Cow genome map
Conread name: | Ss1.1-rmed25c_n3.5 |
Conread position: | 5-569 |
Cow position: | chr19:23614172-23614734 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 18 |
Conread position: | 6-579 |
Cow position: | chr19:14939973-14940544 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 445, 9 |
Conread position: | 8-327 |
Cow position: | chr19:23650127-23650446 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 208 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 60, 51 |
Conread position: | 8-333 |
Cow position: | chr19:23597350-23597675 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 220 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 162, 157 |
Conread position: | 8-555 |
Cow position: | chr19:23649791-23650338 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 55 |
Conread position: | 8-561 |
Cow position: | chr19:23614089-23614642 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 51 |
Conread position: | 8-561 |
Cow position: | chr19:23614341-23614894 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 37 |
Conread position: | 8-567 |
Cow position: | chr19:14960322-14959767 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 157 |
Conread position: | 8-579 |
Cow position: | chr19:23614509-23615080 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 37 |
Conread position: | 15-505 |
Cow position: | chr19:14940568-14941057 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 288 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 482, 0 |
Conread position: | 15-569 |
Cow position: | chr19:14940232-14940786 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-573 |
Cow position: | chr19:14960476-14959928 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 68 |
Conread position: | 24-566 |
Cow position: | chr19:23613433-23613975 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 66 |
Conread position: | 40-457 |
Cow position: | chr19:23649991-23650408 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 271 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 117, 127 |
Conread position: | 52-547 |
Cow position: | chr19:43570194-43569702 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 269, 7 |
Conread position: | 53-317 |
Cow position: | chr19:14948352-14948089 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 173 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 53-552 |
Cow position: | chr19:20635519-20635020 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 36 |
Conread position: | 53-561 |
Cow position: | chr19:23649668-23650176 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 53-569 |
Cow position: | chr19:14940186-14940702 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 53-580 |
Cow position: | chr19:23614470-23614997 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 177 |
Conread position: | 53-586 |
Cow position: | chr19:23649752-23650285 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 55-569 |
Cow position: | chr19:23596812-23597323 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 301 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 96, 105 |
Conread position: | 61-567 |
Cow position: | chr19:14940446-14940952 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 304 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 419, 412 |
Conread position: | 62-553 |
Cow position: | chr19:23614647-23615136 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 259, 266 |
Conread position: | 62-567 |
Cow position: | chr19:23596987-23597489 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 62-582 |
Cow position: | chr19:23614059-23614576 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 28 |
Conread position: | 62-586 |
Cow position: | chr19:23614311-23614835 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 182 |
Conread position: | 70-438 |
Cow position: | chr19:14940707-14941075 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 218 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 71-571 |
Cow position: | chr19:23613816-23614315 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 19 |
Conread position: | 73-564 |
Cow position: | chr19:14959603-14959121 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 296 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 179, 172 |
Conread position: | 73-576 |
Cow position: | chr19:20635587-20635080 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 322 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 12, 105 |
Conread position: | 82-567 |
Cow position: | chr19:23649946-23650434 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 169 |
Conread position: | 83-450 |
Cow position: | chr19:14959678-14959310 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 231 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 21, 44 |
Conread position: | 83-567 |
Cow position: | chr19:20677339-20677823 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 284 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 252, 238 |
Conread position: | 84-522 |
Cow position: | chr19:23597258-23597696 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 50 |
Conread position: | 84-569 |
Cow position: | chr19:43570247-43569762 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 76 |
Conread position: | 85-557 |
Cow position: | chr19:14948489-14948017 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 296 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 20, 85 |
Conread position: | 89-567 |
Cow position: | chr19:14940558-14941036 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 295 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 412, 399 |
Conread position: | 89-585 |
Cow position: | chr19:14959503-14959022 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 303 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 85, 73 |
Conread position: | 89-585 |
Cow position: | chr19:23613750-23614246 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 89-605 |
Cow position: | chr19:23613666-23614184 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 501, 0 |
Conread position: | 91-567 |
Cow position: | chr19:23649285-23649762 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 292 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 12, 70 |
Conread position: | 91-585 |
Cow position: | chr19:20677766-20678261 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 95 |
Conread position: | 91-588 |
Cow position: | chr19:20677682-20678180 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 307 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 92-535 |
Cow position: | chr19:14959257-14958820 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 270 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 138, 0 |
Conread position: | 93-599 |
Cow position: | chr19:23613334-23613840 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 94-582 |
Cow position: | chr19:20677854-20678339 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 92 |
Conread position: | 96-568 |
Cow position: | chr19:20678025-20678496 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 7 |
Conread position: | 98-586 |
Cow position: | chr19:20677941-20678430 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 313 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 5, 100 |
Conread position: | 102-451 |
Cow position: | chr19:20678366-20678715 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 227 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 240, 229 |
Conread position: | 102-460 |
Cow position: | chr19:23597360-23597718 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 228 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 220, 226 |
Conread position: | 102-567 |
Cow position: | chr19:20677442-20677907 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 276 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 217, 222 |
Conread position: | 102-567 |
Cow position: | chr19:23597108-23597573 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 291 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 49, 63 |
Conread position: | 102-567 |
Cow position: | chr19:23649465-23649930 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 102-567 |
Cow position: | chr19:23649549-23650014 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 297 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 57, 84 |
Conread position: | 102-585 |
Cow position: | chr19:23597192-23597675 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 102-586 |
Cow position: | chr19:23614015-23614499 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 63 |
Conread position: | 103-566 |
Cow position: | chr19:20677527-20677990 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 289 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 26, 32 |
Conread position: | 104-569 |
Cow position: | chr19:20635636-20635171 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 334, 325 |
Conread position: | 112-570 |
Cow position: | chr19:23613605-23614063 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 291 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 207, 216 |
Conread position: | 113-404 |
Cow position: | chr19:23650148-23650439 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 184 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 118-568 |
Cow position: | chr19:20678214-20678664 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 119-580 |
Cow position: | chr19:20678299-20678757 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 291 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 67, 58 |
Conread position: | 120-568 |
Cow position: | chr19:14940421-14940869 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 210 |
Conread position: | 120-580 |
Cow position: | chr19:43570452-43570003 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 294 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 122-567 |
Cow position: | chr19:14959310-14958872 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 274 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 256, 14 |
Conread position: | 133-569 |
Cow position: | chr19:20677308-20677741 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 258 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 134-567 |
Cow position: | chr19:20677642-20678075 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 280 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 205, 187 |
Conread position: | 134-580 |
Cow position: | chr19:14940015-14940461 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 115 |
Conread position: | 158-561 |
Cow position: | chr19:23649437-23649841 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 253 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 352, 340 |
Conread position: | 164-570 |
Cow position: | chr19:14916020-14916421 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 249 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 117, 109 |
Conread position: | 171-586 |
Cow position: | chr19:14960411-14959998 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 326, 263 |
Conread position: | 173-579 |
Cow position: | chr19:14948484-14948079 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 249 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 185-567 |
Cow position: | chr19:20635639-20635257 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 234 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 304, 310 |
Conread position: | 191-600 |
Cow position: | chr19:14960475-14960068 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 259 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 36, 53 |
Conread position: | 205-580 |
Cow position: | chr19:14940002-14940377 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 123 |
Conread position: | 205-586 |
Cow position: | chr19:43570451-43570081 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 237 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 36, 44 |
Conread position: | 262-586 |
Cow position: | chr19:20635646-20635322 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 215 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 61, 66 |
Conread position: | 275-600 |
Cow position: | chr19:14939988-14940313 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 215 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 219, 237 |
Show alignments to all cow chromosomes.