Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rmgp001_g10.5
        

               Conread position:
               1-116
               

               Cow position:
               chr11:18086589-18086474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 58
               

               Conread position:
               1-116
               

               Cow position:
               chr11:41315565-41315450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-116
               

               Cow position:
               chr11:55117222-55117341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-117
               

               Cow position:
               chr11:57481116-57481001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-120
               

               Cow position:
               chr11:49873176-49873297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               52, 88
               

               Conread position:
               1-122
               

               Cow position:
               chr11:81337223-81337097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-128
               

               Cow position:
               chr11:34467352-34467475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-129
               

               Cow position:
               chr11:35282871-35283002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               42, 127
               

               Conread position:
               1-133
               

               Cow position:
               chr11:35881661-35881793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr11:78480546-78480683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               53, 132
               

               Conread position:
               1-134
               

               Cow position:
               chr11:80824917-80825045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               44, 54
               

               Conread position:
               1-138
               

               Cow position:
               chr11:40608971-40608831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               59, 95
               

               Conread position:
               1-150
               

               Cow position:
               chr11:35238578-35238734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr11:15608544-15608389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr11:31227744-31227890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               146, 57
               

               Conread position:
               1-152
               

               Cow position:
               chr11:31885270-31885420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               70, 55
               

               Conread position:
               1-152
               

               Cow position:
               chr11:55348012-55348168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-153
               

               Cow position:
               chr11:6639260-6639413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               123, 57
               

               Conread position:
               1-156
               

               Cow position:
               chr11:7415097-7414944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               57, 103
               

               Conread position:
               1-159
               

               Cow position:
               chr11:72870675-72870834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 6
               

               Conread position:
               1-177
               

               Cow position:
               chr11:11534154-11533977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 96
               

               Conread position:
               1-181
               

               Cow position:
               chr11:7315377-7315192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               1-185
               

               Cow position:
               chr11:39057388-39057567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               1-187
               

               Cow position:
               chr11:35363244-35363439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-187
               

               Cow position:
               chr11:84891003-84890809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-191
               

               Cow position:
               chr11:67931745-67931546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 38
               

               Conread position:
               1-194
               

               Cow position:
               chr11:17192532-17192334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-196
               

               Cow position:
               chr11:43524372-43524569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               54, 77
               

               Conread position:
               1-196
               

               Cow position:
               chr11:50111941-50112139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               54, 87
               

               Conread position:
               1-196
               

               Cow position:
               chr11:51144467-51144669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1-197
               

               Cow position:
               chr11:19508047-19508246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               158
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               142, 57
               

               Conread position:
               1-198
               

               Cow position:
               chr11:7298634-7298437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 102
               

               Conread position:
               1-198
               

               Cow position:
               chr11:57111559-57111355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 72
               

               Conread position:
               1-198
               

               Cow position:
               chr11:58614408-58614615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-198
               

               Cow position:
               chr11:75355359-75355560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               30, 58
               

               Conread position:
               1-202
               

               Cow position:
               chr11:10992029-10992236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 59
               

               Conread position:
               1-202
               

               Cow position:
               chr11:21819695-21819490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 57
               

               Conread position:
               1-202
               

               Cow position:
               chr11:34412846-34413054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               1-202
               

               Cow position:
               chr11:35276050-35276257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 127
               

               Conread position:
               1-202
               

               Cow position:
               chr11:61846255-61846044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               51, 147
               

               Conread position:
               1-203
               

               Cow position:
               chr11:26535524-26535733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               55, 125
               

               Conread position:
               1-203
               

               Cow position:
               chr11:30879429-30879637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 163
               

               Conread position:
               1-203
               

               Cow position:
               chr11:41577259-41577058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-203
               

               Cow position:
               chr11:41598978-41598768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-205
               

               Cow position:
               chr11:71309779-71309569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 165
               

               Conread position:
               1-208
               

               Cow position:
               chr11:63157163-63156947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr11:67951212-67951001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               53, 35
               

               Conread position:
               1-209
               

               Cow position:
               chr11:9221976-9221765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               53, 75
               

               Conread position:
               1-209
               

               Cow position:
               chr11:63520522-63520735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               54, 94
               

               Conread position:
               1-210
               

               Cow position:
               chr11:65495578-65495362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               104, 53
               

               Conread position:
               1-220
               

               Cow position:
               chr11:74929529-74929754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               54, 203
               

               Conread position:
               1-228
               

               Cow position:
               chr11:31352823-31352584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-229
               

               Cow position:
               chr11:62750001-62749774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               60, 147
               

               Conread position:
               1-231
               

               Cow position:
               chr11:49105807-49106041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 55
               

               Conread position:
               1-231
               

               Cow position:
               chr11:75748184-75748418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               115, 150
               

               Conread position:
               1-235
               

               Cow position:
               chr11:25319800-25320044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-238
               

               Cow position:
               chr11:18484410-18484178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               201, 67
               

               Conread position:
               1-239
               

               Cow position:
               chr11:53130561-53130805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               124, 205
               

               Conread position:
               1-239
               

               Cow position:
               chr11:83066245-83066489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               59, 89
               

               Conread position:
               1-242
               

               Cow position:
               chr11:17112877-17112637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               115, 57
               

               Conread position:
               1-242
               

               Cow position:
               chr11:32609741-32609993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               53, 204
               

               Conread position:
               1-242
               

               Cow position:
               chr11:80530120-80530361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               113, 57
               

               Conread position:
               1-242
               

               Cow position:
               chr11:81614883-81614645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               125, 57
               

               Conread position:
               1-243
               

               Cow position:
               chr11:30110717-30110958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               52, 88
               

               Conread position:
               1-243
               

               Cow position:
               chr11:41239525-41239273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               53, 121
               

               Conread position:
               1-243
               

               Cow position:
               chr11:48697197-48697444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               69, 55
               

               Conread position:
               1-243
               

               Cow position:
               chr11:71455537-71455788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               52, 194
               

               Conread position:
               1-243
               

               Cow position:
               chr11:77207798-77208038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               62, 55
               

               Conread position:
               1-243
               

               Cow position:
               chr11:81174639-81174882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               52, 76
               

               Conread position:
               1-244
               

               Cow position:
               chr11:2050329-2050576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               117, 192
               

               Conread position:
               1-244
               

               Cow position:
               chr11:2309623-2309869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               65, 57
               

               Conread position:
               1-244
               

               Cow position:
               chr11:38193901-38194154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-244
               

               Cow position:
               chr11:56518563-56518308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-244
               

               Cow position:
               chr11:59872675-59872927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 99
               

               Conread position:
               1-245
               

               Cow position:
               chr11:71846599-71846351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               53, 211
               

               Conread position:
               1-246
               

               Cow position:
               chr11:56892568-56892820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-247
               

               Cow position:
               chr11:7333972-7333720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               46, 72
               

               Conread position:
               1-247
               

               Cow position:
               chr11:83196248-83196497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 208
               

               Conread position:
               1-248
               

               Cow position:
               chr11:8105532-8105786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               119, 180
               

               Conread position:
               1-248
               

               Cow position:
               chr11:47586596-47586349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               51, 85
               

               Conread position:
               1-248
               

               Cow position:
               chr11:62965804-62965547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 88
               

               Conread position:
               1-248
               

               Cow position:
               chr11:63516573-63516828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-248
               

               Cow position:
               chr11:65857607-65857861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               1-257
               

               Cow position:
               chr11:25331980-25331731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               114, 43
               

               Conread position:
               1-259
               

               Cow position:
               chr11:4412268-4412010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               51, 178
               

               Conread position:
               1-261
               

               Cow position:
               chr11:62979227-62979504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-267
               

               Cow position:
               chr11:11752770-11752497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               53, 78
               

               Conread position:
               1-267
               

               Cow position:
               chr11:38810601-38810329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               50, 223
               

               Conread position:
               1-267
               

               Cow position:
               chr11:70459324-70459583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               69, 76
               

               Conread position:
               1-268
               

               Cow position:
               chr11:16251499-16251223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 91
               

               Conread position:
               1-270
               

               Cow position:
               chr11:50197695-50197410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               57, 211
               

               Conread position:
               1-271
               

               Cow position:
               chr11:171947-171678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               115, 149
               

               Conread position:
               1-272
               

               Cow position:
               chr11:40486184-40485910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 33
               

               Conread position:
               1-276
               

               Cow position:
               chr11:44642536-44642256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-279
               

               Cow position:
               chr11:6154161-6154440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               53, 107
               

               Conread position:
               1-284
               

               Cow position:
               chr11:8339655-8339369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               1-284
               

               Cow position:
               chr11:65430811-65431091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               62, 55
               

               Conread position:
               1-290
               

               Cow position:
               chr11:42793226-42792930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 196
               

               Conread position:
               1-291
               

               Cow position:
               chr11:16910618-16910315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 201
               

               Conread position:
               1-291
               

               Cow position:
               chr11:66897054-66896754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 198
               

               Conread position:
               1-292
               

               Cow position:
               chr11:55333658-55333954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               52, 202
               

               Conread position:
               1-294
               

               Cow position:
               chr11:1849416-1849125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               57, 135
               

               Conread position:
               1-294
               

               Cow position:
               chr11:50951300-50951604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-295
               

               Cow position:
               chr11:8148137-8147851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               137, 25
               

               Conread position:
               1-295
               

               Cow position:
               chr11:14308387-14308687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               46, 123
               

               Conread position:
               1-295
               

               Cow position:
               chr11:62155376-62155686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               62, 56
               

               Conread position:
               1-296
               

               Cow position:
               chr11:1071342-1071042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               51, 85
               

               Conread position:
               1-296
               

               Cow position:
               chr11:3726035-3726337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               52, 79
               

               Conread position:
               1-296
               

               Cow position:
               chr11:10620576-10620279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 104
               

               Conread position:
               1-296
               

               Cow position:
               chr11:13499764-13500064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               104, 57
               

               Conread position:
               1-296
               

               Cow position:
               chr11:15467218-15467507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               14, 157
               

               Conread position:
               1-296
               

               Cow position:
               chr11:15503850-15504161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               53, 238
               

               Conread position:
               1-296
               

               Cow position:
               chr11:26483468-26483760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               115, 67
               

               Conread position:
               1-296
               

               Cow position:
               chr11:30764229-30764539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               53, 228
               

               Conread position:
               1-296
               

               Cow position:
               chr11:32377937-32378236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-296
               

               Cow position:
               chr11:34616018-34616308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               115, 138
               

               Conread position:
               1-296
               

               Cow position:
               chr11:66733585-66733878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               55, 110
               

               Conread position:
               1-296
               

               Cow position:
               chr11:69119049-69119342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 138
               

               Conread position:
               1-296
               

               Cow position:
               chr11:79728924-79728619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               52, 198
               

               Conread position:
               1-297
               

               Cow position:
               chr11:5032028-5031726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               55, 212
               

               Conread position:
               1-297
               

               Cow position:
               chr11:53778362-53778666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               52, 91
               

               Conread position:
               1-297
               

               Cow position:
               chr11:77751018-77750722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-298
               

               Cow position:
               chr11:8428244-8428562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               53, 91
               

               Conread position:
               1-298
               

               Cow position:
               chr11:16000676-16000975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 17
               

               Conread position:
               1-298
               

               Cow position:
               chr11:17831478-17831171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 217
               

               Conread position:
               1-298
               

               Cow position:
               chr11:21497290-21497573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               172, 113
               

               Conread position:
               1-298
               

               Cow position:
               chr11:24937411-24937716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 121
               

               Conread position:
               1-298
               

               Cow position:
               chr11:30912243-30911953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               48, 146
               

               Conread position:
               1-298
               

               Cow position:
               chr11:34962811-34963120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               104, 281
               

               Conread position:
               1-298
               

               Cow position:
               chr11:41271888-41272188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               47, 138
               

               Conread position:
               1-298
               

               Cow position:
               chr11:46746384-46746684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-298
               

               Cow position:
               chr11:53553003-53553269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-298
               

               Cow position:
               chr11:56654297-56654606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               62, 10
               

               Conread position:
               1-298
               

               Cow position:
               chr11:56821507-56821192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               47, 166
               

               Conread position:
               1-298
               

               Cow position:
               chr11:67747031-67747335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               57, 223
               

               Conread position:
               1-298
               

               Cow position:
               chr11:73512670-73512392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               62, 44
               

               Conread position:
               1-298
               

               Cow position:
               chr11:83323323-83323614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               57, 113
               

               Conread position:
               1-299
               

               Cow position:
               chr11:439909-439611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 72
               

               Conread position:
               1-299
               

               Cow position:
               chr11:2788129-2788445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               1-299
               

               Cow position:
               chr11:3720001-3720305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               53, 141
               

               Conread position:
               1-299
               

               Cow position:
               chr11:3780675-3780366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 141
               

               Conread position:
               1-299
               

               Cow position:
               chr11:4436082-4436371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-299
               

               Cow position:
               chr11:6234129-6233828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-299
               

               Cow position:
               chr11:6835277-6835585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               14, 142
               

               Conread position:
               1-299
               

               Cow position:
               chr11:18588831-18588534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               52, 121
               

               Conread position:
               1-299
               

               Cow position:
               chr11:21549245-21549532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               115, 75
               

               Conread position:
               1-299
               

               Cow position:
               chr11:21894404-21894110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               49, 88
               

               Conread position:
               1-299
               

               Cow position:
               chr11:29916287-29916593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               123, 67
               

               Conread position:
               1-299
               

               Cow position:
               chr11:30720847-30721150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               115, 102
               

               Conread position:
               1-299
               

               Cow position:
               chr11:31525614-31525930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               51, 39
               

               Conread position:
               1-299
               

               Cow position:
               chr11:32595216-32595509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               53, 153
               

               Conread position:
               1-299
               

               Cow position:
               chr11:32749857-32750162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               43, 211
               

               Conread position:
               1-299
               

               Cow position:
               chr11:33294042-33293727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               52, 222
               

               Conread position:
               1-299
               

               Cow position:
               chr11:33349952-33349649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               53, 157
               

               Conread position:
               1-299
               

               Cow position:
               chr11:36940851-36940544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               48, 86
               

               Conread position:
               1-299
               

               Cow position:
               chr11:40467374-40467072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               52, 197
               

               Conread position:
               1-299
               

               Cow position:
               chr11:41812162-41811863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               53, 39
               

               Conread position:
               1-299
               

               Cow position:
               chr11:45872569-45872259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-299
               

               Cow position:
               chr11:56728696-56729001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-299
               

               Cow position:
               chr11:61202912-61203217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               53, 141
               

               Conread position:
               1-299
               

               Cow position:
               chr11:70382946-70382639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               52, 239
               

               Conread position:
               1-299
               

               Cow position:
               chr11:80788161-80787855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               121, 74
               

               Conread position:
               1-299
               

               Cow position:
               chr11:81281694-81282009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-299
               

               Cow position:
               chr11:83357142-83357446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               55, 29
               

               Conread position:
               1-300
               

               Cow position:
               chr11:48271944-48272253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-300
               

               Cow position:
               chr11:70303831-70304122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               116, 192
               

               Conread position:
               1-300
               

               Cow position:
               chr11:80761630-80761325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               112, 211
               

               Conread position:
               1-301
               

               Cow position:
               chr11:3833598-3833309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               89, 56
               

               Conread position:
               1-303
               

               Cow position:
               chr11:43897887-43898194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               53, 195
               

               Conread position:
               1-303
               

               Cow position:
               chr11:58588094-58588400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               53, 201
               

               Conread position:
               1-303
               

               Cow position:
               chr11:62151132-62150838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               62, 55
               

               Conread position:
               1-303
               

               Cow position:
               chr11:65987979-65988280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               62, 53
               

               Conread position:
               1-304
               

               Cow position:
               chr11:30596746-30597051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               121, 56
               

               Conread position:
               1-305
               

               Cow position:
               chr11:4323116-4323416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               53, 97
               

               Conread position:
               1-305
               

               Cow position:
               chr11:8828879-8828575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               60, 142
               

               Conread position:
               1-305
               

               Cow position:
               chr11:30120912-30120604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               153, 84
               

               Conread position:
               1-305
               

               Cow position:
               chr11:35684748-35684443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 201
               

               Conread position:
               1-305
               

               Cow position:
               chr11:43430697-43430399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               51, 76
               

               Conread position:
               1-305
               

               Cow position:
               chr11:44036465-44036777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               53, 134
               

               Conread position:
               1-305
               

               Cow position:
               chr11:48474458-48474761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               62, 40
               

               Conread position:
               1-305
               

               Cow position:
               chr11:61454785-61454459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               57, 180
               

               Conread position:
               1-306
               

               Cow position:
               chr11:70836618-70836317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               89, 55
               

               Conread position:
               1-310
               

               Cow position:
               chr11:17321407-17321709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               55, 180
               

               Conread position:
               1-312
               

               Cow position:
               chr11:50778120-50778432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 212
               

               Conread position:
               1-313
               

               Cow position:
               chr11:65409408-65409088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               55, 222
               

               Conread position:
               1-313
               

               Cow position:
               chr11:70273050-70273375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 88
               

               Conread position:
               1-322
               

               Cow position:
               chr11:23128790-23128462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               53, 86
               

               Conread position:
               1-333
               

               Cow position:
               chr11:8840991-8840660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               1-335
               

               Cow position:
               chr11:17278913-17278588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               106, 28
               

               Conread position:
               1-335
               

               Cow position:
               chr11:18572553-18572888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               49, 92
               

               Conread position:
               1-335
               

               Cow position:
               chr11:23138312-23137966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               62, 187
               

               Conread position:
               1-335
               

               Cow position:
               chr11:77128418-77128748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               193, 59
               

               Conread position:
               1-336
               

               Cow position:
               chr11:16342492-16342140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 82
               

               Conread position:
               1-336
               

               Cow position:
               chr11:29947177-29946825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-336
               

               Cow position:
               chr11:34830030-34829697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               42, 58
               

               Conread position:
               1-336
               

               Cow position:
               chr11:64090337-64090009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               53, 156
               

               Conread position:
               1-340
               

               Cow position:
               chr11:11232704-11232359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               238
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               22, 58
               

               Conread position:
               1-348
               

               Cow position:
               chr11:44575987-44575645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               52, 99
               

               Conread position:
               1-348
               

               Cow position:
               chr11:46580116-46580455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               152, 49
               

               Conread position:
               1-349
               

               Cow position:
               chr11:35874235-35873900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               204, 24
               

               Conread position:
               1-352
               

               Cow position:
               chr11:952018-952378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 150
               

               Conread position:
               1-352
               

               Cow position:
               chr11:7589940-7590300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 202
               

               Conread position:
               1-355
               

               Cow position:
               chr11:47544876-47545239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 273
               

               Conread position:
               1-357
               

               Cow position:
               chr11:7924840-7924477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               238
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               53, 152
               

               Conread position:
               1-357
               

               Cow position:
               chr11:20761594-20761959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 75
               

               Conread position:
               1-357
               

               Cow position:
               chr11:23232764-23232405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               249
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               48, 91
               

               Conread position:
               1-357
               

               Cow position:
               chr11:28643831-28644198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 85
               

               Conread position:
               1-357
               

               Cow position:
               chr11:33341396-33341035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 37
               

               Conread position:
               1-357
               

               Cow position:
               chr11:63847599-63847957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               53, 88
               

               Conread position:
               1-357
               

               Cow position:
               chr11:70484112-70483740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               55, 325
               

               Conread position:
               1-360
               

               Cow position:
               chr11:40458870-40459222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               297, 90
               

               Conread position:
               1-360
               

               Cow position:
               chr11:42083229-42083581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-366
               

               Cow position:
               chr11:22978110-22977755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               1-367
               

               Cow position:
               chr11:35154078-35153694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               263
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-374
               

               Cow position:
               chr11:33413983-33414372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               53, 101
               

               Conread position:
               1-376
               

               Cow position:
               chr11:34113024-34113398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               263
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               153, 38
               

               Conread position:
               1-382
               

               Cow position:
               chr11:18707064-18706687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               53, 101
               

               Conread position:
               1-382
               

               Cow position:
               chr11:74316455-74316848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               271
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               52, 96
               

               Conread position:
               1-383
               

               Cow position:
               chr11:1625465-1625079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               197, 74
               

               Conread position:
               1-383
               

               Cow position:
               chr11:20238422-20238819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 91
               

               Conread position:
               1-384
               

               Cow position:
               chr11:17083548-17083171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 134
               

               Conread position:
               1-384
               

               Cow position:
               chr11:30354816-30355188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               52, 121
               

               Conread position:
               1-384
               

               Cow position:
               chr11:44031749-44032151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-384
               

               Cow position:
               chr11:77705515-77705894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               89, 53
               

               Conread position:
               1-384
               

               Cow position:
               chr11:80820249-80819876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 94
               

               Conread position:
               1-385
               

               Cow position:
               chr11:3393461-3393069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 105
               

               Conread position:
               1-385
               

               Cow position:
               chr11:13061474-13061109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 53
               

               Conread position:
               1-385
               

               Cow position:
               chr11:24601719-24602105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 147
               

               Conread position:
               1-385
               

               Cow position:
               chr11:27248240-27248633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 58
               

               Conread position:
               1-385
               

               Cow position:
               chr11:38638870-38639244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 89
               

               Conread position:
               1-385
               

               Cow position:
               chr11:45646844-45646448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 57
               

               Conread position:
               1-385
               

               Cow position:
               chr11:50153069-50152668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-385
               

               Cow position:
               chr11:81300863-81300476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               53, 194
               

               Conread position:
               1-392
               

               Cow position:
               chr11:49152703-49153092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               261
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               62, 51
               

               Conread position:
               1-393
               

               Cow position:
               chr11:36647110-36647481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               53, 161
               

               Conread position:
               1-394
               

               Cow position:
               chr11:17889977-17889573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               60, 210
               

               Conread position:
               1-394
               

               Cow position:
               chr11:21844386-21843985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               278
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               52, 180
               

               Conread position:
               1-394
               

               Cow position:
               chr11:77319173-77319566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 53
               

               Conread position:
               1-394
               

               Cow position:
               chr11:78381297-78380915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               268
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               115, 67
               

               Conread position:
               1-394
               

               Cow position:
               chr11:83397654-83398061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               268
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               117, 51
               

               Conread position:
               1-399
               

               Cow position:
               chr11:866048-866441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               14, 150
               

               Conread position:
               1-399
               

               Cow position:
               chr11:13043392-13042987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               114, 57
               

               Conread position:
               1-399
               

               Cow position:
               chr11:17227890-17227490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               217, 55
               

               Conread position:
               1-399
               

               Cow position:
               chr11:17860404-17859992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               123, 192
               

               Conread position:
               1-399
               

               Cow position:
               chr11:18698624-18699031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               53, 330
               

               Conread position:
               1-399
               

               Cow position:
               chr11:19247445-19247044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               270
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               123, 102
               

               Conread position:
               1-399
               

               Cow position:
               chr11:23251853-23251438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 7
               

               Conread position:
               1-399
               

               Cow position:
               chr11:40818889-40818471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-399
               

               Cow position:
               chr11:45277407-45276987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 215
               

               Conread position:
               1-399
               

               Cow position:
               chr11:48544193-48544597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               1-399
               

               Cow position:
               chr11:48932834-48932428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-399
               

               Cow position:
               chr11:52381121-52380711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               137, 86
               

               Conread position:
               1-399
               

               Cow position:
               chr11:67600517-67600939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               281
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               57, 342
               

               Conread position:
               1-399
               

               Cow position:
               chr11:73354304-73353906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               71, 57
               

               Conread position:
               1-399
               

               Cow position:
               chr11:77745501-77745088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               121, 67
               

               Conread position:
               1-399
               

               Cow position:
               chr11:80564054-80564458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               52, 104
               

               Conread position:
               1-399
               

               Cow position:
               chr11:80923585-80923165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 285
               

               Conread position:
               1-399
               

               Cow position:
               chr11:83043611-83043206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               272
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               153, 66
               

               Conread position:
               1-399
               

               Cow position:
               chr11:84385895-84385479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               60, 10
               

               Conread position:
               1-400
               

               Cow position:
               chr11:64029507-64029107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               114, 159
               

               Conread position:
               1-401
               

               Cow position:
               chr11:66041023-66041433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               260
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               114, 67
               

               Conread position:
               1-401
               

               Cow position:
               chr11:81162682-81162286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 67
               

               Conread position:
               1-401
               

               Cow position:
               chr11:87155265-87155682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               277
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               1-412
               

               Cow position:
               chr11:39499126-39499529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               207, 53
               

               Conread position:
               1-416
               

               Cow position:
               chr11:20601989-20602395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               116, 55
               

               Conread position:
               1-418
               

               Cow position:
               chr11:85723451-85723872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               62, 55
               

               Conread position:
               1-426
               

               Cow position:
               chr11:14649563-14649121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               294
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               114, 98
               

               Conread position:
               1-426
               

               Cow position:
               chr11:30708252-30708692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               62, 55
               

               Conread position:
               1-426
               

               Cow position:
               chr11:66188572-66188132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               298
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               22, 163
               

               Conread position:
               1-428
               

               Cow position:
               chr11:65826982-65826566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               153, 49
               

               Conread position:
               1-429
               

               Cow position:
               chr11:259429-258988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               287
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               57, 43
               

               Conread position:
               1-429
               

               Cow position:
               chr11:15632810-15632368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               57, 310
               

               Conread position:
               1-431
               

               Cow position:
               chr11:10095093-10095537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               291
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               32, 182
               

               Conread position:
               1-432
               

               Cow position:
               chr11:30191919-30192371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 115
               

               Conread position:
               1-433
               

               Cow position:
               chr11:40931-41364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               303
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               49, 26
               

               Conread position:
               1-434
               

               Cow position:
               chr11:27746667-27747114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 225
               

               Conread position:
               1-435
               

               Cow position:
               chr11:36182438-36182891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               303
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               153, 91
               

               Conread position:
               1-435
               

               Cow position:
               chr11:45632015-45631585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               53, 250
               

               Conread position:
               1-436
               

               Cow position:
               chr11:42016889-42016439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               297
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 214
               

               Conread position:
               1-436
               

               Cow position:
               chr11:55052623-55053063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 153
               

               Conread position:
               1-437
               

               Cow position:
               chr11:2907776-2907335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 217
               

               Conread position:
               1-438
               

               Cow position:
               chr11:68910098-68909650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               295
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               115, 86
               

               Conread position:
               1-441
               

               Cow position:
               chr11:35580003-35580457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 371
               

               Conread position:
               1-445
               

               Cow position:
               chr11:55761628-55762060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               47, 88
               

               Conread position:
               1-448
               

               Cow position:
               chr11:75480277-75479814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               292
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               70, 85
               

               Conread position:
               2-238
               

               Cow position:
               chr11:58103024-58102784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               52, 147
               

               Conread position:
               2-246
               

               Cow position:
               chr11:1485610-1485360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 195
               

               Conread position:
               2-248
               

               Cow position:
               chr11:47165387-47165140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               86, 64
               

               Conread position:
               2-264
               

               Cow position:
               chr11:37347225-37347495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               54, 39
               

               Conread position:
               2-285
               

               Cow position:
               chr11:33310721-33311011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               2-294
               

               Cow position:
               chr11:13190971-13191281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               2-298
               

               Cow position:
               chr11:11125414-11125714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               61, 54
               

               Conread position:
               2-298
               

               Cow position:
               chr11:44637010-44636703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               2-299
               

               Cow position:
               chr11:4732089-4732394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               51, 105
               

               Conread position:
               2-299
               

               Cow position:
               chr11:17495995-17495690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               2-303
               

               Cow position:
               chr11:37278449-37278168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 120
               

               Conread position:
               2-313
               

               Cow position:
               chr11:39115244-39115559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               51, 93
               

               Conread position:
               2-352
               

               Cow position:
               chr11:45898304-45897945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               2-356
               

               Cow position:
               chr11:83230636-83230293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               2-357
               

               Cow position:
               chr11:54334085-54334445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               61, 101
               

               Conread position:
               2-364
               

               Cow position:
               chr11:58990261-58990619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               61, 56
               

               Conread position:
               2-385
               

               Cow position:
               chr11:49934991-49934598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               59, 324
               

               Conread position:
               2-385
               

               Cow position:
               chr11:62490184-62490569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               265
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               51, 87
               

               Conread position:
               2-385
               

               Cow position:
               chr11:71868853-71868458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               114, 57
               

               Conread position:
               3-152
               

               Cow position:
               chr11:81042313-81042460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               112, 26
               

               Conread position:
               3-204
               

               Cow position:
               chr11:48901326-48901123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               45, 70
               

               Conread position:
               3-220
               

               Cow position:
               chr11:62019847-62019620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               51, 214
               

               Conread position:
               3-236
               

               Cow position:
               chr11:64334609-64334840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               51, 65
               

               Conread position:
               3-242
               

               Cow position:
               chr11:36496605-36496839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 41
               

               Conread position:
               3-244
               

               Cow position:
               chr11:17968824-17968585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               60, 55
               

               Conread position:
               3-246
               

               Cow position:
               chr11:37068551-37068318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               60, 10
               

               Conread position:
               3-247
               

               Cow position:
               chr11:30934177-30934420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               119, 24
               

               Conread position:
               3-294
               

               Cow position:
               chr11:47193275-47193561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               135, 145
               

               Conread position:
               3-295
               

               Cow position:
               chr11:5226990-5226683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               45, 201
               

               Conread position:
               3-297
               

               Cow position:
               chr11:2083899-2084193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               92, 65
               

               Conread position:
               3-298
               

               Cow position:
               chr11:3233832-3234126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               57, 194
               

               Conread position:
               3-298
               

               Cow position:
               chr11:15285866-15285564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               51, 142
               

               Conread position:
               3-298
               

               Cow position:
               chr11:27939238-27939534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               60, 53
               

               Conread position:
               3-298
               

               Cow position:
               chr11:41986292-41985995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               60, 55
               

               Conread position:
               3-299
               

               Cow position:
               chr11:36981319-36981615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               113, 64
               

               Conread position:
               3-299
               

               Cow position:
               chr11:63469634-63469927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               155, 55
               

               Conread position:
               3-300
               

               Cow position:
               chr11:65157656-65157355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               135, 55
               

               Conread position:
               3-303
               

               Cow position:
               chr11:62225751-62226042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               153, 51
               

               Conread position:
               3-310
               

               Cow position:
               chr11:59702235-59702549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               30, 56
               

               Conread position:
               3-356
               

               Cow position:
               chr11:377897-377525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               254
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               3-357
               

               Cow position:
               chr11:73924807-73924444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 55
               

               Conread position:
               3-375
               

               Cow position:
               chr11:18244190-18243810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               51, 185
               

               Conread position:
               3-385
               

               Cow position:
               chr11:8988478-8988091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               60, 124
               

               Conread position:
               3-385
               

               Cow position:
               chr11:42292084-42291695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               253
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               51, 181
               

               Conread position:
               3-399
               

               Cow position:
               chr11:6400321-6399903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               280
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               51, 98
               

               Conread position:
               3-399
               

               Cow position:
               chr11:42836209-42835792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               74, 400
               

               Conread position:
               3-399
               

               Cow position:
               chr11:63065405-63065813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               277
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               46, 184
               

               Conread position:
               3-401
               

               Cow position:
               chr11:59463884-59463480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               60, 53
               

               Conread position:
               3-435
               

               Cow position:
               chr11:53773424-53773882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               298
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               3-437
               

               Cow position:
               chr11:35348006-35347552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               292
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               53, 211
               

               Conread position:
               4-147
               

               Cow position:
               chr11:75510480-75510335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               50, 8
               

               Conread position:
               4-151
               

               Cow position:
               chr11:37118238-37118390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 25
               

               Conread position:
               4-197
               

               Cow position:
               chr11:84924346-84924144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               50, 182
               

               Conread position:
               4-198
               

               Cow position:
               chr11:46473933-46473728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               4-199
               

               Cow position:
               chr11:1486114-1485913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               4-204
               

               Cow position:
               chr11:25165196-25165399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               150, 189
               

               Conread position:
               4-296
               

               Cow position:
               chr11:4674698-4674397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               53, 210
               

               Conread position:
               4-296
               

               Cow position:
               chr11:25386823-25387117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               138, 37
               

               Conread position:
               4-296
               

               Cow position:
               chr11:36799546-36799258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               121, 80
               

               Conread position:
               4-298
               

               Cow position:
               chr11:1362728-1362417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               4-298
               

               Cow position:
               chr11:36986714-36987000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               50, 165
               

               Conread position:
               4-357
               

               Cow position:
               chr11:71168825-71168486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               61, 54
               

               Conread position:
               4-399
               

               Cow position:
               chr11:30639196-30638791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               48, 167
               

               Conread position:
               4-425
               

               Cow position:
               chr11:2917827-2917408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 49
               

               Conread position:
               4-433
               

               Cow position:
               chr11:47351106-47351530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               113, 86
               

               Conread position:
               4-435
               

               Cow position:
               chr11:44222652-44223081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               281
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               16, 51
               

               Conread position:
               4-437
               

               Cow position:
               chr11:46748114-46747662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 323
               

               Conread position:
               5-134
               

               Cow position:
               chr11:17036799-17036665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               5-289
               

               Cow position:
               chr11:27386586-27386297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               58, 53
               

               Conread position:
               5-298
               

               Cow position:
               chr11:44234111-44234406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               129, 20
               

               Conread position:
               5-298
               

               Cow position:
               chr11:76114408-76114697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               32, 54
               

               Conread position:
               5-385
               

               Cow position:
               chr11:68207084-68206701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               259
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               59, 53
               

               Conread position:
               6-441
               

               Cow position:
               chr11:47899031-47899457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 197
               

               Conread position:
               7-246
               

               Cow position:
               chr11:10076531-10076767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               118, 45
               

               Conread position:
               7-288
               

               Cow position:
               chr11:22932214-22931930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               56, 43
               

               Conread position:
               7-383
               

               Cow position:
               chr11:15016801-15017201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               134, 79
               

               Conread position:
               7-394
               

               Cow position:
               chr11:52297468-52297069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 229
               

               Conread position:
               8-152
               

               Cow position:
               chr11:60302201-60302057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-201
               

               Cow position:
               chr11:62808892-62808692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 50
               

               Conread position:
               8-203
               

               Cow position:
               chr11:36848688-36848887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               108, 61
               

               Conread position:
               8-205
               

               Cow position:
               chr11:41438468-41438260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 72
               

               Conread position:
               8-293
               

               Cow position:
               chr11:63482669-63482384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               108, 203
               

               Conread position:
               8-305
               

               Cow position:
               chr11:34032441-34032145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               108, 51
               

               Conread position:
               8-352
               

               Cow position:
               chr11:30924909-30925266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               55, 50
               

               Conread position:
               8-385
               

               Cow position:
               chr11:8525357-8524973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               258
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               46, 193
               

               Conread position:
               8-433
               

               Cow position:
               chr11:30165265-30165706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 205
               

               Conread position:
               8-453
               

               Cow position:
               chr11:33348430-33347979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               298
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               5, 194
               

               Conread position:
               9-133
               

               Cow position:
               chr11:64405579-64405451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               9-196
               

               Cow position:
               chr11:25336832-25337026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               9-298
               

               Cow position:
               chr11:76606443-76606723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               139, 49
               

               Conread position:
               9-299
               

               Cow position:
               chr11:57725071-57724773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               45, 197
               

               Conread position:
               9-385
               

               Cow position:
               chr11:82940860-82940481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               116, 54
               

               Conread position:
               13-154
               

               Cow position:
               chr11:44575460-44575606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               40, 87
               

               Conread position:
               13-358
               

               Cow position:
               chr11:36659051-36658712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               141, 54
               

               Conread position:
               13-383
               

               Cow position:
               chr11:34120959-34121341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 145
               

               Conread position:
               13-385
               

               Cow position:
               chr11:27405307-27404926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               263
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               41, 134
               

               Conread position:
               13-394
               

               Cow position:
               chr11:62239511-62239895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               136, 31
               

               Conread position:
               13-396
               

               Cow position:
               chr11:67804510-67804901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               42, 177
               

               Conread position:
               14-294
               

               Cow position:
               chr11:1668440-1668717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               140, 178
               

               Conread position:
               15-274
               

               Cow position:
               chr11:955133-955394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               128, 38
               

               Conread position:
               16-296
               

               Cow position:
               chr11:23385480-23385194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               101, 161
               

               Conread position:
               16-299
               

               Cow position:
               chr11:10687123-10686835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               38, 137
               

               Conread position:
               16-303
               

               Cow position:
               chr11:31226029-31225756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               40, 101
               

               Conread position:
               17-247
               

               Cow position:
               chr11:35668953-35668711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               17-296
               

               Cow position:
               chr11:18341273-18340992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               37, 105
               

               Conread position:
               17-399
               

               Cow position:
               chr11:62620150-62620537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               261
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               173, 160
               

               Conread position:
               17-435
               

               Cow position:
               chr11:5961078-5961504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               279
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               32, 54
               

               Conread position:
               18-385
               

               Cow position:
               chr11:36112184-36112563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               267
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               31, 196
               

               Conread position:
               18-394
               

               Cow position:
               chr11:25620629-25620236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               19-244
               

               Cow position:
               chr11:2514825-2514597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               35, 119
               

               Conread position:
               19-335
               

               Cow position:
               chr11:42044223-42043909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               35, 122
               

               Conread position:
               19-374
               

               Cow position:
               chr11:32436096-32436472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               30, 213
               

               Conread position:
               20-399
               

               Cow position:
               chr11:21728499-21728127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               261
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               43, 38
               

               Conread position:
               25-281
               

               Cow position:
               chr11:18591660-18591400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               29, 169
               

               Conread position:
               25-385
               

               Cow position:
               chr11:29960078-29960438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               29, 43
               

               Conread position:
               25-394
               

               Cow position:
               chr11:64044012-64044371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               261
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               29, 175
               

               Conread position:
               26-392
               

               Cow position:
               chr11:38874627-38874267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               99, 12
               

               Conread position:
               27-305
               

               Cow position:
               chr11:69810679-69810961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               27, 131
               

               Conread position:
               28-385
               

               Cow position:
               chr11:19501001-19500659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               28-399
               

               Cow position:
               chr11:81406381-81406006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               102, 163
               

               Conread position:
               29-241
               

               Cow position:
               chr11:17660872-17661084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               34, 163
               

               Conread position:
               29-323
               

               Cow position:
               chr11:23586413-23586717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               29-357
               

               Cow position:
               chr11:2092118-2092444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               29-399
               

               Cow position:
               chr11:39462395-39462780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               25, 306
               

               Conread position:
               30-287
               

               Cow position:
               chr11:2811945-2811690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               95, 39
               

               Conread position:
               30-399
               

               Cow position:
               chr11:34145138-34144758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 98
               

               Conread position:
               30-434
               

               Cow position:
               chr11:2925512-2925111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               284
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               24, 109
               

               Conread position:
               33-298
               

               Cow position:
               chr11:36238563-36238828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               21, 169
               

               Conread position:
               33-298
               

               Cow position:
               chr11:61859118-61858852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               20, 111
               

               Conread position:
               34-400
               

               Cow position:
               chr11:65762814-65762424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               29, 24
               

               Conread position:
               35-379
               

               Cow position:
               chr11:11557952-11558310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               37, 23
               

               Conread position:
               36-266
               

               Cow position:
               chr11:18372862-18373094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               25, 104
               

               Conread position:
               38-305
               

               Cow position:
               chr11:67550578-67550320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 20
               

               Conread position:
               40-360
               

               Cow position:
               chr11:4207101-4207424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               23, 158
               

               Conread position:
               47-433
               

               Cow position:
               chr11:27913070-27913481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 11
               

               Conread position:
               54-203
               

               Cow position:
               chr11:1599193-1599334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               54-296
               

               Cow position:
               chr11:9463635-9463884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               62, 231
               

               Conread position:
               54-296
               

               Cow position:
               chr11:49231680-49231922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               69, 82
               

               Conread position:
               54-310
               

               Cow position:
               chr11:72375882-72375621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               81, 158
               

               Conread position:
               54-326
               

               Cow position:
               chr11:63434252-63433981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               84, 139
               

               Conread position:
               54-354
               

               Cow position:
               chr11:61958943-61958637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               73, 153
               

               Conread position:
               54-400
               

               Cow position:
               chr11:71493054-71492702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               50, 154
               

               Conread position:
               54-458
               

               Cow position:
               chr11:65607887-65607472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               273
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               100, 145
               

               Conread position:
               56-399
               

               Cow position:
               chr11:13592542-13592900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               66, 136
               

               Conread position:
               56-433
               

               Cow position:
               chr11:19592189-19591801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               59, 146
               

               Conread position:
               57-246
               

               Cow position:
               chr11:8936679-8936491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               6, 98
               

               Conread position:
               57-296
               

               Cow position:
               chr11:20684770-20684523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               59, 157
               

               Conread position:
               59-300
               

               Cow position:
               chr11:23272193-23271951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               35, 63
               

               Conread position:
               61-437
               

               Cow position:
               chr11:34646402-34646793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               61, 84
               

               Conread position:
               62-299
               

               Cow position:
               chr11:37804743-37804502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               62-399
               

               Cow position:
               chr11:42296804-42296466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               92, 19
               

               Conread position:
               62-435
               

               Cow position:
               chr11:7873961-7874337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               67-299
               

               Cow position:
               chr11:59862029-59862259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               54, 81
               

               Conread position:
               67-356
               

               Cow position:
               chr11:26845764-26845479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               233, 25
               

               Conread position:
               70-298
               

               Cow position:
               chr11:5286-5514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               16, 31
               

               Conread position:
               70-459
               

               Cow position:
               chr11:26144279-26143876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               54, 109
               

               Conread position:
               71-390
               

               Cow position:
               chr11:9270907-9270584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 189
               

               Conread position:
               72-357
               

               Cow position:
               chr11:30954820-30955113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               73-298
               

               Cow position:
               chr11:48496765-48496542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               17, 33
               

               Conread position:
               75-385
               

               Cow position:
               chr11:30830791-30830473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               81-399
               

               Cow position:
               chr11:45434918-45435236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               164, 9
               

               Conread position:
               85-398
               

               Cow position:
               chr11:48295867-48296185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               59, 181
               

               Conread position:
               87-298
               

               Cow position:
               chr11:11646906-11647123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               66, 143
               

               Conread position:
               91-394
               

               Cow position:
               chr11:71390723-71390420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 211
               

               Conread position:
               93-298
               

               Cow position:
               chr11:55494522-55494730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               93-394
               

               Cow position:
               chr11:51729131-51729428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 105
               

               Conread position:
               95-399
               

               Cow position:
               chr11:35213316-35213010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               102, 22
               

               Conread position:
               98-352
               

               Cow position:
               chr11:69075756-69076022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               46, 164
               

               Conread position:
               111-361
               

               Cow position:
               chr11:47772531-47772275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 213
               

               Conread position:
               115-437
               

               Cow position:
               chr11:62788993-62789325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               29, 251
               

               Conread position:
               125-453
               

               Cow position:
               chr11:83032558-83032893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               141-356
               

               Cow position:
               chr11:28168529-28168313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               57, 25
               

               Conread position:
               146-398
               

               Cow position:
               chr11:39060701-39060445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               147-385
               

               Cow position:
               chr11:31410984-31410735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 207
               

               Conread position:
               160-399
               

               Cow position:
               chr11:33409347-33409105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               178, 34
               

               Conread position:
               166-399
               

               Cow position:
               chr11:17721885-17721640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-116
Cow position:	chr11:18086589-18086474 (view UCSC Genome Browser custom track)
Alignm length:	117
Alignm identity:	97
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	20, 58
Conread position:	1-117
Cow position:	chr11:57481116-57481001 (view UCSC Genome Browser custom track)
Alignm length:	117
Alignm identity:	95
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	29, 0
Conread position:	1-120
Cow position:	chr11:49873176-49873297 (view UCSC Genome Browser custom track)
Alignm length:	124
Alignm identity:	100
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	52, 88
Conread position:	1-122
Cow position:	chr11:81337223-81337097 (view UCSC Genome Browser custom track)
Alignm length:	127
Alignm identity:	103
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	46, 0
Conread position:	1-128
Cow position:	chr11:34467352-34467475 (view UCSC Genome Browser custom track)
Alignm length:	129
Alignm identity:	106
Alignm E-value:	8e-26
Alignm gaps (pig, cow):	62, 57
Conread position:	1-129
Cow position:	chr11:35282871-35283002 (view UCSC Genome Browser custom track)
Alignm length:	133
Alignm identity:	103
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	42, 127
Conread position:	1-133
Cow position:	chr11:35881661-35881793 (view UCSC Genome Browser custom track)
Alignm length:	133
Alignm identity:	100
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	0, 0
Conread position:	1-134
Cow position:	chr11:78480546-78480683 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	108
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	53, 132
Conread position:	1-138
Cow position:	chr11:40608971-40608831 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	117
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	59, 95
Conread position:	1-150
Cow position:	chr11:35238578-35238734 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	117
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	53, 0
Conread position:	1-152
Cow position:	chr11:15608544-15608389 (view UCSC Genome Browser custom track)
Alignm length:	156
Alignm identity:	122
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	53, 0
Conread position:	1-153
Cow position:	chr11:6639260-6639413 (view UCSC Genome Browser custom track)
Alignm length:	156
Alignm identity:	115
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	123, 57
Conread position:	1-156
Cow position:	chr11:7415097-7414944 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	118
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	57, 103
Conread position:	1-159
Cow position:	chr11:72870675-72870834 (view UCSC Genome Browser custom track)
Alignm length:	163
Alignm identity:	120
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	42, 6
Conread position:	1-177
Cow position:	chr11:11534154-11533977 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	131
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	52, 96
Conread position:	1-181
Cow position:	chr11:7315377-7315192 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	130
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	115, 0
Conread position:	1-185
Cow position:	chr11:39057388-39057567 (view UCSC Genome Browser custom track)
Alignm length:	185
Alignm identity:	134
Alignm E-value:	8e-26
Alignm gaps (pig, cow):	66, 0
Conread position:	1-187
Cow position:	chr11:35363244-35363439 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	143
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	55, 0
Conread position:	1-191
Cow position:	chr11:67931745-67931546 (view UCSC Genome Browser custom track)
Alignm length:	201
Alignm identity:	143
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	51, 38
Conread position:	1-194
Cow position:	chr11:17192532-17192334 (view UCSC Genome Browser custom track)
Alignm length:	200
Alignm identity:	140
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	62, 57