Cow genome map
| Conread name: | Ss1.1-rmed25c_n3.5 |
| Conread position: | 53-334 |
| Cow position: | chr6:49341187-49341466 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 28, 37 |
| Conread position: | 53-561 |
| Cow position: | chr6:49396236-49396744 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 303 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 169, 178 |
| Conread position: | 53-567 |
| Cow position: | chr6:49340431-49340945 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 289 |
| Conread position: | 53-579 |
| Cow position: | chr6:49340851-49341377 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 53-600 |
| Cow position: | chr6:49340683-49341230 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 53-600 |
| Cow position: | chr6:49396320-49396867 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 318 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 301, 285 |
| Conread position: | 60-569 |
| Cow position: | chr6:49396081-49396584 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 307 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 62-505 |
| Cow position: | chr6:49341028-49341469 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 98 |
| Conread position: | 69-569 |
| Cow position: | chr6:49340125-49340611 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 310 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 199, 10 |
| Conread position: | 76-567 |
| Cow position: | chr6:49340791-49341281 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 8 |
| Conread position: | 89-567 |
| Cow position: | chr6:49340635-49341113 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 76 |
| Conread position: | 89-579 |
| Cow position: | chr6:49340551-49341041 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 71 |
| Conread position: | 109-569 |
| Cow position: | chr6:49340403-49340863 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 223 |
| Conread position: | 157-569 |
| Cow position: | chr6:49340367-49340779 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 342 |
| Conread position: | 158-587 |
| Cow position: | chr6:49396095-49396518 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 73 |
Show alignments to all cow chromosomes.