Cow genome map

Conread name: Ss1.1-rmgp001_g10.5

Conread position: 1-114
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-117
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 1-134
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 87

Conread position: 1-137
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 1-151
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 21

Conread position: 1-152
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 52, 88

Conread position: 1-152
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 53, 21

Conread position: 1-182
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 114, 67

Conread position: 1-192
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 114, 11

Conread position: 1-193
Cow position:
Alignm length: 198
Alignm identity: 149
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 61, 55

Conread position: 1-193
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 54, 126

Conread position: 1-199
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 191

Conread position: 1-201
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 1-202
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 56

Conread position: 1-205
Cow position:
Alignm length: 214
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 1-208
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 214

Conread position: 1-220
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 205

Conread position: 1-231
Cow position:
Alignm length: 234
Alignm identity: 177
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 62, 57

Conread position: 1-233
Cow position:
Alignm length: 239
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 147

Conread position: 1-238
Cow position:
Alignm length: 242
Alignm identity: 168
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 152, 55

Conread position: 1-239
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 54, 187

Conread position: 1-243
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 1-244
Cow position:
Alignm length: 257
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 1-244
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 53, 210

Conread position: 1-244
Cow position:
Alignm length: 252
Alignm identity: 171
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 64, 58

Conread position: 1-244
Cow position:
Alignm length: 258
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 104

Conread position: 1-246
Cow position:
Alignm length: 256
Alignm identity: 175
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 53

Conread position: 1-247
Cow position:
Alignm length: 249
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 138, 21

Conread position: 1-248
Cow position:
Alignm length: 252
Alignm identity: 170
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 62, 57

Conread position: 1-261
Cow position:
Alignm length: 266
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 153, 65

Conread position: 1-266
Cow position:
Alignm length: 271
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 120

Conread position: 1-267
Cow position:
Alignm length: 272
Alignm identity: 179
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 57

Conread position: 1-282
Cow position:
Alignm length: 283
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 83

Conread position: 1-283
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 117, 57

Conread position: 1-287
Cow position:
Alignm length: 299
Alignm identity: 214
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 52, 198

Conread position: 1-294
Cow position:
Alignm length: 305
Alignm identity: 199
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 95, 54

Conread position: 1-295
Cow position:
Alignm length: 306
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 71

Conread position: 1-295
Cow position:
Alignm length: 297
Alignm identity: 210
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 62, 57

Conread position: 1-296
Cow position:
Alignm length: 300
Alignm identity: 196
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 53, 117

Conread position: 1-296
Cow position:
Alignm length: 309
Alignm identity: 206
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 152, 117

Conread position: 1-296
Cow position:
Alignm length: 305
Alignm identity: 203
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 36, 195

Conread position: 1-297
Cow position:
Alignm length: 308
Alignm identity: 207
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 53, 210

Conread position: 1-298
Cow position:
Alignm length: 307
Alignm identity: 205
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 114, 57

Conread position: 1-298
Cow position:
Alignm length: 310
Alignm identity: 215
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 90

Conread position: 1-298
Cow position:
Alignm length: 300
Alignm identity: 203
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 166, 22

Conread position: 1-299
Cow position:
Alignm length: 310
Alignm identity: 207
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 87

Conread position: 1-299
Cow position:
Alignm length: 311
Alignm identity: 210
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 53, 197

Conread position: 1-299
Cow position:
Alignm length: 304
Alignm identity: 206
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 115, 67

Conread position: 1-299
Cow position:
Alignm length: 305
Alignm identity: 202
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 119, 35

Conread position: 1-299
Cow position:
Alignm length: 304
Alignm identity: 202
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 110, 86

Conread position: 1-299
Cow position:
Alignm length: 308
Alignm identity: 203
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 194

Conread position: 1-300
Cow position:
Alignm length: 312
Alignm identity: 209
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 54, 227

Conread position: 1-305
Cow position:
Alignm length: 312
Alignm identity: 199
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 57, 86

Conread position: 1-305
Cow position:
Alignm length: 310
Alignm identity: 212
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 137, 57

Conread position: 1-305
Cow position:
Alignm length: 310
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 154, 0

Conread position: 1-335
Cow position:
Alignm length: 343
Alignm identity: 227
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 153, 36

Conread position: 1-347
Cow position:
Alignm length: 365
Alignm identity: 235
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 57

Conread position: 1-356
Cow position:
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 219

Conread position: 1-357
Cow position:
Alignm length: 368
Alignm identity: 243
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 55, 157

Conread position: 1-357
Cow position:
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 333

Conread position: 1-358
Cow position:
Alignm length: 375
Alignm identity: 252
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 55, 121

Conread position: 1-383
Cow position:
Alignm length: 395
Alignm identity: 243
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 117

Conread position: 1-385
Cow position:
Alignm length: 392
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 43

Conread position: 1-385
Cow position:
Alignm length: 418
Alignm identity: 273
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 73

Conread position: 1-385
Cow position:
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 131

Conread position: 1-385
Cow position:
Alignm length: 392
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 221

Conread position: 1-392
Cow position:
Alignm length: 402
Alignm identity: 256
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 57

Conread position: 1-394
Cow position:
Alignm length: 410
Alignm identity: 267
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 127

Conread position: 1-394
Cow position:
Alignm length: 404
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 117

Conread position: 1-394
Cow position:
Alignm length: 405
Alignm identity: 276
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 52, 94

Conread position: 1-398
Cow position:
Alignm length: 413
Alignm identity: 276
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 153, 79

Conread position: 1-399
Cow position:
Alignm length: 424
Alignm identity: 278
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 117, 57

Conread position: 1-399
Cow position:
Alignm length: 417
Alignm identity: 276
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 52, 89

Conread position: 1-399
Cow position:
Alignm length: 406
Alignm identity: 265
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 112, 10

Conread position: 1-399
Cow position:
Alignm length: 409
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 57

Conread position: 1-427
Cow position:
Alignm length: 437
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 57

Conread position: 1-428
Cow position:
Alignm length: 445
Alignm identity: 280
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 209

Conread position: 1-433
Cow position:
Alignm length: 446
Alignm identity: 283
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 200, 24

Conread position: 1-433
Cow position:
Alignm length: 440
Alignm identity: 282
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 61, 55

Conread position: 1-436
Cow position:
Alignm length: 446
Alignm identity: 295
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 52, 147

Conread position: 1-451
Cow position:
Alignm length: 461
Alignm identity: 301
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 51, 62

Conread position: 1-502
Cow position:
Alignm length: 510
Alignm identity: 326
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 123, 86

Conread position: 3-239
Cow position:
Alignm length: 239
Alignm identity: 179
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 60, 53

Conread position: 3-244
Cow position:
Alignm length: 248
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 127, 64

Conread position: 3-247
Cow position:
Alignm length: 259
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 3-295
Cow position:
Alignm length: 303
Alignm identity: 202
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 16, 186

Conread position: 3-296
Cow position:
Alignm length: 300
Alignm identity: 200
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 101, 55

Conread position: 3-300
Cow position:
Alignm length: 306
Alignm identity: 211
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 139

Conread position: 3-305
Cow position:
Alignm length: 314
Alignm identity: 205
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 206

Conread position: 3-322
Cow position:
Alignm length: 330
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 80

Conread position: 3-399
Cow position:
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 35

Conread position: 3-440
Cow position:
Alignm length: 454
Alignm identity: 288
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 88

Conread position: 4-182
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 146

Conread position: 4-196
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 112, 134

Conread position: 4-265
Cow position:
Alignm length: 271
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 210

Conread position: 4-297
Cow position:
Alignm length: 303
Alignm identity: 204
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 120, 83

Conread position: 4-357
Cow position:
Alignm length: 367
Alignm identity: 242
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 194

Conread position: 4-385
Cow position:
Alignm length: 405
Alignm identity: 272
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 50, 205

Conread position: 4-399
Cow position:
Alignm length: 411
Alignm identity: 273
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 50, 117

Conread position: 5-244
Cow position:
Alignm length: 247
Alignm identity: 162
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 106, 154

Conread position: 6-211
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 74

Conread position: 6-296
Cow position:
Alignm length: 295
Alignm identity: 191
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 73

Conread position: 6-385
Cow position:
Alignm length: 389
Alignm identity: 248
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 148, 92

Conread position: 7-298
Cow position:
Alignm length: 297
Alignm identity: 190
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 56, 7

Conread position: 8-314
Cow position:
Alignm length: 313
Alignm identity: 203
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 87

Conread position: 8-384
Cow position:
Alignm length: 389
Alignm identity: 266
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 47, 115

Conread position: 8-400
Cow position:
Alignm length: 414
Alignm identity: 281
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 46, 270

Conread position: 8-441
Cow position:
Alignm length: 447
Alignm identity: 297
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 45, 83

Conread position: 13-275
Cow position:
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 13-385
Cow position:
Alignm length: 387
Alignm identity: 260
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 41, 21

Conread position: 14-240
Cow position:
Alignm length: 240
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 18-460
Cow position:
Alignm length: 477
Alignm identity: 320
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 120, 45

Conread position: 25-352
Cow position:
Alignm length: 341
Alignm identity: 230
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 248

Conread position: 25-399
Cow position:
Alignm length: 384
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 25

Conread position: 28-244
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 30-297
Cow position:
Alignm length: 274
Alignm identity: 198
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 114, 27

Conread position: 31-399
Cow position:
Alignm length: 389
Alignm identity: 248
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 96, 65

Conread position: 40-352
Cow position:
Alignm length: 323
Alignm identity: 208
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 23, 18

Conread position: 51-296
Cow position:
Alignm length: 251
Alignm identity: 164
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 66, 138

Conread position: 51-435
Cow position:
Alignm length: 393
Alignm identity: 243
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 66, 81

Conread position: 54-370
Cow position:
Alignm length: 330
Alignm identity: 228
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 87, 0

Conread position: 54-400
Cow position:
Alignm length: 353
Alignm identity: 232
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 75, 158

Conread position: 55-243
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 56-399
Cow position:
Alignm length: 363
Alignm identity: 242
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 67, 5

Conread position: 58-356
Cow position:
Alignm length: 312
Alignm identity: 208
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 80, 98

Conread position: 59-385
Cow position:
Alignm length: 331
Alignm identity: 221
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 137, 14

Conread position: 70-394
Cow position:
Alignm length: 332
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 74

Conread position: 71-385
Cow position:
Alignm length: 329
Alignm identity: 209
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 73-357
Cow position:
Alignm length: 297
Alignm identity: 206
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 81, 200

Conread position: 73-385
Cow position:
Alignm length: 320
Alignm identity: 211
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 81, 37

Conread position: 74-246
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 75, 69

Conread position: 74-394
Cow position:
Alignm length: 326
Alignm identity: 215
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 64, 229

Conread position: 80-455
Cow position:
Alignm length: 391
Alignm identity: 244
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 74, 13

Conread position: 84-348
Cow position:
Alignm length: 276
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 70, 26

Conread position: 100-306
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 124

Conread position: 109-393
Cow position:
Alignm length: 303
Alignm identity: 204
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 160

Conread position: 125-356
Cow position:
Alignm length: 241
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 126-395
Cow position:
Alignm length: 282
Alignm identity: 189
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 83

Conread position: 140-383
Cow position:
Alignm length: 248
Alignm identity: 168
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 10

Conread position: 151-447
Cow position:
Alignm length: 304
Alignm identity: 196
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 149, 9

Conread position: 165-433
Cow position:
Alignm length: 273
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 28

Conread position: 171-367
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.