Cow genome map
| Conread name: | Ss1.1-rmed25c_n3.5 |
| Conread position: | 8-548 |
| Cow position: | chrX:29045194-29044654 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-567 |
| Cow position: | chrX:25325269-25324710 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 332 |
| Conread position: | 15-412 |
| Cow position: | chrX:25324590-25324197 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 354, 0 |
| Conread position: | 26-585 |
| Cow position: | chrX:25326007-25325448 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 335 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 298, 302 |
| Conread position: | 39-573 |
| Cow position: | chrX:25309903-25310438 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 49-585 |
| Cow position: | chrX:29045321-29044785 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 53-397 |
| Cow position: | chrX:29045716-29045372 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 289, 266 |
| Conread position: | 53-461 |
| Cow position: | chrX:25324635-25324230 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 120, 7 |
| Conread position: | 53-561 |
| Cow position: | chrX:25325140-25324632 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 275 |
| Conread position: | 53-567 |
| Cow position: | chrX:29045233-29044719 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 121 |
| Conread position: | 53-568 |
| Cow position: | chrX:25324888-25324374 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 37, 30 |
| Conread position: | 53-572 |
| Cow position: | chrX:25325476-25324958 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 99 |
| Conread position: | 56-567 |
| Cow position: | chrX:25325725-25325214 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 456, 447 |
| Conread position: | 61-531 |
| Cow position: | chrX:25324712-25324240 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 258, 267 |
| Conread position: | 68-567 |
| Cow position: | chrX:25325377-25324878 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 421, 438 |
| Conread position: | 68-586 |
| Cow position: | chrX:25324789-25324271 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 69-464 |
| Cow position: | chrX:29045049-29044654 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 69-567 |
| Cow position: | chrX:25310017-25310515 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 176 |
| Conread position: | 70-561 |
| Cow position: | chrX:25309766-25310257 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-599 |
| Cow position: | chrX:25324951-25324426 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 88 |
| Conread position: | 74-599 |
| Cow position: | chrX:25325539-25325014 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 521, 512 |
| Conread position: | 83-534 |
| Cow position: | chrX:25310112-25310566 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 295 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 16, 167 |
| Conread position: | 85-367 |
| Cow position: | chrX:25310285-25310567 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 148, 162 |
| Conread position: | 88-586 |
| Cow position: | chrX:25309868-25310366 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 307 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 400, 407 |
| Conread position: | 89-569 |
| Cow position: | chrX:25325272-25324792 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 89-600 |
| Cow position: | chrX:25325776-25325265 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 319 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 148, 130 |
| Conread position: | 98-489 |
| Cow position: | chrX:12627509-12627900 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 5, 159 |
| Conread position: | 102-561 |
| Cow position: | chrX:25325595-25325136 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 400, 385 |
| Conread position: | 112-434 |
| Cow position: | chrX:29045741-29045419 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-586 |
| Cow position: | chrX:25309666-25310114 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 286 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 152-584 |
| Cow position: | chrX:29045868-29045440 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 256-570 |
| Cow position: | chrX:12627333-12627646 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 300-568 |
| Cow position: | chrX:25309660-25309927 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 260, 0 |
Show alignments to all cow chromosomes.