• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-rmgp012_h16.5
        

               
Conread position:
               
1-331
               

               
Cow position:
               
chr27:6788164-6787830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr27:20055750-20056078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
21, 232
               

               
Conread position:
               
3-191
               

               
Cow position:
               
chr27:20548274-20548459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr27:4944324-4944692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr27:13252217-13251838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 217
               

               
Conread position:
               
12-216
               

               
Cow position:
               
chr27:13375835-13376034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
16-255
               

               
Cow position:
               
chr27:20786587-20786344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
22-262
               

               
Cow position:
               
chr27:4011858-4011622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
22-384
               

               
Cow position:
               
chr27:20247620-20247984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
28-232
               

               
Cow position:
               
chr27:13860559-13860763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 131
               

               
Conread position:
               
32-333
               

               
Cow position:
               
chr27:30374397-30374696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
33-401
               

               
Cow position:
               
chr27:26424413-26424777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
49, 61
               

               
Conread position:
               
35-180
               

               
Cow position:
               
chr27:21452899-21453049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
35-245
               

               
Cow position:
               
chr27:15858920-15859129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
35-269
               

               
Cow position:
               
chr27:27550577-27550798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
150, 20
               

               
Conread position:
               
35-282
               

               
Cow position:
               
chr27:13198087-13197828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
50, 10
               

               
Conread position:
               
35-325
               

               
Cow position:
               
chr27:18739558-18739258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
35-335
               

               
Cow position:
               
chr27:26508987-26509283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
35-355
               

               
Cow position:
               
chr27:4673191-4672861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
35-355
               

               
Cow position:
               
chr27:24014570-24014890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 18
               

               
Conread position:
               
35-356
               

               
Cow position:
               
chr27:27640821-27641162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
35-357
               

               
Cow position:
               
chr27:28496204-28496523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
35-360
               

               
Cow position:
               
chr27:19718094-19717760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
35-364
               

               
Cow position:
               
chr27:8353647-8353319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
35-370
               

               
Cow position:
               
chr27:9169474-9169804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
35-379
               

               
Cow position:
               
chr27:23930135-23929792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
38-401
               

               
Cow position:
               
chr27:29431629-29431275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 119
               

               
Conread position:
               
40-350
               

               
Cow position:
               
chr27:17994773-17995088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
43-310
               

               
Cow position:
               
chr27:6052263-6051993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 165
               

               
Conread position:
               
45-316
               

               
Cow position:
               
chr27:4983440-4983715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
39, 166
               

               
Conread position:
               
45-336
               

               
Cow position:
               
chr27:30582899-30582604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
41, 50
               

               
Conread position:
               
46-314
               

               
Cow position:
               
chr27:22549621-22549874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
46-316
               

               
Cow position:
               
chr27:13410009-13410272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 150
               

               
Conread position:
               
47-351
               

               
Cow position:
               
chr27:28518445-28518149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 38
               

               
Conread position:
               
47-356
               

               
Cow position:
               
chr27:6550610-6550312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
47-364
               

               
Cow position:
               
chr27:10992513-10992197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
48-183
               

               
Cow position:
               
chr27:30989685-30989819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
48-191
               

               
Cow position:
               
chr27:23558227-23558370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
37, 123
               

               
Conread position:
               
48-252
               

               
Cow position:
               
chr27:16871757-16871963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
48-318
               

               
Cow position:
               
chr27:28018495-28018226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 83
               

               
Conread position:
               
48-334
               

               
Cow position:
               
chr27:13317796-13318103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
36, 258
               

               
Conread position:
               
48-336
               

               
Cow position:
               
chr27:1058521-1058806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 116
               

               
Conread position:
               
48-351
               

               
Cow position:
               
chr27:536616-536317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
282, 37
               

               
Conread position:
               
48-351
               

               
Cow position:
               
chr27:11480471-11480783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
98, 37
               

               
Conread position:
               
48-356
               

               
Cow position:
               
chr27:30988956-30988646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
48-364
               

               
Cow position:
               
chr27:18593429-18593114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 170
               

               
Conread position:
               
48-367
               

               
Cow position:
               
chr27:25277295-25276979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
48-418
               

               
Cow position:
               
chr27:25998863-25998493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
49-274
               

               
Cow position:
               
chr27:30362400-30362177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
36, 6
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr27:22171456-22171148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 28
               

               
Conread position:
               
51-355
               

               
Cow position:
               
chr27:29493761-29494051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
193, 34
               

               
Conread position:
               
52-183
               

               
Cow position:
               
chr27:16620146-16620014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
52-204
               

               
Cow position:
               
chr27:26625279-26625130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
52-245
               

               
Cow position:
               
chr27:16513727-16513915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
52-271
               

               
Cow position:
               
chr27:27528207-27528421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
52-276
               

               
Cow position:
               
chr27:154523-154292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
52-276
               

               
Cow position:
               
chr27:6523200-6522973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
52-277
               

               
Cow position:
               
chr27:11255667-11255453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
100, 43
               

               
Conread position:
               
52-277
               

               
Cow position:
               
chr27:27040762-27040530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
52-323
               

               
Cow position:
               
chr27:11815605-11815864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
52-324
               

               
Cow position:
               
chr27:815519-815244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 29
               

               
Conread position:
               
52-326
               

               
Cow position:
               
chr27:23472410-23472139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
52-328
               

               
Cow position:
               
chr27:26426363-26426094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 166
               

               
Conread position:
               
52-334
               

               
Cow position:
               
chr27:12516353-12516065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
52-336
               

               
Cow position:
               
chr27:13411202-13411499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
52-349
               

               
Cow position:
               
chr27:10980018-10979719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 158
               

               
Conread position:
               
52-351
               

               
Cow position:
               
chr27:10307141-10307444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
22, 98
               

               
Conread position:
               
52-355
               

               
Cow position:
               
chr27:15668612-15668922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 238
               

               
Conread position:
               
52-355
               

               
Cow position:
               
chr27:22220708-22220403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
52-355
               

               
Cow position:
               
chr27:26959466-26959766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
52-356
               

               
Cow position:
               
chr27:299229-299532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 100
               

               
Conread position:
               
52-356
               

               
Cow position:
               
chr27:6541779-6541480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
52-356
               

               
Cow position:
               
chr27:24227639-24227951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
52-356
               

               
Cow position:
               
chr27:30915156-30914858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
131, 33
               

               
Conread position:
               
52-363
               

               
Cow position:
               
chr27:16781019-16780711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
52-364
               

               
Cow position:
               
chr27:14670226-14670542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 147
               

               
Conread position:
               
52-364
               

               
Cow position:
               
chr27:30354189-30354504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 32
               

               
Conread position:
               
52-368
               

               
Cow position:
               
chr27:22547250-22547559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 162
               

               
Conread position:
               
52-368
               

               
Cow position:
               
chr27:28206952-28206639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 143
               

               
Conread position:
               
52-371
               

               
Cow position:
               
chr27:4385912-4386228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
52-372
               

               
Cow position:
               
chr27:23891092-23890771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
52-377
               

               
Cow position:
               
chr27:30765186-30764849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
52-416
               

               
Cow position:
               
chr27:20553871-20553520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 32
               

               
Conread position:
               
52-416
               

               
Cow position:
               
chr27:27613484-27613839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
53-380
               

               
Cow position:
               
chr27:21668971-21669298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 32
               

               
Conread position:
               
54-277
               

               
Cow position:
               
chr27:16493724-16493508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
54-353
               

               
Cow position:
               
chr27:27683964-27684261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 172
               

               
Conread position:
               
55-276
               

               
Cow position:
               
chr27:21569692-21569911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
55-334
               

               
Cow position:
               
chr27:28270995-28271279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
55-336
               

               
Cow position:
               
chr27:29831535-29831828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
55-336
               

               
Cow position:
               
chr27:30868587-30868871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
55-355
               

               
Cow position:
               
chr27:27460420-27460721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
31, 206
               

               
Conread position:
               
55-363
               

               
Cow position:
               
chr27:21350864-21351176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 161
               

               
Conread position:
               
58-171
               

               
Cow position:
               
chr27:26322502-26322388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
58-178
               

               
Cow position:
               
chr27:6674389-6674266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
58-184
               

               
Cow position:
               
chr27:22179649-22179769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
58-186
               

               
Cow position:
               
chr27:27055726-27055597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
58-212
               

               
Cow position:
               
chr27:18434322-18434479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
58-230
               

               
Cow position:
               
chr27:20592132-20591954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
58-231
               

               
Cow position:
               
chr27:17926488-17926648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
58-233
               

               
Cow position:
               
chr27:15200846-15200673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
58-238
               

               
Cow position:
               
chr27:18215204-18215020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 161
               

               
Conread position:
               
58-261
               

               
Cow position:
               
chr27:29251028-29250824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 161
               

               
Conread position:
               
58-262
               

               
Cow position:
               
chr27:1183727-1183941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
58-262
               

               
Cow position:
               
chr27:31147525-31147726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
58-266
               

               
Cow position:
               
chr27:2298560-2298345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 162
               

               
Conread position:
               
58-267
               

               
Cow position:
               
chr27:6058651-6058441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
27, 161
               

               
Conread position:
               
58-269
               

               
Cow position:
               
chr27:27449286-27449498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
58-271
               

               
Cow position:
               
chr27:14902500-14902719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 66
               

               
Conread position:
               
58-275
               

               
Cow position:
               
chr27:29283260-29283478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
58-283
               

               
Cow position:
               
chr27:23070211-23070437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
58-283
               

               
Cow position:
               
chr27:27512939-27512709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
27, 157
               

               
Conread position:
               
58-296
               

               
Cow position:
               
chr27:2682995-2683235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
58-305
               

               
Cow position:
               
chr27:26224120-26224369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
27, 167
               

               
Conread position:
               
58-310
               

               
Cow position:
               
chr27:23576392-23576642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
58-311
               

               
Cow position:
               
chr27:18030908-18031180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
27, 216
               

               
Conread position:
               
58-316
               

               
Cow position:
               
chr27:19668640-19668917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
27, 247
               

               
Conread position:
               
58-317
               

               
Cow position:
               
chr27:24999586-24999851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
26, 165
               

               
Conread position:
               
58-318
               

               
Cow position:
               
chr27:9090653-9090902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
58-319
               

               
Cow position:
               
chr27:4036-3784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
58-319
               

               
Cow position:
               
chr27:15204083-15204342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
58-323
               

               
Cow position:
               
chr27:11535948-11536222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
28, 103
               

               
Conread position:
               
58-324
               

               
Cow position:
               
chr27:29799092-29798837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr27:11296406-11296151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr27:13638844-13639102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr27:13841525-13841250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 132
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr27:16786975-16786710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
27, 153
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr27:21408404-21408682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 174
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr27:22426680-22426951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
27, 44
               

               
Conread position:
               
58-327
               

               
Cow position:
               
chr27:6500213-6499940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 156
               

               
Conread position:
               
58-327
               

               
Cow position:
               
chr27:22513526-22513798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
58-328
               

               
Cow position:
               
chr27:8629723-8629992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
58-329
               

               
Cow position:
               
chr27:25380139-25379865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
58-331
               

               
Cow position:
               
chr27:7346809-7346548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
58-332
               

               
Cow position:
               
chr27:18507780-18507523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
58-334
               

               
Cow position:
               
chr27:11562993-11563268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
58-334
               

               
Cow position:
               
chr27:23662456-23662721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
58-335
               

               
Cow position:
               
chr27:2957556-2957282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 138
               

               
Conread position:
               
58-335
               

               
Cow position:
               
chr27:26413107-26413384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr27:12278124-12278379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr27:15643324-15643044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 171
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr27:31230945-31231212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
58-337
               

               
Cow position:
               
chr27:4812728-4813015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 234
               

               
Conread position:
               
58-342
               

               
Cow position:
               
chr27:4819562-4819849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
58-344
               

               
Cow position:
               
chr27:30551144-30550851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
124, 26
               

               
Conread position:
               
58-351
               

               
Cow position:
               
chr27:15866372-15866072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
58-351
               

               
Cow position:
               
chr27:19589624-19589326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
58-351
               

               
Cow position:
               
chr27:22440288-22439994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
58-351
               

               
Cow position:
               
chr27:28921748-28922039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
58-355
               

               
Cow position:
               
chr27:19685566-19685864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
58-355
               

               
Cow position:
               
chr27:23452628-23452311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
27, 197
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr27:8062208-8062501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
27, 71
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr27:15454360-15454059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr27:24331874-24331569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr27:27270390-27270694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 56
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr27:30406883-30407188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
27, 208
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr27:30871911-30872208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
58-362
               

               
Cow position:
               
chr27:6074065-6073774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
111, 26
               

               
Conread position:
               
58-364
               

               
Cow position:
               
chr27:17472961-17472641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
58-364
               

               
Cow position:
               
chr27:22418616-22418926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
58-368
               

               
Cow position:
               
chr27:1290716-1291018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
272, 31
               

               
Conread position:
               
58-368
               

               
Cow position:
               
chr27:19546354-19546676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
58-368
               

               
Cow position:
               
chr27:23483371-23483063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
122, 40
               

               
Conread position:
               
58-368
               

               
Cow position:
               
chr27:27856482-27856169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
58-370
               

               
Cow position:
               
chr27:27064291-27064605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
58-372
               

               
Cow position:
               
chr27:16284621-16284308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 123
               

               
Conread position:
               
58-376
               

               
Cow position:
               
chr27:4835459-4835779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 107
               

               
Conread position:
               
58-377
               

               
Cow position:
               
chr27:14343319-14343620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 19
               

               
Conread position:
               
58-377
               

               
Cow position:
               
chr27:24477565-24477242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 165
               

               
Conread position:
               
58-377
               

               
Cow position:
               
chr27:27843844-27844176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 93
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr27:17397298-17397629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 235
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr27:21393356-21393679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr27:22035225-22035557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 183
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr27:24446008-24446324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr27:28001669-28001989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
84, 28
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr27:28190069-28190377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
115, 26
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr27:30890439-30890115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr27:31372831-31373158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
58-387
               

               
Cow position:
               
chr27:7731100-7731438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
58-416
               

               
Cow position:
               
chr27:6454363-6453986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
27, 83
               

               
Conread position:
               
58-416
               

               
Cow position:
               
chr27:26151168-26150807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
58-417
               

               
Cow position:
               
chr27:28164262-28164614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
130, 26
               

               
Conread position:
               
58-420
               

               
Cow position:
               
chr27:19896905-19896542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
59-247
               

               
Cow position:
               
chr27:30177427-30177609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
59-258
               

               
Cow position:
               
chr27:26398111-26398311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
59-261
               

               
Cow position:
               
chr27:30670885-30670684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
59-265
               

               
Cow position:
               
chr27:22268652-22268441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
26, 166
               

               
Conread position:
               
59-269
               

               
Cow position:
               
chr27:28061617-28061825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
59-277
               

               
Cow position:
               
chr27:25411372-25411593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
106, 26
               

               
Conread position:
               
59-328
               

               
Cow position:
               
chr27:24321337-24321068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
27, 161
               

               
Conread position:
               
59-328
               

               
Cow position:
               
chr27:30792789-30793055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
59-329
               

               
Cow position:
               
chr27:3306921-3306652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 70
               

               
Conread position:
               
59-337
               

               
Cow position:
               
chr27:7212565-7212845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
59-337
               

               
Cow position:
               
chr27:26984489-26984215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
59-356
               

               
Cow position:
               
chr27:16705394-16705099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
59-356
               

               
Cow position:
               
chr27:20036981-20037266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 25
               

               
Conread position:
               
59-357
               

               
Cow position:
               
chr27:28467291-28467601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 170
               

               
Conread position:
               
59-358
               

               
Cow position:
               
chr27:29312522-29312828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
59-419
               

               
Cow position:
               
chr27:8962122-8962485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
60-379
               

               
Cow position:
               
chr27:26864972-26865294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
121, 23
               

               
Conread position:
               
61-336
               

               
Cow position:
               
chr27:25783747-25783495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
61-349
               

               
Cow position:
               
chr27:24550274-24550553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
173, 21
               

               
Conread position:
               
61-356
               

               
Cow position:
               
chr27:23882229-23882519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
61-420
               

               
Cow position:
               
chr27:26218856-26218483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
24, 29
               

               
Conread position:
               
62-228
               

               
Cow position:
               
chr27:1884181-1884023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
153, 22
               

               
Conread position:
               
62-265
               

               
Cow position:
               
chr27:28038193-28038399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 169
               

               
Conread position:
               
62-292
               

               
Cow position:
               
chr27:732716-732488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
62-306
               

               
Cow position:
               
chr27:29816477-29816720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
62-321
               

               
Cow position:
               
chr27:12429553-12429292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 160
               

               
Conread position:
               
62-322
               

               
Cow position:
               
chr27:18544142-18543871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
62-323
               

               
Cow position:
               
chr27:29977393-29977134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
23, 33
               

               
Conread position:
               
62-328
               

               
Cow position:
               
chr27:26239169-26238903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
62-331
               

               
Cow position:
               
chr27:10582507-10582247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
62-333
               

               
Cow position:
               
chr27:4390110-4390386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
62-334
               

               
Cow position:
               
chr27:7649438-7649711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
12, 150
               

               
Conread position:
               
62-336
               

               
Cow position:
               
chr27:26427984-26428263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 149
               

               
Conread position:
               
62-336
               

               
Cow position:
               
chr27:27019956-27020228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
62-336
               

               
Cow position:
               
chr27:29515715-29515976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
62-339
               

               
Cow position:
               
chr27:27245206-27245487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
62-344
               

               
Cow position:
               
chr27:13875879-13875597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 225
               

               
Conread position:
               
62-351
               

               
Cow position:
               
chr27:7412527-7412246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
62-355
               

               
Cow position:
               
chr27:1123179-1122881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 157
               

               
Conread position:
               
62-356
               

               
Cow position:
               
chr27:27632465-27632750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
62-364
               

               
Cow position:
               
chr27:427117-426810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 158
               

               
Conread position:
               
62-368
               

               
Cow position:
               
chr27:19388163-19387854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 156
               

               
Conread position:
               
62-370
               

               
Cow position:
               
chr27:23632746-23632437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 109
               

               
Conread position:
               
62-370
               

               
Cow position:
               
chr27:26807419-26807730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
62-379
               

               
Cow position:
               
chr27:15408899-15409211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
63-250
               

               
Cow position:
               
chr27:29399958-29399758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
63-316
               

               
Cow position:
               
chr27:11081340-11081091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
63-334
               

               
Cow position:
               
chr27:28931644-28931930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 226
               

               
Conread position:
               
63-367
               

               
Cow position:
               
chr27:12246802-12246490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
64-265
               

               
Cow position:
               
chr27:27141736-27141542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
64-269
               

               
Cow position:
               
chr27:27259751-27259550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
64-328
               

               
Cow position:
               
chr27:16589570-16589824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
64-337
               

               
Cow position:
               
chr27:435378-435096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
64-358
               

               
Cow position:
               
chr27:26643821-26643536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
65-294
               

               
Cow position:
               
chr27:1675512-1675280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
65-316
               

               
Cow position:
               
chr27:2390436-2390182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 224
               

               
Conread position:
               
65-316
               

               
Cow position:
               
chr27:15644316-15644571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 225
               

               
Conread position:
               
65-333
               

               
Cow position:
               
chr27:8048595-8048868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 158
               

               
Conread position:
               
65-336
               

               
Cow position:
               
chr27:4805767-4806032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
65-370
               

               
Cow position:
               
chr27:17331644-17331331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 227
               

               
Conread position:
               
65-412
               

               
Cow position:
               
chr27:13005976-13005631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
93, 19
               

               
Conread position:
               
66-225
               

               
Cow position:
               
chr27:26885113-26885273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
20, 141
               

               
Conread position:
               
66-324
               

               
Cow position:
               
chr27:1141886-1142155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 242
               

               
Conread position:
               
66-324
               

               
Cow position:
               
chr27:19577815-19577558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
66-335
               

               
Cow position:
               
chr27:25676367-25676100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
66-336
               

               
Cow position:
               
chr27:26489761-26490039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 226
               

               
Conread position:
               
66-351
               

               
Cow position:
               
chr27:1498457-1498168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 18
               

               
Conread position:
               
66-361
               

               
Cow position:
               
chr27:19661085-19660775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 232
               

               
Conread position:
               
66-369
               

               
Cow position:
               
chr27:26440916-26441206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 147
               

               
Conread position:
               
66-377
               

               
Cow position:
               
chr27:26433671-26433978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
66-377
               

               
Cow position:
               
chr27:29381007-29380682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
66-378
               

               
Cow position:
               
chr27:23128598-23128280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
67-350
               

               
Cow position:
               
chr27:23554180-23554471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 161
               

               
Conread position:
               
67-368
               

               
Cow position:
               
chr27:18558503-18558197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 59
               

               
Conread position:
               
67-378
               

               
Cow position:
               
chr27:20369171-20368847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
69-324
               

               
Cow position:
               
chr27:20919030-20918773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
17, 137
               

               
Conread position:
               
69-333
               

               
Cow position:
               
chr27:25471277-25471012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
69-336
               

               
Cow position:
               
chr27:31251187-31251446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
70-331
               

               
Cow position:
               
chr27:19500092-19500359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
15, 157
               

               
Conread position:
               
70-379
               

               
Cow position:
               
chr27:20354721-20354414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
72-281
               

               
Cow position:
               
chr27:14701438-14701650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 164
               

               
Conread position:
               
72-334
               

               
Cow position:
               
chr27:27438366-27438634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
13, 155
               

               
Conread position:
               
73-263
               

               
Cow position:
               
chr27:25790942-25790746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
11, 150
               

               
Conread position:
               
74-336
               

               
Cow position:
               
chr27:26299975-26299712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 138
               

               
Conread position:
               
74-349
               

               
Cow position:
               
chr27:715639-715357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 132
               

               
Conread position:
               
74-356
               

               
Cow position:
               
chr27:2592679-2592390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
74-356
               

               
Cow position:
               
chr27:20067844-20068126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
76-254
               

               
Cow position:
               
chr27:22330534-22330722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
77-265
               

               
Cow position:
               
chr27:9697910-9697716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
77-323
               

               
Cow position:
               
chr27:25427771-25428025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
106, 8
               

               
Conread position:
               
77-336
               

               
Cow position:
               
chr27:6160113-6159850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
77-419
               

               
Cow position:
               
chr27:15319580-15319241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
8, 67
               

               
Conread position:
               
79-316
               

               
Cow position:
               
chr27:27442037-27442279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
13, 211
               

               
Conread position:
               
81-356
               

               
Cow position:
               
chr27:29236704-29236412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
104, 28
               

               
Conread position:
               
82-277
               

               
Cow position:
               
chr27:26141899-26141698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
56, 145
               

               
Conread position:
               
82-336
               

               
Cow position:
               
chr27:22603299-22603055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
14, 135
               

               
Conread position:
               
83-266
               

               
Cow position:
               
chr27:10395135-10395320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
83-276
               

               
Cow position:
               
chr27:7537950-7538148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
83-325
               

               
Cow position:
               
chr27:15272037-15271801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
59, 93
               

               
Conread position:
               
83-332
               

               
Cow position:
               
chr27:707077-706827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
102, 142
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr27:8168303-8168559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 144
               

               
Conread position:
               
83-336
               

               
Cow position:
               
chr27:16965714-16965446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 137
               

               
Conread position:
               
83-336
               

               
Cow position:
               
chr27:20641217-20641466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
244, 10
               

               
Conread position:
               
83-350
               

               
Cow position:
               
chr27:20549582-20549857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 206
               

               
Conread position:
               
83-351
               

               
Cow position:
               
chr27:21978011-21978285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
83-358
               

               
Cow position:
               
chr27:26999293-26999573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
83-364
               

               
Cow position:
               
chr27:20757921-20758189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
83-379
               

               
Cow position:
               
chr27:24342026-24341737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 105
               

               
Conread position:
               
84-414
               

               
Cow position:
               
chr27:27053418-27053085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
85-271
               

               
Cow position:
               
chr27:20570246-20570053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
48, 141
               

               
Conread position:
               
85-366
               

               
Cow position:
               
chr27:1353714-1353421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 211
               

               
Conread position:
               
85-379
               

               
Cow position:
               
chr27:20748886-20749188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
86-336
               

               
Cow position:
               
chr27:14937298-14937560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
7, 224
               

               
Conread position:
               
87-216
               

               
Cow position:
               
chr27:23455028-23455169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
87-325
               

               
Cow position:
               
chr27:15871285-15871042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
52, 128
               

               
Conread position:
               
88-370
               

               
Cow position:
               
chr27:22569893-22569617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 119
               

               
Conread position:
               
89-334
               

               
Cow position:
               
chr27:30260775-30261021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
91-277
               

               
Cow position:
               
chr27:11416567-11416376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 48
               

               
Conread position:
               
91-310
               

               
Cow position:
               
chr27:30804457-30804239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
95, 10
               

               
Conread position:
               
91-334
               

               
Cow position:
               
chr27:20901680-20901432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
46, 97
               

               
Conread position:
               
91-379
               

               
Cow position:
               
chr27:20283757-20283458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
92-266
               

               
Cow position:
               
chr27:8291888-8292062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
92-324
               

               
Cow position:
               
chr27:11273692-11273458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
92-325
               

               
Cow position:
               
chr27:20101485-20101251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
92-334
               

               
Cow position:
               
chr27:15925462-15925217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 131
               

               
Conread position:
               
92-336
               

               
Cow position:
               
chr27:25809397-25809646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
18, 142
               

               
Conread position:
               
93-229
               

               
Cow position:
               
chr27:30856274-30856408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
93-252
               

               
Cow position:
               
chr27:30843959-30844125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
93-268
               

               
Cow position:
               
chr27:16275558-16275725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
93-284
               

               
Cow position:
               
chr27:20765845-20766039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
68, 62
               

               
Conread position:
               
93-310
               

               
Cow position:
               
chr27:20789261-20789483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 195
               

               
Conread position:
               
93-326
               

               
Cow position:
               
chr27:18569575-18569349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 46
               

               
Conread position:
               
93-331
               

               
Cow position:
               
chr27:7614972-7615206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
49, 132
               

               
Conread position:
               
93-334
               

               
Cow position:
               
chr27:27554567-27554806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
93-336
               

               
Cow position:
               
chr27:8405720-8405953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
93-336
               

               
Cow position:
               
chr27:12596881-12596646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
92, 121
               

               
Conread position:
               
93-351
               

               
Cow position:
               
chr27:20629157-20628922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
236, 14
               

               
Conread position:
               
93-352
               

               
Cow position:
               
chr27:26919786-26920058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
48, 204
               

               
Conread position:
               
93-354
               

               
Cow position:
               
chr27:1768511-1768773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 42
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr27:16103920-16103660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr27:20795903-20795641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 190
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr27:27038723-27038989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 143
               

               
Conread position:
               
93-362
               

               
Cow position:
               
chr27:11435208-11435476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
93-364
               

               
Cow position:
               
chr27:30389180-30389457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
93-368
               

               
Cow position:
               
chr27:27204301-27204593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 236
               

               
Conread position:
               
93-379
               

               
Cow position:
               
chr27:19647823-19648110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
93, 177
               

               
Conread position:
               
93-419
               

               
Cow position:
               
chr27:4664586-4664274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
120, 20
               

               
Conread position:
               
93-420
               

               
Cow position:
               
chr27:29038828-29039166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
94-265
               

               
Cow position:
               
chr27:16238020-16237849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
94-325
               

               
Cow position:
               
chr27:20078982-20078749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 121
               

               
Conread position:
               
94-356
               

               
Cow position:
               
chr27:26506835-26506593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
235, 12
               

               
Conread position:
               
95-228
               

               
Cow position:
               
chr27:27003162-27003298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
95-285
               

               
Cow position:
               
chr27:6350715-6350919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
54, 200
               

               
Conread position:
               
95-329
               

               
Cow position:
               
chr27:19543791-19544043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 208
               

               
Conread position:
               
95-333
               

               
Cow position:
               
chr27:30672449-30672686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
41, 133
               

               
Conread position:
               
95-334
               

               
Cow position:
               
chr27:20046000-20045766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
95-334
               

               
Cow position:
               
chr27:29184725-29184966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
95-336
               

               
Cow position:
               
chr27:16626010-16625769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
86, 5
               

               
Conread position:
               
95-336
               

               
Cow position:
               
chr27:22423612-22423385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
235, 47
               

               
Conread position:
               
95-348
               

               
Cow position:
               
chr27:27136405-27136664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
83, 119
               

               
Conread position:
               
95-350
               

               
Cow position:
               
chr27:27388910-27389169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr27:20552646-20552933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr27:21213885-21213636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
77, 89
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr27:23545206-23545482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
46, 114
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr27:30359518-30359255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 45
               

               
Conread position:
               
95-370
               

               
Cow position:
               
chr27:28245915-28245638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 131
               

               
Conread position:
               
95-377
               

               
Cow position:
               
chr27:22454663-22454951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 126
               

               
Conread position:
               
97-255
               

               
Cow position:
               
chr27:22154169-22154007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
97-335
               

               
Cow position:
               
chr27:15867510-15867260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
45, 124
               

               
Conread position:
               
97-347
               

               
Cow position:
               
chr27:4829691-4829950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
97-356
               

               
Cow position:
               
chr27:26226178-26226441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
97-364
               

               
Cow position:
               
chr27:24371347-24371083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
77, 120
               

               
Conread position:
               
97-367
               

               
Cow position:
               
chr27:26581323-26581599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
83, 131
               

               
Conread position:
               
98-320
               

               
Cow position:
               
chr27:11151787-11151555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 198
               

               
Conread position:
               
98-368
               

               
Cow position:
               
chr27:31148871-31148596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
99-354
               

               
Cow position:
               
chr27:27694662-27694918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
102-379
               

               
Cow position:
               
chr27:1636836-1637112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
103-336
               

               
Cow position:
               
chr27:12191383-12191609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
39, 101
               

               
Conread position:
               
103-349
               

               
Cow position:
               
chr27:8263229-8263481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
103-356
               

               
Cow position:
               
chr27:23594422-23594170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
226, 117
               

               
Conread position:
               
103-364
               

               
Cow position:
               
chr27:4858540-4858796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 77
               

               
Conread position:
               
105-357
               

               
Cow position:
               
chr27:20497318-20497053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
105-377
               

               
Cow position:
               
chr27:22386974-22386704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 154
               

               
Conread position:
               
105-416
               

               
Cow position:
               
chr27:29504543-29504871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
81, 42
               

               
Conread position:
               
109-329
               

               
Cow position:
               
chr27:26135237-26135024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 8
               

               
Conread position:
               
110-377
               

               
Cow position:
               
chr27:590666-590934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
13, 6
               

               
Conread position:
               
111-357
               

               
Cow position:
               
chr27:20656536-20656771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
111-418
               

               
Cow position:
               
chr27:20481279-20481570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
47, 84
               

               
Conread position:
               
113-360
               

               
Cow position:
               
chr27:20092742-20092990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
98, 51
               

               
Conread position:
               
114-258
               

               
Cow position:
               
chr27:4482762-4482909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
114-277
               

               
Cow position:
               
chr27:20635262-20635105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
114-305
               

               
Cow position:
               
chr27:23736057-23735863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 99
               

               
Conread position:
               
114-370
               

               
Cow position:
               
chr27:22559726-22559989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
22, 175
               

               
Conread position:
               
114-377
               

               
Cow position:
               
chr27:7935060-7935330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
114-398
               

               
Cow position:
               
chr27:24940005-24939697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
22, 274
               

               
Conread position:
               
114-413
               

               
Cow position:
               
chr27:673949-674233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 100
               

               
Conread position:
               
115-370
               

               
Cow position:
               
chr27:23511084-23510812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
68, 176
               

               
Conread position:
               
116-272
               

               
Cow position:
               
chr27:31159897-31159733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
116-356
               

               
Cow position:
               
chr27:26188915-26188678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
116-414
               

               
Cow position:
               
chr27:24509910-24509605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
119-356
               

               
Cow position:
               
chr27:30814504-30814263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
47, 171
               

               
Conread position:
               
121-336
               

               
Cow position:
               
chr27:30365400-30365188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
43, 22
               

               
Conread position:
               
125-334
               

               
Cow position:
               
chr27:26347534-26347741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
127-336
               

               
Cow position:
               
chr27:13607600-13607806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
127-349
               

               
Cow position:
               
chr27:15378396-15378619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 158
               

               
Conread position:
               
128-355
               

               
Cow position:
               
chr27:24738710-24738950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 167
               

               
Conread position:
               
130-276
               

               
Cow position:
               
chr27:18491927-18491769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
131-364
               

               
Cow position:
               
chr27:19083641-19083870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
131-370
               

               
Cow position:
               
chr27:6925167-6924917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
54, 161
               

               
Conread position:
               
131-385
               

               
Cow position:
               
chr27:24440150-24440402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
135-269
               

               
Cow position:
               
chr27:1565352-1565490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
135-284
               

               
Cow position:
               
chr27:26979634-26979791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
135-327
               

               
Cow position:
               
chr27:15215307-15215109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
50, 124
               

               
Conread position:
               
135-329
               

               
Cow position:
               
chr27:8942609-8942812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 90
               

               
Conread position:
               
135-337
               

               
Cow position:
               
chr27:16088883-16088672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
51, 158
               

               
Conread position:
               
138-335
               

               
Cow position:
               
chr27:26013303-26013505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 109
               

               
Conread position:
               
139-315
               

               
Cow position:
               
chr27:2901196-2901372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
140-419
               

               
Cow position:
               
chr27:22225526-22225813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
141-317
               

               
Cow position:
               
chr27:20085632-20085451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 83
               

               
Conread position:
               
141-336
               

               
Cow position:
               
chr27:20514889-20514692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
38, 144
               

               
Conread position:
               
141-336
               

               
Cow position:
               
chr27:26111841-26112046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
44, 153
               

               
Conread position:
               
141-356
               

               
Cow position:
               
chr27:20337180-20336950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 134
               

               
Conread position:
               
143-334
               

               
Cow position:
               
chr27:21453035-21453223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
185, 36
               

               
Conread position:
               
143-351
               

               
Cow position:
               
chr27:26407099-26407306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 68
               

               
Conread position:
               
144-325
               

               
Cow position:
               
chr27:13869683-13869504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
145-336
               

               
Cow position:
               
chr27:22489342-22489146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 64
               

               
Conread position:
               
145-337
               

               
Cow position:
               
chr27:29593569-29593760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
145-356
               

               
Cow position:
               
chr27:7974238-7974025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 86
               

               
Conread position:
               
145-356
               

               
Cow position:
               
chr27:20517718-20517512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
12, 53
               

               
Conread position:
               
145-364
               

               
Cow position:
               
chr27:26785926-26786150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
146-351
               

               
Cow position:
               
chr27:15343223-15343421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 41
               

               
Conread position:
               
146-370
               

               
Cow position:
               
chr27:31017771-31017989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
147-340
               

               
Cow position:
               
chr27:21976111-21975920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
43, 76
               

               
Conread position:
               
147-351
               

               
Cow position:
               
chr27:23559974-23560178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
182, 60
               

               
Conread position:
               
147-356
               

               
Cow position:
               
chr27:28260477-28260687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
147-364
               

               
Cow position:
               
chr27:23876777-23877018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
11, 154
               

               
Conread position:
               
147-379
               

               
Cow position:
               
chr27:17646111-17646343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 33
               

               
Conread position:
               
147-379
               

               
Cow position:
               
chr27:20812967-20812730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
148-355
               

               
Cow position:
               
chr27:6302398-6302618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
16, 149
               

               
Conread position:
               
151-334
               

               
Cow position:
               
chr27:4156060-4155867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 143
               

               
Conread position:
               
151-368
               

               
Cow position:
               
chr27:6015258-6015039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
152-379
               

               
Cow position:
               
chr27:25152135-25151903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
154-284
               

               
Cow position:
               
chr27:24113257-24113119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
156-351
               

               
Cow position:
               
chr27:14303781-14303591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
114, 52
               

               
Conread position:
               
157-276
               

               
Cow position:
               
chr27:4486572-4486696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
157-356
               

               
Cow position:
               
chr27:23860221-23860014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 135
               

               
Conread position:
               
160-336
               

               
Cow position:
               
chr27:15865660-15865476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 133
               

               
Conread position:
               
161-356
               

               
Cow position:
               
chr27:4720070-4720264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
69, 124
               

               
Conread position:
               
163-336
               

               
Cow position:
               
chr27:213004-212825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
50, 105
               

               
Conread position:
               
163-364
               

               
Cow position:
               
chr27:2847893-2847695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
167, 38
               

               
Conread position:
               
164-282
               

               
Cow position:
               
chr27:19774050-19773933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
164-356
               

               
Cow position:
               
chr27:5553510-5553318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
164-356
               

               
Cow position:
               
chr27:23485252-23485061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 122
               

               
Conread position:
               
164-371
               

               
Cow position:
               
chr27:17918276-17918480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
166, 57
               

               
Conread position:
               
164-376
               

               
Cow position:
               
chr27:20803618-20803832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
164, 125
               

               
Conread position:
               
165-370
               

               
Cow position:
               
chr27:23107863-23108065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
59, 101
               

               
Conread position:
               
167-378
               

               
Cow position:
               
chr27:29841695-29841906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
161, 52
               

               
Conread position:
               
169-356
               

               
Cow position:
               
chr27:12459321-12459137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
170-336
               

               
Cow position:
               
chr27:31386603-31386762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
170-380
               

               
Cow position:
               
chr27:13940520-13940735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
172-325
               

               
Cow position:
               
chr27:6290501-6290355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
179-325
               

               
Cow position:
               
chr27:2885808-2885951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
179-336
               

               
Cow position:
               
chr27:19933089-19932938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
149, 71
               

               
Conread position:
               
179-348
               

               
Cow position:
               
chr27:18767038-18767205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
150, 68
               

               
Conread position:
               
179-354
               

               
Cow position:
               
chr27:18922806-18922982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
42, 106
               

               
Conread position:
               
180-325
               

               
Cow position:
               
chr27:21130332-21130187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
180-419
               

               
Cow position:
               
chr27:11356516-11356756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 96
               

               
Conread position:
               
182-334
               

               
Cow position:
               
chr27:20584436-20584583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
182-348
               

               
Cow position:
               
chr27:26793767-26793926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
182-397
               

               
Cow position:
               
chr27:10653707-10653494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
151, 42
               

               
Conread position:
               
183-336
               

               
Cow position:
               
chr27:11561796-11561645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
144, 36
               

               
Conread position:
               
183-340
               

               
Cow position:
               
chr27:28472803-28472645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
91, 80
               

               
Conread position:
               
183-379
               

               
Cow position:
               
chr27:14269321-14269515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
170, 101
               

               
Conread position:
               
185-364
               

               
Cow position:
               
chr27:237288-237110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
142, 28
               

               
Conread position:
               
187-335
               

               
Cow position:
               
chr27:26915409-26915563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
188-356
               

               
Cow position:
               
chr27:19509030-19508861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
141, 96
               

               
Conread position:
               
190-336
               

               
Cow position:
               
chr27:26437105-26437252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
190-356
               

               
Cow position:
               
chr27:1789123-1789290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
192-378
               

               
Cow position:
               
chr27:31210559-31210365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
138, 51
               

               
Conread position:
               
206-356
               

               
Cow position:
               
chr27:27055285-27055137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
121, 78
               

               
Conread position:
               
211-336
               

               
Cow position:
               
chr27:24303939-24303816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
117, 14
               

               
Conread position:
               
211-356
               

               
Cow position:
               
chr27:8790747-8790895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
211-384
               

               
Cow position:
               
chr27:27673023-27673198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
117, 14
               

               
Conread position:
               
213-335
               

               
Cow position:
               
chr27:30455986-30455864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 72
               

               
Conread position:
               
213-360
               

               
Cow position:
               
chr27:23148158-23148012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
115, 72
               

               
Conread position:
               
213-395
               

               
Cow position:
               
chr27:6241199-6241385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
15, 72
               

               
Conread position:
               
214-382
               

               
Cow position:
               
chr27:6319910-6319740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
114, 70
               

               
Conread position:
               
215-349
               

               
Cow position:
               
chr27:9977675-9977539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
217-356
               

               
Cow position:
               
chr27:30489422-30489562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
112, 67
               

               
Conread position:
               
218-361
               

               
Cow position:
               
chr27:7343441-7343585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 66
               

               
Conread position:
               
218-370
               

               
Cow position:
               
chr27:12710236-12710071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
84, 66
               

               
Conread position:
               
220-329
               

               
Cow position:
               
chr27:29319396-29319288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
220-335
               

               
Cow position:
               
chr27:22245611-22245498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 75
               

               
Conread position:
               
220-341
               

               
Cow position:
               
chr27:788812-788933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
109, 66
               

               
Conread position:
               
220-368
               

               
Cow position:
               
chr27:26090326-26090474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
110, 64
               

               
Conread position:
               
221-379
               

               
Cow position:
               
chr27:18435148-18435316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 64
               

               
Conread position:
               
225-368
               

               
Cow position:
               
chr27:30908652-30908508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
103, 59
               

               
Conread position:
               
238-360
               

               
Cow position:
               
chr27:11466498-11466620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
91, 46
               

               
Conread position:
               
238-373
               

               
Cow position:
               
chr27:19452969-19452833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
92, 46
               

               
Conread position:
               
238-379
               

               
Cow position:
               
chr27:6162443-6162589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
89, 56
               

               
Conread position:
               
243-370
               

               
Cow position:
               
chr27:17102858-17102731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
248-416
               

               
Cow position:
               
chr27:19741451-19741632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 37
               
Show alignments to all cow chromosomes.