
chr18:43120392-43119863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 32
               

               
Conread position:
               
38-568
               

               
Cow position:
               
chr18:51765899-51765369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
45, 51
               

               
Conread position:
               
38-569
               

               
Cow position:
               
chr18:44254124-44253597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 132
               

               
Conread position:
               
38-569
               

               
Cow position:
               
chr18:52447543-52448074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 97
               

               
Conread position:
               
38-570
               

               
Cow position:
               
chr18:52447795-52448328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 97
               

               
Conread position:
               
38-579
               

               
Cow position:
               
chr18:51368083-51367543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 7
               

               
Conread position:
               
38-585
               

               
Cow position:
               
chr18:51812785-51812238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
38-586
               

               
Cow position:
               
chr18:52427732-52428280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 377
               

               
Conread position:
               
38-586
               

               
Cow position:
               
chr18:52433081-52433629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 286
               

               
Conread position:
               
38-587
               

               
Cow position:
               
chr18:51400379-51400928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
122, 116
               

               
Conread position:
               
38-599
               

               
Cow position:
               
chr18:41198010-41198573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 47
               

               
Conread position:
               
38-600
               

               
Cow position:
               
chr18:51812617-51812055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
38-600
               

               
Cow position:
               
chr18:52447123-52447685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
38-600
               

               
Cow position:
               
chr18:52447375-52447937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
38-610
               

               
Cow position:
               
chr18:51969524-51970079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
113, 99
               

               
Conread position:
               
39-360
               

               
Cow position:
               
chr18:42984788-42984467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
39-447
               

               
Cow position:
               
chr18:44184366-44183958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
39-456
               

               
Cow position:
               
chr18:14453272-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
39-547
               

               
Cow position:
               
chr18:43175004-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 51
               

               
Conread position:
               
39-556
               

               
Cow position:
               
chr18:44239941-44240458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
284, 274
               

               
Conread position:
               
39-569
               

               
Cow position:
               
chr18:40324532-40324002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
39-569
               

               
Cow position:
               
chr18:41949080-41948550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 46
               

               
Conread position:
               
39-569
               

               
Cow position:
               
chr18:42744533-42744003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
39-569
               

               
Cow position:
               
chr18:42744701-42744171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
39-569
               

               
Cow position:
               
chr18:42837920-42837390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
39-586
               

               
Cow position:
               
chr18:44153854-44153319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
309, 184
               

               
Conread position:
               
46-569
               

               
Cow position:
               
chr18:40086744-40086220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
46-600
               

               
Cow position:
               
chr18:50848107-50848660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
51-576
               

               
Cow position:
               
chr18:44184942-44184418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
52-289
               

               
Cow position:
               
chr18:43053429-43053193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
29, 7
               

               
Conread position:
               
52-586
               

               
Cow position:
               
chr18:44398157-44397624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
52-600
               

               
Cow position:
               
chr18:44398241-44397694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
536, 9
               

               
Conread position:
               
53-367
               

               
Cow position:
               
chr18:41198445-41198759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
12, 6
               

               
Conread position:
               
53-394
               

               
Cow position:
               
chr18:33092824-33092483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
53-414
               

               
Cow position:
               
chr18:50048688-50048328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
120, 7
               

               
Conread position:
               
53-417
               

               
Cow position:
               
chr18:41948646-41948284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
320, 0
               

               
Conread position:
               
53-449
               

               
Cow position:
               
chr18:50246444-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
53-450
               

               
Cow position:
               
chr18:40075305-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
112, 104
               

               
Conread position:
               
53-450
               

               
Cow position:
               
chr18:50083901-50084300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
179, 7
               

               
Conread position:
               
53-453
               

               
Cow position:
               
chr18:50271743-50272143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
268, 276
               

               
Conread position:
               
53-457
               

               
Cow position:
               
chr18:50083816-50084220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
186, 196
               

               
Conread position:
               
53-461
               

               
Cow position:
               
chr18:44253202-44252805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
53-465
               

               
Cow position:
               
chr18:33093075-33092664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
98, 7
               

               
Conread position:
               
53-467
               

               
Cow position:
               
chr18:42827518-42827932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 357
               

               
Conread position:
               
53-478
               

               
Cow position:
               
chr18:53635426-53635002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
393, 0
               

               
Conread position:
               
53-501
               

               
Cow position:
               
chr18:53636013-53635566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
289, 6
               

               
Conread position:
               
53-534
               

               
Cow position:
               
chr18:50295387-50295867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
106, 6
               

               
Conread position:
               
53-535
               

               
Cow position:
               
chr18:14453822-14453340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
53-541
               

               
Cow position:
               
chr18:42827434-42827922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 97
               

               
Conread position:
               
53-555
               

               
Cow position:
               
chr18:49033268-49032766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
280, 263
               

               
Conread position:
               
53-558
               

               
Cow position:
               
chr18:49032595-49032091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
28, 6
               

               
Conread position:
               
53-558
               

               
Cow position:
               
chr18:56330073-56329568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
53-561
               

               
Cow position:
               
chr18:41198193-41198701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
53-561
               

               
Cow position:
               
chr18:50099257-50099765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
98, 112
               

               
Conread position:
               
53-561
               

               
Cow position:
               
chr18:55523338-55523846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
53-567
               

               
Cow position:
               
chr18:40306619-40307133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
117, 111
               

               
Conread position:
               
53-567
               

               
Cow position:
               
chr18:42790910-42791424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
53-567
               

               
Cow position:
               
chr18:42791247-42791760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
186, 7
               

               
Conread position:
               
53-567
               

               
Cow position:
               
chr18:43167822-43168336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
98, 107
               

               
Conread position:
               
53-567
               

               
Cow position:
               
chr18:50049109-50048595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
53-567
               

               
Cow position:
               
chr18:56329653-56329139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
442, 435
               

               
Conread position:
               
53-568
               

               
Cow position:
               
chr18:49033184-49032669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
53-569
               

               
Cow position:
               
chr18:41197857-41198373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 86
               

               
Conread position:
               
53-569
               

               
Cow position:
               
chr18:42792170-42792686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
185, 197
               

               
Conread position:
               
53-569
               

               
Cow position:
               
chr18:43175241-43174726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 6
               

               
Conread position:
               
53-569
               

               
Cow position:
               
chr18:50848365-50848881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 359
               

               
Conread position:
               
53-569
               

               
Cow position:
               
chr18:53525723-53526238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 8
               

               
Conread position:
               
53-569
               

               
Cow position:
               
chr18:53586633-53586117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
185, 193
               

               
Conread position:
               
53-569
               

               
Cow position:
               
chr18:54966981-54967497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
132, 123
               

               
Conread position:
               
53-570
               

               
Cow position:
               
chr18:42791750-42792267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
53-570
               

               
Cow position:
               
chr18:43093304-43092788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 6
               

               
Conread position:
               
53-570
               

               
Cow position:
               
chr18:50848869-50849386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
184, 203
               

               
Conread position:
               
53-570
               

               
Cow position:
               
chr18:56316079-56316596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
104, 112
               

               
Conread position:
               
53-571
               

               
Cow position:
               
chr18:51368573-51368054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
53-579
               

               
Cow position:
               
chr18:33064236-33063710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 196
               

               
Conread position:
               
53-580
               

               
Cow position:
               
chr18:42790994-42791521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
53-580
               

               
Cow position:
               
chr18:50848534-50849060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
428, 7
               

               
Conread position:
               
53-586
               

               
Cow position:
               
chr18:14453989-14453457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 6
               

               
Conread position:
               
53-586
               

               
Cow position:
               
chr18:41197605-41198138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 6
               

               
Conread position:
               
53-586
               

               
Cow position:
               
chr18:52446970-52447503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
53-588
               

               
Cow position:
               
chr18:33064740-33064205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
301, 291
               

               
Conread position:
               
53-601
               

               
Cow position:
               
chr18:42985193-42984646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 6
               

               
Conread position:
               
55-317
               

               
Cow position:
               
chr18:1418286-1418548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
102, 131
               

               
Conread position:
               
55-585
               

               
Cow position:
               
chr18:51752302-51751773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
180, 13
               

               
Conread position:
               
56-567
               

               
Cow position:
               
chr18:1418035-1418546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
59-569
               

               
Cow position:
               
chr18:43093716-43093208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
61-384
               

               
Cow position:
               
chr18:56247363-56247043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
318, 219
               

               
Conread position:
               
61-401
               

               
Cow position:
               
chr18:33092900-33092560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
61-448
               

               
Cow position:
               
chr18:42837478-42837091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
61-455
               

               
Cow position:
               
chr18:41948722-41948328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
61-561
               

               
Cow position:
               
chr18:42792346-42792846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
90, 113
               

               
Conread position:
               
61-561
               

               
Cow position:
               
chr18:50848961-50849462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
113, 101
               

               
Conread position:
               
61-565
               

               
Cow position:
               
chr18:56494050-56494551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
178, 188
               

               
Conread position:
               
61-567
               

               
Cow position:
               
chr18:40075061-40075567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
90, 95
               

               
Conread position:
               
61-567
               

               
Cow position:
               
chr18:42791842-42792348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
61-567
               

               
Cow position:
               
chr18:42792094-42792600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
61-567
               

               
Cow position:
               
chr18:42792262-42792768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 197
               

               
Conread position:
               
61-567
               

               
Cow position:
               
chr18:50059081-50058575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
113, 101
               

               
Conread position:
               
61-567
               

               
Cow position:
               
chr18:53635670-53635164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
275, 281
               

               
Conread position:
               
61-567
               

               
Cow position:
               
chr18:56128495-56129001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
278, 268
               

               
Conread position:
               
61-568
               

               
Cow position:
               
chr18:53635502-53634996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
112, 104
               

               
Conread position:
               
61-569
               

               
Cow position:
               
chr18:41197781-41198289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
61-569
               

               
Cow position:
               
chr18:41948890-41948382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
61-569
               

               
Cow position:
               
chr18:41949226-41948718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 95
               

               
Conread position:
               
61-569
               

               
Cow position:
               
chr18:42985438-42984930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 90
               

               
Conread position:
               
61-569
               

               
Cow position:
               
chr18:43022697-43022189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
61-569
               

               
Cow position:
               
chr18:50059501-50058993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
179, 196
               

               
Conread position:
               
61-569
               

               
Cow position:
               
chr18:50848205-50848713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
90, 115
               

               
Conread position:
               
61-569
               

               
Cow position:
               
chr18:53509276-53509784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
96, 104
               

               
Conread position:
               
61-572
               

               
Cow position:
               
chr18:53559964-53560475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
112, 99
               

               
Conread position:
               
61-580
               

               
Cow position:
               
chr18:50848625-50849144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
61-580
               

               
Cow position:
               
chr18:54979682-54980201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
184, 195
               

               
Conread position:
               
61-586
               

               
Cow position:
               
chr18:43093548-43093023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 188
               

               
Conread position:
               
61-597
               

               
Cow position:
               
chr18:51813014-51812481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
62-447
               

               
Cow position:
               
chr18:44397896-44397511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
62-461
               

               
Cow position:
               
chr18:50058828-50058431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
177, 187
               

               
Conread position:
               
62-534
               

               
Cow position:
               
chr18:43168083-43168553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
462, 0
               

               
Conread position:
               
62-558
               

               
Cow position:
               
chr18:42791339-42791835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
111, 100
               

               
Conread position:
               
62-567
               

               
Cow position:
               
chr18:52447651-52448156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
62-569
               

               
Cow position:
               
chr18:43093379-43092872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 181
               

               
Conread position:
               
62-570
               

               
Cow position:
               
chr18:52427588-52428096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
62-572
               

               
Cow position:
               
chr18:42675198-42674689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
62-586
               

               
Cow position:
               
chr18:52427924-52428448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 186
               

               
Conread position:
               
62-586
               

               
Cow position:
               
chr18:52432937-52433461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
62-600
               

               
Cow position:
               
chr18:55018003-55018541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
353, 347
               

               
Conread position:
               
65-569
               

               
Cow position:
               
chr18:51874021-51874518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
86, 93
               

               
Conread position:
               
67-561
               

               
Cow position:
               
chr18:42791092-42791586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 264
               

               
Conread position:
               
68-561
               

               
Cow position:
               
chr18:53498014-53498511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 92
               

               
Conread position:
               
68-568
               

               
Cow position:
               
chr18:49032497-49031997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
461, 471
               

               
Conread position:
               
69-585
               

               
Cow position:
               
chr18:56330225-56329709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
60, 66
               

               
Conread position:
               
70-561
               

               
Cow position:
               
chr18:50049007-50048517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
71-366
               

               
Cow position:
               
chr18:50021677-50021381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
172, 164
               

               
Conread position:
               
71-418
               

               
Cow position:
               
chr18:51874356-51874703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
89, 80
               

               
Conread position:
               
71-447
               

               
Cow position:
               
chr18:53560395-53560770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
71-455
               

               
Cow position:
               
chr18:1418219-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
265, 18
               

               
Conread position:
               
71-456
               

               
Cow position:
               
chr18:33063966-33063581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
96, 90
               

               
Conread position:
               
71-579
               

               
Cow position:
               
chr18:33064386-33063878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
78, 95
               

               
Conread position:
               
71-600
               

               
Cow position:
               
chr18:22634688-22635217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
95, 85
               

               
Conread position:
               
72-466
               

               
Cow position:
               
chr18:51400833-51401227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
72-555
               

               
Cow position:
               
chr18:52428522-52429004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
72-555
               

               
Cow position:
               
chr18:52433703-52434185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
72-586
               

               
Cow position:
               
chr18:43120190-43119676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
72-586
               

               
Cow position:
               
chr18:52428018-52428532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
72-586
               

               
Cow position:
               
chr18:52428270-52428784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
72-586
               

               
Cow position:
               
chr18:52433451-52433965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
72-597
               

               
Cow position:
               
chr18:51789760-51789238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 97
               

               
Conread position:
               
73-569
               

               
Cow position:
               
chr18:51400498-51400994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 266
               

               
Conread position:
               
73-586
               

               
Cow position:
               
chr18:52428187-52428700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
73-586
               

               
Cow position:
               
chr18:52433368-52433881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
73-600
               

               
Cow position:
               
chr18:40324582-40324055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 333
               

               
Conread position:
               
74-461
               

               
Cow position:
               
chr18:50058905-50058513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 270
               

               
Conread position:
               
74-496
               

               
Cow position:
               
chr18:43048677-43048256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
6, 16
               

               
Conread position:
               
74-567
               

               
Cow position:
               
chr18:42791687-42792180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
178, 172
               

               
Conread position:
               
74-568
               

               
Cow position:
               
chr18:51766031-51765537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
77, 84
               

               
Conread position:
               
74-569
               

               
Cow position:
               
chr18:42960080-42959594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
82, 87
               

               
Conread position:
               
74-569
               

               
Cow position:
               
chr18:52447747-52448242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
74-570
               

               
Cow position:
               
chr18:42744414-42743918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
466, 453
               

               
Conread position:
               
74-586
               

               
Cow position:
               
chr18:52447495-52448007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 86
               

               
Conread position:
               
74-600
               

               
Cow position:
               
chr18:42744582-42744056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
74-600
               

               
Cow position:
               
chr18:44253504-44252992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
254, 129
               

               
Conread position:
               
74-600
               

               
Cow position:
               
chr18:54979947-54980473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
345, 352
               

               
Conread position:
               
75-570
               

               
Cow position:
               
chr18:52433034-52433529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
75-572
               

               
Cow position:
               
chr18:55523780-55524276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
327, 340
               

               
Conread position:
               
75-586
               

               
Cow position:
               
chr18:52427685-52428196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
401, 424
               

               
Conread position:
               
76-540
               

               
Cow position:
               
chr18:33064045-33063581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 253
               

               
Conread position:
               
77-567
               

               
Cow position:
               
chr18:33064296-33063806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-568
               

               
Cow position:
               
chr18:51367708-51367218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
77-569
               

               
Cow position:
               
chr18:43023016-43022525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 11
               

               
Conread position:
               
77-580
               

               
Cow position:
               
chr18:43175049-43174547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 12
               

               
Conread position:
               
77-586
               

               
Cow position:
               
chr18:44240316-44240824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
77-600
               

               
Cow position:
               
chr18:44239812-44240334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
494, 12
               

               
Conread position:
               
79-569
               

               
Cow position:
               
chr18:49032653-49032164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
265, 10
               

               
Conread position:
               
80-523
               

               
Cow position:
               
chr18:44397961-44397519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
239, 9
               

               
Conread position:
               
80-570
               

               
Cow position:
               
chr18:40324742-40324253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
80-574
               

               
Cow position:
               
chr18:43175130-43174638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 9
               

               
Conread position:
               
80-580
               

               
Cow position:
               
chr18:43168018-43168517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 9
               

               
Conread position:
               
81-371
               

               
Cow position:
               
chr18:42674675-42674387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
253, 0
               

               
Conread position:
               
82-579
               

               
Cow position:
               
chr18:33064966-33064466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
82-600
               

               
Cow position:
               
chr18:43175468-43174947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 517
               

               
Conread position:
               
82-601
               

               
Cow position:
               
chr18:42985504-42984982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
14, 156
               

               
Conread position:
               
83-485
               

               
Cow position:
               
chr18:50022175-50021770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
110, 164
               

               
Conread position:
               
83-547
               

               
Cow position:
               
chr18:42674844-42674377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 322
               

               
Conread position:
               
83-561
               

               
Cow position:
               
chr18:55066885-55066404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
83-567
               

               
Cow position:
               
chr18:1417810-1418294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
367, 357
               

               
Conread position:
               
83-567
               

               
Cow position:
               
chr18:52012468-52011983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
83-567
               

               
Cow position:
               
chr18:52447333-52447820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
83-569
               

               
Cow position:
               
chr18:40074915-40075401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 113
               

               
Conread position:
               
83-569
               

               
Cow position:
               
chr18:53587110-53586621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
83-579
               

               
Cow position:
               
chr18:55017772-55018268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
83-580
               

               
Cow position:
               
chr18:41949291-41948791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 409
               

               
Conread position:
               
84-567
               

               
Cow position:
               
chr18:1417895-1418378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
90, 78
               

               
Conread position:
               
84-569
               

               
Cow position:
               
chr18:50098952-50099437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
149, 164
               

               
Conread position:
               
84-569
               

               
Cow position:
               
chr18:55067049-55066564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
155, 165
               

               
Conread position:
               
84-573
               

               
Cow position:
               
chr18:42744740-42744252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 240
               

               
Conread position:
               
84-579
               

               
Cow position:
               
chr18:53559735-53560230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
70, 80
               

               
Conread position:
               
84-585
               

               
Cow position:
               
chr18:53498372-53498873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
77, 86
               

               
Conread position:
               
84-591
               

               
Cow position:
               
chr18:1417979-1418486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
198, 190
               

               
Conread position:
               
85-561
               

               
Cow position:
               
chr18:42960237-42959761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
229, 241
               

               
Conread position:
               
85-567
               

               
Cow position:
               
chr18:50059393-50058911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
85-600
               

               
Cow position:
               
chr18:55018278-55018794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
87-450
               

               
Cow position:
               
chr18:54993640-54994000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
153, 140
               

               
Conread position:
               
87-561
               

               
Cow position:
               
chr18:50083346-50083820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
225, 241
               

               
Conread position:
               
87-567
               

               
Cow position:
               
chr18:50271525-50272005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
67, 78
               

               
Conread position:
               
87-569
               

               
Cow position:
               
chr18:44154387-44153906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
74, 79
               

               
Conread position:
               
87-600
               

               
Cow position:
               
chr18:54993220-54993733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
424, 387
               

               
Conread position:
               
88-480
               

               
Cow position:
               
chr18:43022418-43022026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
63, 72
               

               
Conread position:
               
88-574
               

               
Cow position:
               
chr18:51752102-51751616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
89-320
               

               
Cow position:
               
chr18:42959654-42959423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
89-339
               

               
Cow position:
               
chr18:51873766-51874016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
89-394
               

               
Cow position:
               
chr18:50245975-50246280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
139, 158
               

               
Conread position:
               
89-450
               

               
Cow position:
               
chr18:53509472-53509833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
150, 160
               

               
Conread position:
               
89-461
               

               
Cow position:
               
chr18:50250984-50251353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
84, 61
               

               
Conread position:
               
89-480
               

               
Cow position:
               
chr18:52011957-52011566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 78
               

               
Conread position:
               
89-483
               

               
Cow position:
               
chr18:42792458-42792853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
319, 314
               

               
Conread position:
               
89-496
               

               
Cow position:
               
chr18:55523878-55524285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
150, 158
               

               
Conread position:
               
89-540
               

               
Cow position:
               
chr18:56316283-56316734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
155, 177
               

               
Conread position:
               
89-549
               

               
Cow position:
               
chr18:49032980-49032520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
89-556
               

               
Cow position:
               
chr18:43119921-43119454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 63
               

               
Conread position:
               
89-558
               

               
Cow position:
               
chr18:50271695-50272163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
150, 160
               

               
Conread position:
               
89-561
               

               
Cow position:
               
chr18:50099461-50099933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
150, 159
               

               
Conread position:
               
89-561
               

               
Cow position:
               
chr18:50251068-50251537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
150, 79
               

               
Conread position:
               
89-561
               

               
Cow position:
               
chr18:55066960-55066488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
71, 76
               

               
Conread position:
               
89-566
               

               
Cow position:
               
chr18:50271443-50271920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
144, 160
               

               
Conread position:
               
89-567
               

               
Cow position:
               
chr18:50048821-50048343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
148, 140
               

               
Conread position:
               
89-567
               

               
Cow position:
               
chr18:50848737-50849215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
337, 325
               

               
Conread position:
               
89-567
               

               
Cow position:
               
chr18:56329365-56328887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
237, 253
               

               
Conread position:
               
89-568
               

               
Cow position:
               
chr18:50083768-50084246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
89-569
               

               
Cow position:
               
chr18:33064452-33063972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
148, 160
               

               
Conread position:
               
89-569
               

               
Cow position:
               
chr18:42837954-42837474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
89-569
               

               
Cow position:
               
chr18:42985242-42984762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
89-569
               

               
Cow position:
               
chr18:43022501-43022021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 71
               

               
Conread position:
               
89-569
               

               
Cow position:
               
chr18:43120005-43119525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
89-569
               

               
Cow position:
               
chr18:44240075-44240555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
63, 69
               

               
Conread position:
               
89-569
               

               
Cow position:
               
chr18:51812398-51811918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
89-571
               

               
Cow position:
               
chr18:55523626-55524108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
64, 96
               

               
Conread position:
               
89-576
               

               
Cow position:
               
chr18:53525926-53526413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
150, 160
               

               
Conread position:
               
89-578
               

               
Cow position:
               
chr18:44154217-44153736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
238, 0
               

               
Conread position:
               
89-580
               

               
Cow position:
               
chr18:44184484-44183993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
89-585
               

               
Cow position:
               
chr18:50083684-50084180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
150, 159
               

               
Conread position:
               
89-586
               

               
Cow position:
               
chr18:42674919-42674422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 138
               

               
Conread position:
               
89-586
               

               
Cow position:
               
chr18:43022585-43022088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 63
               

               
Conread position:
               
89-586
               

               
Cow position:
               
chr18:44184820-44184323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 75
               

               
Conread position:
               
89-586
               

               
Cow position:
               
chr18:44240243-44240740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
76, 63
               

               
Conread position:
               
89-590
               

               
Cow position:
               
chr18:40306235-40306735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
59, 66
               

               
Conread position:
               
89-593
               

               
Cow position:
               
chr18:51789155-51788653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
89-600
               

               
Cow position:
               
chr18:49033316-49032805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
85, 76
               

               
Conread position:
               
89-600
               

               
Cow position:
               
chr18:51368116-51367606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
89-600
               

               
Cow position:
               
chr18:51789323-51788812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
85, 78
               

               
Conread position:
               
89-600
               

               
Cow position:
               
chr18:51812818-51812307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 67
               

               
Conread position:
               
89-600
               

               
Cow position:
               
chr18:51969089-51969582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 67
               

               
Conread position:
               
89-605
               

               
Cow position:
               
chr18:51765512-51764998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 66
               

               
Conread position:
               
91-566
               

               
Cow position:
               
chr18:56248174-56247690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
322, 12
               

               
Conread position:
               
92-586
               

               
Cow position:
               
chr18:44154469-44153973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 68
               

               
Conread position:
               
93-568
               

               
Cow position:
               
chr18:56128107-56128582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
145, 156
               

               
Conread position:
               
94-600
               

               
Cow position:
               
chr18:50059133-50058626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 153
               

               
Conread position:
               
95-493
               

               
Cow position:
               
chr18:53586423-53586025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
96-569
               

               
Cow position:
               
chr18:43167948-43168422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 40
               

               
Conread position:
               
97-407
               

               
Cow position:
               
chr18:51839151-51838841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
97-418
               

               
Cow position:
               
chr18:51873691-51874011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
97-561
               

               
Cow position:
               
chr18:51839487-51839023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
52, 63
               

               
Conread position:
               
97-567
               

               
Cow position:
               
chr18:41198153-41198623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
380, 370
               

               
Conread position:
               
97-580
               

               
Cow position:
               
chr18:51789651-51789168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 59
               

               
Conread position:
               
98-567
               

               
Cow position:
               
chr18:56330113-56329643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
101-569
               

               
Cow position:
               
chr18:56493838-56494306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
101-602
               

               
Cow position:
               
chr18:42960305-42959804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 54
               

               
Conread position:
               
102-459
               

               
Cow position:
               
chr18:53509569-53509926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
58, 63
               

               
Conread position:
               
102-459
               

               
Cow position:
               
chr18:55018211-55018568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
147, 142
               

               
Conread position:
               
102-464
               

               
Cow position:
               
chr18:43048733-43048371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
212, 222
               

               
Conread position:
               
102-480
               

               
Cow position:
               
chr18:40306584-40306962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 61
               

               
Conread position:
               
102-522
               

               
Cow position:
               
chr18:49021730-49022151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
136, 146
               

               
Conread position:
               
102-523
               

               
Cow position:
               
chr18:56329268-56328847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
102-529
               

               
Cow position:
               
chr18:40306920-40307347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
71, 49
               

               
Conread position:
               
102-561
               

               
Cow position:
               
chr18:50049144-50048685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
56, 63
               

               
Conread position:
               
102-561
               

               
Cow position:
               
chr18:52447103-52447562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
102-561
               

               
Cow position:
               
chr18:54992899-54993358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
146, 142
               

               
Conread position:
               
102-565
               

               
Cow position:
               
chr18:53610136-53609674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
53, 72
               

               
Conread position:
               
102-566
               

               
Cow position:
               
chr18:50246156-50246620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
137, 146
               

               
Conread position:
               
102-567
               

               
Cow position:
               
chr18:40075186-40075651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
50, 63
               

               
Conread position:
               
102-567
               

               
Cow position:
               
chr18:49022809-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
102-567
               

               
Cow position:
               
chr18:50022324-50021856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
131, 156
               

               
Conread position:
               
102-567
               

               
Cow position:
               
chr18:50246324-50246789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 84
               

               
Conread position:
               
102-567
               

               
Cow position:
               
chr18:51368271-51367807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 228
               

               
Conread position:
               
102-567
               

               
Cow position:
               
chr18:56329436-56328971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
102-567
               

               
Cow position:
               
chr18:56329856-56329391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 83
               

               
Conread position:
               
102-568
               

               
Cow position:
               
chr18:40306752-40307218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
72, 63
               

               
Conread position:
               
102-568
               

               
Cow position:
               
chr18:49022725-49023191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
102-568
               

               
Cow position:
               
chr18:53560089-53560555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
223, 229
               

               
Conread position:
               
102-569
               

               
Cow position:
               
chr18:42837773-42837306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
102-569
               

               
Cow position:
               
chr18:49032883-49032416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
391, 410
               

               
Conread position:
               
102-571
               

               
Cow position:
               
chr18:56434376-56434844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 147
               

               
Conread position:
               
102-573
               

               
Cow position:
               
chr18:41197990-41198460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
102-585
               

               
Cow position:
               
chr18:53610220-53609737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
217, 226
               

               
Conread position:
               
102-586
               

               
Cow position:
               
chr18:51789394-51788910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
102-586
               

               
Cow position:
               
chr18:56247734-56247258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
470, 207
               

               
Conread position:
               
102-600
               

               
Cow position:
               
chr18:54967366-54967861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
59, 68
               

               
Conread position:
               
102-600
               

               
Cow position:
               
chr18:54992731-54993229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
324, 307
               

               
Conread position:
               
102-604
               

               
Cow position:
               
chr18:54967534-54968033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
390, 164
               

               
Conread position:
               
103-568
               

               
Cow position:
               
chr18:51766087-51765621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
14, 5
               

               
Conread position:
               
103-569
               

               
Cow position:
               
chr18:54967866-54968332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
103-569
               

               
Cow position:
               
chr18:55008805-55009273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
17, 148
               

               
Conread position:
               
104-315
               

               
Cow position:
               
chr18:51765161-51764950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 63
               

               
Conread position:
               
104-418
               

               
Cow position:
               
chr18:51874305-51874619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
135, 125
               

               
Conread position:
               
104-460
               

               
Cow position:
               
chr18:50099980-50100335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
50, 70
               

               
Conread position:
               
104-561
               

               
Cow position:
               
chr18:50099560-50100017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
135, 145
               

               
Conread position:
               
104-567
               

               
Cow position:
               
chr18:50021899-50021433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
158, 220
               

               
Conread position:
               
104-569
               

               
Cow position:
               
chr18:40324803-40324338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
104-569
               

               
Cow position:
               
chr18:51789224-51788759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
68, 58
               

               
Conread position:
               
104-569
               

               
Cow position:
               
chr18:51812467-51812002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
104-573
               

               
Cow position:
               
chr18:14453855-14453387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
274, 265
               

               
Conread position:
               
104-573
               

               
Cow position:
               
chr18:51789812-51789344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
47, 54
               

               
Conread position:
               
104-580
               

               
Cow position:
               
chr18:41948931-41948455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 226
               

               
Conread position:
               
104-586
               

               
Cow position:
               
chr18:40086183-40085708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
104-586
               

               
Cow position:
               
chr18:41949099-41948617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 54
               

               
Conread position:
               
104-600
               

               
Cow position:
               
chr18:51765581-51765085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
160, 166
               

               
Conread position:
               
107-561
               

               
Cow position:
               
chr18:42827404-42827858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
67, 54
               

               
Conread position:
               
109-418
               

               
Cow position:
               
chr18:51367509-51367200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
109-459
               

               
Cow position:
               
chr18:44240515-44240866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
50, 43
               

               
Conread position:
               
109-477
               

               
Cow position:
               
chr18:40075025-40075393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 55
               

               
Conread position:
               
109-567
               

               
Cow position:
               
chr18:41197577-41198035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-567
               

               
Cow position:
               
chr18:53636042-53635584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
399, 393
               

               
Conread position:
               
109-568
               

               
Cow position:
               
chr18:42675319-42674860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 55
               

               
Conread position:
               
109-568
               

               
Cow position:
               
chr18:50099145-50099604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
119, 138
               

               
Conread position:
               
109-569
               

               
Cow position:
               
chr18:51969343-51969801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 47
               

               
Conread position:
               
109-580
               

               
Cow position:
               
chr18:40324882-40324411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-582
               

               
Cow position:
               
chr18:56247559-56247096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
464, 40
               

               
Conread position:
               
110-465
               

               
Cow position:
               
chr18:44253313-44252959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
196, 0
               

               
Conread position:
               
110-558
               

               
Cow position:
               
chr18:49022231-49022677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
213, 209
               

               
Conread position:
               
112-365
               

               
Cow position:
               
chr18:43022226-43021973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
112-417
               

               
Cow position:
               
chr18:42959715-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-502
               

               
Cow position:
               
chr18:56247475-56247092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
112-523
               

               
Cow position:
               
chr18:42984883-42984472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-534
               

               
Cow position:
               
chr18:14453283-14452861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
112-555
               

               
Cow position:
               
chr18:44398014-44397571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-557
               

               
Cow position:
               
chr18:44154110-44153672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
112-568
               

               
Cow position:
               
chr18:43175267-43174811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-568
               

               
Cow position:
               
chr18:50250924-50251376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
117, 34
               

               
Conread position:
               
112-569
               

               
Cow position:
               
chr18:40086091-40085641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
112-569
               

               
Cow position:
               
chr18:40324375-40323919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
424, 0
               

               
Conread position:
               
112-569
               

               
Cow position:
               
chr18:41949343-41948886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-569
               

               
Cow position:
               
chr18:42984967-42984510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
112-569
               

               
Cow position:
               
chr18:44184629-44184172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 53
               

               
Conread position:
               
112-570
               

               
Cow position:
               
chr18:51839388-51838930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
112-574
               

               
Cow position:
               
chr18:42675232-42674770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-579
               

               
Cow position:
               
chr18:43023066-43022599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
112-580
               

               
Cow position:
               
chr18:43175351-43174883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-580
               

               
Cow position:
               
chr18:44184545-44184077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
377, 382
               

               
Conread position:
               
112-583
               

               
Cow position:
               
chr18:40086509-40086038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
388, 303
               

               
Conread position:
               
112-585
               

               
Cow position:
               
chr18:49033377-49032904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
61, 49
               

               
Conread position:
               
112-586
               

               
Cow position:
               
chr18:42985051-42984577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
112-586
               

               
Cow position:
               
chr18:44253886-44253412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-600
               

               
Cow position:
               
chr18:52428394-52428882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
474, 484
               

               
Conread position:
               
112-600
               

               
Cow position:
               
chr18:52433575-52434063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
427, 422
               

               
Conread position:
               
113-449
               

               
Cow position:
               
chr18:43022309-43021973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
113-465
               

               
Cow position:
               
chr18:51765320-51764968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
113-533
               

               
Cow position:
               
chr18:44184376-44183956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
136, 130
               

               
Conread position:
               
113-561
               

               
Cow position:
               
chr18:40086598-40086146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
44, 404
               

               
Conread position:
               
113-569
               

               
Cow position:
               
chr18:40306343-40306799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
202, 209
               

               
Conread position:
               
113-580
               

               
Cow position:
               
chr18:44253801-44253335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
298, 283
               

               
Conread position:
               
114-569
               

               
Cow position:
               
chr18:56247808-56247359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 231
               

               
Conread position:
               
115-580
               

               
Cow position:
               
chr18:50848343-50848808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
142, 137
               

               
Conread position:
               
118-567
               

               
Cow position:
               
chr18:42985549-42985100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 206
               

               
Conread position:
               
119-523
               

               
Cow position:
               
chr18:55066762-55066358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 78
               

               
Conread position:
               
119-567
               

               
Cow position:
               
chr18:40306181-40306629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
318, 294
               

               
Conread position:
               
119-568
               

               
Cow position:
               
chr18:54993168-54993616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
116, 125
               

               
Conread position:
               
119-569
               

               
Cow position:
               
chr18:42985296-42984846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
119-569
               

               
Cow position:
               
chr18:53560358-53560804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
121, 130
               

               
Conread position:
               
119-569
               

               
Cow position:
               
chr18:53586483-53586033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
55, 49
               

               
Conread position:
               
119-572
               

               
Cow position:
               
chr18:53559938-53560391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
119-586
               

               
Cow position:
               
chr18:52427561-52428028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
235, 213
               

               
Conread position:
               
119-586
               

               
Cow position:
               
chr18:52432910-52433377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-586
               

               
Cow position:
               
chr18:56434141-56434608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-588
               

               
Cow position:
               
chr18:54979908-54980377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
392, 355
               

               
Conread position:
               
120-535
               

               
Cow position:
               
chr18:40075288-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
120-586
               

               
Cow position:
               
chr18:14454007-14453541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
455, 440
               

               
Conread position:
               
121-571
               

               
Cow position:
               
chr18:54980162-54980611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
116, 128
               

               
Conread position:
               
121-571
               

               
Cow position:
               
chr18:54993506-54993954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
118, 125
               

               
Conread position:
               
121-573
               

               
Cow position:
               
chr18:49022494-49022943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 46
               

               
Conread position:
               
121-579
               

               
Cow position:
               
chr18:54966881-54967339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
380, 353
               

               
Conread position:
               
121-586
               

               
Cow position:
               
chr18:41197505-41197970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
122-453
               

               
Cow position:
               
chr18:53636113-53635782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 43
               

               
Conread position:
               
125-561
               

               
Cow position:
               
chr18:51400298-51400734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 35
               

               
Conread position:
               
125-567
               

               
Cow position:
               
chr18:51874160-51874600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
26, 36
               

               
Conread position:
               
125-600
               

               
Cow position:
               
chr18:44239943-44240418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 372
               

               
Conread position:
               
125-600
               

               
Cow position:
               
chr18:54993090-54993565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
195, 203
               

               
Conread position:
               
127-570
               

               
Cow position:
               
chr18:51766143-51765703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
131-569
               

               
Cow position:
               
chr18:42675548-42675111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
133-567
               

               
Cow position:
               
chr18:42675379-42674945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-567
               

               
Cow position:
               
chr18:50295382-50295816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
106, 117
               

               
Conread position:
               
133-568
               

               
Cow position:
               
chr18:33093080-33092645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-585
               

               
Cow position:
               
chr18:56128651-56129103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
186, 191
               

               
Conread position:
               
133-586
               

               
Cow position:
               
chr18:51839535-51839082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
442, 437
               

               
Conread position:
               
134-561
               

               
Cow position:
               
chr18:54979419-54979846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
134-567
               

               
Cow position:
               
chr18:50083309-50083742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
134-567
               

               
Cow position:
               
chr18:56329656-56329223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
134-569
               

               
Cow position:
               
chr18:40306532-40306967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
106, 113
               

               
Conread position:
               
134-590
               

               
Cow position:
               
chr18:40306868-40307323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
160, 144
               

               
Conread position:
               
134-600
               

               
Cow position:
               
chr18:54992679-54993145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
135-480
               

               
Cow position:
               
chr18:43094131-43093789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
135-566
               

               
Cow position:
               
chr18:50295216-50295647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
136-569
               

               
Cow position:
               
chr18:53587225-53586789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 128
               

               
Conread position:
               
137-579
               

               
Cow position:
               
chr18:33065076-33064634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
85, 94
               

               
Conread position:
               
138-569
               

               
Cow position:
               
chr18:44184941-44184508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 197
               

               
Conread position:
               
139-373
               

               
Cow position:
               
chr18:43053427-43053193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-599
               

               
Cow position:
               
chr18:42790841-42791288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
342, 332
               

               
Conread position:
               
153-522
               

               
Cow position:
               
chr18:56248274-56247912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
153-600
               

               
Cow position:
               
chr18:43175718-43175283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
155-579
               

               
Cow position:
               
chr18:40086972-40086552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
156-569
               

               
Cow position:
               
chr18:44154489-44154073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 168
               

               
Conread position:
               
157-567
               

               
Cow position:
               
chr18:42675439-42675029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
165, 177
               

               
Conread position:
               
158-569
               

               
Cow position:
               
chr18:43023104-43022693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
159-569
               

               
Cow position:
               
chr18:44239725-44240135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
200, 215
               

               
Conread position:
               
159-569
               

               
Cow position:
               
chr18:56316017-56316427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
62, 72
               

               
Conread position:
               
159-580
               

               
Cow position:
               
chr18:42837968-42837547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
163-569
               

               
Cow position:
               
chr18:42985588-42985182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 167
               

               
Conread position:
               
163-586
               

               
Cow position:
               
chr18:52447332-52447755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
168-586
               

               
Cow position:
               
chr18:14454043-14453625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
409, 395
               

               
Conread position:
               
169-534
               

               
Cow position:
               
chr18:50059729-50059364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
171-600
               

               
Cow position:
               
chr18:55008707-55009136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
58, 75
               

               
Conread position:
               
172-501
               

               
Cow position:
               
chr18:42959739-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
172-561
               

               
Cow position:
               
chr18:44253335-44252947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
182, 158
               

               
Conread position:
               
172-561
               

               
Cow position:
               
chr18:50099880-50100269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
65, 75
               

               
Conread position:
               
172-561
               

               
Cow position:
               
chr18:50245974-50246363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 57
               

               
Conread position:
               
172-576
               

               
Cow position:
               
chr18:44184653-44184249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 330
               

               
Conread position:
               
172-582
               

               
Cow position:
               
chr18:43120006-43119596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
172-600
               

               
Cow position:
               
chr18:55008792-55009220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
79, 86
               

               
Conread position:
               
173-399
               

               
Cow position:
               
chr18:51765176-51764950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
181, 161
               

               
Conread position:
               
173-567
               

               
Cow position:
               
chr18:50246143-50246537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
177-570
               

               
Cow position:
               
chr18:40074925-40075318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
142, 163
               

               
Conread position:
               
178-570
               

               
Cow position:
               
chr18:43048741-43048349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
183-561
               

               
Cow position:
               
chr18:49033391-49033012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
14, 151
               

               
Conread position:
               
185-459
               

               
Cow position:
               
chr18:55067116-55066842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
185-559
               

               
Cow position:
               
chr18:51969335-51969707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
267, 0
               

               
Conread position:
               
185-566
               

               
Cow position:
               
chr18:53509232-53509613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
185-568
               

               
Cow position:
               
chr18:56128787-56129169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
339, 0
               

               
Conread position:
               
185-569
               

               
Cow position:
               
chr18:55523386-55523770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
138, 134
               

               
Conread position:
               
185-575
               

               
Cow position:
               
chr18:53525686-53526076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
185-579
               

               
Cow position:
               
chr18:51368776-51368382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
185-586
               

               
Cow position:
               
chr18:14453294-14452893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
390, 382
               

               
Conread position:
               
186-460
               

               
Cow position:
               
chr18:43053464-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
186-561
               

               
Cow position:
               
chr18:44253896-44253521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
134, 142
               

               
Conread position:
               
186-583
               

               
Cow position:
               
chr18:52427544-52427941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
186-583
               

               
Cow position:
               
chr18:52432893-52433290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
186-600
               

               
Cow position:
               
chr18:54979555-54979969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
325, 311
               

               
Conread position:
               
190-443
               

               
Cow position:
               
chr18:56248160-56247907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
190-569
               

               
Cow position:
               
chr18:41949349-41948970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 322
               

               
Conread position:
               
190-586
               

               
Cow position:
               
chr18:40325047-40324657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
192-580
               

               
Cow position:
               
chr18:44254054-44253670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
296, 152
               

               
Conread position:
               
193-585
               

               
Cow position:
               
chr18:40324882-40324490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
334, 346
               

               
Conread position:
               
194-568
               

               
Cow position:
               
chr18:49022733-49023107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 67
               

               
Conread position:
               
195-585
               

               
Cow position:
               
chr18:43120319-43119929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
122, 133
               

               
Conread position:
               
197-570
               

               
Cow position:
               
chr18:51839557-51839182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 142
               

               
Conread position:
               
203-567
               

               
Cow position:
               
chr18:41197503-41197867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
203-567
               

               
Cow position:
               
chr18:53636116-53635752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
203-579
               

               
Cow position:
               
chr18:55008489-55008863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
204, 67
               

               
Conread position:
               
203-599
               

               
Cow position:
               
chr18:33093094-33092698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
145, 130
               

               
Conread position:
               
206-569
               

               
Cow position:
               
chr18:51752319-51751957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
199, 9
               

               
Conread position:
               
206-580
               

               
Cow position:
               
chr18:43175593-43175219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
116, 122
               

               
Conread position:
               
206-586
               

               
Cow position:
               
chr18:51789878-51789498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
207-567
               

               
Cow position:
               
chr18:50295204-50295564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
289, 280
               

               
Conread position:
               
209-569
               

               
Cow position:
               
chr18:53586645-53586285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
215-461
               

               
Cow position:
               
chr18:50083306-50083552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
230-600
               

               
Cow position:
               
chr18:56316004-56316374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
175, 185
               

               
Conread position:
               
237-600
               

               
Cow position:
               
chr18:43023109-43022746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
103, 89
               

               
Conread position:
               
239-586
               

               
Cow position:
               
chr18:49022694-49023041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
243-558
               

               
Cow position:
               
chr18:14453321-14453005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
243-568
               

               
Cow position:
               
chr18:41949380-41949055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
247-600
               

               
Cow position:
               
chr18:42985588-42985235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
348, 323
               

               
Conread position:
               
248-567
               

               
Cow position:
               
chr18:52012468-52012151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
259-568
               

               
Cow position:
               
chr18:42960315-42960007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
263-541
               

               
Cow position:
               
chr18:43053471-43053193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 65
               

               
Conread position:
               
265-586
               

               
Cow position:
               
chr18:42744727-42744406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
269-569
               

               
Cow position:
               
chr18:55067116-55066816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
273-568
               

               
Cow position:
               
chr18:42827402-42827697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
284-567
               

               
Cow position:
               
chr18:41197500-41197783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 42
               

               
Conread position:
               
346-600
               

               
Cow position:
               
chr18:42837949-42837695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
237, 250
               

               
Conread position:
               
347-600
               

               
Cow position:
               
chr18:43048740-43048487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
241, 249
               
Show alignments to all cow chromosomes.