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Cow genome map

           
Conread name:
           
Ss1.1-rmgp001_g10.5
        

               
Conread position:
               
1-116
               

               
Cow position:
               
chr23:5151758-5151877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-116
               

               
Cow position:
               
chr23:14896034-14895915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-116
               

               
Cow position:
               
chr23:25363113-25363233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-116
               

               
Cow position:
               
chr23:35366329-35366213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
1-116
               

               
Cow position:
               
chr23:35369241-35369125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
1-120
               

               
Cow position:
               
chr23:11209779-11209900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 105
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr23:29742155-29742280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr23:7937770-7937641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr23:6767660-6767811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 90
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr23:8918083-8917930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 99
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr23:3262729-3262574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr23:39793224-39793372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr23:1545986-1546145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr23:1321424-1321251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr23:5395655-5395473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
53, 131
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr23:12408741-12408541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr23:7392512-7392322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr23:19538224-19538024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
46, 121
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr23:10415256-10415052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr23:344408-344197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr23:37992759-37992962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
115, 79
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr23:3715535-3715752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr23:22530648-22530432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 175
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr23:29824296-29824093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
53, 157
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr23:22588500-22588282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 77
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr23:1430025-1429815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 135
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr23:11080851-11081069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
124, 57
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr23:2259830-2259595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr23:6172892-6172665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
198, 134
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr23:1991657-1991426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr23:10014315-10014546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
134, 35
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr23:353808-353577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr23:38854964-38854722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr23:14739218-14739458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 88
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr23:18367465-18367716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 57
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr23:4338837-4338594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 156
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr23:19002299-19002045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr23:20781594-20781839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
47, 84
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr23:29242716-29242966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 173
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr23:11434486-11434239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
125, 68
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr23:30662858-30662607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
53, 104
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr23:33601754-33601509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
115, 57
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr23:9595058-9594814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr23:15056872-15056623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 57
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr23:3208849-3208599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr23:41285699-41285939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
200, 21
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr23:14191319-14191578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr23:16664780-16664536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
193, 51
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr23:1803560-1803826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
53, 65
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr23:33696005-33695722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
52, 153
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr23:20752782-20753066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr23:2055472-2055760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 88
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr23:3918328-3918037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr23:11045254-11045550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr23:41472379-41472687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr23:2799336-2799649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 104
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr23:8911248-8911531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr23:21336719-21336415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
90, 66
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr23:29521239-29521541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
48, 208
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr23:4529122-4528807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr23:14164630-14164325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
155, 66
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr23:29034083-29034384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
55, 270
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:416930-417218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:1398268-1397968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:1905798-1906114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 90
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:10554241-10553938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
53, 7
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:11845058-11845347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
103, 41
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:13599111-13599411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 207
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:16563612-16563909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
153, 60
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:17404620-17404910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:18322650-18322356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
52, 206
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:20744819-20744522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 57
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:27563939-27563630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
71, 57
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:29459319-29459028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:29626184-29626487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:38455415-38455108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:39775501-39775797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr23:1604993-1605300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 209
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr23:3727632-3727313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr23:4980774-4980475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
147, 74
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr23:5870413-5870121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
47, 88
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr23:7175390-7175682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
115, 137
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr23:7402476-7402772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr23:26849131-26848828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
119, 137
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr23:31601688-31601379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr23:39806642-39806941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr23:40781096-40781402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
153, 176
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr23:8006010-8006321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
115, 213
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr23:16700269-16699964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr23:37065607-37065927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr23:40891131-40891449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 85
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr23:4562653-4562993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr23:6592924-6592600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
115, 53
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr23:5706770-5707105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr23:11315247-11314904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr23:13511503-13511862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr23:33717774-33717406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
52, 213
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr23:9268359-9268720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
53, 190
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr23:6367375-6367757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 311
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr23:16881387-16881008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 40
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr23:26632569-26632964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
53, 199
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr23:4972553-4972932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr23:7845059-7845455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 213
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr23:13520227-13520613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
115, 32
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr23:34315200-34314789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 265
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr23:4968750-4968358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr23:9599272-9599656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 57
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr23:14838965-14838588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
153, 7
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr23:21452963-21452564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 223
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr23:20057097-20056711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
52, 88
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr23:3394720-3394327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr23:8063324-8063701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr23:11129004-11129407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr23:21445891-21446286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr23:22298247-22297857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr23:39302485-39302873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
53, 128
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr23:4579266-4578854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
9, 93
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr23:5617346-5617755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
115, 200
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr23:6244817-6244422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
57, 143
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr23:22804493-22804903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 71
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr23:24509472-24509864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr23:26795134-26794733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
52, 100
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr23:31493648-31494047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
301, 52
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr23:22396676-22396277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 228
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr23:39752884-39753306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
57, 168
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr23:15742869-15743299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
152, 55
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr23:16583139-16582701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
123, 66
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr23:186941-187393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
51, 327
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr23:1428586-1429030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
135, 68
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr23:15287364-15286917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 158
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr23:3247358-3247834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
153, 59
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr23:5603501-5603057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
195, 68
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr23:1337534-1337051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
2-193
               

               
Cow position:
               
chr23:4608611-4608415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
54, 80
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr23:1690559-1690769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
52, 202
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr23:1885405-1885104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
52, 202
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr23:12050136-12050425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
115, 144
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr23:1254448-1254758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 98
               

               
Conread position:
               
2-360
               

               
Cow position:
               
chr23:25358502-25358852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 92
               

               
Conread position:
               
2-361
               

               
Cow position:
               
chr23:24867073-24867444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
2-385
               

               
Cow position:
               
chr23:26986503-26986103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
54, 167
               

               
Conread position:
               
2-395
               

               
Cow position:
               
chr23:29345989-29345603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 197
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr23:8698214-8698605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
2-440
               

               
Cow position:
               
chr23:15872930-15872496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 230
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr23:25864913-25864465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
3-139
               

               
Cow position:
               
chr23:1610624-1610763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
3-145
               

               
Cow position:
               
chr23:9421169-9421025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
3-152
               

               
Cow position:
               
chr23:221842-221990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 52
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr23:21343478-21343280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr23:26319189-26319390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 149
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr23:16237488-16237234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr23:19979175-19978937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
53, 137
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr23:36129131-36128845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr23:5162204-5162500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
121, 51
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr23:24704051-24704355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
60, 55
               

               
Conread position:
               
3-339
               

               
Cow position:
               
chr23:1924064-1923725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
60, 55
               

               
Conread position:
               
3-367
               

               
Cow position:
               
chr23:28206383-28206746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 53
               

               
Conread position:
               
3-374
               

               
Cow position:
               
chr23:10852824-10853201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
113, 56
               

               
Conread position:
               
3-383
               

               
Cow position:
               
chr23:534001-534388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 55
               

               
Conread position:
               
3-385
               

               
Cow position:
               
chr23:21788999-21788602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
52, 177
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr23:26948962-26949364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 206
               

               
Conread position:
               
3-430
               

               
Cow position:
               
chr23:4499364-4498921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 166
               

               
Conread position:
               
3-433
               

               
Cow position:
               
chr23:8293273-8293726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
53, 108
               

               
Conread position:
               
3-435
               

               
Cow position:
               
chr23:39778185-39778611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 47
               

               
Conread position:
               
3-435
               

               
Cow position:
               
chr23:40778034-40778478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
51, 200
               

               
Conread position:
               
3-458
               

               
Cow position:
               
chr23:2282402-2281942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
53, 34
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr23:32961596-32961385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
56, 205
               

               
Conread position:
               
4-244
               

               
Cow position:
               
chr23:670393-670636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
50, 135
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr23:6995201-6994914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
62, 54
               

               
Conread position:
               
4-299
               

               
Cow position:
               
chr23:18802500-18802198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr23:25378429-25378732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr23:11473736-11473396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
4-433
               

               
Cow position:
               
chr23:2502075-2501644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
5-127
               

               
Cow position:
               
chr23:3168022-3168145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr23:1878097-1877911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
58, 53
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr23:15728915-15728721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr23:1068538-1068304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
99, 7
               

               
Conread position:
               
5-326
               

               
Cow position:
               
chr23:27544606-27544926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 53
               

               
Conread position:
               
5-399
               

               
Cow position:
               
chr23:25675909-25675517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
138, 31
               

               
Conread position:
               
5-435
               

               
Cow position:
               
chr23:1883167-1883606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 161
               

               
Conread position:
               
7-385
               

               
Cow position:
               
chr23:5723319-5723701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 51
               

               
Conread position:
               
8-218
               

               
Cow position:
               
chr23:2457236-2457450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
9, 181
               

               
Conread position:
               
8-299
               

               
Cow position:
               
chr23:40502736-40502443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
45, 133
               

               
Conread position:
               
8-313
               

               
Cow position:
               
chr23:36309202-36309509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
55, 50
               

               
Conread position:
               
9-300
               

               
Cow position:
               
chr23:16690284-16689995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
44, 143
               

               
Conread position:
               
13-205
               

               
Cow position:
               
chr23:12290064-12290260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 128
               

               
Conread position:
               
13-229
               

               
Cow position:
               
chr23:406379-406170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 43
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr23:8959378-8959670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 130
               

               
Conread position:
               
13-385
               

               
Cow position:
               
chr23:1489838-1490202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
141, 45
               

               
Conread position:
               
13-400
               

               
Cow position:
               
chr23:4504609-4504993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 131
               

               
Conread position:
               
14-303
               

               
Cow position:
               
chr23:1290077-1290373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
14-310
               

               
Cow position:
               
chr23:21659720-21660024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 237
               

               
Conread position:
               
14-461
               

               
Cow position:
               
chr23:29801215-29801673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
103, 186
               

               
Conread position:
               
17-357
               

               
Cow position:
               
chr23:3967764-3967429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
230, 41
               

               
Conread position:
               
17-433
               

               
Cow position:
               
chr23:18902265-18901852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
41, 180
               

               
Conread position:
               
18-313
               

               
Cow position:
               
chr23:40648941-40648643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
19-296
               

               
Cow position:
               
chr23:18296595-18296875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
20-208
               

               
Cow position:
               
chr23:22399190-22399385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 138
               

               
Conread position:
               
22-369
               

               
Cow position:
               
chr23:1776840-1776493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 184
               

               
Conread position:
               
23-296
               

               
Cow position:
               
chr23:3191332-3191056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
104, 33
               

               
Conread position:
               
25-208
               

               
Cow position:
               
chr23:1700704-1700887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
25-367
               

               
Cow position:
               
chr23:21764711-21765062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
26-295
               

               
Cow position:
               
chr23:24930278-24930004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
30, 139
               

               
Conread position:
               
26-388
               

               
Cow position:
               
chr23:4646308-4646674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
28, 136
               

               
Conread position:
               
29-299
               

               
Cow position:
               
chr23:16631062-16631341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 186
               

               
Conread position:
               
29-394
               

               
Cow position:
               
chr23:20248902-20248521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 323
               

               
Conread position:
               
31-300
               

               
Cow position:
               
chr23:36017942-36018223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
23, 187
               

               
Conread position:
               
31-450
               

               
Cow position:
               
chr23:40443665-40444087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
18, 115
               

               
Conread position:
               
33-217
               

               
Cow position:
               
chr23:30999377-30999571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
33-385
               

               
Cow position:
               
chr23:5451123-5451486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 182
               

               
Conread position:
               
37-299
               

               
Cow position:
               
chr23:22496761-22496489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
37-300
               

               
Cow position:
               
chr23:19371265-19371002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 82
               

               
Conread position:
               
47-400
               

               
Cow position:
               
chr23:3282299-3281931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
54-298
               

               
Cow position:
               
chr23:2488158-2487921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
77, 93
               

               
Conread position:
               
54-382
               

               
Cow position:
               
chr23:39049602-39049279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
54-399
               

               
Cow position:
               
chr23:5426254-5426617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
54-399
               

               
Cow position:
               
chr23:8923430-8923779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
63, 140
               

               
Conread position:
               
54-399
               

               
Cow position:
               
chr23:33569962-33570311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
100, 47
               

               
Conread position:
               
56-244
               

               
Cow position:
               
chr23:39028604-39028797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 155
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr23:12334037-12334339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
62-326
               

               
Cow position:
               
chr23:1767661-1767927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
63-394
               

               
Cow position:
               
chr23:7360950-7361268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
73-298
               

               
Cow position:
               
chr23:1921385-1921156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 122
               

               
Conread position:
               
73-298
               

               
Cow position:
               
chr23:4329839-4329604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
73-395
               

               
Cow position:
               
chr23:18286039-18286357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
77-298
               

               
Cow position:
               
chr23:39083299-39083522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
80-385
               

               
Cow position:
               
chr23:35938190-35938496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
10, 246
               

               
Conread position:
               
88-298
               

               
Cow position:
               
chr23:3409047-3408840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
106, 48
               

               
Conread position:
               
88-450
               

               
Cow position:
               
chr23:12363761-12363385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
65, 370
               

               
Conread position:
               
98-399
               

               
Cow position:
               
chr23:5732417-5732717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 169
               

               
Conread position:
               
107-394
               

               
Cow position:
               
chr23:5795354-5795649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 146
               

               
Conread position:
               
123-306
               

               
Cow position:
               
chr23:1222347-1222158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
141-433
               

               
Cow position:
               
chr23:11212421-11212717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
141-453
               

               
Cow position:
               
chr23:17486911-17486594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
154-395
               

               
Cow position:
               
chr23:5881591-5881347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
163, 153
               

               
Conread position:
               
156-455
               

               
Cow position:
               
chr23:24966537-24966231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 208
               

               
Conread position:
               
159-395
               

               
Cow position:
               
chr23:16961228-16961460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 156
               

               
Conread position:
               
165-385
               

               
Cow position:
               
chr23:20539321-20539543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
36, 194
               

               
Conread position:
               
167-298
               

               
Cow position:
               
chr23:35369105-35368975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
216-384
               

               
Cow position:
               
chr23:4501741-4501907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
84, 121
               
Show alignments to all cow chromosomes.