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Cow genome map

           
Conread name:
           
Ss1.1-rmgp012_h16.5
        

               
Conread position:
               
4-368
               

               
Cow position:
               
chr23:12333961-12334332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
10-281
               

               
Cow position:
               
chr23:3955166-3955454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
11, 108
               

               
Conread position:
               
14-419
               

               
Cow position:
               
chr23:21764684-21765101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 37
               

               
Conread position:
               
25-275
               

               
Cow position:
               
chr23:16058378-16058623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
25-316
               

               
Cow position:
               
chr23:7429228-7429522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
25-316
               

               
Cow position:
               
chr23:35284530-35284236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
25-358
               

               
Cow position:
               
chr23:17092709-17092385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr23:20781604-20781850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
34-334
               

               
Cow position:
               
chr23:40789772-40790059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
35-246
               

               
Cow position:
               
chr23:2259812-2259592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
35-262
               

               
Cow position:
               
chr23:808954-809180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
35-265
               

               
Cow position:
               
chr23:5151776-5152012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
35-265
               

               
Cow position:
               
chr23:29175772-29175995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
35-301
               

               
Cow position:
               
chr23:2055490-2055758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
35-323
               

               
Cow position:
               
chr23:40778050-40778340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
35-329
               

               
Cow position:
               
chr23:40891149-40891444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
35-336
               

               
Cow position:
               
chr23:40648940-40648642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
35-356
               

               
Cow position:
               
chr23:9734202-9734519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
35-377
               

               
Cow position:
               
chr23:5162220-5162561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
35-379
               

               
Cow position:
               
chr23:6367393-6367742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
35-379
               

               
Cow position:
               
chr23:22674652-22674289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
35-419
               

               
Cow position:
               
chr23:35362985-35362607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
124, 20
               

               
Conread position:
               
36-325
               

               
Cow position:
               
chr23:16563631-16563916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 19
               

               
Conread position:
               
41-184
               

               
Cow position:
               
chr23:20259383-20259239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
41-184
               

               
Cow position:
               
chr23:20437769-20437625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
44-325
               

               
Cow position:
               
chr23:19227479-19227752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
45-221
               

               
Cow position:
               
chr23:4437615-4437798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
40, 166
               

               
Conread position:
               
45-286
               

               
Cow position:
               
chr23:25562330-25562084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 163
               

               
Conread position:
               
45-329
               

               
Cow position:
               
chr23:33940358-33940076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
45-356
               

               
Cow position:
               
chr23:344381-344077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 182
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr23:26795107-26794768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
47-356
               

               
Cow position:
               
chr23:18698226-18697915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
48-248
               

               
Cow position:
               
chr23:406361-406170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
117, 38
               

               
Conread position:
               
48-259
               

               
Cow position:
               
chr23:353778-353577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
48-288
               

               
Cow position:
               
chr23:3208819-3208578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
130, 37
               

               
Conread position:
               
48-303
               

               
Cow position:
               
chr23:11080881-11081132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
94, 31
               

               
Conread position:
               
48-325
               

               
Cow position:
               
chr23:18802473-18802192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
91, 37
               

               
Conread position:
               
48-325
               

               
Cow position:
               
chr23:40502713-40502437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
48-326
               

               
Cow position:
               
chr23:10415226-10414946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
133, 37
               

               
Conread position:
               
48-327
               

               
Cow position:
               
chr23:27563909-27563621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
48-328
               

               
Cow position:
               
chr23:1489856-1490121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
48-335
               

               
Cow position:
               
chr23:19758823-19758541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
48-350
               

               
Cow position:
               
chr23:21659737-21660047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
37, 202
               

               
Conread position:
               
48-351
               

               
Cow position:
               
chr23:26632599-26632910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 170
               

               
Conread position:
               
48-355
               

               
Cow position:
               
chr23:534029-534337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
48-355
               

               
Cow position:
               
chr23:9268389-9268689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 139
               

               
Conread position:
               
48-368
               

               
Cow position:
               
chr23:4579235-4578922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
48-368
               

               
Cow position:
               
chr23:33601724-33601416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr23:4968725-4968382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 62
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr23:10416623-10416283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 35
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr23:22396646-22396311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
49-336
               

               
Cow position:
               
chr23:36076020-36075722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
49-355
               

               
Cow position:
               
chr23:6172861-6172568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
181, 35
               

               
Conread position:
               
51-323
               

               
Cow position:
               
chr23:16847765-16848045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 246
               

               
Conread position:
               
51-349
               

               
Cow position:
               
chr23:5426230-5426537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 241
               

               
Conread position:
               
51-354
               

               
Cow position:
               
chr23:1585586-1585290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
34, 130
               

               
Conread position:
               
52-215
               

               
Cow position:
               
chr23:21343446-21343280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
52-232
               

               
Cow position:
               
chr23:4523175-4522990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
52-316
               

               
Cow position:
               
chr23:29521273-29521541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
33, 148
               

               
Conread position:
               
52-319
               

               
Cow position:
               
chr23:8006044-8006315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
52-323
               

               
Cow position:
               
chr23:1605027-1605304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
33, 175
               

               
Conread position:
               
52-323
               

               
Cow position:
               
chr23:8293305-8293577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
34, 76
               

               
Conread position:
               
52-323
               

               
Cow position:
               
chr23:26849101-26848824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
33, 134
               

               
Conread position:
               
52-325
               

               
Cow position:
               
chr23:4810554-4810818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
52-325
               

               
Cow position:
               
chr23:16631068-16631347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 105
               

               
Conread position:
               
52-330
               

               
Cow position:
               
chr23:1428620-1428893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
129, 25
               

               
Conread position:
               
52-334
               

               
Cow position:
               
chr23:27996937-27997216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
52-334
               

               
Cow position:
               
chr23:40443669-40443948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
52-336
               

               
Cow position:
               
chr23:38208514-38208815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
52-337
               

               
Cow position:
               
chr23:4562685-4562976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 173
               

               
Conread position:
               
52-351
               

               
Cow position:
               
chr23:5451125-5451424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
32, 181
               

               
Conread position:
               
52-351
               

               
Cow position:
               
chr23:27544636-27544933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
52-355
               

               
Cow position:
               
chr23:1776827-1776533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
52-356
               

               
Cow position:
               
chr23:1742161-1742464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
52-356
               

               
Cow position:
               
chr23:11626673-11626383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
52-359
               

               
Cow position:
               
chr23:13511537-13511839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
52-363
               

               
Cow position:
               
chr23:2502045-2501736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 32
               

               
Conread position:
               
52-376
               

               
Cow position:
               
chr23:6995170-6994849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
107, 29
               

               
Conread position:
               
52-379
               

               
Cow position:
               
chr23:20057063-20056737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
52-379
               

               
Cow position:
               
chr23:29345956-29345632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 165
               

               
Conread position:
               
52-384
               

               
Cow position:
               
chr23:24704083-24704428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
52-397
               

               
Cow position:
               
chr23:1924032-1923689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 33
               

               
Conread position:
               
52-419
               

               
Cow position:
               
chr23:4504631-4505015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
32, 188
               

               
Conread position:
               
52-419
               

               
Cow position:
               
chr23:22530614-22530234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
33, 189
               

               
Conread position:
               
53-217
               

               
Cow position:
               
chr23:1640616-1640786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
53-318
               

               
Cow position:
               
chr23:29626219-29626487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 40
               

               
Conread position:
               
55-214
               

               
Cow position:
               
chr23:29824259-29824103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 126
               

               
Conread position:
               
55-326
               

               
Cow position:
               
chr23:670427-670699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 162
               

               
Conread position:
               
55-368
               

               
Cow position:
               
chr23:1290100-1290420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
55-377
               

               
Cow position:
               
chr23:15872894-15872568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
30, 186
               

               
Conread position:
               
56-277
               

               
Cow position:
               
chr23:16237450-16237220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
57-252
               

               
Cow position:
               
chr23:32961560-32961357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
57-316
               

               
Cow position:
               
chr23:34315156-34314885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
90, 28
               

               
Conread position:
               
58-170
               

               
Cow position:
               
chr23:29742195-29742303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
58-180
               

               
Cow position:
               
chr23:1610661-1610784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
58-182
               

               
Cow position:
               
chr23:41348839-41348713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
58-184
               

               
Cow position:
               
chr23:38414149-38414029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
58-189
               

               
Cow position:
               
chr23:5395615-5395484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 91
               

               
Conread position:
               
58-205
               

               
Cow position:
               
chr23:1878061-1877913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
101, 27
               

               
Conread position:
               
58-214
               

               
Cow position:
               
chr23:39793263-39793419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
58-216
               

               
Cow position:
               
chr23:26319227-26319389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
58-217
               

               
Cow position:
               
chr23:1690598-1690760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
58-236
               

               
Cow position:
               
chr23:25189150-25189336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
58-259
               

               
Cow position:
               
chr23:38854925-38854722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
58-262
               

               
Cow position:
               
chr23:18367505-18367716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
58-264
               

               
Cow position:
               
chr23:35254428-35254227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
58-265
               

               
Cow position:
               
chr23:4942293-4942092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
58-267
               

               
Cow position:
               
chr23:1068503-1068295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
58-267
               

               
Cow position:
               
chr23:27862141-27862350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
58-271
               

               
Cow position:
               
chr23:4338797-4338586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
58-280
               

               
Cow position:
               
chr23:479337-479564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
27, 168
               

               
Conread position:
               
58-298
               

               
Cow position:
               
chr23:8959406-8959646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
27, 129
               

               
Conread position:
               
58-302
               

               
Cow position:
               
chr23:9595020-9594781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
58-305
               

               
Cow position:
               
chr23:3918288-3918037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
58-306
               

               
Cow position:
               
chr23:7402516-7402760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
127, 26
               

               
Conread position:
               
58-312
               

               
Cow position:
               
chr23:29441190-29440939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
27, 152
               

               
Conread position:
               
58-314
               

               
Cow position:
               
chr23:4608572-4608314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
58-315
               

               
Cow position:
               
chr23:24930263-24930004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
58-316
               

               
Cow position:
               
chr23:25675883-25675631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
58-319
               

               
Cow position:
               
chr23:20248890-20248623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
27, 163
               

               
Conread position:
               
58-322
               

               
Cow position:
               
chr23:36017952-36018225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
27, 237
               

               
Conread position:
               
58-323
               

               
Cow position:
               
chr23:31601648-31601375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
27, 154
               

               
Conread position:
               
58-324
               

               
Cow position:
               
chr23:22496757-22496484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
26, 36
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr23:5870373-5870115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr23:16690252-16689990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
26, 144
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr23:29801242-29801514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr23:30585852-30585573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr23:40817411-40817140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
58-327
               

               
Cow position:
               
chr23:29786543-29786266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 157
               

               
Conread position:
               
58-328
               

               
Cow position:
               
chr23:4980734-4980466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
58-329
               

               
Cow position:
               
chr23:25378464-25378728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
58-330
               

               
Cow position:
               
chr23:2179837-2179580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
58-331
               

               
Cow position:
               
chr23:1942531-1942817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
27, 165
               

               
Conread position:
               
58-331
               

               
Cow position:
               
chr23:4499326-4499049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
58-331
               

               
Cow position:
               
chr23:11380448-11380166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
27, 163
               

               
Conread position:
               
58-334
               

               
Cow position:
               
chr23:8911288-8911550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
58-335
               

               
Cow position:
               
chr23:4726597-4726881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
58-335
               

               
Cow position:
               
chr23:33569945-33570223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr23:3262689-3262408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr23:7596522-7596264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr23:18322610-18322337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 154
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr23:21445926-21446206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr23:30999385-30999654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
27, 167
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr23:35177128-35177408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr23:37065647-37065939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 240
               

               
Conread position:
               
58-337
               

               
Cow position:
               
chr23:1700720-1700982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
58-337
               

               
Cow position:
               
chr23:39806682-39806960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
128, 26
               

               
Conread position:
               
58-344
               

               
Cow position:
               
chr23:19371261-19370977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 24
               

               
Conread position:
               
58-348
               

               
Cow position:
               
chr23:10014345-10014630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 199
               

               
Conread position:
               
58-348
               

               
Cow position:
               
chr23:12050175-12050458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
58-350
               

               
Cow position:
               
chr23:10554202-10553905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 152
               

               
Conread position:
               
58-351
               

               
Cow position:
               
chr23:1721174-1720877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
119, 55
               

               
Conread position:
               
58-351
               

               
Cow position:
               
chr23:2799376-2799686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
58-351
               

               
Cow position:
               
chr23:5617386-5617679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
58-351
               

               
Cow position:
               
chr23:15056832-15056539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
58-351
               

               
Cow position:
               
chr23:20558049-20557739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
27, 179
               

               
Conread position:
               
58-351
               

               
Cow position:
               
chr23:21336679-21336383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
58-354
               

               
Cow position:
               
chr23:6244777-6244488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 101
               

               
Conread position:
               
58-355
               

               
Cow position:
               
chr23:5706810-5707103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 26
               

               
Conread position:
               
58-355
               

               
Cow position:
               
chr23:33717734-33717433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 183
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr23:1883203-1883507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr23:2282368-2282072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 162
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr23:8698253-8698531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr23:16700229-16699931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr23:18296617-18296917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr23:20435241-20434953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr23:29459279-29458988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
58-358
               

               
Cow position:
               
chr23:29034123-29034427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 233
               

               
Conread position:
               
58-363
               

               
Cow position:
               
chr23:25358549-25358842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
58-364
               

               
Cow position:
               
chr23:1803600-1803901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 88
               

               
Conread position:
               
58-365
               

               
Cow position:
               
chr23:14739258-14739567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
58-367
               

               
Cow position:
               
chr23:21452923-21452608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
58-368
               

               
Cow position:
               
chr23:6767700-6768027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
58-368
               

               
Cow position:
               
chr23:13599151-13599461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 163
               

               
Conread position:
               
58-368
               

               
Cow position:
               
chr23:18402476-18402166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
58-370
               

               
Cow position:
               
chr23:3247398-3247713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 16
               

               
Conread position:
               
58-370
               

               
Cow position:
               
chr23:11045294-11045610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
58-370
               

               
Cow position:
               
chr23:38503307-38502971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
58-374
               

               
Cow position:
               
chr23:4529082-4528748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
58-377
               

               
Cow position:
               
chr23:7845099-7845426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 154
               

               
Conread position:
               
58-377
               

               
Cow position:
               
chr23:11129044-11129366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
58-377
               

               
Cow position:
               
chr23:13520263-13520584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
58-377
               

               
Cow position:
               
chr23:26986464-26986140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 21
               

               
Conread position:
               
58-378
               

               
Cow position:
               
chr23:34356443-34356785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 170
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr23:1189092-1188772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr23:1337495-1337162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 170
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr23:15287324-15287006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr23:18902241-18901921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 137
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr23:24509511-24509829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr23:39752924-39753247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 168
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr23:40781136-40781458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
58-383
               

               
Cow position:
               
chr23:24867112-24867447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 235
               

               
Conread position:
               
58-387
               

               
Cow position:
               
chr23:14164590-14164253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 39
               

               
Conread position:
               
58-395
               

               
Cow position:
               
chr23:22804533-22804874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
58-416
               

               
Cow position:
               
chr23:40526163-40525809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
59-225
               

               
Cow position:
               
chr23:587206-587381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
59-227
               

               
Cow position:
               
chr23:1429983-1429818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
163, 25
               

               
Conread position:
               
59-262
               

               
Cow position:
               
chr23:14191360-14191570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
25, 153
               

               
Conread position:
               
59-280
               

               
Cow position:
               
chr23:16609996-16609772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
59-328
               

               
Cow position:
               
chr23:7175431-7175691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
59-329
               

               
Cow position:
               
chr23:1885365-1885091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 168
               

               
Conread position:
               
59-331
               

               
Cow position:
               
chr23:8923414-8923687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 102
               

               
Conread position:
               
59-336
               

               
Cow position:
               
chr23:4972595-4972855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
77, 22
               

               
Conread position:
               
59-336
               

               
Cow position:
               
chr23:39775541-39775815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
59-346
               

               
Cow position:
               
chr23:29242757-29243038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 161
               

               
Conread position:
               
59-349
               

               
Cow position:
               
chr23:11845098-11845379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
59-351
               

               
Cow position:
               
chr23:22399212-22399511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 196
               

               
Conread position:
               
59-355
               

               
Cow position:
               
chr23:11473696-11473395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 89
               

               
Conread position:
               
59-356
               

               
Cow position:
               
chr23:1536138-1536432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
59-377
               

               
Cow position:
               
chr23:4646324-4646642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
26, 142
               

               
Conread position:
               
60-208
               

               
Cow position:
               
chr23:361105-360952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
5, 57
               

               
Conread position:
               
61-244
               

               
Cow position:
               
chr23:5191333-5191524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
124, 81
               

               
Conread position:
               
61-351
               

               
Cow position:
               
chr23:6592893-6592602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 168
               

               
Conread position:
               
62-213
               

               
Cow position:
               
chr23:12896787-12896642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
62-215
               

               
Cow position:
               
chr23:36199107-36199261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
62-248
               

               
Cow position:
               
chr23:11250212-11250403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 151
               

               
Conread position:
               
62-283
               

               
Cow position:
               
chr23:39309301-39309073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 23
               

               
Conread position:
               
62-296
               

               
Cow position:
               
chr23:7484893-7485119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
62-325
               

               
Cow position:
               
chr23:3727588-3727307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
23, 242
               

               
Conread position:
               
62-327
               

               
Cow position:
               
chr23:2316606-2316867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
24, 135
               

               
Conread position:
               
62-329
               

               
Cow position:
               
chr23:1254491-1254769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
62-331
               

               
Cow position:
               
chr23:21788957-21788682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
23, 161
               

               
Conread position:
               
62-336
               

               
Cow position:
               
chr23:792217-791945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
62-336
               

               
Cow position:
               
chr23:19636450-19636172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
62-337
               

               
Cow position:
               
chr23:15710265-15709981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
62-340
               

               
Cow position:
               
chr23:18796876-18796608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 113
               

               
Conread position:
               
62-349
               

               
Cow position:
               
chr23:41472423-41472723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 233
               

               
Conread position:
               
62-356
               

               
Cow position:
               
chr23:2488171-2487881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
23, 88
               

               
Conread position:
               
62-356
               

               
Cow position:
               
chr23:3394683-3394385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 108
               

               
Conread position:
               
62-356
               

               
Cow position:
               
chr23:4104220-4104506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
62-360
               

               
Cow position:
               
chr23:8063367-8063658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
62-360
               

               
Cow position:
               
chr23:16881344-16881048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
62-368
               

               
Cow position:
               
chr23:30662814-30662515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
62-378
               

               
Cow position:
               
chr23:5723357-5723681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
62-398
               

               
Cow position:
               
chr23:38973660-38973992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
62-404
               

               
Cow position:
               
chr23:25864870-25864534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 22
               

               
Conread position:
               
63-204
               

               
Cow position:
               
chr23:3910186-3910049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
63-329
               

               
Cow position:
               
chr23:26949011-26949278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
73, 161
               

               
Conread position:
               
63-336
               

               
Cow position:
               
chr23:1398223-1397949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
63-355
               

               
Cow position:
               
chr23:2457277-2457552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 117
               

               
Conread position:
               
63-370
               

               
Cow position:
               
chr23:20195103-20194796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
64-282
               

               
Cow position:
               
chr23:7221198-7220977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
21, 192
               

               
Conread position:
               
64-331
               

               
Cow position:
               
chr23:29021493-29021752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
64-370
               

               
Cow position:
               
chr23:186990-187305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 146
               

               
Conread position:
               
64-379
               

               
Cow position:
               
chr23:39302531-39302839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
64-395
               

               
Cow position:
               
chr23:11081072-11081409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
65-226
               

               
Cow position:
               
chr23:1605496-1605657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
115, 20
               

               
Conread position:
               
65-316
               

               
Cow position:
               
chr23:15091413-15091668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 143
               

               
Conread position:
               
65-316
               

               
Cow position:
               
chr23:16172476-16172731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 143
               

               
Conread position:
               
65-316
               

               
Cow position:
               
chr23:30622377-30622119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
20, 143
               

               
Conread position:
               
65-328
               

               
Cow position:
               
chr23:11782815-11783083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 143
               

               
Conread position:
               
65-335
               

               
Cow position:
               
chr23:27290965-27290693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
65-336
               

               
Cow position:
               
chr23:40862156-40862435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
20, 232
               

               
Conread position:
               
65-356
               

               
Cow position:
               
chr23:38455369-38455067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 229
               

               
Conread position:
               
65-360
               

               
Cow position:
               
chr23:39049612-39049324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 108
               

               
Conread position:
               
65-419
               

               
Cow position:
               
chr23:20388824-20388462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
265, 43
               

               
Conread position:
               
65-420
               

               
Cow position:
               
chr23:30307723-30308076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
66-202
               

               
Cow position:
               
chr23:20173022-20173157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
66-318
               

               
Cow position:
               
chr23:416978-417218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
66-336
               

               
Cow position:
               
chr23:41590093-41589833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
66-347
               

               
Cow position:
               
chr23:1663505-1663777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
66-355
               

               
Cow position:
               
chr23:21866562-21866845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
66-419
               

               
Cow position:
               
chr23:37224248-37223889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
67-265
               

               
Cow position:
               
chr23:25725731-25725928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
67-323
               

               
Cow position:
               
chr23:41220405-41220141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
17, 168
               

               
Conread position:
               
67-325
               

               
Cow position:
               
chr23:19221837-19221566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 156
               

               
Conread position:
               
67-331
               

               
Cow position:
               
chr23:40844468-40844735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
68-271
               

               
Cow position:
               
chr23:19979127-19978929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
68-276
               

               
Cow position:
               
chr23:14417866-14417651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
68-362
               

               
Cow position:
               
chr23:3282295-3282005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 16
               

               
Conread position:
               
69-227
               

               
Cow position:
               
chr23:23470763-23470918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
69-338
               

               
Cow position:
               
chr23:1767649-1767917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
70-334
               

               
Cow position:
               
chr23:20996282-20996546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
70-379
               

               
Cow position:
               
chr23:40081349-40081644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
72-323
               

               
Cow position:
               
chr23:36129082-36128838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
73-334
               

               
Cow position:
               
chr23:18416226-18415968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
69, 142
               

               
Conread position:
               
74-287
               

               
Cow position:
               
chr23:20752838-20753057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
74-334
               

               
Cow position:
               
chr23:10852874-10853133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
76-365
               

               
Cow position:
               
chr23:19002242-19001950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 143
               

               
Conread position:
               
77-254
               

               
Cow position:
               
chr23:19538165-19537986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
77-282
               

               
Cow position:
               
chr23:3140693-3140892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
77-283
               

               
Cow position:
               
chr23:28645180-28645392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 134
               

               
Conread position:
               
77-379
               

               
Cow position:
               
chr23:29271947-29272241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
9, 103
               

               
Conread position:
               
78-310
               

               
Cow position:
               
chr23:3297466-3297701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 142
               

               
Conread position:
               
78-379
               

               
Cow position:
               
chr23:5389533-5389825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
79-184
               

               
Cow position:
               
chr23:221898-222002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
79-269
               

               
Cow position:
               
chr23:41285753-41285942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
6, 11
               

               
Conread position:
               
79-325
               

               
Cow position:
               
chr23:8837861-8837612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
6, 210
               

               
Conread position:
               
79-355
               

               
Cow position:
               
chr23:22298191-22297929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 59
               

               
Conread position:
               
79-356
               

               
Cow position:
               
chr23:5539992-5540258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
146, 24
               

               
Conread position:
               
79-368
               

               
Cow position:
               
chr23:3967724-3967437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 84
               

               
Conread position:
               
83-192
               

               
Cow position:
               
chr23:27029762-27029872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
83-239
               

               
Cow position:
               
chr23:15866967-15866810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 65
               

               
Conread position:
               
83-325
               

               
Cow position:
               
chr23:10085351-10085108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
83-333
               

               
Cow position:
               
chr23:5515799-5516055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
64, 193
               

               
Conread position:
               
83-337
               

               
Cow position:
               
chr23:1583363-1583616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
138, 102
               

               
Conread position:
               
83-356
               

               
Cow position:
               
chr23:6158387-6158087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 38
               

               
Conread position:
               
83-356
               

               
Cow position:
               
chr23:7574800-7574514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 94
               

               
Conread position:
               
83-375
               

               
Cow position:
               
chr23:7360950-7361237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
83-379
               

               
Cow position:
               
chr23:14838909-14838610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
6, 135
               

               
Conread position:
               
84-283
               

               
Cow position:
               
chr23:6720449-6720244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
84-284
               

               
Cow position:
               
chr23:9713153-9713360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
85-377
               

               
Cow position:
               
chr23:20171412-20171705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
85-379
               

               
Cow position:
               
chr23:9652645-9652355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
26, 116
               

               
Conread position:
               
86-369
               

               
Cow position:
               
chr23:12091524-12091235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
56, 128
               

               
Conread position:
               
87-264
               

               
Cow position:
               
chr23:39028616-39028798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
56, 137
               

               
Conread position:
               
87-379
               

               
Cow position:
               
chr23:1636114-1636413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
48, 140
               

               
Conread position:
               
88-184
               

               
Cow position:
               
chr23:22350498-22350594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
88-379
               

               
Cow position:
               
chr23:19774611-19774901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
97, 131
               

               
Conread position:
               
88-419
               

               
Cow position:
               
chr23:39083290-39083634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 143
               

               
Conread position:
               
89-255
               

               
Cow position:
               
chr23:24809821-24809654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
90-336
               

               
Cow position:
               
chr23:3191289-3191035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
48, 203
               

               
Conread position:
               
91-289
               

               
Cow position:
               
chr23:16072480-16072285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
90, 52
               

               
Conread position:
               
92-261
               

               
Cow position:
               
chr23:33233075-33232893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
92-277
               

               
Cow position:
               
chr23:26942281-26942473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
92-281
               

               
Cow position:
               
chr23:16664725-16664535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
92-351
               

               
Cow position:
               
chr23:35239187-35239456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
92-375
               

               
Cow position:
               
chr23:20744750-20744465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 132
               

               
Conread position:
               
92-377
               

               
Cow position:
               
chr23:18286038-18286326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
27, 144
               

               
Conread position:
               
93-231
               

               
Cow position:
               
chr23:4804295-4804156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
93-268
               

               
Cow position:
               
chr23:9877511-9877328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 135
               

               
Conread position:
               
93-269
               

               
Cow position:
               
chr23:1321356-1321185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
93-278
               

               
Cow position:
               
chr23:23113871-23114064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 135
               

               
Conread position:
               
93-322
               

               
Cow position:
               
chr23:1921385-1921152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 134
               

               
Conread position:
               
93-323
               

               
Cow position:
               
chr23:39339850-39340074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 95
               

               
Conread position:
               
93-329
               

               
Cow position:
               
chr23:4329839-4329593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 202
               

               
Conread position:
               
93-336
               

               
Cow position:
               
chr23:11434418-11434171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
53, 176
               

               
Conread position:
               
93-336
               

               
Cow position:
               
chr23:33622310-33622060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 119
               

               
Conread position:
               
93-336
               

               
Cow position:
               
chr23:39813347-39813589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
92, 47
               

               
Conread position:
               
93-337
               

               
Cow position:
               
chr23:11315181-11314943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
122, 95
               

               
Conread position:
               
93-346
               

               
Cow position:
               
chr23:4996257-4996000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
93-354
               

               
Cow position:
               
chr23:15742934-15743199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 107
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr23:39778248-39778512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 85
               

               
Conread position:
               
93-360
               

               
Cow position:
               
chr23:31493714-31493979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
236, 66
               

               
Conread position:
               
93-368
               

               
Cow position:
               
chr23:13945871-13946160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
50, 146
               

               
Conread position:
               
93-370
               

               
Cow position:
               
chr23:4966662-4966945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
50, 69
               

               
Conread position:
               
93-377
               

               
Cow position:
               
chr23:29069602-29069309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
93-378
               

               
Cow position:
               
chr23:5603433-5603153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 47
               

               
Conread position:
               
93-379
               

               
Cow position:
               
chr23:9599338-9599633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 184
               

               
Conread position:
               
93-406
               

               
Cow position:
               
chr23:36309263-36309576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 164
               

               
Conread position:
               
95-256
               

               
Cow position:
               
chr23:18107500-18107334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 119
               

               
Conread position:
               
95-270
               

               
Cow position:
               
chr23:40485125-40484946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 123
               

               
Conread position:
               
95-324
               

               
Cow position:
               
chr23:6031725-6031952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
146, 92
               

               
Conread position:
               
95-336
               

               
Cow position:
               
chr23:11069066-11069301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
95-351
               

               
Cow position:
               
chr23:33711606-33711865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
91, 123
               

               
Conread position:
               
95-364
               

               
Cow position:
               
chr23:13555588-13555318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
47, 54
               

               
Conread position:
               
95-379
               

               
Cow position:
               
chr23:35938191-35938477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
96-282
               

               
Cow position:
               
chr23:2761826-2762013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
96-349
               

               
Cow position:
               
chr23:34348171-34348418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 124
               

               
Conread position:
               
96-379
               

               
Cow position:
               
chr23:23409581-23409867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 131
               

               
Conread position:
               
97-334
               

               
Cow position:
               
chr23:16583069-16582822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
45, 129
               

               
Conread position:
               
98-299
               

               
Cow position:
               
chr23:33153342-33153141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
85, 122
               

               
Conread position:
               
98-325
               

               
Cow position:
               
chr23:349880-349646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
38, 196
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr23:1655736-1655997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
16, 128
               

               
Conread position:
               
99-356
               

               
Cow position:
               
chr23:21502789-21502520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
100-336
               

               
Cow position:
               
chr23:37886-38117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
101-272
               

               
Cow position:
               
chr23:1743652-1743824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
101-324
               

               
Cow position:
               
chr23:12470788-12471006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
101-325
               

               
Cow position:
               
chr23:10829732-10829504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
101-377
               

               
Cow position:
               
chr23:5436794-5436511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
101-378
               

               
Cow position:
               
chr23:32480186-32479873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
103-310
               

               
Cow position:
               
chr23:1599373-1599585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
114, 187
               

               
Conread position:
               
103-357
               

               
Cow position:
               
chr23:24984318-24984058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr23:34416414-34416637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 111
               

               
Conread position:
               
109-351
               

               
Cow position:
               
chr23:17404697-17404945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 102
               

               
Conread position:
               
109-356
               

               
Cow position:
               
chr23:3409046-3408794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
106, 69
               

               
Conread position:
               
110-334
               

               
Cow position:
               
chr23:26050895-26051126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
76, 181
               

               
Conread position:
               
110-337
               

               
Cow position:
               
chr23:1647478-1647707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
74, 122
               

               
Conread position:
               
110-379
               

               
Cow position:
               
chr23:31970675-31970405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
111-356
               

               
Cow position:
               
chr23:4335940-4336177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
68, 17
               

               
Conread position:
               
114-327
               

               
Cow position:
               
chr23:5745040-5745261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
17, 180
               

               
Conread position:
               
114-336
               

               
Cow position:
               
chr23:6223853-6224063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
216, 27
               

               
Conread position:
               
114-356
               

               
Cow position:
               
chr23:12363755-12363507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 100
               

               
Conread position:
               
114-378
               

               
Cow position:
               
chr23:22414430-22414172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
115-325
               

               
Cow position:
               
chr23:36244211-36244424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
115-334
               

               
Cow position:
               
chr23:5437134-5436916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
115-368
               

               
Cow position:
               
chr23:30950824-30951080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 52
               

               
Conread position:
               
118-325
               

               
Cow position:
               
chr23:468593-468388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr23:5732417-5732685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 174
               

               
Conread position:
               
119-328
               

               
Cow position:
               
chr23:3434042-3433833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
69, 169
               

               
Conread position:
               
120-361
               

               
Cow position:
               
chr23:21974176-21974409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
121-356
               

               
Cow position:
               
chr23:28945194-28944958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
65, 104
               

               
Conread position:
               
122-295
               

               
Cow position:
               
chr23:2801813-2801635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
122-336
               

               
Cow position:
               
chr23:20604835-20604629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
170, 64
               

               
Conread position:
               
122-355
               

               
Cow position:
               
chr23:4908383-4908610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
95, 64
               

               
Conread position:
               
123-334
               

               
Cow position:
               
chr23:3890694-3890487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
123-341
               

               
Cow position:
               
chr23:25669211-25668997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
123-356
               

               
Cow position:
               
chr23:16076287-16076055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
124-349
               

               
Cow position:
               
chr23:9226147-9226381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 134
               

               
Conread position:
               
124-370
               

               
Cow position:
               
chr23:36172395-36172647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
125-355
               

               
Cow position:
               
chr23:5795352-5795587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 146
               

               
Conread position:
               
125-368
               

               
Cow position:
               
chr23:37897790-37898041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
127-359
               

               
Cow position:
               
chr23:1438173-1438406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
129-277
               

               
Cow position:
               
chr23:4445842-4445687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
129-289
               

               
Cow position:
               
chr23:40334269-40334105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 82
               

               
Conread position:
               
129-316
               

               
Cow position:
               
chr23:9805873-9805682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
8, 90
               

               
Conread position:
               
130-368
               

               
Cow position:
               
chr23:10497585-10497820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
131-351
               

               
Cow position:
               
chr23:1701051-1701277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
54, 100
               

               
Conread position:
               
132-331
               

               
Cow position:
               
chr23:16797929-16797720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
5, 162
               

               
Conread position:
               
134-356
               

               
Cow position:
               
chr23:307341-307566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
77, 152
               

               
Conread position:
               
134-364
               

               
Cow position:
               
chr23:39573373-39573132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 143
               

               
Conread position:
               
135-283
               

               
Cow position:
               
chr23:1670786-1670939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
53, 96
               

               
Conread position:
               
135-356
               

               
Cow position:
               
chr23:306409-306633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
76, 151
               

               
Conread position:
               
135-380
               

               
Cow position:
               
chr23:3245031-3244769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
51, 156
               

               
Conread position:
               
135-415
               

               
Cow position:
               
chr23:27529220-27528913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
51, 175
               

               
Conread position:
               
136-379
               

               
Cow position:
               
chr23:283502-283256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
76, 40
               

               
Conread position:
               
139-419
               

               
Cow position:
               
chr23:6035330-6035612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
204, 69
               

               
Conread position:
               
140-336
               

               
Cow position:
               
chr23:39780646-39780844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
140-356
               

               
Cow position:
               
chr23:22574027-22573798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
141-328
               

               
Cow position:
               
chr23:39275780-39275972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
41, 149
               

               
Conread position:
               
141-356
               

               
Cow position:
               
chr23:1876601-1876822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
141-356
               

               
Cow position:
               
chr23:40995070-40995281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
188, 35
               

               
Conread position:
               
141-370
               

               
Cow position:
               
chr23:1222349-1222111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
42, 150
               

               
Conread position:
               
142-368
               

               
Cow position:
               
chr23:11212397-11212632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr23:4795066-4795285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
42, 86
               

               
Conread position:
               
145-325
               

               
Cow position:
               
chr23:19173458-19173286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
146-272
               

               
Cow position:
               
chr23:8379032-8378905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
146-363
               

               
Cow position:
               
chr23:24685147-24685361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
183, 59
               

               
Conread position:
               
147-325
               

               
Cow position:
               
chr23:36267906-36268095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
147-327
               

               
Cow position:
               
chr23:15280602-15280417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
39, 144
               

               
Conread position:
               
147-356
               

               
Cow position:
               
chr23:14523887-14524097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
70, 5
               

               
Conread position:
               
148-323
               

               
Cow position:
               
chr23:18036760-18036582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 63
               

               
Conread position:
               
148-351
               

               
Cow position:
               
chr23:18403904-18404111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
149-370
               

               
Cow position:
               
chr23:3522651-3522872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 8
               

               
Conread position:
               
150-322
               

               
Cow position:
               
chr23:4343301-4343473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 136
               

               
Conread position:
               
150-355
               

               
Cow position:
               
chr23:24966559-24966353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
179, 134
               

               
Conread position:
               
150-416
               

               
Cow position:
               
chr23:2405803-2406069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
41, 70
               

               
Conread position:
               
155-332
               

               
Cow position:
               
chr23:11770895-11771071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
155-416
               

               
Cow position:
               
chr23:19872763-19872500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
175, 12
               

               
Conread position:
               
158-364
               

               
Cow position:
               
chr23:20002162-20002372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
160-370
               

               
Cow position:
               
chr23:3430984-3431196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 105
               

               
Conread position:
               
160-379
               

               
Cow position:
               
chr23:3293601-3293834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
26, 132
               

               
Conread position:
               
162-356
               

               
Cow position:
               
chr23:38845523-38845710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 58
               

               
Conread position:
               
164-325
               

               
Cow position:
               
chr23:14462432-14462589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
164-338
               

               
Cow position:
               
chr23:39324080-39324252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
164-356
               

               
Cow position:
               
chr23:3814362-3814170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
164-356
               

               
Cow position:
               
chr23:17486907-17486713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
67, 121
               

               
Conread position:
               
164-358
               

               
Cow position:
               
chr23:8917755-8917566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
164-368
               

               
Cow position:
               
chr23:18749144-18748946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
165-337
               

               
Cow position:
               
chr23:19769508-19769675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
52, 116
               

               
Conread position:
               
166-356
               

               
Cow position:
               
chr23:21440080-21439891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
49, 119
               

               
Conread position:
               
166-362
               

               
Cow position:
               
chr23:1403883-1403689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
163, 51
               

               
Conread position:
               
167-325
               

               
Cow position:
               
chr23:18238610-18238449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
167-416
               

               
Cow position:
               
chr23:5237506-5237239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
168-356
               

               
Cow position:
               
chr23:5881595-5881407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
160, 68
               

               
Conread position:
               
170-379
               

               
Cow position:
               
chr23:38732174-38732376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
174-349
               

               
Cow position:
               
chr23:1981725-1981557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
155, 32
               

               
Conread position:
               
179-298
               

               
Cow position:
               
chr23:39520515-39520398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
179-308
               

               
Cow position:
               
chr23:22415000-22415128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
179-328
               

               
Cow position:
               
chr23:308868-308723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
179-337
               

               
Cow position:
               
chr23:4470567-4470409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
37, 108
               

               
Conread position:
               
179-344
               

               
Cow position:
               
chr23:1499553-1499391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
179-348
               

               
Cow position:
               
chr23:35369111-35368943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
150, 40
               

               
Conread position:
               
179-355
               

               
Cow position:
               
chr23:16961230-16961407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
150, 105
               

               
Conread position:
               
179-356
               

               
Cow position:
               
chr23:349016-348837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 106
               

               
Conread position:
               
179-356
               

               
Cow position:
               
chr23:35965077-35965257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 107
               

               
Conread position:
               
179-368
               

               
Cow position:
               
chr23:10876330-10876523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
179-419
               

               
Cow position:
               
chr23:1863406-1863663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 106
               

               
Conread position:
               
180-319
               

               
Cow position:
               
chr23:40391410-40391548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr23:18822925-18823100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr23:35247299-35247478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
180-366
               

               
Cow position:
               
chr23:24480024-24479829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
180-368
               

               
Cow position:
               
chr23:20539318-20539510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
39, 105
               

               
Conread position:
               
182-320
               

               
Cow position:
               
chr23:5400603-5400739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
182-356
               

               
Cow position:
               
chr23:19760851-19760675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
182-379
               

               
Cow position:
               
chr23:13202424-13202225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
183-325
               

               
Cow position:
               
chr23:39524622-39524481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
183-336
               

               
Cow position:
               
chr23:41348689-41348534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
183-356
               

               
Cow position:
               
chr23:22105499-22105671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 42
               

               
Conread position:
               
183-356
               

               
Cow position:
               
chr23:35503723-35503883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
148, 10
               

               
Conread position:
               
184-356
               

               
Cow position:
               
chr23:3830261-3830090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
145, 100
               

               
Conread position:
               
185-336
               

               
Cow position:
               
chr23:28530007-28529865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
145, 26
               

               
Conread position:
               
188-335
               

               
Cow position:
               
chr23:21309469-21309323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
140, 30
               

               
Conread position:
               
188-336
               

               
Cow position:
               
chr23:4916628-4916773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
143, 31
               

               
Conread position:
               
189-336
               

               
Cow position:
               
chr23:3244522-3244379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
141, 30
               

               
Conread position:
               
189-356
               

               
Cow position:
               
chr23:26283669-26283833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 8
               

               
Conread position:
               
190-343
               

               
Cow position:
               
chr23:4877302-4877453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
196-356
               

               
Cow position:
               
chr23:2160684-2160529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
200-368
               

               
Cow position:
               
chr23:360735-360565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
204-402
               

               
Cow position:
               
chr23:29479845-29480047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
204-416
               

               
Cow position:
               
chr23:30655852-30655651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
126, 75
               

               
Conread position:
               
210-414
               

               
Cow position:
               
chr23:23904364-23904148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
120, 74
               

               
Conread position:
               
211-344
               

               
Cow position:
               
chr23:9234856-9234726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
214-337
               

               
Cow position:
               
chr23:32411879-32412004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 72
               

               
Conread position:
               
216-360
               

               
Cow position:
               
chr23:22586850-22586992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
113, 55
               

               
Conread position:
               
218-420
               

               
Cow position:
               
chr23:14895702-14895484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
112, 66
               

               
Conread position:
               
219-333
               

               
Cow position:
               
chr23:25371800-25371911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
219-351
               

               
Cow position:
               
chr23:2358853-2358986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
110, 65
               

               
Conread position:
               
219-363
               

               
Cow position:
               
chr23:17231122-17231264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 65
               

               
Conread position:
               
219-416
               

               
Cow position:
               
chr23:20615354-20615148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
134, 65
               

               
Conread position:
               
221-332
               

               
Cow position:
               
chr23:20563672-20563782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 7
               

               
Conread position:
               
221-334
               

               
Cow position:
               
chr23:1936668-1936555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
221-341
               

               
Cow position:
               
chr23:57189-57067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
95, 64
               

               
Conread position:
               
221-349
               

               
Cow position:
               
chr23:3234807-3234679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 63
               

               
Conread position:
               
221-356
               

               
Cow position:
               
chr23:5785819-5785955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
108, 63
               

               
Conread position:
               
221-379
               

               
Cow position:
               
chr23:7696533-7696691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
222-379
               

               
Cow position:
               
chr23:30311956-30311785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 62
               

               
Conread position:
               
223-335
               

               
Cow position:
               
chr23:21384941-21384831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
223-380
               

               
Cow position:
               
chr23:7709767-7709928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
106, 61
               

               
Conread position:
               
224-362
               

               
Cow position:
               
chr23:4054195-4054334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
106, 61
               

               
Conread position:
               
225-348
               

               
Cow position:
               
chr23:22238843-22238718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
104, 59
               

               
Conread position:
               
225-368
               

               
Cow position:
               
chr23:27848975-27849120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
104, 60
               

               
Conread position:
               
226-356
               

               
Cow position:
               
chr23:21438473-21438608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 58
               

               
Conread position:
               
227-356
               

               
Cow position:
               
chr23:3835614-3835485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 57
               

               
Conread position:
               
227-370
               

               
Cow position:
               
chr23:14569520-14569376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
101, 57
               

               
Conread position:
               
229-351
               

               
Cow position:
               
chr23:37118727-37118608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 57
               

               
Conread position:
               
229-359
               

               
Cow position:
               
chr23:1803925-1803798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               
Show alignments to all cow chromosomes.