Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rmgp012_h16.5
        

               Conread position:
               11-325
               

               Cow position:
               chr29:5109449-5109111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               75, 15
               

               Conread position:
               23-316
               

               Cow position:
               chr29:27652854-27652564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               94, 24
               

               Conread position:
               27-304
               

               Cow position:
               chr29:4805013-4805279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               59, 25
               

               Conread position:
               30-245
               

               Cow position:
               chr29:35636207-35636426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               114, 25
               

               Conread position:
               32-379
               

               Cow position:
               chr29:28195735-28195392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 23
               

               Conread position:
               35-175
               

               Cow position:
               chr29:13458843-13458980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               101, 20
               

               Conread position:
               35-269
               

               Cow position:
               chr29:35738485-35738254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               35-310
               

               Cow position:
               chr29:18212198-18211940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               107, 20
               

               Conread position:
               35-325
               

               Cow position:
               chr29:465617-465326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               50, 190
               

               Conread position:
               35-327
               

               Cow position:
               chr29:14615475-14615188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               102, 10
               

               Conread position:
               35-327
               

               Cow position:
               chr29:40166027-40166319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               35-336
               

               Cow position:
               chr29:94764-94484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               105, 10
               

               Conread position:
               35-351
               

               Cow position:
               chr29:5098977-5098665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               35-356
               

               Cow position:
               chr29:22175475-22175787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               240
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               150, 20
               

               Conread position:
               35-365
               

               Cow position:
               chr29:356111-356436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 20
               

               Conread position:
               35-372
               

               Cow position:
               chr29:39567472-39567806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 18
               

               Conread position:
               35-379
               

               Cow position:
               chr29:26778669-26779017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               36-316
               

               Cow position:
               chr29:406479-406202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 17
               

               Conread position:
               36-316
               

               Cow position:
               chr29:25926768-25926485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               36-317
               

               Cow position:
               chr29:7811180-7810896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               48, 17
               

               Conread position:
               39-184
               

               Cow position:
               chr29:26508272-26508423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 40
               

               Conread position:
               41-316
               

               Cow position:
               chr29:10627839-10627559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 247
               

               Conread position:
               41-336
               

               Cow position:
               chr29:41364900-41365194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 14
               

               Conread position:
               41-368
               

               Cow position:
               chr29:22613217-22613545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 36
               

               Conread position:
               42-369
               

               Cow position:
               chr29:32211270-32210952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 169
               

               Conread position:
               43-258
               

               Cow position:
               chr29:23710294-23710500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               39, 12
               

               Conread position:
               43-347
               

               Cow position:
               chr29:19907147-19907448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               42, 51
               

               Conread position:
               44-273
               

               Cow position:
               chr29:32767729-32767510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 51
               

               Conread position:
               45-282
               

               Cow position:
               chr29:14036917-14036691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               132, 39
               

               Conread position:
               45-307
               

               Cow position:
               chr29:22585614-22585346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               40, 55
               

               Conread position:
               45-310
               

               Cow position:
               chr29:24080255-24079983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               39, 163
               

               Conread position:
               45-315
               

               Cow position:
               chr29:16617422-16617696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               37, 166
               

               Conread position:
               45-336
               

               Cow position:
               chr29:9195330-9195032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               40, 236
               

               Conread position:
               45-336
               

               Cow position:
               chr29:18574878-18575177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               40, 112
               

               Conread position:
               45-368
               

               Cow position:
               chr29:1022084-1022419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               45-379
               

               Cow position:
               chr29:35501855-35501522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 40
               

               Conread position:
               46-303
               

               Cow position:
               chr29:11136093-11135845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               47-221
               

               Cow position:
               chr29:21236913-21237089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               134, 8
               

               Conread position:
               47-265
               

               Cow position:
               chr29:26734829-26735043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               141, 37
               

               Conread position:
               47-316
               

               Cow position:
               chr29:27009215-27009480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               38, 12
               

               Conread position:
               48-170
               

               Cow position:
               chr29:40902923-40902804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               48-241
               

               Cow position:
               chr29:2415020-2414820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               38, 60
               

               Conread position:
               48-271
               

               Cow position:
               chr29:18748790-18748582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               37, 127
               

               Conread position:
               48-283
               

               Cow position:
               chr29:3368672-3368424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               36, 179
               

               Conread position:
               48-318
               

               Cow position:
               chr29:2071772-2071505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 43
               

               Conread position:
               48-336
               

               Cow position:
               chr29:12784158-12783879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 37
               

               Conread position:
               48-349
               

               Cow position:
               chr29:477899-478203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               37, 246
               

               Conread position:
               48-356
               

               Cow position:
               chr29:36209961-36210244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               281, 36
               

               Conread position:
               48-368
               

               Cow position:
               chr29:22714931-22714606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 164
               

               Conread position:
               48-374
               

               Cow position:
               chr29:25474704-25475047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 253
               

               Conread position:
               48-377
               

               Cow position:
               chr29:732414-732742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 81
               

               Conread position:
               48-379
               

               Cow position:
               chr29:32655629-32655313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               49-334
               

               Cow position:
               chr29:38581766-38582051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               36, 7
               

               Conread position:
               49-376
               

               Cow position:
               chr29:3711184-3711514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               51-316
               

               Cow position:
               chr29:1307064-1306796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               88, 31
               

               Conread position:
               51-336
               

               Cow position:
               chr29:16609537-16609833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 245
               

               Conread position:
               51-355
               

               Cow position:
               chr29:25091909-25092211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               51-370
               

               Cow position:
               chr29:10818637-10818330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               35, 45
               

               Conread position:
               52-255
               

               Cow position:
               chr29:40763884-40763676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               33, 108
               

               Conread position:
               52-256
               

               Cow position:
               chr29:16756855-16757060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               33, 169
               

               Conread position:
               52-265
               

               Cow position:
               chr29:479187-479398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               33, 83
               

               Conread position:
               52-276
               

               Cow position:
               chr29:2532862-2533084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               33, 163
               

               Conread position:
               52-284
               

               Cow position:
               chr29:8190661-8190429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               52-310
               

               Cow position:
               chr29:24119936-24119684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               33, 58
               

               Conread position:
               52-317
               

               Cow position:
               chr29:9718972-9718707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 113
               

               Conread position:
               52-325
               

               Cow position:
               chr29:23844632-23844911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               34, 163
               

               Conread position:
               52-327
               

               Cow position:
               chr29:23577975-23577713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               52-328
               

               Cow position:
               chr29:21933312-21933045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               87, 33
               

               Conread position:
               52-331
               

               Cow position:
               chr29:20626377-20626647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               85, 29
               

               Conread position:
               52-337
               

               Cow position:
               chr29:17965766-17966050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               85, 32
               

               Conread position:
               52-337
               

               Cow position:
               chr29:24624048-24624334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 79
               

               Conread position:
               52-337
               

               Cow position:
               chr29:36530664-36530953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 161
               

               Conread position:
               52-346
               

               Cow position:
               chr29:650075-650371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               33, 188
               

               Conread position:
               52-348
               

               Cow position:
               chr29:35677744-35677444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               87, 33
               

               Conread position:
               52-349
               

               Cow position:
               chr29:24604350-24604041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               33, 183
               

               Conread position:
               52-351
               

               Cow position:
               chr29:26017713-26017401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               33, 175
               

               Conread position:
               52-352
               

               Cow position:
               chr29:28868433-28868745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               52-355
               

               Cow position:
               chr29:4480375-4480068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 160
               

               Conread position:
               52-356
               

               Cow position:
               chr29:25737615-25737308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 33
               

               Conread position:
               52-356
               

               Cow position:
               chr29:40117369-40117677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 68
               

               Conread position:
               52-358
               

               Cow position:
               chr29:17222209-17222522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 175
               

               Conread position:
               52-368
               

               Cow position:
               chr29:4875102-4874762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               248
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               21, 256
               

               Conread position:
               52-368
               

               Cow position:
               chr29:8926658-8926343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 83
               

               Conread position:
               52-371
               

               Cow position:
               chr29:463853-463532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 45
               

               Conread position:
               52-374
               

               Cow position:
               chr29:19762073-19762394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 154
               

               Conread position:
               52-377
               

               Cow position:
               chr29:37961177-37960856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               111, 33
               

               Conread position:
               52-379
               

               Cow position:
               chr29:109510-109821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               242
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               278, 33
               

               Conread position:
               52-379
               

               Cow position:
               chr29:40891901-40891563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               248
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               32, 177
               

               Conread position:
               52-382
               

               Cow position:
               chr29:6286357-6286031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               52-385
               

               Cow position:
               chr29:1325238-1325573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 88
               

               Conread position:
               55-309
               

               Cow position:
               chr29:24659297-24659041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 45
               

               Conread position:
               55-327
               

               Cow position:
               chr29:6925823-6926080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               130, 29
               

               Conread position:
               55-336
               

               Cow position:
               chr29:11562418-11562698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               55-349
               

               Cow position:
               chr29:5520715-5520387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               242
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               30, 55
               

               Conread position:
               56-370
               

               Cow position:
               chr29:11646908-11647214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 29
               

               Conread position:
               57-228
               

               Cow position:
               chr29:29548049-29548222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               124, 16
               

               Conread position:
               57-336
               

               Cow position:
               chr29:26290777-26290502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               28, 105
               

               Conread position:
               57-370
               

               Cow position:
               chr29:26991045-26991362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               27, 45
               

               Conread position:
               58-175
               

               Cow position:
               chr29:23155057-23155172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 99
               

               Conread position:
               58-222
               

               Cow position:
               chr29:45650537-45650369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 26
               

               Conread position:
               58-247
               

               Cow position:
               chr29:5677591-5677785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               26, 154
               

               Conread position:
               58-262
               

               Cow position:
               chr29:7041032-7040837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               27, 63
               

               Conread position:
               58-263
               

               Cow position:
               chr29:23119574-23119357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               58-265
               

               Cow position:
               chr29:4327298-4327506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               79, 27
               

               Conread position:
               58-268
               

               Cow position:
               chr29:4328240-4328435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               58-272
               

               Cow position:
               chr29:20178318-20178113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 50
               

               Conread position:
               58-278
               

               Cow position:
               chr29:9686194-9685980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               123, 21
               

               Conread position:
               58-279
               

               Cow position:
               chr29:39642983-39643204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 39
               

               Conread position:
               58-282
               

               Cow position:
               chr29:12004958-12004731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 43
               

               Conread position:
               58-283
               

               Cow position:
               chr29:26042435-26042660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               78, 26
               

               Conread position:
               58-283
               

               Cow position:
               chr29:44384394-44384161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 147
               

               Conread position:
               58-299
               

               Cow position:
               chr29:699809-699568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               58-302
               

               Cow position:
               chr29:28194786-28194532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               58-302
               

               Cow position:
               chr29:41747247-41747498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               78, 27
               

               Conread position:
               58-303
               

               Cow position:
               chr29:19792474-19792225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               26, 147
               

               Conread position:
               58-309
               

               Cow position:
               chr29:17131801-17131562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               27, 43
               

               Conread position:
               58-310
               

               Cow position:
               chr29:3704397-3704140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               26, 40
               

               Conread position:
               58-313
               

               Cow position:
               chr29:35405987-35405731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               79, 25
               

               Conread position:
               58-316
               

               Cow position:
               chr29:40656500-40656761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               27, 231
               

               Conread position:
               58-319
               

               Cow position:
               chr29:34744810-34744558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               83, 30
               

               Conread position:
               58-319
               

               Cow position:
               chr29:35485051-35485313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               29, 51
               

               Conread position:
               58-323
               

               Cow position:
               chr29:22690026-22690296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 166
               

               Conread position:
               58-323
               

               Cow position:
               chr29:31786485-31786746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               119, 19
               

               Conread position:
               58-325
               

               Cow position:
               chr29:14501397-14501666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 151
               

               Conread position:
               58-325
               

               Cow position:
               chr29:15738538-15738267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               58-325
               

               Cow position:
               chr29:20673998-20673737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               27, 44
               

               Conread position:
               58-325
               

               Cow position:
               chr29:25267922-25268209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               25, 248
               

               Conread position:
               58-325
               

               Cow position:
               chr29:26269874-26270140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               58-325
               

               Cow position:
               chr29:29974847-29975111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 90
               

               Conread position:
               58-326
               

               Cow position:
               chr29:22778375-22778102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 169
               

               Conread position:
               58-327
               

               Cow position:
               chr29:3100455-3100192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               27, 156
               

               Conread position:
               58-327
               

               Cow position:
               chr29:24103742-24103466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 214
               

               Conread position:
               58-329
               

               Cow position:
               chr29:40852739-40853005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 99
               

               Conread position:
               58-331
               

               Cow position:
               chr29:3726842-3727110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               79, 27
               

               Conread position:
               58-331
               

               Cow position:
               chr29:20933512-20933793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               26, 128
               

               Conread position:
               58-332
               

               Cow position:
               chr29:17409137-17409416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 50
               

               Conread position:
               58-335
               

               Cow position:
               chr29:868579-868859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 50
               

               Conread position:
               58-335
               

               Cow position:
               chr29:10153983-10153712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               78, 27
               

               Conread position:
               58-336
               

               Cow position:
               chr29:709316-709048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               105, 26
               

               Conread position:
               58-336
               

               Cow position:
               chr29:14034520-14034243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 36
               

               Conread position:
               58-336
               

               Cow position:
               chr29:23697785-23698063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               80, 27
               

               Conread position:
               58-336
               

               Cow position:
               chr29:25088560-25088828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 26
               

               Conread position:
               58-336
               

               Cow position:
               chr29:29056987-29057260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 43
               

               Conread position:
               58-337
               

               Cow position:
               chr29:17607223-17607502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 228
               

               Conread position:
               58-341
               

               Cow position:
               chr29:32521675-32521960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               28, 84
               

               Conread position:
               58-349
               

               Cow position:
               chr29:6635911-6636179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               84, 26
               

               Conread position:
               58-351
               

               Cow position:
               chr29:4120652-4120955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 26
               

               Conread position:
               58-351
               

               Cow position:
               chr29:13372470-13372764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 36
               

               Conread position:
               58-351
               

               Cow position:
               chr29:28775648-28775362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               27, 41
               

               Conread position:
               58-355
               

               Cow position:
               chr29:28446453-28446151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               27, 206
               

               Conread position:
               58-356
               

               Cow position:
               chr29:5892653-5892951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 64
               

               Conread position:
               58-356
               

               Cow position:
               chr29:6844823-6844526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 29
               

               Conread position:
               58-356
               

               Cow position:
               chr29:7966052-7966352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               28, 47
               

               Conread position:
               58-356
               

               Cow position:
               chr29:19338786-19339107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               27, 87
               

               Conread position:
               58-356
               

               Cow position:
               chr29:19949116-19949413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 79
               

               Conread position:
               58-356
               

               Cow position:
               chr29:36216924-36217218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 36
               

               Conread position:
               58-356
               

               Cow position:
               chr29:40096763-40097068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 110
               

               Conread position:
               58-356
               

               Cow position:
               chr29:41530656-41530955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 27
               

               Conread position:
               58-363
               

               Cow position:
               chr29:12679961-12680269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 152
               

               Conread position:
               58-363
               

               Cow position:
               chr29:24952491-24952798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 167
               

               Conread position:
               58-367
               

               Cow position:
               chr29:750100-749790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               58-368
               

               Cow position:
               chr29:11433929-11434237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 27
               

               Conread position:
               58-368
               

               Cow position:
               chr29:11915623-11915938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 89
               

               Conread position:
               58-368
               

               Cow position:
               chr29:26985031-26985341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               27, 229
               

               Conread position:
               58-370
               

               Cow position:
               chr29:2744465-2744149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 27
               

               Conread position:
               58-370
               

               Cow position:
               chr29:4520142-4520456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 27
               

               Conread position:
               58-375
               

               Cow position:
               chr29:16195659-16195963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 27
               

               Conread position:
               58-376
               

               Cow position:
               chr29:32963361-32963665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 86
               

               Conread position:
               58-377
               

               Cow position:
               chr29:2623673-2623341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               27, 148
               

               Conread position:
               58-378
               

               Cow position:
               chr29:10456746-10456440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               128, 26
               

               Conread position:
               58-379
               

               Cow position:
               chr29:707139-706825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               71, 26
               

               Conread position:
               58-379
               

               Cow position:
               chr29:28197201-28196878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 48
               

               Conread position:
               58-379
               

               Cow position:
               chr29:28979673-28979372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 27
               

               Conread position:
               58-379
               

               Cow position:
               chr29:37599398-37599093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               84, 27
               

               Conread position:
               58-403
               

               Cow position:
               chr29:6337469-6337816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 27
               

               Conread position:
               58-412
               

               Cow position:
               chr29:2644501-2644129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               30, 10
               

               Conread position:
               58-416
               

               Cow position:
               chr29:1229415-1229766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               58-416
               

               Cow position:
               chr29:26615918-26615545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 38
               

               Conread position:
               58-419
               

               Cow position:
               chr29:11054047-11053695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 8
               

               Conread position:
               58-419
               

               Cow position:
               chr29:31926484-31926122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               28, 50
               

               Conread position:
               59-178
               

               Cow position:
               chr29:686384-686262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               59-211
               

               Cow position:
               chr29:21000447-21000606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               59-271
               

               Cow position:
               chr29:44901898-44901684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               25, 48
               

               Conread position:
               59-273
               

               Cow position:
               chr29:3502865-3503078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               121, 25
               

               Conread position:
               59-302
               

               Cow position:
               chr29:28689418-28689664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               26, 149
               

               Conread position:
               59-334
               

               Cow position:
               chr29:31489127-31489402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               127, 24
               

               Conread position:
               59-335
               

               Cow position:
               chr29:26298786-26299053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               26, 104
               

               Conread position:
               59-336
               

               Cow position:
               chr29:30188533-30188267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               25, 49
               

               Conread position:
               59-336
               

               Cow position:
               chr29:43251356-43251082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               126, 22
               

               Conread position:
               59-342
               

               Cow position:
               chr29:15940829-15940539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               26, 81
               

               Conread position:
               59-351
               

               Cow position:
               chr29:43495867-43496141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               27, 44
               

               Conread position:
               59-355
               

               Cow position:
               chr29:26275421-26275711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               27, 74
               

               Conread position:
               59-356
               

               Cow position:
               chr29:9709506-9709801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 19
               

               Conread position:
               59-356
               

               Cow position:
               chr29:10838758-10839047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               220, 26
               

               Conread position:
               59-356
               

               Cow position:
               chr29:17109779-17110063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               218
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               269, 26
               

               Conread position:
               59-356
               

               Cow position:
               chr29:18878693-18878375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               82, 26
               

               Conread position:
               59-371
               

               Cow position:
               chr29:11704930-11705231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               26, 32
               

               Conread position:
               59-372
               

               Cow position:
               chr29:43328446-43328767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               59-379
               

               Cow position:
               chr29:6293672-6293350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 169
               

               Conread position:
               59-383
               

               Cow position:
               chr29:6870977-6870638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               26, 43
               

               Conread position:
               60-262
               

               Cow position:
               chr29:456988-456777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               10, 19
               

               Conread position:
               62-191
               

               Cow position:
               chr29:4691871-4691742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               62-222
               

               Cow position:
               chr29:19125154-19125317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               118, 20
               

               Conread position:
               62-248
               

               Cow position:
               chr29:8125784-8125591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               62-260
               

               Cow position:
               chr29:4194312-4194097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               23, 58
               

               Conread position:
               62-273
               

               Cow position:
               chr29:6775174-6774973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               62-275
               

               Cow position:
               chr29:42886191-42886415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 176
               

               Conread position:
               62-292
               

               Cow position:
               chr29:14484735-14484496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               62-307
               

               Cow position:
               chr29:43956704-43956947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               124, 20
               

               Conread position:
               62-318
               

               Cow position:
               chr29:36183084-36183347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               23, 46
               

               Conread position:
               62-319
               

               Cow position:
               chr29:27833798-27834055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 45
               

               Conread position:
               62-323
               

               Cow position:
               chr29:14112181-14112456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               22, 83
               

               Conread position:
               62-325
               

               Cow position:
               chr29:27618688-27618952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               22, 100
               

               Conread position:
               62-325
               

               Cow position:
               chr29:28883891-28884154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               75, 160
               

               Conread position:
               62-329
               

               Cow position:
               chr29:27858602-27858864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               62-334
               

               Cow position:
               chr29:17668306-17668568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 77
               

               Conread position:
               62-334
               

               Cow position:
               chr29:24292681-24292951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               22, 31
               

               Conread position:
               62-335
               

               Cow position:
               chr29:26317667-26317936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               129, 23
               

               Conread position:
               62-335
               

               Cow position:
               chr29:42364208-42363931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               23, 162
               

               Conread position:
               62-336
               

               Cow position:
               chr29:32290413-32290694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 42
               

               Conread position:
               62-336
               

               Cow position:
               chr29:44378608-44378334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               62-337
               

               Cow position:
               chr29:2984695-2984976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 34
               

               Conread position:
               62-337
               

               Cow position:
               chr29:23984152-23983869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 230
               

               Conread position:
               62-351
               

               Cow position:
               chr29:7956173-7955890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               124, 23
               

               Conread position:
               62-351
               

               Cow position:
               chr29:21443533-21443237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               79, 17
               

               Conread position:
               62-356
               

               Cow position:
               chr29:87211-86906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 234
               

               Conread position:
               62-356
               

               Cow position:
               chr29:19756259-19756535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               22, 47
               

               Conread position:
               62-356
               

               Cow position:
               chr29:20903477-20903184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 81
               

               Conread position:
               62-356
               

               Cow position:
               chr29:40299202-40298914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               23, 47
               

               Conread position:
               62-365
               

               Cow position:
               chr29:37785368-37785060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               23, 166
               

               Conread position:
               62-367
               

               Cow position:
               chr29:5186688-5186376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 86
               

               Conread position:
               62-367
               

               Cow position:
               chr29:34297754-34297450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               124, 23
               

               Conread position:
               62-368
               

               Cow position:
               chr29:26673095-26672795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               23, 32
               

               Conread position:
               62-368
               

               Cow position:
               chr29:38580786-38581096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 67
               

               Conread position:
               62-379
               

               Cow position:
               chr29:22162440-22162120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 23
               

               Conread position:
               62-379
               

               Cow position:
               chr29:44988971-44988663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 48
               

               Conread position:
               62-385
               

               Cow position:
               chr29:23874270-23874597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               23, 37
               

               Conread position:
               62-410
               

               Cow position:
               chr29:43009274-43008922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               23, 43
               

               Conread position:
               63-219
               

               Cow position:
               chr29:4065898-4066057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               123, 16
               

               Conread position:
               63-265
               

               Cow position:
               chr29:10659532-10659338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               25, 120
               

               Conread position:
               63-316
               

               Cow position:
               chr29:26334578-26334323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               23, 80
               

               Conread position:
               63-329
               

               Cow position:
               chr29:39329786-39329526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 141
               

               Conread position:
               63-336
               

               Cow position:
               chr29:26263662-26263921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               83, 22
               

               Conread position:
               63-353
               

               Cow position:
               chr29:1556744-1557034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               123, 22
               

               Conread position:
               63-355
               

               Cow position:
               chr29:4334539-4334821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 16
               

               Conread position:
               63-358
               

               Cow position:
               chr29:30440737-30441044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 54
               

               Conread position:
               64-276
               

               Cow position:
               chr29:23263194-23262970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               72, 20
               

               Conread position:
               64-283
               

               Cow position:
               chr29:7666218-7665998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 25
               

               Conread position:
               64-331
               

               Cow position:
               chr29:14838998-14838721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 231
               

               Conread position:
               64-364
               

               Cow position:
               chr29:16657497-16657821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 235
               

               Conread position:
               65-267
               

               Cow position:
               chr29:24345640-24345432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               19, 205
               

               Conread position:
               65-276
               

               Cow position:
               chr29:42268505-42268722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               20, 150
               

               Conread position:
               65-283
               

               Cow position:
               chr29:6878887-6878664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               65-316
               

               Cow position:
               chr29:35077172-35077427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               20, 143
               

               Conread position:
               65-327
               

               Cow position:
               chr29:13553946-13554211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               20, 29
               

               Conread position:
               65-327
               

               Cow position:
               chr29:18072743-18073014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               20, 138
               

               Conread position:
               65-419
               

               Cow position:
               chr29:11787606-11787965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 179
               

               Conread position:
               66-276
               

               Cow position:
               chr29:2522389-2522590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               20, 26
               

               Conread position:
               66-320
               

               Cow position:
               chr29:16348255-16348512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               18, 224
               

               Conread position:
               66-325
               

               Cow position:
               chr29:4625181-4624926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               66-328
               

               Cow position:
               chr29:20910886-20910616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               20, 24
               

               Conread position:
               66-336
               

               Cow position:
               chr29:26129312-26129579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               19, 145
               

               Conread position:
               66-370
               

               Cow position:
               chr29:6217735-6217423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               66-395
               

               Cow position:
               chr29:31928796-31929133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 19
               

               Conread position:
               66-414
               

               Cow position:
               chr29:28166403-28166066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 154
               

               Conread position:
               67-294
               

               Cow position:
               chr29:3539105-3538863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               75, 17
               

               Conread position:
               67-324
               

               Cow position:
               chr29:29475440-29475184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               67-356
               

               Cow position:
               chr29:41113045-41112775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               68-281
               

               Cow position:
               chr29:24628011-24627790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               68-309
               

               Cow position:
               chr29:17301341-17301591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               17, 28
               

               Conread position:
               68-331
               

               Cow position:
               chr29:29149482-29149752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               17, 159
               

               Conread position:
               68-337
               

               Cow position:
               chr29:27588736-27589009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               10, 33
               

               Conread position:
               68-379
               

               Cow position:
               chr29:12025655-12025335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 11
               

               Conread position:
               69-316
               

               Cow position:
               chr29:15809628-15809879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 139
               

               Conread position:
               69-379
               

               Cow position:
               chr29:8669184-8669496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 20
               

               Conread position:
               70-336
               

               Cow position:
               chr29:26330027-26330283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               111, 14
               

               Conread position:
               71-324
               

               Cow position:
               chr29:29942915-29942655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               71-349
               

               Cow position:
               chr29:10235310-10235036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 43
               

               Conread position:
               72-325
               

               Cow position:
               chr29:19389301-19389551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               13, 126
               

               Conread position:
               72-336
               

               Cow position:
               chr29:35458954-35458687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               114, 35
               

               Conread position:
               73-336
               

               Cow position:
               chr29:39023523-39023253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               87, 9
               

               Conread position:
               73-356
               

               Cow position:
               chr29:17296948-17297242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 157
               

               Conread position:
               73-419
               

               Cow position:
               chr29:11071882-11071507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               12, 70
               

               Conread position:
               74-282
               

               Cow position:
               chr29:1956266-1956060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 86
               

               Conread position:
               74-329
               

               Cow position:
               chr29:13639549-13639289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 20
               

               Conread position:
               74-354
               

               Cow position:
               chr29:43099923-43099642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               74-356
               

               Cow position:
               chr29:9310447-9310706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               14, 57
               

               Conread position:
               77-306
               

               Cow position:
               chr29:856592-856348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               7, 175
               

               Conread position:
               77-313
               

               Cow position:
               chr29:12900726-12900490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 9
               

               Conread position:
               77-314
               

               Cow position:
               chr29:26771258-26771501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               77-335
               

               Cow position:
               chr29:16359437-16359705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 228
               

               Conread position:
               77-336
               

               Cow position:
               chr29:29302830-29302574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               8, 110
               

               Conread position:
               78-329
               

               Cow position:
               chr29:17281-17035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 112
               

               Conread position:
               78-336
               

               Cow position:
               chr29:26654214-26653959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 140
               

               Conread position:
               79-298
               

               Cow position:
               chr29:3502392-3502617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               6, 61
               

               Conread position:
               79-331
               

               Cow position:
               chr29:25815007-25814757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               60, 10
               

               Conread position:
               80-334
               

               Cow position:
               chr29:31891698-31891448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               6, 43
               

               Conread position:
               82-334
               

               Cow position:
               chr29:5409319-5409058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               54, 152
               

               Conread position:
               82-335
               

               Cow position:
               chr29:32799884-32799628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               201
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               54, 178
               

               Conread position:
               82-351
               

               Cow position:
               chr29:4085147-4085410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               60, 90
               

               Conread position:
               82-356
               

               Cow position:
               chr29:25333635-25333355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 60
               

               Conread position:
               82-379
               

               Cow position:
               chr29:35291918-35292227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               83-293
               

               Cow position:
               chr29:1395428-1395639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               102, 25
               

               Conread position:
               83-323
               

               Cow position:
               chr29:10018402-10018650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               5, 88
               

               Conread position:
               83-323
               

               Cow position:
               chr29:22068919-22068669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               64, 34
               

               Conread position:
               83-325
               

               Cow position:
               chr29:23951740-23951508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               56, 127
               

               Conread position:
               83-325
               

               Cow position:
               chr29:28587286-28587525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               53, 80
               

               Conread position:
               83-331
               

               Cow position:
               chr29:19549397-19549147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               38, 140
               

               Conread position:
               83-336
               

               Cow position:
               chr29:9912001-9912261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 208
               

               Conread position:
               83-336
               

               Cow position:
               chr29:24252067-24252320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 141
               

               Conread position:
               83-356
               

               Cow position:
               chr29:41811752-41811484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               245, 12
               

               Conread position:
               83-364
               

               Cow position:
               chr29:45005794-45005515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 38
               

               Conread position:
               83-370
               

               Cow position:
               chr29:19428487-19428780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 141
               

               Conread position:
               83-370
               

               Cow position:
               chr29:29769522-29769228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 130
               

               Conread position:
               83-377
               

               Cow position:
               chr29:23244051-23243751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 128
               

               Conread position:
               83-379
               

               Cow position:
               chr29:27826354-27826646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               219
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               11, 127
               

               Conread position:
               83-414
               

               Cow position:
               chr29:23241969-23242320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               54, 26
               

               Conread position:
               83-416
               

               Cow position:
               chr29:44682268-44681936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 76
               

               Conread position:
               84-291
               

               Cow position:
               chr29:21534846-21534633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               76, 45
               

               Conread position:
               84-355
               

               Cow position:
               chr29:34773904-34773631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               99, 127
               

               Conread position:
               85-379
               

               Cow position:
               chr29:22895557-22895849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               75, 203
               

               Conread position:
               86-271
               

               Cow position:
               chr29:25432235-25432417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               56, 127
               

               Conread position:
               86-368
               

               Cow position:
               chr29:40583625-40583903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               99, 137
               

               Conread position:
               87-336
               

               Cow position:
               chr29:26319019-26319250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               87-356
               

               Cow position:
               chr29:22029106-22028849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               128, 76
               

               Conread position:
               88-325
               

               Cow position:
               chr29:31674463-31674706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 203
               

               Conread position:
               88-335
               

               Cow position:
               chr29:29559886-29559636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               40, 211
               

               Conread position:
               89-356
               

               Cow position:
               chr29:10156467-10156200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               92, 19
               

               Conread position:
               91-256
               

               Cow position:
               chr29:35281333-35281503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               45, 118
               

               Conread position:
               91-280
               

               Cow position:
               chr29:30812587-30812781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               92-249
               

               Cow position:
               chr29:12798757-12798919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               92-333
               

               Cow position:
               chr29:2055898-2056143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               54, 21
               

               Conread position:
               92-336
               

               Cow position:
               chr29:42771489-42771720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               96, 67
               

               Conread position:
               92-367
               

               Cow position:
               chr29:26559403-26559129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 17
               

               Conread position:
               92-368
               

               Cow position:
               chr29:39111477-39111198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 199
               

               Conread position:
               93-215
               

               Cow position:
               chr29:5064326-5064444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               93-260
               

               Cow position:
               chr29:603476-603307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               71, 52
               

               Conread position:
               93-265
               

               Cow position:
               chr29:19186588-19186754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               93-268
               

               Cow position:
               chr29:4494961-4495138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               44, 117
               

               Conread position:
               93-328
               

               Cow position:
               chr29:11366084-11366315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               93-336
               

               Cow position:
               chr29:2589053-2588808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 12
               

               Conread position:
               93-348
               

               Cow position:
               chr29:10058697-10058439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               87, 195
               

               Conread position:
               93-379
               

               Cow position:
               chr29:4367559-4367848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               43, 198
               

               Conread position:
               93-419
               

               Cow position:
               chr29:18021841-18021503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 54
               

               Conread position:
               93-420
               

               Cow position:
               chr29:16309584-16309921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 20
               

               Conread position:
               94-280
               

               Cow position:
               chr29:45383965-45384157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               90, 124
               

               Conread position:
               94-297
               

               Cow position:
               chr29:1124495-1124700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               85, 125
               

               Conread position:
               94-376
               

               Cow position:
               chr29:19821127-19821410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               91, 126
               

               Conread position:
               95-262
               

               Cow position:
               chr29:40615681-40615509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               90, 9
               

               Conread position:
               95-269
               

               Cow position:
               chr29:25030662-25030481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 127
               

               Conread position:
               95-319
               

               Cow position:
               chr29:26986773-26986996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               93, 159
               

               Conread position:
               95-327
               

               Cow position:
               chr29:9938229-9938005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               119, 59
               

               Conread position:
               95-329
               

               Cow position:
               chr29:27668812-27668583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 14
               

               Conread position:
               95-336
               

               Cow position:
               chr29:9512714-9512961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               64, 151
               

               Conread position:
               95-351
               

               Cow position:
               chr29:26416201-26416452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 39
               

               Conread position:
               95-370
               

               Cow position:
               chr29:35442621-35442348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               65, 148
               

               Conread position:
               96-277
               

               Cow position:
               chr29:43311952-43311767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               84, 104
               

               Conread position:
               97-248
               

               Cow position:
               chr29:3395949-3396105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               88, 128
               

               Conread position:
               97-334
               

               Cow position:
               chr29:34745819-34745576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 161
               

               Conread position:
               97-351
               

               Cow position:
               chr29:37618149-37618407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 184
               

               Conread position:
               97-351
               

               Cow position:
               chr29:40960005-40959748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               45, 122
               

               Conread position:
               97-364
               

               Cow position:
               chr29:17154610-17154892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 200
               

               Conread position:
               97-385
               

               Cow position:
               chr29:22936118-22936403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               89, 36
               

               Conread position:
               97-419
               

               Cow position:
               chr29:18695100-18695423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               54, 63
               

               Conread position:
               98-315
               

               Cow position:
               chr29:29795544-29795319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               41, 144
               

               Conread position:
               98-327
               

               Cow position:
               chr29:28396532-28396770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               41, 85
               

               Conread position:
               99-368
               

               Cow position:
               chr29:29314810-29314530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 191
               

               Conread position:
               101-305
               

               Cow position:
               chr29:942474-942684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 148
               

               Conread position:
               101-327
               

               Cow position:
               chr29:7425482-7425704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 110
               

               Conread position:
               101-345
               

               Cow position:
               chr29:29551700-29551939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               77, 11
               

               Conread position:
               102-325
               

               Cow position:
               chr29:8816285-8816068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               39, 99
               

               Conread position:
               102-325
               

               Cow position:
               chr29:16272573-16272815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               37, 203
               

               Conread position:
               103-360
               

               Cow position:
               chr29:44008933-44008675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               33, 112
               

               Conread position:
               104-316
               

               Cow position:
               chr29:9455204-9454994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               35, 91
               

               Conread position:
               104-379
               

               Cow position:
               chr29:3685661-3685380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               96, 46
               

               Conread position:
               106-348
               

               Cow position:
               chr29:29176761-29176518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               107-327
               

               Cow position:
               chr29:40995033-40994816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               108-367
               

               Cow position:
               chr29:32733172-32733416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               220, 64
               

               Conread position:
               109-334
               

               Cow position:
               chr29:35084368-35084139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               31, 100
               

               Conread position:
               109-364
               

               Cow position:
               chr29:11005583-11005843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               33, 196
               

               Conread position:
               109-419
               

               Cow position:
               chr29:27816209-27816535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               110-324
               

               Cow position:
               chr29:24045846-24046068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               28, 184
               

               Conread position:
               110-325
               

               Cow position:
               chr29:5275399-5275179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               29, 60
               

               Conread position:
               110-335
               

               Cow position:
               chr29:4052128-4051907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               102, 133
               

               Conread position:
               110-337
               

               Cow position:
               chr29:290114-289887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               152, 53
               

               Conread position:
               110-348
               

               Cow position:
               chr29:21706534-21706301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               26, 85
               

               Conread position:
               110-377
               

               Cow position:
               chr29:11398067-11397800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               75, 30
               

               Conread position:
               113-282
               

               Cow position:
               chr29:29558569-29558402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               68, 113
               

               Conread position:
               114-336
               

               Cow position:
               chr29:36220387-36220619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               28, 181
               

               Conread position:
               114-368
               

               Cow position:
               chr29:18462695-18462432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               67, 181
               

               Conread position:
               115-267
               

               Cow position:
               chr29:26206729-26206880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               70, 98
               

               Conread position:
               115-269
               

               Cow position:
               chr29:18580154-18579992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               115-351
               

               Cow position:
               chr29:27329753-27329993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 104
               

               Conread position:
               115-419
               

               Cow position:
               chr29:31594269-31593958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               66, 127
               

               Conread position:
               117-355
               

               Cow position:
               chr29:4002759-4002997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               212, 51
               

               Conread position:
               117-355
               

               Cow position:
               chr29:31943743-31943973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               199, 61
               

               Conread position:
               119-328
               

               Cow position:
               chr29:25284597-25284386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               17, 43
               

               Conread position:
               120-254
               

               Cow position:
               chr29:10296345-10296214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               47, 51
               

               Conread position:
               123-325
               

               Cow position:
               chr29:8176517-8176728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               16, 172
               

               Conread position:
               125-356
               

               Cow position:
               chr29:34359109-34358872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               57, 107
               

               Conread position:
               129-317
               

               Cow position:
               chr29:28805635-28805823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               10, 79
               

               Conread position:
               130-310
               

               Cow position:
               chr29:630281-630455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               130-418
               

               Cow position:
               chr29:9512144-9512423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               83, 31
               

               Conread position:
               132-356
               

               Cow position:
               chr29:32925976-32926210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               26, 161
               

               Conread position:
               134-349
               

               Cow position:
               chr29:30227393-30227184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               49, 91
               

               Conread position:
               135-276
               

               Cow position:
               chr29:11489841-11489696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 90
               

               Conread position:
               135-318
               

               Cow position:
               chr29:27846350-27846530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               135-336
               

               Cow position:
               chr29:4444596-4444803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               46, 23
               

               Conread position:
               135-360
               

               Cow position:
               chr29:12626098-12625866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               50, 155
               

               Conread position:
               135-370
               

               Cow position:
               chr29:13028319-13028560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               51, 22
               

               Conread position:
               136-378
               

               Cow position:
               chr29:7310570-7310803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               192, 63
               

               Conread position:
               138-335
               

               Cow position:
               chr29:5046537-5046737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               44, 6
               

               Conread position:
               139-271
               

               Cow position:
               chr29:34534729-34534595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               78, 93
               

               Conread position:
               139-322
               

               Cow position:
               chr29:45589704-45589517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               45, 91
               

               Conread position:
               139-337
               

               Cow position:
               chr29:5063033-5063231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               44, 19
               

               Conread position:
               140-273
               

               Cow position:
               chr29:43282100-43281966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               140-323
               

               Cow position:
               chr29:22647736-22647917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               142-325
               

               Cow position:
               chr29:11719852-11720040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               42, 94
               

               Conread position:
               143-355
               

               Cow position:
               chr29:8163946-8163726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 128
               

               Conread position:
               145-334
               

               Cow position:
               chr29:18404222-18404034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               145-334
               

               Cow position:
               chr29:21941490-21941684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               38, 73
               

               Conread position:
               145-356
               

               Cow position:
               chr29:847750-847536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               41, 70
               

               Conread position:
               145-403
               

               Cow position:
               chr29:1007707-1007973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 116
               

               Conread position:
               145-419
               

               Cow position:
               chr29:6207961-6208240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               68, 85
               

               Conread position:
               147-325
               

               Cow position:
               chr29:17168298-17168481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               37, 91
               

               Conread position:
               147-325
               

               Cow position:
               chr29:28674814-28674632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 64
               

               Conread position:
               147-331
               

               Cow position:
               chr29:26477432-26477623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               39, 138
               

               Conread position:
               147-334
               

               Cow position:
               chr29:23389663-23389474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               39, 143
               

               Conread position:
               147-338
               

               Cow position:
               chr29:25839587-25839784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               39, 147
               

               Conread position:
               147-363
               

               Cow position:
               chr29:6015015-6015239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               39, 83
               

               Conread position:
               147-419
               

               Cow position:
               chr29:8862585-8862300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               39, 72
               

               Conread position:
               151-379
               

               Cow position:
               chr29:24578755-24578992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 141
               

               Conread position:
               152-356
               

               Cow position:
               chr29:13373197-13373407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               34, 69
               

               Conread position:
               152-356
               

               Cow position:
               chr29:13867306-13867104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               176, 27
               

               Conread position:
               153-336
               

               Cow position:
               chr29:27873503-27873686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               33, 51
               

               Conread position:
               158-335
               

               Cow position:
               chr29:7103466-7103642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               158-358
               

               Cow position:
               chr29:39038359-39038161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               170, 38
               

               Conread position:
               158-360
               

               Cow position:
               chr29:13486858-13487054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               7, 62
               

               Conread position:
               160-336
               

               Cow position:
               chr29:2263091-2262910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               26, 69
               

               Conread position:
               160-414
               

               Cow position:
               chr29:22721279-22721547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 132
               

               Conread position:
               161-331
               

               Cow position:
               chr29:20924817-20924986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               166, 46
               

               Conread position:
               161-351
               

               Cow position:
               chr29:18012467-18012659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               60, 124
               

               Conread position:
               162-334
               

               Cow position:
               chr29:12309924-12310091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               166, 19
               

               Conread position:
               163-333
               

               Cow position:
               chr29:22519215-22519045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               154, 117
               

               Conread position:
               163-370
               

               Cow position:
               chr29:15947080-15947289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               24, 56
               

               Conread position:
               163-396
               

               Cow position:
               chr29:30713800-30713564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               27, 59
               

               Conread position:
               164-355
               

               Cow position:
               chr29:694085-693904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               186, 52
               

               Conread position:
               164-356
               

               Cow position:
               chr29:20770259-20770450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               55, 121
               

               Conread position:
               164-356
               

               Cow position:
               chr29:32894184-32894369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               164, 41
               

               Conread position:
               164-371
               

               Cow position:
               chr29:28993776-28993983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               85, 49
               

               Conread position:
               164-371
               

               Cow position:
               chr29:31813864-31814060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               164, 49
               

               Conread position:
               165-337
               

               Cow position:
               chr29:18085486-18085658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               164, 119
               

               Conread position:
               166-325
               

               Cow position:
               chr29:39131542-39131390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               40, 14
               

               Conread position:
               167-334
               

               Cow position:
               chr29:23813123-23812956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 58
               

               Conread position:
               168-370
               

               Cow position:
               chr29:8005003-8004807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               162, 51
               

               Conread position:
               169-356
               

               Cow position:
               chr29:30548694-30548882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               160, 115
               

               Conread position:
               169-366
               

               Cow position:
               chr29:16290645-16290844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               159, 55
               

               Conread position:
               170-336
               

               Cow position:
               chr29:42886466-42886628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               159, 41
               

               Conread position:
               170-375
               

               Cow position:
               chr29:5788944-5789154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               26, 118
               

               Conread position:
               171-337
               

               Cow position:
               chr29:23220579-23220415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               46, 36
               

               Conread position:
               171-368
               

               Cow position:
               chr29:43183387-43183195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               159, 36
               

               Conread position:
               172-326
               

               Cow position:
               chr29:38348107-38347953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               69, 45
               

               Conread position:
               173-379
               

               Cow position:
               chr29:36952375-36952171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               44, 112
               

               Conread position:
               174-368
               

               Cow position:
               chr29:31200180-31200377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               18, 111
               

               Conread position:
               177-329
               

               Cow position:
               chr29:36830288-36830435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               177-336
               

               Cow position:
               chr29:40633573-40633728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               12, 46
               

               Conread position:
               179-351
               

               Cow position:
               chr29:5210417-5210592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               32, 108
               

               Conread position:
               179-370
               

               Cow position:
               chr29:19250279-19250465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               105, 14
               

               Conread position:
               180-377
               

               Cow position:
               chr29:23825289-23825081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 112
               

               Conread position:
               182-299
               

               Cow position:
               chr29:28559277-28559391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               182-334
               

               Cow position:
               chr29:20167356-20167507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               146, 37
               

               Conread position:
               182-351
               

               Cow position:
               chr29:32656365-32656535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               147, 25
               

               Conread position:
               182-355
               

               Cow position:
               chr29:44139312-44139139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               146, 100
               

               Conread position:
               182-356
               

               Cow position:
               chr29:18450201-18450032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               146, 32
               

               Conread position:
               182-414
               

               Cow position:
               chr29:38980137-38979915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               88, 25
               

               Conread position:
               183-323
               

               Cow position:
               chr29:36522429-36522288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 105
               

               Conread position:
               185-379
               

               Cow position:
               chr29:22167145-22166946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               34, 98
               

               Conread position:
               186-336
               

               Cow position:
               chr29:501137-501282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               145, 26
               

               Conread position:
               186-336
               

               Cow position:
               chr29:27926712-27926858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               6, 32
               

               Conread position:
               186-356
               

               Cow position:
               chr29:5995163-5994990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               27, 112
               

               Conread position:
               186-378
               

               Cow position:
               chr29:4691455-4691267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               36, 101
               

               Conread position:
               186-379
               

               Cow position:
               chr29:23825606-23825803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               88, 28
               

               Conread position:
               188-322
               

               Cow position:
               chr29:31477177-31477043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               188-359
               

               Cow position:
               chr29:5445782-5445616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               30, 97
               

               Conread position:
               189-348
               

               Cow position:
               chr29:43544661-43544504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               141, 30
               

               Conread position:
               190-336
               

               Cow position:
               chr29:42630063-42630206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               138, 29
               

               Conread position:
               193-351
               

               Cow position:
               chr29:40873953-40874112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               135, 91
               

               Conread position:
               196-364
               

               Cow position:
               chr29:23155175-23155340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               135, 11
               

               Conread position:
               203-337
               

               Cow position:
               chr29:40903127-40903261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               126, 79
               

               Conread position:
               203-368
               

               Cow position:
               chr29:11042385-11042546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               204-355
               

               Cow position:
               chr29:30918503-30918654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               126, 15
               

               Conread position:
               205-336
               

               Cow position:
               chr29:19559065-19558934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               125, 80
               

               Conread position:
               207-356
               

               Cow position:
               chr29:4070583-4070730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               211-356
               

               Cow position:
               chr29:36357089-36357232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               118, 62
               

               Conread position:
               212-337
               

               Cow position:
               chr29:14445084-14444959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               118, 66
               

               Conread position:
               214-368
               

               Cow position:
               chr29:29324457-29324308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               114, 70
               

               Conread position:
               215-349
               

               Cow position:
               chr29:26540576-26540440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               113, 69
               

               Conread position:
               216-365
               

               Cow position:
               chr29:683525-683365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               216-379
               

               Cow position:
               chr29:40791275-40791438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               114, 63
               

               Conread position:
               220-336
               

               Cow position:
               chr29:8686299-8686415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               108, 65
               

               Conread position:
               220-372
               

               Cow position:
               chr29:27819188-27819341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               109, 64
               

               Conread position:
               220-379
               

               Cow position:
               chr29:16278957-16279118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               108, 66
               

               Conread position:
               220-379
               

               Cow position:
               chr29:31981800-31981963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               108, 65
               
UCSC Genome Browser
               Conread position:
               222-356
               

               Cow position:
               chr29:31934350-31934485 (view  custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               107, 62
               
UCSC Genome Browser
               
               
               
Conread position: 225-379

               
               
               
Cow position: chr29:4423465-4423309 (view  custom track)

               
               
               
Alignm length: 158

               
               
               
Alignm identity: 126

               
               
               
Alignm E-value: 5e-32

               
               
               
Alignm gaps (pig, cow): 103, 60
UCSC Genome Browser
               
               
               
Conread position: 227-379

               
               
               
Cow position: chr29:31651387-31651543 (view  custom track)

               
               
               
Alignm length: 160

               
               
               
Alignm identity: 128

               
               
               
Alignm E-value: 1e-29

               
               
               
Alignm gaps (pig, cow): 69, 57

               
               
               Conread position:231-337
               
               
               Cow position:chr29:3292928-3293034 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:108
               
               
               Alignm identity:88
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):97, 54

               
               
               Conread position:232-389
               
               
               Cow position:chr29:11527808-11527649 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:129
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):97, 52

               
               
               Conread position:236-356
               
               
               Cow position:chr29:22723586-22723707 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:123
               
               
               Alignm identity:98
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):94, 48

               
               
               Conread position:237-379
               
               
               Cow position:chr29:29308586-29308441 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:115
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):10, 48

               
               
               Conread position:238-379
               
               
               Cow position:chr29:36781317-36781169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:118
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):91, 46
Show alignments to all cow chromosomes.
Conread position:	11-325
Cow position:	chr29:5109449-5109111 (view UCSC Genome Browser custom track)
Alignm length:	342
Alignm identity:	231
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	75, 15
Conread position:	23-316
Cow position:	chr29:27652854-27652564 (view UCSC Genome Browser custom track)
Alignm length:	304
Alignm identity:	216
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	94, 24
Conread position:	27-304
Cow position:	chr29:4805013-4805279 (view UCSC Genome Browser custom track)
Alignm length:	287
Alignm identity:	200
Alignm E-value:	7e-24
Alignm gaps (pig, cow):	59, 25
Conread position:	30-245
Cow position:	chr29:35636207-35636426 (view UCSC Genome Browser custom track)
Alignm length:	225
Alignm identity:	158
Alignm E-value:	8e-25
Alignm gaps (pig, cow):	114, 25
Conread position:	32-379
Cow position:	chr29:28195735-28195392 (view UCSC Genome Browser custom track)
Alignm length:	358
Alignm identity:	267
Alignm E-value:	0
Alignm gaps (pig, cow):	53, 23
Conread position:	35-175
Cow position:	chr29:13458843-13458980 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	108
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	101, 20
Conread position:	35-269
Cow position:	chr29:35738485-35738254 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	178
Alignm E-value:	4.00001e-40
Alignm gaps (pig, cow):	50, 10
Conread position:	35-310
Cow position:	chr29:18212198-18211940 (view UCSC Genome Browser custom track)
Alignm length:	282
Alignm identity:	204
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	107, 20
Conread position:	35-325
Cow position:	chr29:465617-465326 (view UCSC Genome Browser custom track)
Alignm length:	297
Alignm identity:	206
Alignm E-value:	3e-37
Alignm gaps (pig, cow):	50, 190
Conread position:	35-327
Cow position:	chr29:14615475-14615188 (view UCSC Genome Browser custom track)
Alignm length:	298
Alignm identity:	205
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	102, 10
Conread position:	35-336
Cow position:	chr29:94764-94484 (view UCSC Genome Browser custom track)
Alignm length:	310
Alignm identity:	230
Alignm E-value:	3e-37
Alignm gaps (pig, cow):	105, 10
Conread position:	35-351
Cow position:	chr29:5098977-5098665 (view UCSC Genome Browser custom track)
Alignm length:	320
Alignm identity:	234
Alignm E-value:	0
Alignm gaps (pig, cow):	50, 20
Conread position:	35-356
Cow position:	chr29:22175475-22175787 (view UCSC Genome Browser custom track)
Alignm length:	330
Alignm identity:	240
Alignm E-value:	7.00649e-45
Alignm gaps (pig, cow):	150, 20
Conread position:	35-365
Cow position:	chr29:356111-356436 (view UCSC Genome Browser custom track)
Alignm length:	333
Alignm identity:	233
Alignm E-value:	0
Alignm gaps (pig, cow):	295, 20
Conread position:	35-372
Cow position:	chr29:39567472-39567806 (view UCSC Genome Browser custom track)
Alignm length:	348
Alignm identity:	256
Alignm E-value:	0
Alignm gaps (pig, cow):	151, 18
Conread position:	35-379
Cow position:	chr29:26778669-26779017 (view UCSC Genome Browser custom track)
Alignm length:	360
Alignm identity:	253
Alignm E-value:	1.99993e-41
Alignm gaps (pig, cow):	50, 20
Conread position:	36-316
Cow position:	chr29:406479-406202 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	186
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	48, 17
Conread position:	36-317
Cow position:	chr29:7811180-7810896 (view UCSC Genome Browser custom track)
Alignm length:	291
Alignm identity:	189
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	48, 17
Conread position:	39-184
Cow position:	chr29:26508272-26508423 (view UCSC Genome Browser custom track)
Alignm length:	153
Alignm identity:	117
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	15, 40
Conread position:	41-316
Cow position:	chr29:10627839-10627559 (view UCSC Genome Browser custom track)
Alignm length:	282
Alignm identity:	181
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	5, 247