Cow genome map
Conread name: | Ss1.1-rmed25c_n3.5 |
Conread position: | 7-600 |
Cow position: | chr7:1014170-1014757 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 496 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 486, 0 |
Conread position: | 8-568 |
Cow position: | chr7:42879042-42878483 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 231, 241 |
Conread position: | 8-569 |
Cow position: | chr7:8277914-8278473 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 350 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 80, 51 |
Conread position: | 8-586 |
Cow position: | chr7:1014753-1015331 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 19-443 |
Cow position: | chr7:18390409-18390831 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 262 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 84, 21 |
Conread position: | 25-586 |
Cow position: | chr7:1014274-1014827 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 550, 12 |
Conread position: | 27-528 |
Cow position: | chr7:42878769-42878270 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 314 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 49, 33 |
Conread position: | 31-460 |
Cow position: | chr7:1015028-1015457 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 38-463 |
Cow position: | chr7:3180549-3180966 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 278 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 27, 7 |
Conread position: | 38-561 |
Cow position: | chr7:3179709-3180232 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 508, 498 |
Conread position: | 38-572 |
Cow position: | chr7:3179961-3180494 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 522, 0 |
Conread position: | 39-315 |
Cow position: | chr7:1439987-1440263 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 179 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 14, 21 |
Conread position: | 40-567 |
Cow position: | chr7:8242813-8243340 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 328 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 63, 33 |
Conread position: | 41-557 |
Cow position: | chr7:42879263-42878745 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 135 |
Conread position: | 50-567 |
Cow position: | chr7:42879336-42878819 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 59 |
Conread position: | 51-580 |
Cow position: | chr7:3179636-3180167 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 53-567 |
Cow position: | chr7:42879081-42878567 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 272, 289 |
Conread position: | 53-587 |
Cow position: | chr7:1014714-1015248 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 176 |
Conread position: | 61-464 |
Cow position: | chr7:1438284-1438687 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 262 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 21, 29 |
Conread position: | 61-516 |
Cow position: | chr7:18390365-18390820 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 282 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 20, 29 |
Conread position: | 61-568 |
Cow position: | chr7:42878905-42878398 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 264, 281 |
Conread position: | 61-585 |
Cow position: | chr7:3180068-3180592 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 98 |
Conread position: | 61-586 |
Cow position: | chr7:11601152-11600627 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 29 |
Conread position: | 68-421 |
Cow position: | chr7:1439933-1440285 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 223 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 13, 22 |
Conread position: | 69-568 |
Cow position: | chr7:42878813-42878315 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 309 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 257, 273 |
Conread position: | 75-488 |
Cow position: | chr7:8243520-8243932 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 264 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 75, 8 |
Conread position: | 79-567 |
Cow position: | chr7:8277733-8278221 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 298 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 157, 178 |
Conread position: | 81-584 |
Cow position: | chr7:8325291-8325798 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 319 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 22, 159 |
Conread position: | 84-502 |
Cow position: | chr7:1014997-1015415 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 84-600 |
Cow position: | chr7:3180259-3180775 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 235, 244 |
Conread position: | 85-452 |
Cow position: | chr7:3180512-3180880 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 316, 284 |
Conread position: | 86-495 |
Cow position: | chr7:8243698-8244104 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 257 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 173, 154 |
Conread position: | 86-567 |
Cow position: | chr7:8242943-8243423 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 306 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 235, 239 |
Conread position: | 86-567 |
Cow position: | chr7:8243446-8243927 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 301 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 71, 80 |
Conread position: | 89-567 |
Cow position: | chr7:8277659-8278137 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 303 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 232, 237 |
Conread position: | 89-567 |
Cow position: | chr7:18390141-18390619 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 89-568 |
Cow position: | chr7:1439787-1440264 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 296 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 248, 75 |
Conread position: | 89-568 |
Cow position: | chr7:3179928-3180406 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 239, 232 |
Conread position: | 89-586 |
Cow position: | chr7:1014918-1015415 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 74 |
Conread position: | 89-586 |
Cow position: | chr7:1439704-1440198 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 305 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 40, 46 |
Conread position: | 89-586 |
Cow position: | chr7:3180180-3180677 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 71 |
Conread position: | 89-586 |
Cow position: | chr7:3180348-3180844 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 480, 441 |
Conread position: | 89-586 |
Cow position: | chr7:18390225-18390722 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 46 |
Conread position: | 91-568 |
Cow position: | chr7:8325217-8325695 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 297 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 12, 150 |
Conread position: | 93-357 |
Cow position: | chr7:11434504-11434240 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 173 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 58, 67 |
Conread position: | 93-465 |
Cow position: | chr7:8277411-8277783 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 235 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 219, 233 |
Conread position: | 93-565 |
Cow position: | chr7:8277579-8278051 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 300 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 66, 46 |
Conread position: | 93-569 |
Cow position: | chr7:8243286-8243761 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 295 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 140, 95 |
Conread position: | 94-342 |
Cow position: | chr7:8325892-8326141 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 163 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 9, 147 |
Conread position: | 94-567 |
Cow position: | chr7:11434749-11434282 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 280 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 9, 71 |
Conread position: | 94-570 |
Cow position: | chr7:8325640-8326117 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 300 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 9, 164 |
Conread position: | 95-567 |
Cow position: | chr7:8277329-8277801 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 286 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 34, 40 |
Conread position: | 102-402 |
Cow position: | chr7:8243211-8243510 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 200 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 161, 138 |
Conread position: | 102-567 |
Cow position: | chr7:11434824-11434366 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 277 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 157, 145 |
Conread position: | 102-584 |
Cow position: | chr7:8324893-8325378 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 306 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 57, 47 |
Conread position: | 102-586 |
Cow position: | chr7:11600943-11600459 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 291 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 73, 59 |
Conread position: | 102-604 |
Cow position: | chr7:8325481-8325985 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 317 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 212, 223 |
Conread position: | 104-356 |
Cow position: | chr7:11600689-11600437 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 168 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 104-439 |
Cow position: | chr7:11600773-11600438 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 217 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 217, 224 |
Conread position: | 104-561 |
Cow position: | chr7:8325063-8325520 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 230 |
Conread position: | 104-586 |
Cow position: | chr7:3179859-3180341 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 109-549 |
Cow position: | chr7:11434971-11434545 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 276 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 42, 52 |
Conread position: | 109-584 |
Cow position: | chr7:8277259-8277737 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 293 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 66, 47 |
Conread position: | 109-585 |
Cow position: | chr7:11601188-11600712 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 111-574 |
Cow position: | chr7:8324734-8325197 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 45 |
Conread position: | 112-570 |
Cow position: | chr7:11601017-11600559 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 283 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 118-586 |
Cow position: | chr7:11601262-11600795 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 298 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 52, 31 |
Conread position: | 119-561 |
Cow position: | chr7:8277857-8278299 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 291 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 10, 16 |
Conread position: | 119-568 |
Cow position: | chr7:8243144-8243592 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 280 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 300, 237 |
Conread position: | 119-568 |
Cow position: | chr7:8277521-8277969 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 277 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 444, 0 |
Conread position: | 120-528 |
Cow position: | chr7:11600841-11600433 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 251 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 126-567 |
Cow position: | chr7:18390010-18390451 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 271 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 22, 13 |
Conread position: | 133-586 |
Cow position: | chr7:1014710-1015163 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 134-567 |
Cow position: | chr7:42879420-42878987 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 268 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 25, 36 |
Conread position: | 134-568 |
Cow position: | chr7:18390354-18390787 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 429, 0 |
Conread position: | 134-570 |
Cow position: | chr7:8242823-8243259 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 265 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 29, 22 |
Conread position: | 140-402 |
Cow position: | chr7:11434541-11434279 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 173 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 202, 189 |
Conread position: | 148-586 |
Cow position: | chr7:3179652-3180089 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 9 |
Conread position: | 164-585 |
Cow position: | chr7:1014657-1015078 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 264 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 172-567 |
Cow position: | chr7:1439448-1439845 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 254 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 53, 48 |
Conread position: | 172-585 |
Cow position: | chr7:18390140-18390553 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 267 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 331, 340 |
Conread position: | 179-586 |
Cow position: | chr7:1014090-1014497 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 243 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 190-588 |
Cow position: | chr7:8324729-8325127 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 251 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 68, 51 |
Conread position: | 192-556 |
Cow position: | chr7:11601272-11600909 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 240 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 62, 45 |
Conread position: | 207-600 |
Cow position: | chr7:18390007-18390400 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 247 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 35, 41 |
Conread position: | 347-604 |
Cow position: | chr7:11601202-11600943 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 167 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 16, 10 |
Show alignments to all cow chromosomes.