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Cow genome map

           
Conread name:
           
Ss1.1-rmgp001_g10.5
        

               
Conread position:
               
1-117
               

               
Cow position:
               
chr29:686425-686309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-121
               

               
Cow position:
               
chr29:16735239-16735115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr29:45588706-45588580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-129
               

               
Cow position:
               
chr29:2626160-2626032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr29:36356618-36356746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-133
               

               
Cow position:
               
chr29:29066193-29066325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr29:18085357-18085508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
49, 92
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr29:18748820-18748665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr29:32308556-32308405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr29:43252921-43252769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 85
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr29:6813208-6813362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
42, 138
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr29:13458825-13458977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 57
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr29:3502824-3502975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr29:22720894-22721058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr29:19338746-19338950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
53, 126
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr29:477869-478070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
46, 175
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr29:5919558-5919356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 141
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr29:19254056-19253854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr29:20674039-20673834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 79
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr29:26130550-26130749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 124
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr29:35434637-35434833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
57, 140
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:4065854-4066053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:19389253-19389454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
116, 36
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr29:26984994-26985195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr29:2644541-2644330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr29:9686234-9686028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr29:16756821-16757030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 184
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr29:7041068-7040871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 36
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr29:21236883-21237090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr29:32963321-32963531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 127
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr29:6472082-6472291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 64
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr29:3395877-3396084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
153, 66
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr29:4805000-4805211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr29:45650576-45650362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:21000408-21000627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
46, 194
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr29:41076261-41076046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 139
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr29:20933472-20933700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
53, 159
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr29:35281267-35281496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
115, 69
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr29:1956322-1956082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
49, 134
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr29:4194354-4194097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 100
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr29:16359380-16359632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr29:18364620-18364394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 54
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr29:2623713-2623467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 143
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr29:11704889-11705133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
52, 71
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr29:20178357-20178122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr29:35738503-35738260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 148
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr29:13553899-13554154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr29:18212216-18211978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 88
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr29:94782-94543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr29:4328201-4328432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr29:11787559-11787814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr29:18072696-18072958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr29:26129265-26129513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 169
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr29:29302887-29302644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr29:42848994-42849239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
140, 57
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr29:17338-17078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
49, 154
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr29:26329981-26330241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
153, 22
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr29:32521635-32521909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr29:37961211-37960939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 54
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr29:6775218-6774961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr29:1395372-1395635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
162, 51
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr29:24119970-24119696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 89
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr29:31926523-31926241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr29:11136122-11135847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr29:16195619-16195896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
115, 66
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr29:3502323-3502629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
53, 149
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr29:4367487-4367788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr29:9638545-9638258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr29:1933790-1933507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
123, 156
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr29:13372430-13372728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr29:23984196-23983891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr29:25088520-25088807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
153, 134
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr29:25474674-25474987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr29:34773961-34773673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
134, 49
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr29:2984651-2984955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr29:24103782-24103476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
55, 183
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr29:41811811-41811525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr29:356093-356387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr29:2071802-2071505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
124, 66
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr29:4875136-4874813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr29:6293701-6293412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
114, 52
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr29:6844863-6844566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 55
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr29:9911944-9912242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
137, 55
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr29:17222175-17222479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
58, 203
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr29:17668262-17668553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 123
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr29:20903521-20903224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
48, 124
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr29:21196884-21196583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
107, 95
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr29:28868399-28868709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 175
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr29:32799936-32799646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
114, 49
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr29:39567454-39567748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr29:40166009-40166310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
55, 157
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr29:45005852-45005563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
191, 53
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr29:87253-86944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
53, 7
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr29:1307097-1306793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr29:3237592-3237286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
7, 97
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr29:23844598-23844905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
53, 127
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr29:36183042-36183348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 83
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr29:465635-465331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
29, 142
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr29:11562381-11562682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
52, 96
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr29:6925786-6926075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
152, 55
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr29:26263618-26263907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr29:32290369-32290680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr29:26771207-26771510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
137, 49
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr29:12451138-12451447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
41, 275
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr29:22714961-22714650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
53, 247
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr29:40852699-40853001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
53, 131
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr29:9139175-9139502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 87
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr29:16309517-16309834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
166, 57
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr29:26673139-26672819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 71
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr29:8926692-8926341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
49, 127
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr29:36216884-36217236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr29:10156523-10156175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
146, 53
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr29:11915583-11915945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 253
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr29:13639600-13639237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
153, 57
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr29:12784188-12783837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 78
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr29:109476-109830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
299, 91
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr29:1556699-1557084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 191
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr29:21443577-21443176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr29:22162484-22162101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 57
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr29:26615958-26615578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr29:26778651-26779036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
53, 124
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr29:29769579-29769194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
153, 55
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr29:34297798-34297411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
144, 117
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr29:35291866-35292246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
135, 53
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr29:36530630-36531026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 146
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr29:34745888-34745493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 68
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr29:44236232-44236608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 119
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr29:38581735-38582139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr29:40117335-40117734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
53, 102
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr29:24952452-24952857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
57, 18
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr29:29056951-29057346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr29:31928746-31929156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr29:16609505-16609925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 34
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr29:4520102-4520508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr29:5892613-5893022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
50, 104
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr29:9709465-9709869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
153, 75
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr29:10058760-10058367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
196, 53
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr29:10838717-10839115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
153, 192
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr29:17109738-17110129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
153, 75
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr29:23874226-23874638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
103, 112
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr29:35501882-35501489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr29:39111541-39111148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
142, 46
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr29:40891935-40891531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
55, 215
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr29:43328405-43328808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr29:41530616-41531026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
92, 113
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr29:25737649-25737219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr29:19949076-19949506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
53, 119
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr29:28775688-28775264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr29:12679921-12680371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 196
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr29:26017744-26017287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr29:24624014-24624463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
55, 110
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr29:4120612-4121088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
117, 57
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr29:34744850-34744366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
2-192
               

               
Cow position:
               
chr29:43495827-43496010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr29:36586346-36586564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 87
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr29:26734801-26735036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
142, 71
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr29:18735875-18735583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr29:17607184-17607481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr29:7956216-7955921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
2-370
               

               
Cow position:
               
chr29:5098994-5098627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
2-376
               

               
Cow position:
               
chr29:1325208-1325589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
2-385
               

               
Cow position:
               
chr29:28195749-28195373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr29:40763917-40763527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
13, 9
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr29:23697746-23698146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
3-133
               

               
Cow position:
               
chr29:21665739-21665869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
60, 55
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr29:7408120-7407919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr29:17409098-17409399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 87
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr29:4625224-4624932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr29:29974810-29975105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr29:10235346-10235039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
135, 41
               

               
Conread position:
               
3-373
               

               
Cow position:
               
chr29:2744503-2744121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
151, 226
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr29:28197239-28196844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 83
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr29:35406025-35405614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
114, 163
               

               
Conread position:
               
3-435
               

               
Cow position:
               
chr29:27833756-27834202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 87
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:42268461-42268672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
4-244
               

               
Cow position:
               
chr29:39642946-39643188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr29:868542-868839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
45, 85
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr29:6286388-6286097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
111, 77
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr29:22936049-22936334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
136, 55
               

               
Conread position:
               
4-299
               

               
Cow position:
               
chr29:14501360-14501660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
49, 147
               

               
Conread position:
               
4-334
               

               
Cow position:
               
chr29:15940868-15940525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 119
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr29:585052-585270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 53
               

               
Conread position:
               
5-296
               

               
Cow position:
               
chr29:1229379-1229671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 146
               

               
Conread position:
               
5-385
               

               
Cow position:
               
chr29:10456782-10456420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
149, 76
               

               
Conread position:
               
5-399
               

               
Cow position:
               
chr29:22613202-22613597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
149, 32
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr29:8125823-8125591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
6-298
               

               
Cow position:
               
chr29:19428435-19428729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
119, 49
               

               
Conread position:
               
8-306
               

               
Cow position:
               
chr29:4480402-4480099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 167
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr29:20626351-20626630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
108, 49
               

               
Conread position:
               
13-139
               

               
Cow position:
               
chr29:23155029-23155159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
13-220
               

               
Cow position:
               
chr29:2415038-2414822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 91
               

               
Conread position:
               
13-243
               

               
Cow position:
               
chr29:2532840-2533070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 131
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr29:5109431-5109214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
14-296
               

               
Cow position:
               
chr29:35485024-35485310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 76
               

               
Conread position:
               
14-336
               

               
Cow position:
               
chr29:463874-463548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
49, 44
               

               
Conread position:
               
14-356
               

               
Cow position:
               
chr29:28166438-28166099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 194
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr29:5677565-5677805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
38, 180
               

               
Conread position:
               
15-296
               

               
Cow position:
               
chr29:40096737-40097026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 261
               

               
Conread position:
               
15-394
               

               
Cow position:
               
chr29:42364236-42363850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 168
               

               
Conread position:
               
17-266
               

               
Cow position:
               
chr29:28446477-28446215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 228
               

               
Conread position:
               
17-398
               

               
Cow position:
               
chr29:35677762-35677366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
17-399
               

               
Cow position:
               
chr29:19762055-19762439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 128
               

               
Conread position:
               
18-399
               

               
Cow position:
               
chr29:31489103-31489500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 187
               

               
Conread position:
               
18-480
               

               
Cow position:
               
chr29:16657469-16657950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
31, 313
               

               
Conread position:
               
21-298
               

               
Cow position:
               
chr29:44682304-44682038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
114, 29
               

               
Conread position:
               
21-399
               

               
Cow position:
               
chr29:732404-732786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
27-295
               

               
Cow position:
               
chr29:41364902-41365172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 31
               

               
Conread position:
               
27-350
               

               
Cow position:
               
chr29:22778389-22778060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
31, 251
               

               
Conread position:
               
29-296
               

               
Cow position:
               
chr29:22690014-22690289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 184
               

               
Conread position:
               
34-422
               

               
Cow position:
               
chr29:11433922-11434313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
35-237
               

               
Cow position:
               
chr29:10818636-10818429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 175
               

               
Conread position:
               
35-299
               

               
Cow position:
               
chr29:3100461-3100200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 180
               

               
Conread position:
               
37-267
               

               
Cow position:
               
chr29:26042431-26042663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
79, 171
               

               
Conread position:
               
38-453
               

               
Cow position:
               
chr29:26275417-26275833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
42-297
               

               
Cow position:
               
chr29:27588731-27588988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
46-299
               

               
Cow position:
               
chr29:25815021-25814770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
49-337
               

               
Cow position:
               
chr29:43099927-43099641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
89, 38
               

               
Conread position:
               
49-384
               

               
Cow position:
               
chr29:25091927-25092263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
92, 129
               

               
Conread position:
               
54-297
               

               
Cow position:
               
chr29:5186675-5186428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
78, 69
               

               
Conread position:
               
54-298
               

               
Cow position:
               
chr29:32211236-32211005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
109, 136
               

               
Conread position:
               
54-298
               

               
Cow position:
               
chr29:43009261-43009018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
54-385
               

               
Cow position:
               
chr29:9718949-9718615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
89, 199
               

               
Conread position:
               
54-399
               

               
Cow position:
               
chr29:41113037-41112714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
263, 17
               

               
Conread position:
               
56-294
               

               
Cow position:
               
chr29:23241961-23242208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
62-299
               

               
Cow position:
               
chr29:10018401-10018646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
62-399
               

               
Cow position:
               
chr29:27826353-27826681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
7, 133
               

               
Conread position:
               
63-297
               

               
Cow position:
               
chr29:23244051-23243813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
91, 164
               

               
Conread position:
               
68-299
               

               
Cow position:
               
chr29:31674464-31674700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
86, 100
               

               
Conread position:
               
79-357
               

               
Cow position:
               
chr29:29314810-29314524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
95-298
               

               
Cow position:
               
chr29:27329753-27329959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 78
               

               
Conread position:
               
97-305
               

               
Cow position:
               
chr29:4002759-4002965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 47
               

               
Conread position:
               
107-392
               

               
Cow position:
               
chr29:34359107-34358810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
47, 55
               

               
Conread position:
               
143-298
               

               
Cow position:
               
chr29:38978443-38978598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
152-385
               

               
Cow position:
               
chr29:30548695-30548936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
154-437
               

               
Cow position:
               
chr29:20167346-20167639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
157-352
               

               
Cow position:
               
chr29:40873936-40874137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
165-399
               

               
Cow position:
               
chr29:23825286-23825036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 162
               
Show alignments to all cow chromosomes.