Cow genome map
Conread name: | Ss1.1-rmed25c_n3.5 |
Conread position: | 6-367 |
Cow position: | chr23:25660383-25660745 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 227 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 14, 226 |
Conread position: | 8-567 |
Cow position: | chr23:25626265-25626821 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 340 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 19, 34 |
Conread position: | 15-320 |
Cow position: | chr23:24522494-24522189 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 190 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 64, 75 |
Conread position: | 16-567 |
Cow position: | chr23:24560899-24560348 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 38-447 |
Cow position: | chr23:24654046-24654455 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 263 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 65, 54 |
Conread position: | 38-450 |
Cow position: | chr23:25626628-25627040 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 263 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 113, 118 |
Conread position: | 38-567 |
Cow position: | chr23:24639229-24639758 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 360, 372 |
Conread position: | 53-316 |
Cow position: | chr23:24546966-24546703 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 178 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 97, 107 |
Conread position: | 53-369 |
Cow position: | chr23:24560441-24560126 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 208 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 98, 6 |
Conread position: | 53-418 |
Cow position: | chr23:24522539-24522175 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 237 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 98, 6 |
Conread position: | 53-445 |
Cow position: | chr23:24639749-24640139 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 237 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 297, 6 |
Conread position: | 53-465 |
Cow position: | chr23:24626336-24626746 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 6 |
Conread position: | 53-476 |
Cow position: | chr23:25724099-25723676 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 267 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 76, 82 |
Conread position: | 53-573 |
Cow position: | chr23:25660180-25660698 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 332 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 76, 6 |
Conread position: | 53-586 |
Cow position: | chr23:24639328-24639861 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 333 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 28, 37 |
Conread position: | 53-586 |
Cow position: | chr23:25698627-25698095 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 318 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 279, 18 |
Conread position: | 61-438 |
Cow position: | chr23:24535841-24535464 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 242 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 90, 95 |
Conread position: | 61-569 |
Cow position: | chr23:24522781-24522276 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 315 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 60, 52 |
Conread position: | 62-450 |
Cow position: | chr23:24560517-24560129 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 62-522 |
Cow position: | chr23:24560601-24560141 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 75-587 |
Cow position: | chr23:24639434-24639946 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 85 |
Conread position: | 76-569 |
Cow position: | chr23:25626162-25626655 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 309 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 19, 416 |
Conread position: | 80-482 |
Cow position: | chr23:25626587-25626988 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 260 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 84-522 |
Cow position: | chr23:24547103-24546665 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 86-450 |
Cow position: | chr23:24547017-24546653 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 238 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 86-567 |
Cow position: | chr23:24522672-24522194 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 305 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 49, 44 |
Conread position: | 89-547 |
Cow position: | chr23:24639616-24640074 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 279 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 133, 142 |
Conread position: | 89-568 |
Cow position: | chr23:24639532-24640010 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 76 |
Conread position: | 89-586 |
Cow position: | chr23:24547266-24546769 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 65 |
Conread position: | 89-586 |
Cow position: | chr23:24560658-24560161 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 259, 247 |
Conread position: | 91-522 |
Cow position: | chr23:25724151-25723714 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 277 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 93-561 |
Cow position: | chr23:24547178-24546710 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 309, 318 |
Conread position: | 98-567 |
Cow position: | chr23:24536056-24535587 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 411, 404 |
Conread position: | 100-463 |
Cow position: | chr23:24654022-24654387 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 242 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 100-586 |
Cow position: | chr23:25626526-25627008 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 102-443 |
Cow position: | chr23:25660396-25660737 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 205 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 102-559 |
Cow position: | chr23:24535968-24535511 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 103-558 |
Cow position: | chr23:24522823-24522371 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 270 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 245, 215 |
Conread position: | 103-569 |
Cow position: | chr23:25660145-25660611 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 239, 225 |
Conread position: | 104-455 |
Cow position: | chr23:24639715-24640066 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 231 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 214, 220 |
Conread position: | 104-487 |
Cow position: | chr23:24522572-24522190 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 249 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 244, 5 |
Conread position: | 105-567 |
Cow position: | chr23:24547334-24546872 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 55 |
Conread position: | 109-586 |
Cow position: | chr23:24560890-24560413 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 161 |
Conread position: | 113-402 |
Cow position: | chr23:25698653-25698363 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 185 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 113-568 |
Cow position: | chr23:24560718-24560264 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 47 |
Conread position: | 120-553 |
Cow position: | chr23:24626319-24626750 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 360, 343 |
Conread position: | 163-586 |
Cow position: | chr23:25626000-25626423 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 265 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 325, 354 |
Conread position: | 176-568 |
Cow position: | chr23:24639201-24639590 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 244 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 62, 29 |
Conread position: | 190-600 |
Cow position: | chr23:24626305-24626715 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 264 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 385, 370 |
Conread position: | 195-561 |
Cow position: | chr23:24654034-24654401 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 247 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 5, 148 |
Conread position: | 205-586 |
Cow position: | chr23:24547318-24546937 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 371, 362 |
Conread position: | 207-438 |
Cow position: | chr23:24521964-24521732 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 152 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 112, 121 |
Conread position: | 215-587 |
Cow position: | chr23:25724105-25723733 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 229 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 236-587 |
Cow position: | chr23:25698697-25698347 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 229 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 118, 101 |
Conread position: | 244-569 |
Cow position: | chr23:25625997-25626322 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 210 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 79, 84 |
Conread position: | 277-569 |
Cow position: | chr23:24547330-24547038 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 186 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 278-586 |
Cow position: | chr23:24522814-24522511 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 195 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 244, 24 |
Conread position: | 286-586 |
Cow position: | chr23:24654042-24654342 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 199 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 290, 274 |
Conread position: | 377-569 |
Cow position: | chr23:24536029-24535837 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 129 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.