Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rmgp001_g10.5
        

               Conread position:
               1-110
               

               Cow position:
               chr3:2335027-2335140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-112
               

               Cow position:
               chr3:54740127-54740015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 88
               

               Conread position:
               1-114
               

               Cow position:
               chr3:9638848-9638736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-114
               

               Cow position:
               chr3:18887324-18887443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-116
               

               Cow position:
               chr3:51012788-51012673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-130
               

               Cow position:
               chr3:48900757-48900627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               62, 31
               

               Conread position:
               1-133
               

               Cow position:
               chr3:55460756-55460619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr3:8901166-8901297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr3:52147935-52147799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               52, 130
               

               Conread position:
               1-134
               

               Cow position:
               chr3:75164165-75164034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               51, 66
               

               Conread position:
               1-150
               

               Cow position:
               chr3:33693394-33693544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               53, 110
               

               Conread position:
               1-150
               

               Cow position:
               chr3:56704792-56704650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-150
               

               Cow position:
               chr3:61262548-61262698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               62, 55
               

               Conread position:
               1-151
               

               Cow position:
               chr3:18607114-18607267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               53, 140
               

               Conread position:
               1-151
               

               Cow position:
               chr3:22716535-22716385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-151
               

               Cow position:
               chr3:34392352-34392202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               52, 89
               

               Conread position:
               1-152
               

               Cow position:
               chr3:18854838-18854991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               115, 58
               

               Conread position:
               1-152
               

               Cow position:
               chr3:24639332-24639489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr3:51609561-51609717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr3:65020079-65020232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 91
               

               Conread position:
               1-153
               

               Cow position:
               chr3:42483645-42483797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               122, 145
               

               Conread position:
               1-156
               

               Cow position:
               chr3:41947377-41947219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               46, 121
               

               Conread position:
               1-169
               

               Cow position:
               chr3:9116651-9116812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-169
               

               Cow position:
               chr3:23269847-23270015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               124, 53
               

               Conread position:
               1-169
               

               Cow position:
               chr3:61467350-61467524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-182
               

               Cow position:
               chr3:58383713-58383896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-189
               

               Cow position:
               chr3:83920943-83921134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               55, 148
               

               Conread position:
               1-190
               

               Cow position:
               chr3:66978588-66978774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               146, 117
               

               Conread position:
               1-193
               

               Cow position:
               chr3:13899708-13899505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-193
               

               Cow position:
               chr3:22872307-22872106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-194
               

               Cow position:
               chr3:13577441-13577247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               153, 117
               

               Conread position:
               1-194
               

               Cow position:
               chr3:53509941-53509743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               42, 151
               

               Conread position:
               1-195
               

               Cow position:
               chr3:34316219-34316015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-195
               

               Cow position:
               chr3:55117227-55117023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               52, 195
               

               Conread position:
               1-196
               

               Cow position:
               chr3:16547421-16547620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               52, 71
               

               Conread position:
               1-196
               

               Cow position:
               chr3:31419446-31419646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               126, 75
               

               Conread position:
               1-196
               

               Cow position:
               chr3:48566922-48566724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               52, 104
               

               Conread position:
               1-196
               

               Cow position:
               chr3:59208559-59208758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               62, 53
               

               Conread position:
               1-198
               

               Cow position:
               chr3:33633142-33632946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               119, 62
               

               Conread position:
               1-200
               

               Cow position:
               chr3:8753208-8753406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               46, 141
               

               Conread position:
               1-201
               

               Cow position:
               chr3:16157425-16157631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               52, 136
               

               Conread position:
               1-203
               

               Cow position:
               chr3:8604269-8604063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr3:25691494-25691705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               48, 97
               

               Conread position:
               1-203
               

               Cow position:
               chr3:58158722-58158520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               53, 165
               

               Conread position:
               1-211
               

               Cow position:
               chr3:1498615-1498825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 121
               

               Conread position:
               1-211
               

               Cow position:
               chr3:31298415-31298194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-212
               

               Cow position:
               chr3:22021228-22021015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 90
               

               Conread position:
               1-212
               

               Cow position:
               chr3:23944842-23945058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               55, 39
               

               Conread position:
               1-216
               

               Cow position:
               chr3:15057853-15057646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-217
               

               Cow position:
               chr3:21302685-21302476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr3:13118090-13118314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 121
               

               Conread position:
               1-226
               

               Cow position:
               chr3:61191172-61190952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               143, 61
               

               Conread position:
               1-233
               

               Cow position:
               chr3:16004241-16004007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               140, 68
               

               Conread position:
               1-233
               

               Cow position:
               chr3:35283353-35283110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               53, 216
               

               Conread position:
               1-236
               

               Cow position:
               chr3:4087421-4087177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-236
               

               Cow position:
               chr3:39171739-39171498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-237
               

               Cow position:
               chr3:61143838-61144082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               49, 186
               

               Conread position:
               1-237
               

               Cow position:
               chr3:67161676-67161927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               70, 219
               

               Conread position:
               1-239
               

               Cow position:
               chr3:12286980-12287218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               53, 41
               

               Conread position:
               1-239
               

               Cow position:
               chr3:17952401-17952643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-239
               

               Cow position:
               chr3:46161100-46160858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               115, 150
               

               Conread position:
               1-239
               

               Cow position:
               chr3:58540788-58540544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               53, 204
               

               Conread position:
               1-241
               

               Cow position:
               chr3:4031713-4031961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-242
               

               Cow position:
               chr3:9843328-9843575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               53, 212
               

               Conread position:
               1-242
               

               Cow position:
               chr3:20471615-20471376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               123, 70
               

               Conread position:
               1-242
               

               Cow position:
               chr3:49731893-49731651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-243
               

               Cow position:
               chr3:364474-364223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               57, 195
               

               Conread position:
               1-243
               

               Cow position:
               chr3:19789374-19789125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               1-243
               

               Cow position:
               chr3:48269608-48269854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               53, 138
               

               Conread position:
               1-243
               

               Cow position:
               chr3:49230755-49231006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               53, 216
               

               Conread position:
               1-243
               

               Cow position:
               chr3:60892377-60892612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               121, 129
               

               Conread position:
               1-243
               

               Cow position:
               chr3:78201012-78201257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               53, 191
               

               Conread position:
               1-244
               

               Cow position:
               chr3:5416486-5416230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 90
               

               Conread position:
               1-244
               

               Cow position:
               chr3:59451339-59451584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               117, 51
               

               Conread position:
               1-244
               

               Cow position:
               chr3:62883947-62884198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1-244
               

               Cow position:
               chr3:66375066-66375310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               62, 43
               

               Conread position:
               1-245
               

               Cow position:
               chr3:48578586-48578833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               153, 41
               

               Conread position:
               1-245
               

               Cow position:
               chr3:52650788-52650537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               1-246
               

               Cow position:
               chr3:51146921-51146674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               46, 146
               

               Conread position:
               1-246
               

               Cow position:
               chr3:54862677-54862420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               51, 67
               

               Conread position:
               1-248
               

               Cow position:
               chr3:3164751-3164501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               114, 192
               

               Conread position:
               1-248
               

               Cow position:
               chr3:43528492-43528242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-248
               

               Cow position:
               chr3:63861156-63860895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               59, 175
               

               Conread position:
               1-248
               

               Cow position:
               chr3:82657340-82657093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               130, 93
               

               Conread position:
               1-257
               

               Cow position:
               chr3:84000357-84000616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               62, 55
               

               Conread position:
               1-261
               

               Cow position:
               chr3:74621252-74620982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               52, 110
               

               Conread position:
               1-265
               

               Cow position:
               chr3:12255225-12255492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               115, 41
               

               Conread position:
               1-266
               

               Cow position:
               chr3:5851183-5850917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               59, 158
               

               Conread position:
               1-266
               

               Cow position:
               chr3:49218563-49218302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               94, 35
               

               Conread position:
               1-267
               

               Cow position:
               chr3:64172190-64172453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               51, 39
               

               Conread position:
               1-276
               

               Cow position:
               chr3:21341219-21340939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               54, 83
               

               Conread position:
               1-276
               

               Cow position:
               chr3:45524009-45524289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               115, 67
               

               Conread position:
               1-279
               

               Cow position:
               chr3:81277958-81277673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               52, 211
               

               Conread position:
               1-285
               

               Cow position:
               chr3:33698466-33698762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               53, 216
               

               Conread position:
               1-285
               

               Cow position:
               chr3:69849757-69849480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               153, 68
               

               Conread position:
               1-288
               

               Cow position:
               chr3:83816048-83815753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               211
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               52, 112
               

               Conread position:
               1-294
               

               Cow position:
               chr3:18497767-18498056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               120, 67
               

               Conread position:
               1-294
               

               Cow position:
               chr3:39066078-39066372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               51, 82
               

               Conread position:
               1-294
               

               Cow position:
               chr3:53588645-53588343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 214
               

               Conread position:
               1-295
               

               Cow position:
               chr3:23448386-23448096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               69, 57
               

               Conread position:
               1-295
               

               Cow position:
               chr3:27532917-27532613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 250
               

               Conread position:
               1-296
               

               Cow position:
               chr3:23471723-23471417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               55, 150
               

               Conread position:
               1-296
               

               Cow position:
               chr3:25690530-25690835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               52, 188
               

               Conread position:
               1-296
               

               Cow position:
               chr3:27289682-27289982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               76, 209
               

               Conread position:
               1-296
               

               Cow position:
               chr3:35852723-35852429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               1-296
               

               Cow position:
               chr3:46900939-46901240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               52, 223
               

               Conread position:
               1-296
               

               Cow position:
               chr3:48241366-48241656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-296
               

               Cow position:
               chr3:54903313-54903606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 205
               

               Conread position:
               1-296
               

               Cow position:
               chr3:68583258-68582957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               116, 207
               

               Conread position:
               1-296
               

               Cow position:
               chr3:74088429-74088138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               52, 202
               

               Conread position:
               1-296
               

               Cow position:
               chr3:78076934-78077227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 192
               

               Conread position:
               1-296
               

               Cow position:
               chr3:79902248-79902538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               115, 212
               

               Conread position:
               1-297
               

               Cow position:
               chr3:22820314-22820614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               153, 57
               

               Conread position:
               1-297
               

               Cow position:
               chr3:37186578-37186870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-297
               

               Cow position:
               chr3:71430467-71430161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-297
               

               Cow position:
               chr3:81371401-81371692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               151, 53
               

               Conread position:
               1-298
               

               Cow position:
               chr3:56626-56333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 84
               

               Conread position:
               1-298
               

               Cow position:
               chr3:14633242-14632939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               60, 116
               

               Conread position:
               1-298
               

               Cow position:
               chr3:17895599-17895893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               251, 51
               

               Conread position:
               1-298
               

               Cow position:
               chr3:38346946-38347234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               53, 88
               

               Conread position:
               1-298
               

               Cow position:
               chr3:50069524-50069807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               123, 57
               

               Conread position:
               1-298
               

               Cow position:
               chr3:55085439-55085125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-298
               

               Cow position:
               chr3:58969151-58968859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               110, 57
               

               Conread position:
               1-298
               

               Cow position:
               chr3:59101582-59101871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               121, 11
               

               Conread position:
               1-298
               

               Cow position:
               chr3:62826878-62826575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               53, 212
               

               Conread position:
               1-298
               

               Cow position:
               chr3:66292434-66292132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-298
               

               Cow position:
               chr3:67744883-67744584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               41, 198
               

               Conread position:
               1-298
               

               Cow position:
               chr3:69750955-69750667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               153, 57
               

               Conread position:
               1-298
               

               Cow position:
               chr3:70899645-70899935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               51, 79
               

               Conread position:
               1-298
               

               Cow position:
               chr3:71497400-71497094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               52, 94
               

               Conread position:
               1-298
               

               Cow position:
               chr3:73460723-73461010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               53, 100
               

               Conread position:
               1-298
               

               Cow position:
               chr3:73759772-73759473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               53, 24
               

               Conread position:
               1-298
               

               Cow position:
               chr3:75711063-75711350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               144, 47
               

               Conread position:
               1-298
               

               Cow position:
               chr3:80071861-80072173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-299
               

               Cow position:
               chr3:1830818-1830531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               186, 30
               

               Conread position:
               1-299
               

               Cow position:
               chr3:2216104-2216413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-299
               

               Cow position:
               chr3:4457331-4457026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 141
               

               Conread position:
               1-299
               

               Cow position:
               chr3:10347100-10347396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               140, 203
               

               Conread position:
               1-299
               

               Cow position:
               chr3:14263137-14263438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               115, 234
               

               Conread position:
               1-299
               

               Cow position:
               chr3:17695260-17694960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               52, 90
               

               Conread position:
               1-299
               

               Cow position:
               chr3:20129687-20129980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               115, 193
               

               Conread position:
               1-299
               

               Cow position:
               chr3:29596139-29596435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-299
               

               Cow position:
               chr3:30009165-30008863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               115, 135
               

               Conread position:
               1-299
               

               Cow position:
               chr3:37599671-37599383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               150, 99
               

               Conread position:
               1-299
               

               Cow position:
               chr3:49382697-49382994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               118, 86
               

               Conread position:
               1-299
               

               Cow position:
               chr3:49650124-49650433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-299
               

               Cow position:
               chr3:51604862-51604570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 212
               

               Conread position:
               1-299
               

               Cow position:
               chr3:53112914-53113220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               53, 194
               

               Conread position:
               1-299
               

               Cow position:
               chr3:53384538-53384235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               124, 55
               

               Conread position:
               1-299
               

               Cow position:
               chr3:60933160-60933462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               47, 79
               

               Conread position:
               1-299
               

               Cow position:
               chr3:61539541-61539846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               52, 285
               

               Conread position:
               1-299
               

               Cow position:
               chr3:72675832-72676136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               52, 197
               

               Conread position:
               1-299
               

               Cow position:
               chr3:79592144-79591846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               54, 197
               

               Conread position:
               1-300
               

               Cow position:
               chr3:14626407-14626104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               115, 58
               

               Conread position:
               1-300
               

               Cow position:
               chr3:17957212-17957513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               120, 21
               

               Conread position:
               1-300
               

               Cow position:
               chr3:26219316-26219005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 6
               

               Conread position:
               1-300
               

               Cow position:
               chr3:53573005-53572706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               115, 76
               

               Conread position:
               1-301
               

               Cow position:
               chr3:13353102-13353408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 276
               

               Conread position:
               1-302
               

               Cow position:
               chr3:42177903-42178201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               51, 128
               

               Conread position:
               1-303
               

               Cow position:
               chr3:5101015-5100723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               153, 12
               

               Conread position:
               1-303
               

               Cow position:
               chr3:33327449-33327758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               46, 71
               

               Conread position:
               1-303
               

               Cow position:
               chr3:53592955-53592639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               53, 10
               

               Conread position:
               1-303
               

               Cow position:
               chr3:72776985-72777288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               55, 197
               

               Conread position:
               1-305
               

               Cow position:
               chr3:19708355-19708056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               115, 10
               

               Conread position:
               1-305
               

               Cow position:
               chr3:23092238-23091925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               45, 230
               

               Conread position:
               1-305
               

               Cow position:
               chr3:38691661-38691355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               64, 57
               

               Conread position:
               1-311
               

               Cow position:
               chr3:65800337-65800642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               22, 81
               

               Conread position:
               1-313
               

               Cow position:
               chr3:5096949-5097266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-313
               

               Cow position:
               chr3:72018864-72019175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               115, 52
               

               Conread position:
               1-314
               

               Cow position:
               chr3:20437901-20437593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               143, 68
               

               Conread position:
               1-334
               

               Cow position:
               chr3:61840034-61840355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               135, 58
               

               Conread position:
               1-335
               

               Cow position:
               chr3:77365549-77365209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               40, 76
               

               Conread position:
               1-336
               

               Cow position:
               chr3:26553967-26553630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               70, 49
               

               Conread position:
               1-336
               

               Cow position:
               chr3:54782265-54781922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               153, 22
               

               Conread position:
               1-339
               

               Cow position:
               chr3:17222399-17222055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               1-339
               

               Cow position:
               chr3:65413531-65413191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               44, 71
               

               Conread position:
               1-339
               

               Cow position:
               chr3:79292579-79292913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-346
               

               Cow position:
               chr3:55272298-55271946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-350
               

               Cow position:
               chr3:56059552-56059914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 57
               

               Conread position:
               1-356
               

               Cow position:
               chr3:73443342-73442987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-357
               

               Cow position:
               chr3:12712178-12711805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               256
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               52, 208
               

               Conread position:
               1-357
               

               Cow position:
               chr3:17935178-17934831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               320, 65
               

               Conread position:
               1-357
               

               Cow position:
               chr3:81471356-81470990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-358
               

               Cow position:
               chr3:59798999-59799351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               249
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               153, 49
               

               Conread position:
               1-367
               

               Cow position:
               chr3:73394861-73395236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               53, 203
               

               Conread position:
               1-367
               

               Cow position:
               chr3:75080511-75080876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 208
               

               Conread position:
               1-367
               

               Cow position:
               chr3:82460929-82461295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               252
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               51, 63
               

               Conread position:
               1-374
               

               Cow position:
               chr3:15229074-15228707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               115, 55
               

               Conread position:
               1-376
               

               Cow position:
               chr3:73708794-73709175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               1-376
               

               Cow position:
               chr3:76172917-76172554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               53, 31
               

               Conread position:
               1-383
               

               Cow position:
               chr3:7338029-7337649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 143
               

               Conread position:
               1-383
               

               Cow position:
               chr3:29812988-29813361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               52, 91
               

               Conread position:
               1-383
               

               Cow position:
               chr3:53429145-53428783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               319, 59
               

               Conread position:
               1-383
               

               Cow position:
               chr3:68627930-68627552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               272
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-385
               

               Cow position:
               chr3:3032140-3032546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               62, 38
               

               Conread position:
               1-385
               

               Cow position:
               chr3:4461744-4461352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-385
               

               Cow position:
               chr3:14552623-14553009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               263
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-385
               

               Cow position:
               chr3:14601969-14601566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               51, 205
               

               Conread position:
               1-385
               

               Cow position:
               chr3:16752508-16752117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               265
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-385
               

               Cow position:
               chr3:31309610-31309214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               114, 188
               

               Conread position:
               1-385
               

               Cow position:
               chr3:51234351-51233967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               259
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-385
               

               Cow position:
               chr3:54050274-54049892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               53, 78
               

               Conread position:
               1-385
               

               Cow position:
               chr3:55124533-55124144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               263
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               115, 128
               

               Conread position:
               1-385
               

               Cow position:
               chr3:61224990-61224612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               57, 98
               

               Conread position:
               1-385
               

               Cow position:
               chr3:82020099-82019705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-386
               

               Cow position:
               chr3:6873500-6873125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               263
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               53, 180
               

               Conread position:
               1-390
               

               Cow position:
               chr3:26065746-26066128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 91
               

               Conread position:
               1-393
               

               Cow position:
               chr3:32584903-32585290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               153, 65
               

               Conread position:
               1-394
               

               Cow position:
               chr3:26970570-26970959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               275
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               60, 194
               

               Conread position:
               1-394
               

               Cow position:
               chr3:30463421-30463030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               269
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               153, 127
               

               Conread position:
               1-394
               

               Cow position:
               chr3:52607928-52608327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 157
               

               Conread position:
               1-394
               

               Cow position:
               chr3:53150072-53150479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               281
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               59, 104
               

               Conread position:
               1-394
               

               Cow position:
               chr3:53270571-53270979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-394
               

               Cow position:
               chr3:54945870-54946270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 10
               

               Conread position:
               1-394
               

               Cow position:
               chr3:56476427-56476820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               153, 66
               

               Conread position:
               1-394
               

               Cow position:
               chr3:59604615-59604988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               299, 61
               

               Conread position:
               1-394
               

               Cow position:
               chr3:66900997-66900580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               277
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               1-394
               

               Cow position:
               chr3:72390825-72391234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               52, 90
               

               Conread position:
               1-394
               

               Cow position:
               chr3:74533093-74533480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 134
               

               Conread position:
               1-395
               

               Cow position:
               chr3:77271522-77271131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               261
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-396
               

               Cow position:
               chr3:44101727-44102115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               268
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               123, 47
               

               Conread position:
               1-396
               

               Cow position:
               chr3:53909857-53910257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               25, 165
               

               Conread position:
               1-397
               

               Cow position:
               chr3:67704285-67704689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               269
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               52, 83
               

               Conread position:
               1-398
               

               Cow position:
               chr3:71237902-71238302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               270
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               1-398
               

               Cow position:
               chr3:83474492-83474904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               135, 87
               

               Conread position:
               1-399
               

               Cow position:
               chr3:72160-72573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               137, 55
               

               Conread position:
               1-399
               

               Cow position:
               chr3:5374078-5374462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               271
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               53, 95
               

               Conread position:
               1-399
               

               Cow position:
               chr3:7566674-7566268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               115, 87
               

               Conread position:
               1-399
               

               Cow position:
               chr3:7763409-7763811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 82
               

               Conread position:
               1-399
               

               Cow position:
               chr3:10958484-10958091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-399
               

               Cow position:
               chr3:16333551-16333957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               115, 87
               

               Conread position:
               1-399
               

               Cow position:
               chr3:17937094-17936694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 154
               

               Conread position:
               1-399
               

               Cow position:
               chr3:23408598-23408211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               153, 50
               

               Conread position:
               1-399
               

               Cow position:
               chr3:26903860-26904252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               124, 162
               

               Conread position:
               1-399
               

               Cow position:
               chr3:48362828-48363222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 31
               

               Conread position:
               1-399
               

               Cow position:
               chr3:51578576-51578171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 71
               

               Conread position:
               1-399
               

               Cow position:
               chr3:53046912-53046505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               112, 86
               

               Conread position:
               1-399
               

               Cow position:
               chr3:54434718-54435121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 80
               

               Conread position:
               1-399
               

               Cow position:
               chr3:55190006-55189597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 52
               

               Conread position:
               1-399
               

               Cow position:
               chr3:59001001-59000610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-399
               

               Cow position:
               chr3:71231151-71231551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               112, 47
               

               Conread position:
               1-399
               

               Cow position:
               chr3:73467364-73467779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               275
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               53, 43
               

               Conread position:
               1-399
               

               Cow position:
               chr3:75158110-75158508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               154, 60
               

               Conread position:
               1-400
               

               Cow position:
               chr3:45647421-45647820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 294
               

               Conread position:
               1-400
               

               Cow position:
               chr3:60597293-60597691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               124, 51
               

               Conread position:
               1-401
               

               Cow position:
               chr3:80564705-80565118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 230
               

               Conread position:
               1-418
               

               Cow position:
               chr3:23876743-23877174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               115, 58
               

               Conread position:
               1-422
               

               Cow position:
               chr3:50614384-50614800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               137, 66
               

               Conread position:
               1-424
               

               Cow position:
               chr3:8393091-8393518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               284
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               53, 176
               

               Conread position:
               1-426
               

               Cow position:
               chr3:39970127-39969682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 434
               

               Conread position:
               1-426
               

               Cow position:
               chr3:59392365-59391949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               51, 141
               

               Conread position:
               1-427
               

               Cow position:
               chr3:66885293-66884850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               291
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               53, 146
               

               Conread position:
               1-431
               

               Cow position:
               chr3:2506736-2506289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               305
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               53, 203
               

               Conread position:
               1-433
               

               Cow position:
               chr3:23169325-23168876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 246
               

               Conread position:
               1-433
               

               Cow position:
               chr3:26682049-26681636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               53, 94
               

               Conread position:
               1-434
               

               Cow position:
               chr3:70895791-70896221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 192
               

               Conread position:
               1-435
               

               Cow position:
               chr3:29887679-29887251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 296
               

               Conread position:
               1-435
               

               Cow position:
               chr3:68647905-68648365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               296
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 184
               

               Conread position:
               1-435
               

               Cow position:
               chr3:68708259-68707834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               299
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               57, 28
               

               Conread position:
               1-436
               

               Cow position:
               chr3:65058446-65058883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               292
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               48, 36
               

               Conread position:
               1-436
               

               Cow position:
               chr3:65968899-65969362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               53, 443
               

               Conread position:
               1-437
               

               Cow position:
               chr3:57577439-57577886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               52, 101
               

               Conread position:
               1-438
               

               Cow position:
               chr3:18686661-18687087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               286
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               153, 53
               

               Conread position:
               1-438
               

               Cow position:
               chr3:57763968-57764407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               294
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               53, 196
               

               Conread position:
               1-439
               

               Cow position:
               chr3:9641309-9641751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               1-439
               

               Cow position:
               chr3:15158786-15159226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               285
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               140, 199
               

               Conread position:
               1-451
               

               Cow position:
               chr3:30179828-30180290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               308
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               1-454
               

               Cow position:
               chr3:62999260-62998794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               306
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               42, 151
               

               Conread position:
               1-455
               

               Cow position:
               chr3:55970249-55970721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               318
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               53, 88
               

               Conread position:
               1-459
               

               Cow position:
               chr3:3985075-3985521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               300
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               62, 53
               

               Conread position:
               1-459
               

               Cow position:
               chr3:53739445-53738971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               57, 211
               

               Conread position:
               1-460
               

               Cow position:
               chr3:57754739-57754265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               306
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               53, 183
               

               Conread position:
               1-464
               

               Cow position:
               chr3:2393221-2392749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               317
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 88
               

               Conread position:
               2-120
               

               Cow position:
               chr3:59179151-59179273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               2-150
               

               Cow position:
               chr3:48923767-48923617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 75
               

               Conread position:
               2-152
               

               Cow position:
               chr3:7678417-7678564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               114, 56
               

               Conread position:
               2-190
               

               Cow position:
               chr3:42588095-42588295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               51, 88
               

               Conread position:
               2-191
               

               Cow position:
               chr3:58951367-58951554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               2-204
               

               Cow position:
               chr3:45307680-45307888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               52, 120
               

               Conread position:
               2-210
               

               Cow position:
               chr3:79208257-79208039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               2-240
               

               Cow position:
               chr3:41328201-41328429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               134, 52
               

               Conread position:
               2-241
               

               Cow position:
               chr3:77496563-77496816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-243
               

               Cow position:
               chr3:54959936-54960179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               122, 83
               

               Conread position:
               2-243
               

               Cow position:
               chr3:73590252-73590005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               2-243
               

               Cow position:
               chr3:77227064-77227314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-244
               

               Cow position:
               chr3:29807208-29807457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               52, 92
               

               Conread position:
               2-246
               

               Cow position:
               chr3:74611308-74611560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               28, 82
               

               Conread position:
               2-286
               

               Cow position:
               chr3:13512991-13512718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               2-294
               

               Cow position:
               chr3:36100574-36100878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 265
               

               Conread position:
               2-298
               

               Cow position:
               chr3:66610092-66609800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               152, 52
               

               Conread position:
               2-299
               

               Cow position:
               chr3:15954331-15954040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               122, 85
               

               Conread position:
               2-299
               

               Cow position:
               chr3:61857242-61857551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               51, 275
               

               Conread position:
               2-303
               

               Cow position:
               chr3:28908449-28908154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               134, 67
               

               Conread position:
               2-396
               

               Cow position:
               chr3:83455406-83455005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               56, 119
               

               Conread position:
               2-399
               

               Cow position:
               chr3:18393638-18393249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               168, 67
               

               Conread position:
               2-399
               

               Cow position:
               chr3:64281190-64280785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               269
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               52, 201
               

               Conread position:
               2-399
               

               Cow position:
               chr3:65236771-65237176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               114, 52
               

               Conread position:
               2-459
               

               Cow position:
               chr3:18066880-18067348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               301
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               70, 252
               

               Conread position:
               3-117
               

               Cow position:
               chr3:83988228-83988341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               76, 58
               

               Conread position:
               3-120
               

               Cow position:
               chr3:53903933-53904050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-134
               

               Cow position:
               chr3:22908087-22907953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               50, 89
               

               Conread position:
               3-134
               

               Cow position:
               chr3:48370878-48371013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               3-152
               

               Cow position:
               chr3:11019865-11020017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               3-152
               

               Cow position:
               chr3:11640181-11640329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               112, 85
               

               Conread position:
               3-196
               

               Cow position:
               chr3:5045063-5044859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               3-196
               

               Cow position:
               chr3:15080992-15080802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               3-209
               

               Cow position:
               chr3:8457403-8457612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               44, 15
               

               Conread position:
               3-239
               

               Cow position:
               chr3:47284584-47284821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               60, 53
               

               Conread position:
               3-243
               

               Cow position:
               chr3:81939998-81940247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               53, 207
               

               Conread position:
               3-244
               

               Cow position:
               chr3:4332110-4332355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               50, 175
               

               Conread position:
               3-244
               

               Cow position:
               chr3:17451187-17450949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               55, 132
               

               Conread position:
               3-244
               

               Cow position:
               chr3:49787153-49787404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 178
               

               Conread position:
               3-244
               

               Cow position:
               chr3:57554099-57553858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               52, 82
               

               Conread position:
               3-248
               

               Cow position:
               chr3:41367237-41366986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               60, 55
               

               Conread position:
               3-296
               

               Cow position:
               chr3:525101-525388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               60, 55
               

               Conread position:
               3-296
               

               Cow position:
               chr3:22089535-22089235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 199
               

               Conread position:
               3-296
               

               Cow position:
               chr3:56582590-56582890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               189, 113
               

               Conread position:
               3-298
               

               Cow position:
               chr3:19006414-19006701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               227, 64
               

               Conread position:
               3-299
               

               Cow position:
               chr3:14465957-14465661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               33, 54
               

               Conread position:
               3-299
               

               Cow position:
               chr3:79220597-79220903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               3-305
               

               Cow position:
               chr3:70401649-70401947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               60, 55
               

               Conread position:
               3-334
               

               Cow position:
               chr3:18459773-18459451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               123, 85
               

               Conread position:
               3-335
               

               Cow position:
               chr3:57624214-57624545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               60, 55
               

               Conread position:
               3-339
               

               Cow position:
               chr3:49793159-49793483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               60, 10
               

               Conread position:
               3-352
               

               Cow position:
               chr3:2680258-2680618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               50, 208
               

               Conread position:
               3-357
               

               Cow position:
               chr3:80581418-80581759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 55
               

               Conread position:
               3-359
               

               Cow position:
               chr3:80053787-80053438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               113, 53
               

               Conread position:
               3-376
               

               Cow position:
               chr3:28898476-28898091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               114, 207
               

               Conread position:
               3-383
               

               Cow position:
               chr3:70565991-70565599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 55
               

               Conread position:
               3-384
               

               Cow position:
               chr3:11987077-11987464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               114, 84
               

               Conread position:
               3-385
               

               Cow position:
               chr3:210070-210459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               60, 55
               

               Conread position:
               3-385
               

               Cow position:
               chr3:37041174-37041558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               60, 53
               

               Conread position:
               3-385
               

               Cow position:
               chr3:50768425-50768816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 194
               

               Conread position:
               3-394
               

               Cow position:
               chr3:69417041-69416632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               3-394
               

               Cow position:
               chr3:75050871-75050475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               128, 84
               

               Conread position:
               3-399
               

               Cow position:
               chr3:72473654-72474075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               51, 355
               

               Conread position:
               3-399
               

               Cow position:
               chr3:80973100-80973504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               51, 135
               

               Conread position:
               3-433
               

               Cow position:
               chr3:15387958-15388406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               47, 180
               

               Conread position:
               3-433
               

               Cow position:
               chr3:70675967-70676419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               290
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 94
               

               Conread position:
               3-436
               

               Cow position:
               chr3:78443816-78443381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               281
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               50, 192
               

               Conread position:
               3-455
               

               Cow position:
               chr3:2397036-2396591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 172
               

               Conread position:
               4-211
               

               Cow position:
               chr3:31501095-31501309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               50, 162
               

               Conread position:
               4-244
               

               Cow position:
               chr3:25754784-25755014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 94
               

               Conread position:
               4-246
               

               Cow position:
               chr3:74409239-74409477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               148, 54
               

               Conread position:
               4-286
               

               Cow position:
               chr3:23417120-23416856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               280, 139
               

               Conread position:
               4-298
               

               Cow position:
               chr3:45534552-45534252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               52, 267
               

               Conread position:
               4-385
               

               Cow position:
               chr3:74233943-74234322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 140
               

               Conread position:
               4-399
               

               Cow position:
               chr3:80740320-80740706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               150, 63
               

               Conread position:
               4-429
               

               Cow position:
               chr3:2674777-2675217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 54
               

               Conread position:
               4-432
               

               Cow position:
               chr3:8060880-8061308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               286
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               150, 49
               

               Conread position:
               4-433
               

               Cow position:
               chr3:77188190-77188625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               281
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               113, 75
               

               Conread position:
               4-508
               

               Cow position:
               chr3:17456521-17456002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               524
               

               Alignm identity:
               332
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               52, 190
               

               Conread position:
               5-298
               

               Cow position:
               chr3:59473861-59474166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               49, 128
               

               Conread position:
               5-335
               

               Cow position:
               chr3:11711702-11712046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               49, 29
               

               Conread position:
               5-433
               

               Cow position:
               chr3:63315879-63316315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               10, 185
               

               Conread position:
               5-435
               

               Cow position:
               chr3:68881363-68880943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               301
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               31, 52
               

               Conread position:
               5-455
               

               Cow position:
               chr3:52652325-52651881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               292
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               272, 74
               

               Conread position:
               6-245
               

               Cow position:
               chr3:15752878-15752640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               188, 52
               

               Conread position:
               6-298
               

               Cow position:
               chr3:48296459-48296742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               148, 193
               

               Conread position:
               6-299
               

               Cow position:
               chr3:49461187-49460881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               6-395
               

               Cow position:
               chr3:70334952-70334545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 25
               

               Conread position:
               6-399
               

               Cow position:
               chr3:45881659-45882052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               57, 52
               

               Conread position:
               7-294
               

               Cow position:
               chr3:15685167-15684881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               16, 71
               

               Conread position:
               7-298
               

               Cow position:
               chr3:74878838-74878545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               109, 23
               

               Conread position:
               8-207
               

               Cow position:
               chr3:26894413-26894617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 50
               

               Conread position:
               8-235
               

               Cow position:
               chr3:78946084-78945850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 23
               

               Conread position:
               8-246
               

               Cow position:
               chr3:55992120-55991872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 98
               

               Conread position:
               8-280
               

               Cow position:
               chr3:55947327-55947610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               8-291
               

               Cow position:
               chr3:63332562-63332855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 221
               

               Conread position:
               8-297
               

               Cow position:
               chr3:46350411-46350714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               46, 255
               

               Conread position:
               8-383
               

               Cow position:
               chr3:43233255-43233638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               46, 181
               

               Conread position:
               8-385
               

               Cow position:
               chr3:44932260-44932649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 298
               

               Conread position:
               8-399
               

               Cow position:
               chr3:15052193-15051799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               146, 53
               

               Conread position:
               8-399
               

               Cow position:
               chr3:59610972-59610566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 86
               

               Conread position:
               8-401
               

               Cow position:
               chr3:78092754-78092356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 17
               

               Conread position:
               9-298
               

               Cow position:
               chr3:8393692-8393986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 46
               

               Conread position:
               9-356
               

               Cow position:
               chr3:3738237-3738582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               44, 126
               

               Conread position:
               10-248
               

               Cow position:
               chr3:59271305-59271537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               128, 57
               

               Conread position:
               10-298
               

               Cow position:
               chr3:23445136-23444844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               117, 59
               

               Conread position:
               10-305
               

               Cow position:
               chr3:115961-116240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               111, 20
               

               Conread position:
               10-305
               

               Cow position:
               chr3:62789446-62789124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               10-389
               

               Cow position:
               chr3:6689748-6690144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               44, 203
               

               Conread position:
               13-152
               

               Cow position:
               chr3:35074438-35074579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               13-298
               

               Cow position:
               chr3:73764439-73764156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               112, 197
               

               Conread position:
               13-385
               

               Cow position:
               chr3:7331360-7330996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               269
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               41, 182
               

               Conread position:
               13-394
               

               Cow position:
               chr3:53221771-53222158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 159
               

               Conread position:
               14-357
               

               Cow position:
               chr3:55836071-55835718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               247
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               40, 314
               

               Conread position:
               14-399
               

               Cow position:
               chr3:12705801-12705394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               269
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               40, 318
               

               Conread position:
               15-242
               

               Cow position:
               chr3:5420107-5419871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               32, 157
               

               Conread position:
               16-244
               

               Cow position:
               chr3:83201768-83201535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               38, 190
               

               Conread position:
               16-299
               

               Cow position:
               chr3:39661690-39661412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               100, 60
               

               Conread position:
               16-399
               

               Cow position:
               chr3:53790781-53790389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               265
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               38, 213
               

               Conread position:
               17-296
               

               Cow position:
               chr3:50762885-50763163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 84
               

               Conread position:
               17-298
               

               Cow position:
               chr3:22232882-22232610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               137, 36
               

               Conread position:
               18-169
               

               Cow position:
               chr3:4861451-4861604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 40
               

               Conread position:
               19-357
               

               Cow position:
               chr3:13507226-13507574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               35, 77
               

               Conread position:
               20-367
               

               Cow position:
               chr3:49327701-49328062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               21-305
               

               Cow position:
               chr3:31047184-31046901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               133, 17
               

               Conread position:
               21-357
               

               Cow position:
               chr3:17447843-17447511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               147, 80
               

               Conread position:
               25-261
               

               Cow position:
               chr3:55106674-55106432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               29, 169
               

               Conread position:
               25-433
               

               Cow position:
               chr3:27274302-27274713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               110, 42
               

               Conread position:
               27-298
               

               Cow position:
               chr3:59621865-59621604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               28-385
               

               Cow position:
               chr3:68146064-68145714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               238
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               88, 40
               

               Conread position:
               29-298
               

               Cow position:
               chr3:15506220-15506492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 138
               

               Conread position:
               30-296
               

               Cow position:
               chr3:26960821-26960546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               30-399
               

               Cow position:
               chr3:38863891-38864271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               33, 28
               

               Conread position:
               31-248
               

               Cow position:
               chr3:21051063-21050843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               85, 24
               

               Conread position:
               31-296
               

               Cow position:
               chr3:56301573-56301316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 148
               

               Conread position:
               31-357
               

               Cow position:
               chr3:74134480-74134810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               32, 27
               

               Conread position:
               32-385
               

               Cow position:
               chr3:74754105-74754452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               159, 26
               

               Conread position:
               34-267
               

               Cow position:
               chr3:2198660-2198896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               29, 21
               

               Conread position:
               35-388
               

               Cow position:
               chr3:11063157-11063507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               19, 132
               

               Conread position:
               36-244
               

               Cow position:
               chr3:15859891-15859676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               39-432
               

               Cow position:
               chr3:23105583-23105178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               51-291
               

               Cow position:
               chr3:72663260-72663506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               73, 160
               

               Conread position:
               54-293
               

               Cow position:
               chr3:53095138-53094892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 140
               

               Conread position:
               54-296
               

               Cow position:
               chr3:27697181-27696936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               62, 139
               

               Conread position:
               54-298
               

               Cow position:
               chr3:4319512-4319755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               71, 90
               

               Conread position:
               54-300
               

               Cow position:
               chr3:25944879-25945139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               54-383
               

               Cow position:
               chr3:70609424-70609760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 213
               

               Conread position:
               54-385
               

               Cow position:
               chr3:36375746-36375401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               70, 200
               

               Conread position:
               54-390
               

               Cow position:
               chr3:45211097-45211446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               61, 21
               

               Conread position:
               56-152
               

               Cow position:
               chr3:5082838-5082742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               57-284
               

               Cow position:
               chr3:70631819-70632051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               97, 66
               

               Conread position:
               61-399
               

               Cow position:
               chr3:74079834-74079485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               93, 222
               

               Conread position:
               61-433
               

               Cow position:
               chr3:55319098-55318710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               62-399
               

               Cow position:
               chr3:57273872-57274211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               90, 69
               

               Conread position:
               65-299
               

               Cow position:
               chr3:83798030-83797789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               59, 131
               

               Conread position:
               66-399
               

               Cow position:
               chr3:68156551-68156880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               77, 27
               

               Conread position:
               71-298
               

               Cow position:
               chr3:20678020-20677798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               78, 72
               

               Conread position:
               71-299
               

               Cow position:
               chr3:1453307-1453081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               50, 137
               

               Conread position:
               72-399
               

               Cow position:
               chr3:54506525-54506859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               129, 71
               

               Conread position:
               77-394
               

               Cow position:
               chr3:70762302-70761977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               66, 112
               

               Conread position:
               77-399
               

               Cow position:
               chr3:76922842-76922520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               77, 155
               

               Conread position:
               79-394
               

               Cow position:
               chr3:15153513-15153834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               7, 12
               

               Conread position:
               81-298
               

               Cow position:
               chr3:26874415-26874634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               81-299
               

               Cow position:
               chr3:59034861-59035085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               81-383
               

               Cow position:
               chr3:19585687-19585999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               81-399
               

               Cow position:
               chr3:55819572-55819902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               43, 273
               

               Conread position:
               88-296
               

               Cow position:
               chr3:32787292-32787502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 102
               

               Conread position:
               90-399
               

               Cow position:
               chr3:68616491-68616182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               53, 154
               

               Conread position:
               95-303
               

               Cow position:
               chr3:53508460-53508660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               104-436
               

               Cow position:
               chr3:55177905-55177562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 223
               

               Conread position:
               106-384
               

               Cow position:
               chr3:79196609-79196899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 63
               

               Conread position:
               145-384
               

               Cow position:
               chr3:32409104-32409356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               171, 9
               

               Conread position:
               145-389
               

               Cow position:
               chr3:71474517-71474266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               15, 206
               

               Conread position:
               145-390
               

               Cow position:
               chr3:15951019-15950776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               192, 56
               

               Conread position:
               146-385
               

               Cow position:
               chr3:60264824-60264584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               58, 47
               

               Conread position:
               154-381
               

               Cow position:
               chr3:19626608-19626374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               43, 181
               

               Conread position:
               165-394
               

               Cow position:
               chr3:31350193-31349962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               165-399
               

               Cow position:
               chr3:75608409-75608641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 97
               

               Conread position:
               171-394
               

               Cow position:
               chr3:10668961-10668733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               171-399
               

               Cow position:
               chr3:59299494-59299726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               115, 39
               
Show alignments to all cow chromosomes.
Conread position:	1-110
Cow position:	chr3:2335027-2335140 (view UCSC Genome Browser custom track)
Alignm length:	114
Alignm identity:	94
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	53, 0
Conread position:	1-112
Cow position:	chr3:54740127-54740015 (view UCSC Genome Browser custom track)
Alignm length:	116
Alignm identity:	96
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	52, 88
Conread position:	1-114
Cow position:	chr3:9638848-9638736 (view UCSC Genome Browser custom track)
Alignm length:	114
Alignm identity:	93
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	57, 0
Conread position:	1-116
Cow position:	chr3:51012788-51012673 (view UCSC Genome Browser custom track)
Alignm length:	116
Alignm identity:	90
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	1-130
Cow position:	chr3:48900757-48900627 (view UCSC Genome Browser custom track)
Alignm length:	132
Alignm identity:	101
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	62, 31
Conread position:	1-133
Cow position:	chr3:55460756-55460619 (view UCSC Genome Browser custom track)
Alignm length:	138
Alignm identity:	105
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	46, 0
Conread position:	1-134
Cow position:	chr3:8901166-8901297 (view UCSC Genome Browser custom track)
Alignm length:	134
Alignm identity:	108
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	21, 0
Conread position:	1-150
Cow position:	chr3:33693394-33693544 (view UCSC Genome Browser custom track)
Alignm length:	154
Alignm identity:	116
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	53, 110
Conread position:	1-151
Cow position:	chr3:18607114-18607267 (view UCSC Genome Browser custom track)
Alignm length:	155
Alignm identity:	124
Alignm E-value:	4e-31
Alignm gaps (pig, cow):	53, 140
Conread position:	1-152
Cow position:	chr3:18854838-18854991 (view UCSC Genome Browser custom track)
Alignm length:	155
Alignm identity:	117
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	115, 58
Conread position:	1-153
Cow position:	chr3:42483645-42483797 (view UCSC Genome Browser custom track)
Alignm length:	154
Alignm identity:	120
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	122, 145
Conread position:	1-156
Cow position:	chr3:41947377-41947219 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	118
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	46, 121
Conread position:	1-169
Cow position:	chr3:9116651-9116812 (view UCSC Genome Browser custom track)
Alignm length:	169
Alignm identity:	125
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	63, 0
Conread position:	1-182
Cow position:	chr3:58383713-58383896 (view UCSC Genome Browser custom track)
Alignm length:	185
Alignm identity:	143
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	62, 57
Conread position:	1-189
Cow position:	chr3:83920943-83921134 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	144
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	55, 148
Conread position:	1-190
Cow position:	chr3:66978588-66978774 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	133
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	146, 117
Conread position:	1-193
Cow position:	chr3:13899708-13899505 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	152
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	52, 0
Conread position:	1-194
Cow position:	chr3:13577441-13577247 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	141
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	153, 117
Conread position:	1-195
Cow position:	chr3:34316219-34316015 (view UCSC Genome Browser custom track)
Alignm length:	205
Alignm identity:	145
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	48, 0
Conread position:	1-196
Cow position:	chr3:16547421-16547620 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	150
Alignm E-value:	9e-27
Alignm gaps (pig, cow):	52, 71