Cow genome map

Conread name: Ss1.1-rmed25c_n3.5

Conread position: 8-600
Cow position:
Alignm length: 598
Alignm identity: 336
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 71, 79

Conread position: 27-417
Cow position:
Alignm length: 392
Alignm identity: 235
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 333, 0

Conread position: 33-556
Cow position:
Alignm length: 527
Alignm identity: 288
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 123, 106

Conread position: 40-439
Cow position:
Alignm length: 406
Alignm identity: 260
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 39, 45

Conread position: 53-561
Cow position:
Alignm length: 514
Alignm identity: 327
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 76, 6

Conread position: 53-567
Cow position:
Alignm length: 516
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 419, 6

Conread position: 53-567
Cow position:
Alignm length: 516
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 37

Conread position: 53-568
Cow position:
Alignm length: 517
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 121

Conread position: 62-600
Cow position:
Alignm length: 540
Alignm identity: 304
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 533, 209

Conread position: 68-477
Cow position:
Alignm length: 412
Alignm identity: 259
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 13, 22

Conread position: 68-522
Cow position:
Alignm length: 456
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 69-569
Cow position:
Alignm length: 502
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 180

Conread position: 70-273
Cow position:
Alignm length: 204
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 70-568
Cow position:
Alignm length: 500
Alignm identity: 310
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 336, 158

Conread position: 71-382
Cow position:
Alignm length: 312
Alignm identity: 196
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 80-465
Cow position:
Alignm length: 387
Alignm identity: 239
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 242, 9

Conread position: 89-523
Cow position:
Alignm length: 441
Alignm identity: 279
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 126, 117

Conread position: 89-561
Cow position:
Alignm length: 474
Alignm identity: 295
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 61, 70

Conread position: 91-585
Cow position:
Alignm length: 499
Alignm identity: 305
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 12, 70

Conread position: 94-561
Cow position:
Alignm length: 469
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 12

Conread position: 96-404
Cow position:
Alignm length: 310
Alignm identity: 202
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 55, 7

Conread position: 97-557
Cow position:
Alignm length: 462
Alignm identity: 276
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 130, 148

Conread position: 98-357
Cow position:
Alignm length: 261
Alignm identity: 167
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 99-568
Cow position:
Alignm length: 473
Alignm identity: 302
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 284

Conread position: 102-567
Cow position:
Alignm length: 469
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 363

Conread position: 102-586
Cow position:
Alignm length: 492
Alignm identity: 308
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 55, 65

Conread position: 105-554
Cow position:
Alignm length: 450
Alignm identity: 251
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 109-561
Cow position:
Alignm length: 459
Alignm identity: 296
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 56, 13

Conread position: 130-586
Cow position:
Alignm length: 457
Alignm identity: 281
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 7, 0

Conread position: 134-549
Cow position:
Alignm length: 417
Alignm identity: 259
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 22, 16

Conread position: 158-533
Cow position:
Alignm length: 376
Alignm identity: 241
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 29, 0

Conread position: 173-578
Cow position:
Alignm length: 411
Alignm identity: 258
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 247, 30

Conread position: 177-600
Cow position:
Alignm length: 426
Alignm identity: 270
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 399, 386

Conread position: 190-561
Cow position:
Alignm length: 375
Alignm identity: 225
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 5, 42

Conread position: 193-568
Cow position:
Alignm length: 376
Alignm identity: 204
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 238-568
Cow position:
Alignm length: 332
Alignm identity: 205
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 16

Conread position: 347-568
Cow position:
Alignm length: 224
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 150, 133

Show alignments to all cow chromosomes.