Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rmgp001_g10.5
        

               Conread position:
               1-108
               

               Cow position:
               chr1:26934766-26934655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-116
               

               Cow position:
               chr1:8659423-8659541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               54, 62
               

               Conread position:
               1-116
               

               Cow position:
               chr1:9437774-9437659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-120
               

               Cow position:
               chr1:71715949-71716072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-125
               

               Cow position:
               chr1:89835008-89835129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 85
               

               Conread position:
               1-127
               

               Cow position:
               chr1:81579538-81579667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-128
               

               Cow position:
               chr1:85865560-85865685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-129
               

               Cow position:
               chr1:99105109-99104981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-132
               

               Cow position:
               chr1:53650664-53650800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-133
               

               Cow position:
               chr1:99118160-99118296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr1:32954989-32954858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr1:54484842-54484977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               53, 106
               

               Conread position:
               1-143
               

               Cow position:
               chr1:98577252-98577394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               chr1:84786545-84786695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               53, 121
               

               Conread position:
               1-146
               

               Cow position:
               chr1:95071760-95071904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 53
               

               Conread position:
               1-147
               

               Cow position:
               chr1:62996269-62996415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-151
               

               Cow position:
               chr1:19545325-19545174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-152
               

               Cow position:
               chr1:22628863-22628712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               49, 70
               

               Conread position:
               1-152
               

               Cow position:
               chr1:30504245-30504397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 94
               

               Conread position:
               1-152
               

               Cow position:
               chr1:33716996-33717154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr1:40062223-40062378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 146
               

               Conread position:
               1-152
               

               Cow position:
               chr1:43893700-43893851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               31, 118
               

               Conread position:
               1-152
               

               Cow position:
               chr1:55686444-55686291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               1-152
               

               Cow position:
               chr1:58341383-58341536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               46, 119
               

               Conread position:
               1-153
               

               Cow position:
               chr1:25281901-25281750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-187
               

               Cow position:
               chr1:56711847-56711654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               52, 84
               

               Conread position:
               1-187
               

               Cow position:
               chr1:89395367-89395566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-191
               

               Cow position:
               chr1:4027636-4027836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 171
               

               Conread position:
               1-193
               

               Cow position:
               chr1:36874790-36874984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               153, 34
               

               Conread position:
               1-193
               

               Cow position:
               chr1:52506769-52506584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               124, 12
               

               Conread position:
               1-193
               

               Cow position:
               chr1:57698679-57698477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-194
               

               Cow position:
               chr1:85783300-85783496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               1-195
               

               Cow position:
               chr1:67008963-67008771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               153, 33
               

               Conread position:
               1-196
               

               Cow position:
               chr1:92370586-92370385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               53, 29
               

               Conread position:
               1-197
               

               Cow position:
               chr1:54163035-54162832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               46, 83
               

               Conread position:
               1-197
               

               Cow position:
               chr1:81180205-81179997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-197
               

               Cow position:
               chr1:85361630-85361835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-197
               

               Cow position:
               chr1:95215411-95215206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-199
               

               Cow position:
               chr1:51836346-51836547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               115, 57
               

               Conread position:
               1-199
               

               Cow position:
               chr1:94212008-94212207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               114, 175
               

               Conread position:
               1-200
               

               Cow position:
               chr1:1877802-1878008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               53, 88
               

               Conread position:
               1-200
               

               Cow position:
               chr1:50634631-50634423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-201
               

               Cow position:
               chr1:14561173-14560965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-201
               

               Cow position:
               chr1:46940087-46939878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               52, 68
               

               Conread position:
               1-202
               

               Cow position:
               chr1:23634126-23633930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               115, 57
               

               Conread position:
               1-202
               

               Cow position:
               chr1:32631241-32631442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               114, 66
               

               Conread position:
               1-202
               

               Cow position:
               chr1:53495238-53495446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 188
               

               Conread position:
               1-202
               

               Cow position:
               chr1:55357511-55357305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-202
               

               Cow position:
               chr1:67014158-67014361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               46, 85
               

               Conread position:
               1-202
               

               Cow position:
               chr1:71797125-71796934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr1:34000680-34000896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr1:56748364-56748576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr1:63905699-63905489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               48, 95
               

               Conread position:
               1-203
               

               Cow position:
               chr1:79663891-79663688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 119
               

               Conread position:
               1-204
               

               Cow position:
               chr1:6321986-6322185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               1-204
               

               Cow position:
               chr1:9444075-9443867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-205
               

               Cow position:
               chr1:49839282-49839490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-206
               

               Cow position:
               chr1:70282710-70282920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               62, 53
               

               Conread position:
               1-207
               

               Cow position:
               chr1:67821435-67821227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 54
               

               Conread position:
               1-207
               

               Cow position:
               chr1:69941190-69940983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               124, 84
               

               Conread position:
               1-208
               

               Cow position:
               chr1:20287889-20288108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               53, 148
               

               Conread position:
               1-208
               

               Cow position:
               chr1:49131347-49131131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 210
               

               Conread position:
               1-208
               

               Cow position:
               chr1:61149758-61149563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr1:87216237-87216445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 71
               

               Conread position:
               1-209
               

               Cow position:
               chr1:3035218-3035004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               63, 57
               

               Conread position:
               1-212
               

               Cow position:
               chr1:26159657-26159440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-217
               

               Cow position:
               chr1:82861549-82861775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               52, 196
               

               Conread position:
               1-217
               

               Cow position:
               chr1:100537585-100537805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               48, 127
               

               Conread position:
               1-219
               

               Cow position:
               chr1:51628727-51628504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               52, 153
               

               Conread position:
               1-225
               

               Cow position:
               chr1:3456647-3456870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               152, 53
               

               Conread position:
               1-226
               

               Cow position:
               chr1:96713039-96712805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-230
               

               Cow position:
               chr1:3661281-3661058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               60, 137
               

               Conread position:
               1-230
               

               Cow position:
               chr1:41004592-41004354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               53, 17
               

               Conread position:
               1-237
               

               Cow position:
               chr1:95050325-95050074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               115, 188
               

               Conread position:
               1-237
               

               Cow position:
               chr1:99095138-99095377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               54, 76
               

               Conread position:
               1-238
               

               Cow position:
               chr1:95056830-95057068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               134, 179
               

               Conread position:
               1-239
               

               Cow position:
               chr1:57900966-57900726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               58, 198
               

               Conread position:
               1-240
               

               Cow position:
               chr1:12596126-12595885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               152, 31
               

               Conread position:
               1-241
               

               Cow position:
               chr1:3962909-3962681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               139, 55
               

               Conread position:
               1-242
               

               Cow position:
               chr1:3340712-3340956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               53, 138
               

               Conread position:
               1-242
               

               Cow position:
               chr1:31235157-31234913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               55, 199
               

               Conread position:
               1-242
               

               Cow position:
               chr1:46885868-46886110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               14, 118
               

               Conread position:
               1-243
               

               Cow position:
               chr1:3752167-3751919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               115, 201
               

               Conread position:
               1-243
               

               Cow position:
               chr1:50679511-50679260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               1-243
               

               Cow position:
               chr1:71946596-71946351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               153, 57
               

               Conread position:
               1-243
               

               Cow position:
               chr1:98790412-98790654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               53, 36
               

               Conread position:
               1-244
               

               Cow position:
               chr1:666135-666386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               86, 57
               

               Conread position:
               1-244
               

               Cow position:
               chr1:5162278-5162024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-244
               

               Cow position:
               chr1:14098568-14098813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               60, 148
               

               Conread position:
               1-244
               

               Cow position:
               chr1:32341433-32341188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 64
               

               Conread position:
               1-244
               

               Cow position:
               chr1:49795779-49796019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               52, 85
               

               Conread position:
               1-244
               

               Cow position:
               chr1:55135611-55135851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               1-244
               

               Cow position:
               chr1:55163697-55163939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               53, 71
               

               Conread position:
               1-244
               

               Cow position:
               chr1:56643814-56643566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               62, 54
               

               Conread position:
               1-244
               

               Cow position:
               chr1:57247212-57247455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 71
               

               Conread position:
               1-244
               

               Cow position:
               chr1:57264212-57263972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               133, 55
               

               Conread position:
               1-244
               

               Cow position:
               chr1:68827131-68826884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               109, 210
               

               Conread position:
               1-244
               

               Cow position:
               chr1:69415942-69415689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 7
               

               Conread position:
               1-244
               

               Cow position:
               chr1:76019907-76019673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               124, 53
               

               Conread position:
               1-244
               

               Cow position:
               chr1:78783321-78783568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-244
               

               Cow position:
               chr1:82504741-82504996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               52, 218
               

               Conread position:
               1-244
               

               Cow position:
               chr1:90423311-90423060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-245
               

               Cow position:
               chr1:1403699-1403460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 59
               

               Conread position:
               1-245
               

               Cow position:
               chr1:3244625-3244871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               58, 120
               

               Conread position:
               1-245
               

               Cow position:
               chr1:24655735-24655979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               1-245
               

               Cow position:
               chr1:29671749-29671500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               52, 83
               

               Conread position:
               1-245
               

               Cow position:
               chr1:33719888-33720136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               55, 177
               

               Conread position:
               1-246
               

               Cow position:
               chr1:6795161-6794899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1-246
               

               Cow position:
               chr1:7143074-7142824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-246
               

               Cow position:
               chr1:11770519-11770270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               53, 69
               

               Conread position:
               1-246
               

               Cow position:
               chr1:11873582-11873339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-246
               

               Cow position:
               chr1:32244624-32244373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               133, 51
               

               Conread position:
               1-246
               

               Cow position:
               chr1:53540165-53540413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               53, 155
               

               Conread position:
               1-246
               

               Cow position:
               chr1:84240674-84240914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               135, 57
               

               Conread position:
               1-247
               

               Cow position:
               chr1:47008805-47009056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               53, 88
               

               Conread position:
               1-248
               

               Cow position:
               chr1:61725338-61725090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 177
               

               Conread position:
               1-253
               

               Cow position:
               chr1:80869881-80870144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               54, 224
               

               Conread position:
               1-261
               

               Cow position:
               chr1:62919951-62920205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               142, 38
               

               Conread position:
               1-261
               

               Cow position:
               chr1:73561875-73561610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               64, 57
               

               Conread position:
               1-262
               

               Cow position:
               chr1:76222916-76222650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-265
               

               Cow position:
               chr1:71135927-71136194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               40, 52
               

               Conread position:
               1-267
               

               Cow position:
               chr1:45535477-45535750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               53, 10
               

               Conread position:
               1-267
               

               Cow position:
               chr1:57635241-57635505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               153, 75
               

               Conread position:
               1-268
               

               Cow position:
               chr1:43380254-43379980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-268
               

               Cow position:
               chr1:99136655-99136386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               62, 7
               

               Conread position:
               1-271
               

               Cow position:
               chr1:71045529-71045802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               137, 203
               

               Conread position:
               1-271
               

               Cow position:
               chr1:98562934-98563209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               1-273
               

               Cow position:
               chr1:31871195-31871477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 274
               

               Conread position:
               1-276
               

               Cow position:
               chr1:76470434-76470705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               124, 57
               

               Conread position:
               1-278
               

               Cow position:
               chr1:90640799-90641090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               53, 222
               

               Conread position:
               1-281
               

               Cow position:
               chr1:26729502-26729775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-286
               

               Cow position:
               chr1:24235746-24235457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               52, 184
               

               Conread position:
               1-290
               

               Cow position:
               chr1:99614222-99614512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               53, 167
               

               Conread position:
               1-292
               

               Cow position:
               chr1:1991650-1991350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               55, 248
               

               Conread position:
               1-292
               

               Cow position:
               chr1:85774234-85774525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               54, 94
               

               Conread position:
               1-293
               

               Cow position:
               chr1:41735850-41735550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               46, 129
               

               Conread position:
               1-294
               

               Cow position:
               chr1:43358240-43357941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               115, 191
               

               Conread position:
               1-294
               

               Cow position:
               chr1:66355934-66355644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               137, 52
               

               Conread position:
               1-294
               

               Cow position:
               chr1:70534159-70533868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               204, 142
               

               Conread position:
               1-294
               

               Cow position:
               chr1:74947342-74947047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               129, 43
               

               Conread position:
               1-294
               

               Cow position:
               chr1:76096214-76096509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               60, 93
               

               Conread position:
               1-294
               

               Cow position:
               chr1:80336472-80336179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               1-294
               

               Cow position:
               chr1:88618368-88618666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               52, 90
               

               Conread position:
               1-294
               

               Cow position:
               chr1:95765314-95765022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               46, 127
               

               Conread position:
               1-295
               

               Cow position:
               chr1:634966-635265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               115, 135
               

               Conread position:
               1-295
               

               Cow position:
               chr1:57305607-57305890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               115, 184
               

               Conread position:
               1-295
               

               Cow position:
               chr1:63390999-63390696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               115, 214
               

               Conread position:
               1-295
               

               Cow position:
               chr1:82406778-82406479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               46, 64
               

               Conread position:
               1-296
               

               Cow position:
               chr1:1165376-1165671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               57, 140
               

               Conread position:
               1-296
               

               Cow position:
               chr1:4032409-4032704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               119, 53
               

               Conread position:
               1-296
               

               Cow position:
               chr1:4290933-4291236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               115, 278
               

               Conread position:
               1-296
               

               Cow position:
               chr1:34300773-34300479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               137, 86
               

               Conread position:
               1-296
               

               Cow position:
               chr1:42138641-42138930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 88
               

               Conread position:
               1-296
               

               Cow position:
               chr1:45007241-45007538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               53, 70
               

               Conread position:
               1-296
               

               Cow position:
               chr1:68217584-68217294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-296
               

               Cow position:
               chr1:85028735-85029026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               285, 14
               

               Conread position:
               1-296
               

               Cow position:
               chr1:85596719-85597010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               62, 55
               

               Conread position:
               1-297
               

               Cow position:
               chr1:42555044-42555339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               115, 67
               

               Conread position:
               1-297
               

               Cow position:
               chr1:80899882-80900193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               221
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-298
               

               Cow position:
               chr1:3790281-3789995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               153, 73
               

               Conread position:
               1-298
               

               Cow position:
               chr1:15547243-15547544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-298
               

               Cow position:
               chr1:20204801-20205101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-298
               

               Cow position:
               chr1:36931934-36932228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-298
               

               Cow position:
               chr1:37707194-37706903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               53, 139
               

               Conread position:
               1-298
               

               Cow position:
               chr1:39418344-39418037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               114, 55
               

               Conread position:
               1-298
               

               Cow position:
               chr1:52994798-52995098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               53, 121
               

               Conread position:
               1-298
               

               Cow position:
               chr1:64678472-64678769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               53, 157
               

               Conread position:
               1-298
               

               Cow position:
               chr1:68253366-68253668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-298
               

               Cow position:
               chr1:68951406-68951699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-298
               

               Cow position:
               chr1:72286275-72285994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               169, 55
               

               Conread position:
               1-298
               

               Cow position:
               chr1:79278667-79278373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               54, 43
               

               Conread position:
               1-298
               

               Cow position:
               chr1:79590875-79591172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 205
               

               Conread position:
               1-298
               

               Cow position:
               chr1:81563508-81563819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               53, 31
               

               Conread position:
               1-298
               

               Cow position:
               chr1:81868952-81868655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 66
               

               Conread position:
               1-298
               

               Cow position:
               chr1:85162773-85162473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               53, 146
               

               Conread position:
               1-298
               

               Cow position:
               chr1:98551488-98551794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 39
               

               Conread position:
               1-298
               

               Cow position:
               chr1:100800131-100800427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               1-299
               

               Cow position:
               chr1:874418-874729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               53, 45
               

               Conread position:
               1-299
               

               Cow position:
               chr1:1185514-1185804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 138
               

               Conread position:
               1-299
               

               Cow position:
               chr1:4539664-4539347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-299
               

               Cow position:
               chr1:20002461-20002157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               115, 83
               

               Conread position:
               1-299
               

               Cow position:
               chr1:31765622-31765298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-299
               

               Cow position:
               chr1:35162178-35162485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               53, 215
               

               Conread position:
               1-299
               

               Cow position:
               chr1:42968543-42968244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               52, 153
               

               Conread position:
               1-299
               

               Cow position:
               chr1:46693881-46693579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 25
               

               Conread position:
               1-299
               

               Cow position:
               chr1:51981002-51981297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               69, 141
               

               Conread position:
               1-299
               

               Cow position:
               chr1:52753391-52753085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               115, 165
               

               Conread position:
               1-299
               

               Cow position:
               chr1:57637147-57637432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               115, 137
               

               Conread position:
               1-299
               

               Cow position:
               chr1:60707178-60707478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 75
               

               Conread position:
               1-299
               

               Cow position:
               chr1:63596285-63595979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               52, 112
               

               Conread position:
               1-299
               

               Cow position:
               chr1:68276181-68276486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 187
               

               Conread position:
               1-299
               

               Cow position:
               chr1:70297046-70297353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               52, 87
               

               Conread position:
               1-299
               

               Cow position:
               chr1:71748232-71747945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               115, 138
               

               Conread position:
               1-299
               

               Cow position:
               chr1:73584627-73584335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               137, 45
               

               Conread position:
               1-299
               

               Cow position:
               chr1:87072479-87072771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-299
               

               Cow position:
               chr1:90864525-90864218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               53, 197
               

               Conread position:
               1-299
               

               Cow position:
               chr1:91816999-91816696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               52, 140
               

               Conread position:
               1-299
               

               Cow position:
               chr1:96478470-96478775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               119, 75
               

               Conread position:
               1-300
               

               Cow position:
               chr1:20384846-20384547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               1-300
               

               Cow position:
               chr1:24729065-24728764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               47, 141
               

               Conread position:
               1-300
               

               Cow position:
               chr1:61175958-61176254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               52, 79
               

               Conread position:
               1-300
               

               Cow position:
               chr1:61392017-61391713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               53, 37
               

               Conread position:
               1-301
               

               Cow position:
               chr1:39427207-39426928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-301
               

               Cow position:
               chr1:89381053-89381352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               142, 49
               

               Conread position:
               1-301
               

               Cow position:
               chr1:102784735-102785031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 91
               

               Conread position:
               1-303
               

               Cow position:
               chr1:70380371-70380064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               219
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               142, 235
               

               Conread position:
               1-303
               

               Cow position:
               chr1:89076861-89076554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               53, 37
               

               Conread position:
               1-304
               

               Cow position:
               chr1:53595100-53595398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               115, 86
               

               Conread position:
               1-305
               

               Cow position:
               chr1:31414184-31413891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               204, 86
               

               Conread position:
               1-305
               

               Cow position:
               chr1:83583163-83582852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               55, 121
               

               Conread position:
               1-305
               

               Cow position:
               chr1:95035581-95035272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               1-306
               

               Cow position:
               chr1:74822226-74822529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               53, 147
               

               Conread position:
               1-313
               

               Cow position:
               chr1:11914103-11913786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               124, 154
               

               Conread position:
               1-313
               

               Cow position:
               chr1:31499402-31499714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               104, 86
               

               Conread position:
               1-313
               

               Cow position:
               chr1:69264596-69264897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               115, 57
               

               Conread position:
               1-322
               

               Cow position:
               chr1:81355929-81355602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               62, 56
               

               Conread position:
               1-326
               

               Cow position:
               chr1:56634873-56635200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               53, 92
               

               Conread position:
               1-327
               

               Cow position:
               chr1:102647494-102647170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               124, 66
               

               Conread position:
               1-335
               

               Cow position:
               chr1:68854949-68855276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               189, 73
               

               Conread position:
               1-336
               

               Cow position:
               chr1:41252628-41252298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               52, 120
               

               Conread position:
               1-336
               

               Cow position:
               chr1:42874172-42873838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               196, 142
               

               Conread position:
               1-336
               

               Cow position:
               chr1:81913377-81913043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               53, 134
               

               Conread position:
               1-339
               

               Cow position:
               chr1:51968245-51968577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 10
               

               Conread position:
               1-339
               

               Cow position:
               chr1:63435031-63434691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               1-339
               

               Cow position:
               chr1:72304596-72304274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-339
               

               Cow position:
               chr1:89349752-89350083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               153, 53
               

               Conread position:
               1-339
               

               Cow position:
               chr1:95176710-95177052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 283
               

               Conread position:
               1-343
               

               Cow position:
               chr1:88652405-88652758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 179
               

               Conread position:
               1-348
               

               Cow position:
               chr1:64251277-64250933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               53, 81
               

               Conread position:
               1-352
               

               Cow position:
               chr1:11226471-11226113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               53, 156
               

               Conread position:
               1-352
               

               Cow position:
               chr1:44769337-44768982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-353
               

               Cow position:
               chr1:80988121-80988482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               62, 55
               

               Conread position:
               1-357
               

               Cow position:
               chr1:47233700-47233342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               247
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               153, 57
               

               Conread position:
               1-357
               

               Cow position:
               chr1:82338009-82337646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               53, 31
               

               Conread position:
               1-357
               

               Cow position:
               chr1:90868661-90868307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               51, 68
               

               Conread position:
               1-360
               

               Cow position:
               chr1:27145879-27145516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 207
               

               Conread position:
               1-361
               

               Cow position:
               chr1:46218358-46218714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               205, 70
               

               Conread position:
               1-370
               

               Cow position:
               chr1:89342218-89341829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               268
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               153, 66
               

               Conread position:
               1-371
               

               Cow position:
               chr1:53308618-53308240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               260
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               66, 109
               

               Conread position:
               1-375
               

               Cow position:
               chr1:16855916-16855544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               62, 54
               

               Conread position:
               1-376
               

               Cow position:
               chr1:52039411-52039791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-381
               

               Cow position:
               chr1:57575993-57575601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 186
               

               Conread position:
               1-383
               

               Cow position:
               chr1:1981335-1980944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 66
               

               Conread position:
               1-383
               

               Cow position:
               chr1:25383437-25383834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 239
               

               Conread position:
               1-383
               

               Cow position:
               chr1:52488186-52487813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               62, 23
               

               Conread position:
               1-383
               

               Cow position:
               chr1:78810810-78811203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               53, 227
               

               Conread position:
               1-383
               

               Cow position:
               chr1:79165316-79164917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               69, 280
               

               Conread position:
               1-384
               

               Cow position:
               chr1:22826944-22827312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 66
               

               Conread position:
               1-385
               

               Cow position:
               chr1:8397-8785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               125, 85
               

               Conread position:
               1-385
               

               Cow position:
               chr1:1956554-1956167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               1-385
               

               Cow position:
               chr1:6941240-6941633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-385
               

               Cow position:
               chr1:6958653-6959046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-385
               

               Cow position:
               chr1:53374210-53374597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               114, 66
               

               Conread position:
               1-385
               

               Cow position:
               chr1:53458481-53458865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               153, 53
               

               Conread position:
               1-385
               

               Cow position:
               chr1:53520681-53521081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               268
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               85, 209
               

               Conread position:
               1-385
               

               Cow position:
               chr1:56225250-56225636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               270
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               142, 57
               

               Conread position:
               1-385
               

               Cow position:
               chr1:68619161-68618768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               53, 24
               

               Conread position:
               1-385
               

               Cow position:
               chr1:68818023-68817633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 24
               

               Conread position:
               1-385
               

               Cow position:
               chr1:70434768-70435153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               39, 163
               

               Conread position:
               1-385
               

               Cow position:
               chr1:72012029-72011655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               115, 43
               

               Conread position:
               1-385
               

               Cow position:
               chr1:97611878-97611497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               71, 57
               

               Conread position:
               1-385
               

               Cow position:
               chr1:100551745-100552133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               64, 57
               

               Conread position:
               1-385
               

               Cow position:
               chr1:101634476-101634866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               60, 169
               

               Conread position:
               1-394
               

               Cow position:
               chr1:13637896-13637489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               281
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-394
               

               Cow position:
               chr1:18937059-18936661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               265
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               53, 158
               

               Conread position:
               1-394
               

               Cow position:
               chr1:43505298-43505700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 80
               

               Conread position:
               1-394
               

               Cow position:
               chr1:50931194-50930804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               153, 52
               

               Conread position:
               1-394
               

               Cow position:
               chr1:62964054-62964444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               275
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               136, 57
               

               Conread position:
               1-394
               

               Cow position:
               chr1:82936807-82936428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               300, 59
               

               Conread position:
               1-394
               

               Cow position:
               chr1:93499397-93499795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               53, 173
               

               Conread position:
               1-394
               

               Cow position:
               chr1:95499721-95499320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               57, 110
               

               Conread position:
               1-395
               

               Cow position:
               chr1:24133281-24132886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               284
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               51, 64
               

               Conread position:
               1-395
               

               Cow position:
               chr1:54478099-54478493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               271
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-398
               

               Cow position:
               chr1:77620325-77620731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               268
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               51, 118
               

               Conread position:
               1-399
               

               Cow position:
               chr1:3323633-3324057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               283
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               57, 166
               

               Conread position:
               1-399
               

               Cow position:
               chr1:16767310-16766903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               277
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               48, 119
               

               Conread position:
               1-399
               

               Cow position:
               chr1:22728822-22729238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 333
               

               Conread position:
               1-399
               

               Cow position:
               chr1:37322230-37321827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 277
               

               Conread position:
               1-399
               

               Cow position:
               chr1:41056459-41056863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               1-399
               

               Cow position:
               chr1:43389273-43388871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-399
               

               Cow position:
               chr1:44506743-44507151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               278
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               62, 22
               

               Conread position:
               1-399
               

               Cow position:
               chr1:48444408-48444008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               152, 59
               

               Conread position:
               1-399
               

               Cow position:
               chr1:51445654-51446065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 55
               

               Conread position:
               1-399
               

               Cow position:
               chr1:53369841-53370267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               278
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               59, 270
               

               Conread position:
               1-399
               

               Cow position:
               chr1:54199608-54199211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               263
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               123, 18
               

               Conread position:
               1-399
               

               Cow position:
               chr1:54258342-54258752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               116, 57
               

               Conread position:
               1-399
               

               Cow position:
               chr1:55705479-55705064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 277
               

               Conread position:
               1-399
               

               Cow position:
               chr1:56477369-56477768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               153, 57
               

               Conread position:
               1-399
               

               Cow position:
               chr1:61005791-61005377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               284
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               54, 220
               

               Conread position:
               1-399
               

               Cow position:
               chr1:61564567-61564964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               278
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               55, 236
               

               Conread position:
               1-399
               

               Cow position:
               chr1:61884690-61885095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 156
               

               Conread position:
               1-399
               

               Cow position:
               chr1:71079182-71078779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 79
               

               Conread position:
               1-399
               

               Cow position:
               chr1:72035154-72034745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               53, 29
               

               Conread position:
               1-399
               

               Cow position:
               chr1:77720458-77720077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               263
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               15, 58
               

               Conread position:
               1-399
               

               Cow position:
               chr1:81290293-81290687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 47
               

               Conread position:
               1-399
               

               Cow position:
               chr1:81569260-81568846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               278
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               53, 186
               

               Conread position:
               1-399
               

               Cow position:
               chr1:84812162-84811758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 125
               

               Conread position:
               1-399
               

               Cow position:
               chr1:86113638-86113213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               48, 78
               

               Conread position:
               1-399
               

               Cow position:
               chr1:89510158-89509745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               280
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               53, 142
               

               Conread position:
               1-399
               

               Cow position:
               chr1:91066374-91065974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               137, 57
               

               Conread position:
               1-399
               

               Cow position:
               chr1:92197235-92197637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               51, 140
               

               Conread position:
               1-399
               

               Cow position:
               chr1:99609140-99609550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               48, 78
               

               Conread position:
               1-399
               

               Cow position:
               chr1:102349983-102349576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               58, 275
               

               Conread position:
               1-404
               

               Cow position:
               chr1:53397762-53398159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               280
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               51, 146
               

               Conread position:
               1-422
               

               Cow position:
               chr1:19516630-19516191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               292
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               51, 231
               

               Conread position:
               1-426
               

               Cow position:
               chr1:10942317-10941887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               282
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               62, 49
               

               Conread position:
               1-426
               

               Cow position:
               chr1:10964069-10964499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               281
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               62, 49
               

               Conread position:
               1-426
               

               Cow position:
               chr1:75744635-75745071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-427
               

               Cow position:
               chr1:70538378-70538811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 394
               

               Conread position:
               1-432
               

               Cow position:
               chr1:45020029-45019589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               1-433
               

               Cow position:
               chr1:12222830-12222388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               277
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               116, 208
               

               Conread position:
               1-433
               

               Cow position:
               chr1:52435045-52435493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               273
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               123, 191
               

               Conread position:
               1-433
               

               Cow position:
               chr1:55229759-55230190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               296
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               120, 190
               

               Conread position:
               1-433
               

               Cow position:
               chr1:79844243-79844697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               319
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-434
               

               Cow position:
               chr1:3924019-3923592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               140, 43
               

               Conread position:
               1-434
               

               Cow position:
               chr1:6077669-6078119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               301
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               53, 154
               

               Conread position:
               1-435
               

               Cow position:
               chr1:34159606-34160046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               292
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               52, 85
               

               Conread position:
               1-435
               

               Cow position:
               chr1:69678551-69678106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               302
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               53, 146
               

               Conread position:
               1-435
               

               Cow position:
               chr1:78857548-78857107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 144
               

               Conread position:
               1-435
               

               Cow position:
               chr1:94226773-94226326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               297
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               134, 84
               

               Conread position:
               1-435
               

               Cow position:
               chr1:96964095-96964540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               301
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               120, 106
               

               Conread position:
               1-436
               

               Cow position:
               chr1:19482298-19481880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               296
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-437
               

               Cow position:
               chr1:10632828-10633261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               285
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               147, 90
               

               Conread position:
               1-446
               

               Cow position:
               chr1:29627140-29626680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               292
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               52, 90
               

               Conread position:
               1-448
               

               Cow position:
               chr1:72069052-72068593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               310
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               153, 54
               

               Conread position:
               1-451
               

               Cow position:
               chr1:61742192-61741732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 57
               

               Conread position:
               1-454
               

               Cow position:
               chr1:29935607-29935152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               304
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               55, 124
               

               Conread position:
               1-454
               

               Cow position:
               chr1:48580906-48581362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               300
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               42, 87
               

               Conread position:
               1-455
               

               Cow position:
               chr1:42887488-42887041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               310
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               52, 86
               

               Conread position:
               1-455
               

               Cow position:
               chr1:74084417-74083949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               320
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               62, 39
               

               Conread position:
               1-456
               

               Cow position:
               chr1:10778348-10778797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               290
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               163, 66
               

               Conread position:
               1-456
               

               Cow position:
               chr1:71119286-71119758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 219
               

               Conread position:
               1-459
               

               Cow position:
               chr1:100400427-100399959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               311
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               123, 197
               

               Conread position:
               1-468
               

               Cow position:
               chr1:47658128-47658600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               300
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               158, 75
               

               Conread position:
               2-129
               

               Cow position:
               chr1:5061797-5061929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               2-198
               

               Cow position:
               chr1:21835724-21835920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               161, 82
               

               Conread position:
               2-198
               

               Cow position:
               chr1:98380801-98380596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               50, 96
               

               Conread position:
               2-200
               

               Cow position:
               chr1:92551358-92551157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               134, 174
               

               Conread position:
               2-200
               

               Cow position:
               chr1:95327377-95327173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-201
               

               Cow position:
               chr1:15311644-15311848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               51, 89
               

               Conread position:
               2-244
               

               Cow position:
               chr1:4573296-4573540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               54, 89
               

               Conread position:
               2-246
               

               Cow position:
               chr1:71818686-71818440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               52, 201
               

               Conread position:
               2-261
               

               Cow position:
               chr1:43839303-43839566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               68, 138
               

               Conread position:
               2-264
               

               Cow position:
               chr1:12871231-12870969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               168, 89
               

               Conread position:
               2-265
               

               Cow position:
               chr1:15691113-15691376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               145, 122
               

               Conread position:
               2-295
               

               Cow position:
               chr1:101551233-101551534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               44, 157
               

               Conread position:
               2-298
               

               Cow position:
               chr1:45289097-45288797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               2-305
               

               Cow position:
               chr1:81613161-81613470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 184
               

               Conread position:
               2-357
               

               Cow position:
               chr1:39069175-39068826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               61, 56
               

               Conread position:
               2-357
               

               Cow position:
               chr1:71253779-71253416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 74
               

               Conread position:
               2-399
               

               Cow position:
               chr1:64804332-64803914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               282
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               52, 323
               

               Conread position:
               2-399
               

               Cow position:
               chr1:101713893-101714299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               280
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               58, 147
               

               Conread position:
               3-129
               

               Cow position:
               chr1:56618903-56618773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               7, 66
               

               Conread position:
               3-129
               

               Cow position:
               chr1:94378810-94378935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               60, 49
               

               Conread position:
               3-152
               

               Cow position:
               chr1:33811711-33811855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               3-201
               

               Cow position:
               chr1:37646223-37646025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               151, 53
               

               Conread position:
               3-236
               

               Cow position:
               chr1:75967213-75967443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               151, 55
               

               Conread position:
               3-239
               

               Cow position:
               chr1:71952864-71953093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               229, 84
               

               Conread position:
               3-242
               

               Cow position:
               chr1:3776837-3776601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 84
               

               Conread position:
               3-247
               

               Cow position:
               chr1:51818718-51818965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               114, 72
               

               Conread position:
               3-248
               

               Cow position:
               chr1:58419709-58419960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               53, 166
               

               Conread position:
               3-284
               

               Cow position:
               chr1:60032821-60032539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               114, 11
               

               Conread position:
               3-285
               

               Cow position:
               chr1:48105657-48105370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               51, 81
               

               Conread position:
               3-290
               

               Cow position:
               chr1:60907138-60907443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               3-294
               

               Cow position:
               chr1:78791529-78791234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               57, 92
               

               Conread position:
               3-295
               

               Cow position:
               chr1:6103136-6102832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               3-296
               

               Cow position:
               chr1:7186564-7186860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 159
               

               Conread position:
               3-296
               

               Cow position:
               chr1:78809660-78809948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               60, 55
               

               Conread position:
               3-297
               

               Cow position:
               chr1:7350315-7350621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               51, 132
               

               Conread position:
               3-299
               

               Cow position:
               chr1:61735662-61735360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               50, 167
               

               Conread position:
               3-300
               

               Cow position:
               chr1:78091813-78092113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               113, 56
               

               Conread position:
               3-303
               

               Cow position:
               chr1:4374562-4374258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               122, 100
               

               Conread position:
               3-305
               

               Cow position:
               chr1:55146578-55146879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               51, 104
               

               Conread position:
               3-313
               

               Cow position:
               chr1:25886298-25885986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               44, 86
               

               Conread position:
               3-381
               

               Cow position:
               chr1:51769862-51770258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 199
               

               Conread position:
               3-385
               

               Cow position:
               chr1:34856852-34856458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               261
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               110, 51
               

               Conread position:
               3-385
               

               Cow position:
               chr1:73960478-73960860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 193
               

               Conread position:
               3-385
               

               Cow position:
               chr1:84282838-84283243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               263
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               10, 203
               

               Conread position:
               3-386
               

               Cow position:
               chr1:70422077-70422475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               262
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               51, 195
               

               Conread position:
               3-398
               

               Cow position:
               chr1:20000972-20000576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               49, 69
               

               Conread position:
               3-399
               

               Cow position:
               chr1:42256733-42256322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               35, 193
               

               Conread position:
               3-399
               

               Cow position:
               chr1:70227925-70227508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 61
               

               Conread position:
               3-399
               

               Cow position:
               chr1:93528467-93528877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               274
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               51, 203
               

               Conread position:
               3-435
               

               Cow position:
               chr1:4691369-4691806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               292
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               47, 37
               

               Conread position:
               3-435
               

               Cow position:
               chr1:97820462-97820904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               293
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               53, 197
               

               Conread position:
               3-438
               

               Cow position:
               chr1:100450409-100449968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               281
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               13, 223
               

               Conread position:
               4-116
               

               Cow position:
               chr1:4619091-4618975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               4-116
               

               Cow position:
               chr1:65637982-65638098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               4-152
               

               Cow position:
               chr1:21092869-21093018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               49, 85
               

               Conread position:
               4-198
               

               Cow position:
               chr1:25793662-25793459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               4-209
               

               Cow position:
               chr1:86614639-86614848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 135
               

               Conread position:
               4-267
               

               Cow position:
               chr1:99807946-99807673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 42
               

               Conread position:
               4-298
               

               Cow position:
               chr1:34771726-34771429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               85, 54
               

               Conread position:
               4-299
               

               Cow position:
               chr1:92437213-92436915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               120, 134
               

               Conread position:
               4-305
               

               Cow position:
               chr1:5135914-5135629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               59, 54
               

               Conread position:
               4-305
               

               Cow position:
               chr1:89937583-89937287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               52, 139
               

               Conread position:
               4-376
               

               Cow position:
               chr1:56229032-56229388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               59, 54
               

               Conread position:
               4-399
               

               Cow position:
               chr1:21787104-21787507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               44, 213
               

               Conread position:
               4-399
               

               Cow position:
               chr1:40599826-40600208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 50
               

               Conread position:
               4-441
               

               Cow position:
               chr1:49317735-49317275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               290
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 217
               

               Conread position:
               5-267
               

               Cow position:
               chr1:98360630-98360353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               49, 188
               

               Conread position:
               5-300
               

               Cow position:
               chr1:26702429-26702131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               96, 267
               

               Conread position:
               5-366
               

               Cow position:
               chr1:93043804-93044162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               251
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               49, 143
               

               Conread position:
               5-383
               

               Cow position:
               chr1:41696833-41697218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 218
               

               Conread position:
               5-385
               

               Cow position:
               chr1:38278267-38277859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 53
               

               Conread position:
               5-385
               

               Cow position:
               chr1:98030693-98031084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               267
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               44, 151
               

               Conread position:
               5-399
               

               Cow position:
               chr1:11728956-11729354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               56, 198
               

               Conread position:
               5-399
               

               Cow position:
               chr1:45555139-45555548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               21, 94
               

               Conread position:
               5-462
               

               Cow position:
               chr1:99642591-99642133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               296
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               55, 202
               

               Conread position:
               5-493
               

               Cow position:
               chr1:92963177-92963652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               58, 53
               

               Conread position:
               6-152
               

               Cow position:
               chr1:14981339-14981195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 66
               

               Conread position:
               6-296
               

               Cow position:
               chr1:7971210-7971484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               237, 48
               

               Conread position:
               6-305
               

               Cow position:
               chr1:84255534-84255848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               50, 146
               

               Conread position:
               6-352
               

               Cow position:
               chr1:98461070-98461415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               48, 107
               

               Conread position:
               7-239
               

               Cow position:
               chr1:53671969-53671721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               45, 125
               

               Conread position:
               7-244
               

               Cow position:
               chr1:22448806-22448561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               56, 51
               

               Conread position:
               7-298
               

               Cow position:
               chr1:91800825-91800526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               47, 277
               

               Conread position:
               7-385
               

               Cow position:
               chr1:6305088-6304710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               46, 203
               

               Conread position:
               7-385
               

               Cow position:
               chr1:15333661-15334055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               8-244
               

               Cow position:
               chr1:77099756-77099527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               140, 50
               

               Conread position:
               8-296
               

               Cow position:
               chr1:16962232-16961938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               46, 201
               

               Conread position:
               8-344
               

               Cow position:
               chr1:97954667-97954349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               8-381
               

               Cow position:
               chr1:14379748-14379387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               146, 33
               

               Conread position:
               8-389
               

               Cow position:
               chr1:31348659-31348264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               260
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               55, 50
               

               Conread position:
               8-455
               

               Cow position:
               chr1:49433483-49433026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               306
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               46, 84
               

               Conread position:
               8-456
               

               Cow position:
               chr1:68845704-68845262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               301
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               114, 173
               

               Conread position:
               8-456
               

               Cow position:
               chr1:81228558-81228103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               46, 68
               

               Conread position:
               9-239
               

               Cow position:
               chr1:94403999-94404229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               135, 49
               

               Conread position:
               9-305
               

               Cow position:
               chr1:37309728-37309438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               54, 49
               

               Conread position:
               9-435
               

               Cow position:
               chr1:36997975-36998404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               275
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               10-211
               

               Cow position:
               chr1:26930191-26929982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 123
               

               Conread position:
               10-399
               

               Cow position:
               chr1:21577588-21577993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               94, 199
               

               Conread position:
               13-136
               

               Cow position:
               chr1:58439262-58439140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               13-294
               

               Cow position:
               chr1:82884603-82884322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               141, 183
               

               Conread position:
               13-357
               

               Cow position:
               chr1:19885171-19885515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               41, 115
               

               Conread position:
               13-385
               

               Cow position:
               chr1:54207032-54206652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               265
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               13-394
               

               Cow position:
               chr1:74956237-74955856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               257
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               36, 67
               

               Conread position:
               14-296
               

               Cow position:
               chr1:95687318-95687023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               14-357
               

               Cow position:
               chr1:83747727-83748075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               26, 127
               

               Conread position:
               14-376
               

               Cow position:
               chr1:34685982-34686329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               49, 44
               

               Conread position:
               15-298
               

               Cow position:
               chr1:3167284-3167002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               39, 152
               

               Conread position:
               16-151
               

               Cow position:
               chr1:99792601-99792740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               16-204
               

               Cow position:
               chr1:61385665-61385861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               16-299
               

               Cow position:
               chr1:26179025-26178736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               39, 136
               

               Conread position:
               17-244
               

               Cow position:
               chr1:95654925-95654693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               37, 189
               

               Conread position:
               17-284
               

               Cow position:
               chr1:71643873-71643603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               37, 151
               

               Conread position:
               17-301
               

               Cow position:
               chr1:62291895-62291624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               46, 41
               

               Conread position:
               18-305
               

               Cow position:
               chr1:100393373-100393082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               36, 140
               

               Conread position:
               18-435
               

               Cow position:
               chr1:197216-196784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               19-390
               

               Cow position:
               chr1:62036593-62036970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               35, 130
               

               Conread position:
               19-433
               

               Cow position:
               chr1:12464871-12464448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               281
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               44, 39
               

               Conread position:
               20-313
               

               Cow position:
               chr1:66430090-66430380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 143
               

               Conread position:
               21-298
               

               Cow position:
               chr1:75141801-75142071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               21-384
               

               Cow position:
               chr1:71295520-71295133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               33, 168
               

               Conread position:
               25-295
               

               Cow position:
               chr1:63138637-63138912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 166
               

               Conread position:
               25-298
               

               Cow position:
               chr1:28563770-28563495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               25-394
               

               Cow position:
               chr1:5597400-5597036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               30, 49
               

               Conread position:
               25-399
               

               Cow position:
               chr1:4414409-4414046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               27-244
               

               Cow position:
               chr1:81470929-81471153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 176
               

               Conread position:
               27-296
               

               Cow position:
               chr1:91039375-91039102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               27-299
               

               Cow position:
               chr1:84906267-84905988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               89, 111
               

               Conread position:
               29-244
               

               Cow position:
               chr1:64421133-64421351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               25, 120
               

               Conread position:
               29-299
               

               Cow position:
               chr1:72103649-72103925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               87, 164
               

               Conread position:
               30-399
               

               Cow position:
               chr1:40192874-40192520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               275, 24
               

               Conread position:
               31-301
               

               Cow position:
               chr1:89497770-89498030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               166, 104
               

               Conread position:
               31-305
               

               Cow position:
               chr1:6788485-6788202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               32-280
               

               Cow position:
               chr1:82443651-82443399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               31, 26
               

               Conread position:
               32-383
               

               Cow position:
               chr1:96277249-96276888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               109, 237
               

               Conread position:
               34-202
               

               Cow position:
               chr1:102113301-102113124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               34-423
               

               Cow position:
               chr1:83072251-83072649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 24
               

               Conread position:
               35-246
               

               Cow position:
               chr1:24413248-24413473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               35-366
               

               Cow position:
               chr1:33331280-33330946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               19, 163
               

               Conread position:
               38-426
               

               Cow position:
               chr1:42398385-42397985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               78, 300
               

               Conread position:
               39-204
               

               Cow position:
               chr1:89082920-89083092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               44-267
               

               Cow position:
               chr1:99039535-99039312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               46-335
               

               Cow position:
               chr1:68763862-68763577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               108, 79
               

               Conread position:
               51-433
               

               Cow position:
               chr1:74319956-74319566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               66, 155
               

               Conread position:
               52-296
               

               Cow position:
               chr1:74927707-74927956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               72, 8
               

               Conread position:
               53-464
               

               Cow position:
               chr1:55429129-55428710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               272
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               71, 354
               

               Conread position:
               54-246
               

               Cow position:
               chr1:69004224-69004420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               54-285
               

               Cow position:
               chr1:91875079-91874851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               99, 27
               

               Conread position:
               54-287
               

               Cow position:
               chr1:69127335-69127103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               63, 31
               

               Conread position:
               54-296
               

               Cow position:
               chr1:92369560-92369810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               54-354
               

               Cow position:
               chr1:101632507-101632205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 15
               

               Conread position:
               54-399
               

               Cow position:
               chr1:89388163-89388526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               49, 97
               

               Conread position:
               54-399
               

               Cow position:
               chr1:90621683-90621323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               54-426
               

               Cow position:
               chr1:59518752-59519122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               84, 15
               

               Conread position:
               54-433
               

               Cow position:
               chr1:20667910-20667531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               100, 15
               

               Conread position:
               54-458
               

               Cow position:
               chr1:33207043-33206632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               272
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               71, 60
               

               Conread position:
               54-460
               

               Cow position:
               chr1:57880961-57880536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               67, 397
               

               Conread position:
               55-427
               

               Cow position:
               chr1:61012142-61012518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               62, 91
               

               Conread position:
               55-434
               

               Cow position:
               chr1:73546074-73545689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               251
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               57, 97
               

               Conread position:
               56-299
               

               Cow position:
               chr1:13810482-13810722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               60, 98
               

               Conread position:
               58-297
               

               Cow position:
               chr1:12978512-12978755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               96, 152
               

               Conread position:
               58-381
               

               Cow position:
               chr1:88913149-88913483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               32, 228
               

               Conread position:
               60-435
               

               Cow position:
               chr1:86110898-86110527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               9, 140
               

               Conread position:
               61-204
               

               Cow position:
               chr1:31960059-31960209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               61-303
               

               Cow position:
               chr1:43703243-43703488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               93, 12
               

               Conread position:
               61-385
               

               Cow position:
               chr1:58754955-58754631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               92, 22
               

               Conread position:
               62-259
               

               Cow position:
               chr1:99062086-99061887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               80, 129
               

               Conread position:
               62-399
               

               Cow position:
               chr1:38753753-38754100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 268
               

               Conread position:
               64-298
               

               Cow position:
               chr1:3882627-3882385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               80, 103
               

               Conread position:
               64-298
               

               Cow position:
               chr1:85647944-85647706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               65-297
               

               Cow position:
               chr1:38401631-38401872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               9, 208
               

               Conread position:
               65-299
               

               Cow position:
               chr1:46036121-46035876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               51, 73
               

               Conread position:
               66-201
               

               Cow position:
               chr1:80311310-80311446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               66-394
               

               Cow position:
               chr1:97090166-97090494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               17, 110
               

               Conread position:
               66-454
               

               Cow position:
               chr1:78096776-78097165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               130, 57
               

               Conread position:
               69-435
               

               Cow position:
               chr1:42175567-42175948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               72, 139
               

               Conread position:
               71-298
               

               Cow position:
               chr1:77683202-77683426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               77, 136
               

               Conread position:
               71-299
               

               Cow position:
               chr1:33409783-33409550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               45, 141
               

               Conread position:
               73-425
               

               Cow position:
               chr1:86682716-86682357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               76, 139
               

               Conread position:
               73-441
               

               Cow position:
               chr1:87197674-87198043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               258
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               123, 71
               

               Conread position:
               74-399
               

               Cow position:
               chr1:64572361-64572697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               79-399
               

               Cow position:
               chr1:91023615-91023285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               75, 170
               

               Conread position:
               82-399
               

               Cow position:
               chr1:8129111-8128796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               61, 69
               

               Conread position:
               83-305
               

               Cow position:
               chr1:87440325-87440548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               113, 208
               

               Conread position:
               83-433
               

               Cow position:
               chr1:78838656-78839002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               71, 10
               

               Conread position:
               87-290
               

               Cow position:
               chr1:85301279-85301483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               66, 82
               

               Conread position:
               87-394
               

               Cow position:
               chr1:89448758-89449074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               88-298
               

               Cow position:
               chr1:89230366-89230157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               78, 48
               

               Conread position:
               90-336
               

               Cow position:
               chr1:41047436-41047191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 61
               

               Conread position:
               93-379
               

               Cow position:
               chr1:56618784-56618495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               61, 110
               

               Conread position:
               95-385
               

               Cow position:
               chr1:79640421-79640122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 23
               

               Conread position:
               104-383
               

               Cow position:
               chr1:20104146-20104431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               49, 85
               

               Conread position:
               107-455
               

               Cow position:
               chr1:261598-261252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               103, 46
               

               Conread position:
               126-298
               

               Cow position:
               chr1:77232668-77232504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               138-305
               

               Cow position:
               chr1:61560810-61560642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               58, 16
               

               Conread position:
               154-432
               

               Cow position:
               chr1:65028463-65028733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 144
               

               Conread position:
               157-380
               

               Cow position:
               chr1:80584365-80584590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               143, 43
               

               Conread position:
               159-390
               

               Cow position:
               chr1:46143526-46143296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               148, 108
               

               Conread position:
               168-516
               

               Cow position:
               chr1:81481439-81481084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               29, 247
               
Show alignments to all cow chromosomes.
Conread position:	1-108
Cow position:	chr1:26934766-26934655 (view UCSC Genome Browser custom track)
Alignm length:	112
Alignm identity:	93
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	52, 0
Conread position:	1-116
Cow position:	chr1:8659423-8659541 (view UCSC Genome Browser custom track)
Alignm length:	120
Alignm identity:	99
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	54, 62
Conread position:	1-120
Cow position:	chr1:71715949-71716072 (view UCSC Genome Browser custom track)
Alignm length:	124
Alignm identity:	97
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	53, 0
Conread position:	1-125
Cow position:	chr1:89835008-89835129 (view UCSC Genome Browser custom track)
Alignm length:	127
Alignm identity:	101
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	30, 85
Conread position:	1-127
Cow position:	chr1:81579538-81579667 (view UCSC Genome Browser custom track)
Alignm length:	130
Alignm identity:	106
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	59, 0
Conread position:	1-128
Cow position:	chr1:85865560-85865685 (view UCSC Genome Browser custom track)
Alignm length:	128
Alignm identity:	98
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	60, 0
Conread position:	1-129
Cow position:	chr1:99105109-99104981 (view UCSC Genome Browser custom track)
Alignm length:	129
Alignm identity:	97
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	1-132
Cow position:	chr1:53650664-53650800 (view UCSC Genome Browser custom track)
Alignm length:	137
Alignm identity:	108
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	52, 0
Conread position:	1-133
Cow position:	chr1:99118160-99118296 (view UCSC Genome Browser custom track)
Alignm length:	137
Alignm identity:	111
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	53, 0
Conread position:	1-134
Cow position:	chr1:32954989-32954858 (view UCSC Genome Browser custom track)
Alignm length:	134
Alignm identity:	104
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	53, 0
Conread position:	1-143
Cow position:	chr1:98577252-98577394 (view UCSC Genome Browser custom track)
Alignm length:	143
Alignm identity:	113
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	0, 0
Conread position:	1-146
Cow position:	chr1:84786545-84786695 (view UCSC Genome Browser custom track)
Alignm length:	152
Alignm identity:	118
Alignm E-value:	8e-25
Alignm gaps (pig, cow):	53, 121
Conread position:	1-147
Cow position:	chr1:62996269-62996415 (view UCSC Genome Browser custom track)
Alignm length:	147
Alignm identity:	111
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	0, 0
Conread position:	1-151
Cow position:	chr1:19545325-19545174 (view UCSC Genome Browser custom track)
Alignm length:	153
Alignm identity:	120
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	62, 57
Conread position:	1-152
Cow position:	chr1:22628863-22628712 (view UCSC Genome Browser custom track)
Alignm length:	156
Alignm identity:	116
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	49, 70
Conread position:	1-153
Cow position:	chr1:25281901-25281750 (view UCSC Genome Browser custom track)
Alignm length:	154
Alignm identity:	120
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	62, 57
Conread position:	1-187
Cow position:	chr1:56711847-56711654 (view UCSC Genome Browser custom track)
Alignm length:	195
Alignm identity:	140
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	52, 84
Conread position:	1-191
Cow position:	chr1:4027636-4027836 (view UCSC Genome Browser custom track)
Alignm length:	202
Alignm identity:	145
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	53, 171
Conread position:	1-193
Cow position:	chr1:36874790-36874984 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	142
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	153, 34
Conread position:	1-194
Cow position:	chr1:85783300-85783496 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	139
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	137, 0