Cow genome map


           Conread name:
           Ss1.1-rmed25c_n3.5
        

               Conread position:
               8-548
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-567
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               314, 332
               

               Conread position:
               15-412
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               354, 0
               

               Conread position:
               26-585
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               335
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               298, 302
               

               Conread position:
               39-573
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               49-585
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               53-397
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               289, 266
               

               Conread position:
               53-461
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               120, 7
               

               Conread position:
               53-561
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 275
               

               Conread position:
               53-567
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 121
               

               Conread position:
               53-568
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               321
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               37, 30
               

               Conread position:
               53-572
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 99
               

               Conread position:
               56-567
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               456, 447
               

               Conread position:
               61-531
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               258, 267
               

               Conread position:
               68-567
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               421, 438
               

               Conread position:
               68-586
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 22
               

               Conread position:
               69-464
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               69-567
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 176
               

               Conread position:
               70-561
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               74-599
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 88
               

               Conread position:
               74-599
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               521, 512
               

               Conread position:
               83-534
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               295
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               16, 167
               

               Conread position:
               85-367
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               148, 162
               

               Conread position:
               88-586
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               307
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               400, 407
               

               Conread position:
               89-569
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               89-600
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               319
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               148, 130
               

               Conread position:
               98-489
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               5, 159
               

               Conread position:
               102-561
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               400, 385
               

               Conread position:
               112-434
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               138-586
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               286
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               21, 67
               

               Conread position:
               152-584
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               256-570
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               57, 70
               

               Conread position:
               300-568
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               260, 0
               
Show alignments to all cow chromosomes.