Cow genome map
| Conread name: | Ss1.1-rmed25c_n3.5 |
| Conread position: | 10-600 |
| Cow position: | chr24:17035975-17035384 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 50 |
| Conread position: | 27-567 |
| Cow position: | chr24:17036377-17035837 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 187 |
| Conread position: | 31-580 |
| Cow position: | chr24:17036121-17035572 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 129 |
| Conread position: | 53-388 |
| Cow position: | chr24:17013192-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 121, 8 |
| Conread position: | 53-443 |
| Cow position: | chr24:17077897-17077508 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 53-569 |
| Cow position: | chr24:17035678-17035163 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 54-454 |
| Cow position: | chr24:17035427-17035026 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 11, 107 |
| Conread position: | 56-555 |
| Cow position: | chr24:17036012-17035513 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-600 |
| Cow position: | chr24:17036432-17035888 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 242 |
| Conread position: | 59-570 |
| Cow position: | chr24:17070408-17070919 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 61-600 |
| Cow position: | chr24:17078058-17077519 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 275 |
| Conread position: | 62-586 |
| Cow position: | chr24:17077973-17077451 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 272 |
| Conread position: | 68-580 |
| Cow position: | chr24:17070501-17071013 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 67 |
| Conread position: | 68-600 |
| Cow position: | chr24:17036168-17035636 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 163 |
| Conread position: | 70-567 |
| Cow position: | chr24:17078217-17077720 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-567 |
| Cow position: | chr24:17035575-17035081 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 87 |
| Conread position: | 73-573 |
| Cow position: | chr24:17035827-17035328 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 84-600 |
| Cow position: | chr24:17035732-17035216 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 81 |
| Conread position: | 84-600 |
| Cow position: | chr24:17078119-17077603 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 250 |
| Conread position: | 89-573 |
| Cow position: | chr24:17036483-17036000 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 295 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 474, 0 |
| Conread position: | 95-357 |
| Cow position: | chr24:17070780-17071042 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 66, 70 |
| Conread position: | 98-586 |
| Cow position: | chr24:17036559-17036070 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 307 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 15, 134 |
| Conread position: | 104-569 |
| Cow position: | chr24:17078351-17077886 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 258 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 112-450 |
| Cow position: | chr24:17013166-17013504 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 39, 48 |
| Conread position: | 113-529 |
| Cow position: | chr24:17070630-17071046 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 397, 389 |
| Conread position: | 115-579 |
| Cow position: | chr24:17036622-17036161 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 460, 63 |
| Conread position: | 134-334 |
| Cow position: | chr24:16986454-16986654 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 192-518 |
| Cow position: | chr24:17013162-17013488 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 195-586 |
| Cow position: | chr24:17070376-17070767 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 31, 57 |
| Conread position: | 261-586 |
| Cow position: | chr24:17013147-17013472 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 250, 243 |
Show alignments to all cow chromosomes.