Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rmgp012_h16.5
        

               Conread position:
               24-379
               

               Cow position:
               chr7:19399859-19399511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               157, 31
               

               Conread position:
               25-184
               

               Cow position:
               chr7:59713284-59713444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               25-280
               

               Cow position:
               chr7:33297249-33297507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               60, 28
               

               Conread position:
               26-356
               

               Cow position:
               chr7:9800172-9800505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 72
               

               Conread position:
               27-277
               

               Cow position:
               chr7:19051503-19051250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               31, 40
               

               Conread position:
               27-367
               

               Cow position:
               chr7:59245783-59246112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               58, 28
               

               Conread position:
               27-413
               

               Cow position:
               chr7:45955746-45956131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               58, 28
               

               Conread position:
               29-277
               

               Cow position:
               chr7:40758424-40758162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 16
               

               Conread position:
               30-355
               

               Cow position:
               chr7:50066289-50065966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 23
               

               Conread position:
               31-379
               

               Cow position:
               chr7:53786140-53785805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 151
               

               Conread position:
               32-296
               

               Cow position:
               chr7:40335863-40336128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               107, 53
               

               Conread position:
               33-379
               

               Cow position:
               chr7:4764664-4765023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 69
               

               Conread position:
               34-336
               

               Cow position:
               chr7:58841479-58841778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               35-198
               

               Cow position:
               chr7:5399219-5399050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               35-240
               

               Cow position:
               chr7:23619257-23619048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               148, 20
               

               Conread position:
               35-244
               

               Cow position:
               chr7:53992526-53992738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               101, 49
               

               Conread position:
               35-258
               

               Cow position:
               chr7:39529172-39528940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               35-261
               

               Cow position:
               chr7:5914031-5914252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               35-262
               

               Cow position:
               chr7:13928326-13928097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               140, 20
               

               Conread position:
               35-265
               

               Cow position:
               chr7:54090031-54090267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               35-323
               

               Cow position:
               chr7:6706125-6706415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               35-325
               

               Cow position:
               chr7:39167293-39167580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               35-325
               

               Cow position:
               chr7:59691901-59692190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               101, 20
               

               Conread position:
               35-325
               

               Cow position:
               chr7:66179971-66179673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               50, 18
               

               Conread position:
               35-328
               

               Cow position:
               chr7:20968262-20968537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               153, 18
               

               Conread position:
               35-336
               

               Cow position:
               chr7:3283188-3283488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               35-336
               

               Cow position:
               chr7:3311668-3311968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               35-353
               

               Cow position:
               chr7:57537696-57537378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               51, 18
               

               Conread position:
               35-354
               

               Cow position:
               chr7:58302116-58301791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 18
               

               Conread position:
               35-356
               

               Cow position:
               chr7:17816582-17816899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 20
               

               Conread position:
               35-362
               

               Cow position:
               chr7:34084422-34084092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               50, 18
               

               Conread position:
               35-377
               

               Cow position:
               chr7:15755621-15755275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 18
               

               Conread position:
               35-394
               

               Cow position:
               chr7:38060605-38060242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 23
               

               Conread position:
               36-336
               

               Cow position:
               chr7:17412083-17412390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               39-354
               

               Cow position:
               chr7:32894417-32894100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 10
               

               Conread position:
               41-331
               

               Cow position:
               chr7:1321064-1320775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               43-226
               

               Cow position:
               chr7:50051665-50051485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               120, 35
               

               Conread position:
               45-276
               

               Cow position:
               chr7:32714405-32714641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               40, 163
               

               Conread position:
               45-283
               

               Cow position:
               chr7:27133121-27132879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               40, 45
               

               Conread position:
               45-294
               

               Cow position:
               chr7:21846215-21845962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               40, 157
               

               Conread position:
               45-302
               

               Cow position:
               chr7:26888127-26887861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               40, 250
               

               Conread position:
               45-313
               

               Cow position:
               chr7:33626761-33626493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               40, 162
               

               Conread position:
               45-325
               

               Cow position:
               chr7:3773433-3773149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 77
               

               Conread position:
               45-325
               

               Cow position:
               chr7:6154821-6155096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               40, 10
               

               Conread position:
               45-331
               

               Cow position:
               chr7:52680677-52680975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               40, 10
               

               Conread position:
               45-336
               

               Cow position:
               chr7:53742062-53741763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 200
               

               Conread position:
               45-350
               

               Cow position:
               chr7:37455160-37455461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 39
               

               Conread position:
               45-355
               

               Cow position:
               chr7:45331382-45331687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 110
               

               Conread position:
               45-419
               

               Cow position:
               chr7:1261857-1262252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               271
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               36, 10
               

               Conread position:
               46-291
               

               Cow position:
               chr7:53269030-53269284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               39, 9
               

               Conread position:
               48-249
               

               Cow position:
               chr7:34004207-34004392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               48-273
               

               Cow position:
               chr7:41445201-41445429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               94, 31
               

               Conread position:
               48-281
               

               Cow position:
               chr7:64236450-64236209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 189
               

               Conread position:
               48-300
               

               Cow position:
               chr7:1558576-1558826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               38, 52
               

               Conread position:
               48-325
               

               Cow position:
               chr7:14076430-14076165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               48-325
               

               Cow position:
               chr7:43894664-43894946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               37, 164
               

               Conread position:
               48-336
               

               Cow position:
               chr7:20242-20538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 168
               

               Conread position:
               48-336
               

               Cow position:
               chr7:12755309-12755027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               7, 97
               

               Conread position:
               48-336
               

               Cow position:
               chr7:25860348-25860077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               48-336
               

               Cow position:
               chr7:39158517-39158813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               96, 36
               

               Conread position:
               48-336
               

               Cow position:
               chr7:39160016-39160313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               37, 123
               

               Conread position:
               48-350
               

               Cow position:
               chr7:57259189-57258880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               48-355
               

               Cow position:
               chr7:39325583-39325875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               281, 37
               

               Conread position:
               48-356
               

               Cow position:
               chr7:25263211-25263518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 37
               

               Conread position:
               48-356
               

               Cow position:
               chr7:26911597-26911291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 38
               

               Conread position:
               48-356
               

               Cow position:
               chr7:48722065-48721756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 54
               

               Conread position:
               48-356
               

               Cow position:
               chr7:58967115-58967417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               94, 37
               

               Conread position:
               48-358
               

               Cow position:
               chr7:27079469-27079779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 31
               

               Conread position:
               48-361
               

               Cow position:
               chr7:45927315-45927008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 36
               

               Conread position:
               48-364
               

               Cow position:
               chr7:43908048-43908366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 33
               

               Conread position:
               48-377
               

               Cow position:
               chr7:49106362-49106029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 41
               

               Conread position:
               48-379
               

               Cow position:
               chr7:40566914-40567240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 36
               

               Conread position:
               48-395
               

               Cow position:
               chr7:64135624-64135275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 62
               

               Conread position:
               48-419
               

               Cow position:
               chr7:40303424-40303047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               89, 37
               

               Conread position:
               49-336
               

               Cow position:
               chr7:66335917-66335635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               36, 116
               

               Conread position:
               49-337
               

               Cow position:
               chr7:10943711-10943430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 6
               

               Conread position:
               49-347
               

               Cow position:
               chr7:68867947-68868240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               6, 15
               

               Conread position:
               49-351
               

               Cow position:
               chr7:32914953-32915260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 6
               

               Conread position:
               49-355
               

               Cow position:
               chr7:66748681-66748390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               136, 9
               

               Conread position:
               49-356
               

               Cow position:
               chr7:36569689-36570013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               49-369
               

               Cow position:
               chr7:60483579-60483263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               131, 9
               

               Conread position:
               51-356
               

               Cow position:
               chr7:20918505-20918196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               34, 68
               

               Conread position:
               52-171
               

               Cow position:
               chr7:2244663-2244547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               33, 75
               

               Conread position:
               52-178
               

               Cow position:
               chr7:35792961-35793083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               52-178
               

               Cow position:
               chr7:40276535-40276410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 112
               

               Conread position:
               52-184
               

               Cow position:
               chr7:6800711-6800578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               52-193
               

               Cow position:
               chr7:21315953-21316086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 39
               

               Conread position:
               52-200
               

               Cow position:
               chr7:63299110-63299256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 46
               

               Conread position:
               52-214
               

               Cow position:
               chr7:29010546-29010387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               129, 32
               

               Conread position:
               52-230
               

               Cow position:
               chr7:60749029-60749203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               87, 32
               

               Conread position:
               52-233
               

               Cow position:
               chr7:32824409-32824228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 52
               

               Conread position:
               52-248
               

               Cow position:
               chr7:56886940-56886743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 37
               

               Conread position:
               52-265
               

               Cow position:
               chr7:11715548-11715773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               52-274
               

               Cow position:
               chr7:18873057-18873280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               85, 32
               

               Conread position:
               52-280
               

               Cow position:
               chr7:4840652-4840886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 169
               

               Conread position:
               52-280
               

               Cow position:
               chr7:11161090-11161317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 62
               

               Conread position:
               52-290
               

               Cow position:
               chr7:59941466-59941710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               120, 33
               

               Conread position:
               52-312
               

               Cow position:
               chr7:62193407-62193671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               32, 160
               

               Conread position:
               52-313
               

               Cow position:
               chr7:68050942-68051205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               33, 209
               

               Conread position:
               52-323
               

               Cow position:
               chr7:24932569-24932302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               52-325
               

               Cow position:
               chr7:8813082-8812820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               87, 33
               

               Conread position:
               52-334
               

               Cow position:
               chr7:53763741-53763466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               216
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               52-336
               

               Cow position:
               chr7:8868664-8868956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               33, 173
               

               Conread position:
               52-336
               

               Cow position:
               chr7:34162627-34162911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               95, 32
               

               Conread position:
               52-336
               

               Cow position:
               chr7:37142520-37142244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               52-336
               

               Cow position:
               chr7:41464307-41464596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 182
               

               Conread position:
               52-336
               

               Cow position:
               chr7:48406656-48406364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 173
               

               Conread position:
               52-342
               

               Cow position:
               chr7:51319640-51319942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 79
               

               Conread position:
               52-349
               

               Cow position:
               chr7:17756882-17757174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 32
               

               Conread position:
               52-349
               

               Cow position:
               chr7:41328194-41327891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 53
               

               Conread position:
               52-351
               

               Cow position:
               chr7:10122554-10122837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               276, 27
               

               Conread position:
               52-353
               

               Cow position:
               chr7:39149781-39150097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 256
               

               Conread position:
               52-355
               

               Cow position:
               chr7:35275233-35274934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 41
               

               Conread position:
               52-355
               

               Cow position:
               chr7:41315594-41315287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 238
               

               Conread position:
               52-356
               

               Cow position:
               chr7:23646447-23646761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 167
               

               Conread position:
               52-356
               

               Cow position:
               chr7:23935954-23936261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 88
               

               Conread position:
               52-356
               

               Cow position:
               chr7:25722824-25722516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               52-356
               

               Cow position:
               chr7:27283523-27283824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 174
               

               Conread position:
               52-356
               

               Cow position:
               chr7:28916927-28917241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 176
               

               Conread position:
               52-356
               

               Cow position:
               chr7:37394161-37394448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 42
               

               Conread position:
               52-356
               

               Cow position:
               chr7:43109688-43109390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               89, 33
               

               Conread position:
               52-356
               

               Cow position:
               chr7:55688353-55688045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               52-360
               

               Cow position:
               chr7:23456972-23456667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               113, 32
               

               Conread position:
               52-368
               

               Cow position:
               chr7:10512868-10512550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 53
               

               Conread position:
               52-368
               

               Cow position:
               chr7:62793627-62793961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               129, 230
               

               Conread position:
               52-370
               

               Cow position:
               chr7:32791538-32791863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               32, 166
               

               Conread position:
               52-370
               

               Cow position:
               chr7:39451289-39450986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 32
               

               Conread position:
               52-370
               

               Cow position:
               chr7:58362791-58363107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               33, 195
               

               Conread position:
               52-377
               

               Cow position:
               chr7:64003313-64003625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               113, 33
               

               Conread position:
               52-379
               

               Cow position:
               chr7:10448940-10448629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 131
               

               Conread position:
               52-379
               

               Cow position:
               chr7:19466423-19466074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               256
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               32, 173
               

               Conread position:
               52-379
               

               Cow position:
               chr7:23205785-23205441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               249
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               129, 32
               

               Conread position:
               52-379
               

               Cow position:
               chr7:40263808-40263488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 136
               

               Conread position:
               52-414
               

               Cow position:
               chr7:48243519-48243875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 27
               

               Conread position:
               52-415
               

               Cow position:
               chr7:59075695-59076069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               33, 65
               

               Conread position:
               52-416
               

               Cow position:
               chr7:6057975-6058345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 85
               

               Conread position:
               52-416
               

               Cow position:
               chr7:26631967-26631595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 32
               

               Conread position:
               53-324
               

               Cow position:
               chr7:2923487-2923764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 238
               

               Conread position:
               53-354
               

               Cow position:
               chr7:31094507-31094200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 79
               

               Conread position:
               53-379
               

               Cow position:
               chr7:23679750-23679408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 167
               

               Conread position:
               54-222
               

               Cow position:
               chr7:23447062-23446889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 88
               

               Conread position:
               54-325
               

               Cow position:
               chr7:53097436-53097708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 53
               

               Conread position:
               54-349
               

               Cow position:
               chr7:35893259-35893559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 171
               

               Conread position:
               54-355
               

               Cow position:
               chr7:40406501-40406798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 121
               

               Conread position:
               54-356
               

               Cow position:
               chr7:17713627-17713321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               55-212
               

               Cow position:
               chr7:45658539-45658380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               86, 30
               

               Conread position:
               55-235
               

               Cow position:
               chr7:1489718-1489907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               30, 161
               

               Conread position:
               55-263
               

               Cow position:
               chr7:28337092-28337305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 159
               

               Conread position:
               55-346
               

               Cow position:
               chr7:48815479-48815765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               146, 31
               

               Conread position:
               55-355
               

               Cow position:
               chr7:20534720-20535021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 66
               

               Conread position:
               56-282
               

               Cow position:
               chr7:43055851-43055629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               29, 38
               

               Conread position:
               56-283
               

               Cow position:
               chr7:36724757-36724984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               56-336
               

               Cow position:
               chr7:43234596-43234316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               8, 30
               

               Conread position:
               57-284
               

               Cow position:
               chr7:27994521-27994291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               57-335
               

               Cow position:
               chr7:43881927-43882209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               82, 28
               

               Conread position:
               57-344
               

               Cow position:
               chr7:18306994-18306708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               28, 179
               

               Conread position:
               58-157
               

               Cow position:
               chr7:62544057-62543957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               58-166
               

               Cow position:
               chr7:46928835-46928944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               58-180
               

               Cow position:
               chr7:27136348-27136471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               58-184
               

               Cow position:
               chr7:20779999-20780126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               24, 41
               

               Conread position:
               58-212
               

               Cow position:
               chr7:35779299-35779458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               89, 19
               

               Conread position:
               58-227
               

               Cow position:
               chr7:11422492-11422656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               77, 21
               

               Conread position:
               58-227
               

               Cow position:
               chr7:40262293-40262127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               31, 86
               

               Conread position:
               58-228
               

               Cow position:
               chr7:6820738-6820920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 170
               

               Conread position:
               58-247
               

               Cow position:
               chr7:7142216-7142018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               27, 171
               

               Conread position:
               58-249
               

               Cow position:
               chr7:28090090-28090276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               125, 27
               

               Conread position:
               58-257
               

               Cow position:
               chr7:16220275-16220075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               84, 26
               

               Conread position:
               58-258
               

               Cow position:
               chr7:5402064-5401850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 25
               

               Conread position:
               58-258
               

               Cow position:
               chr7:24564769-24564566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               25, 162
               

               Conread position:
               58-258
               

               Cow position:
               chr7:27991705-27991506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               27, 51
               

               Conread position:
               58-258
               

               Cow position:
               chr7:35652230-35652021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               28, 38
               

               Conread position:
               58-261
               

               Cow position:
               chr7:58614644-58614843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               85, 27
               

               Conread position:
               58-262
               

               Cow position:
               chr7:24718685-24718476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               28, 148
               

               Conread position:
               58-265
               

               Cow position:
               chr7:7476595-7476389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 67
               

               Conread position:
               58-265
               

               Cow position:
               chr7:12212756-12212541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               58-265
               

               Cow position:
               chr7:26915164-26915375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               27, 151
               

               Conread position:
               58-265
               

               Cow position:
               chr7:39401805-39402018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               27, 164
               

               Conread position:
               58-266
               

               Cow position:
               chr7:61765164-61765377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               30, 50
               

               Conread position:
               58-267
               

               Cow position:
               chr7:65568733-65568519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 166
               

               Conread position:
               58-271
               

               Cow position:
               chr7:26771725-26771935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               58-272
               

               Cow position:
               chr7:44095093-44094869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               58-272
               

               Cow position:
               chr7:64102559-64102345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               27, 151
               

               Conread position:
               58-273
               

               Cow position:
               chr7:40991556-40991771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               27, 50
               

               Conread position:
               58-275
               

               Cow position:
               chr7:6745051-6745285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               28, 49
               

               Conread position:
               58-275
               

               Cow position:
               chr7:32819662-32819887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               58-280
               

               Cow position:
               chr7:5034600-5034819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               27, 130
               

               Conread position:
               58-280
               

               Cow position:
               chr7:39042455-39042671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               80, 26
               

               Conread position:
               58-281
               

               Cow position:
               chr7:19096181-19095953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               26, 104
               

               Conread position:
               58-281
               

               Cow position:
               chr7:22357639-22357408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               27, 157
               

               Conread position:
               58-281
               

               Cow position:
               chr7:24778262-24778046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               84, 27
               

               Conread position:
               58-281
               

               Cow position:
               chr7:36714784-36714553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               58-281
               

               Cow position:
               chr7:67850199-67850431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               58-282
               

               Cow position:
               chr7:20415454-20415213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               27, 42
               

               Conread position:
               58-283
               

               Cow position:
               chr7:12659147-12658911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               29, 187
               

               Conread position:
               58-284
               

               Cow position:
               chr7:64331006-64331250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               27, 184
               

               Conread position:
               58-285
               

               Cow position:
               chr7:61818087-61817858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               131, 21
               

               Conread position:
               58-289
               

               Cow position:
               chr7:50203173-50202931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               58-299
               

               Cow position:
               chr7:1463732-1463965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               88, 23
               

               Conread position:
               58-299
               

               Cow position:
               chr7:24991126-24991358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               27, 65
               

               Conread position:
               58-300
               

               Cow position:
               chr7:42429719-42429969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 164
               

               Conread position:
               58-300
               

               Cow position:
               chr7:62394865-62395102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               58-308
               

               Cow position:
               chr7:47937072-47936815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               27, 169
               

               Conread position:
               58-309
               

               Cow position:
               chr7:40051909-40051658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 161
               

               Conread position:
               58-310
               

               Cow position:
               chr7:43658312-43658567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               27, 137
               

               Conread position:
               58-312
               

               Cow position:
               chr7:28584099-28584358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               125, 26
               

               Conread position:
               58-313
               

               Cow position:
               chr7:50465767-50466025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 228
               

               Conread position:
               58-314
               

               Cow position:
               chr7:12413447-12413202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               64, 27
               

               Conread position:
               58-314
               

               Cow position:
               chr7:39154958-39155220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               58-315
               

               Cow position:
               chr7:24827905-24827638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 155
               

               Conread position:
               58-316
               

               Cow position:
               chr7:4864186-4863940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               78, 27
               

               Conread position:
               58-316
               

               Cow position:
               chr7:37568880-37569157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               26, 247
               

               Conread position:
               58-316
               

               Cow position:
               chr7:38024462-38024207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               128, 27
               

               Conread position:
               58-316
               

               Cow position:
               chr7:39644351-39644614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 168
               

               Conread position:
               58-316
               

               Cow position:
               chr7:43677159-43676893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 149
               

               Conread position:
               58-318
               

               Cow position:
               chr7:34223534-34223804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 237
               

               Conread position:
               58-320
               

               Cow position:
               chr7:43103605-43103321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               218
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               86, 26
               

               Conread position:
               58-323
               

               Cow position:
               chr7:9074910-9075167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               84, 32
               

               Conread position:
               58-323
               

               Cow position:
               chr7:14005721-14005996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 238
               

               Conread position:
               58-323
               

               Cow position:
               chr7:44496714-44496456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 117
               

               Conread position:
               58-325
               

               Cow position:
               chr7:1375544-1375811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               27, 106
               

               Conread position:
               58-325
               

               Cow position:
               chr7:8877729-8877997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               58-325
               

               Cow position:
               chr7:9145632-9145342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               58-325
               

               Cow position:
               chr7:23664247-23663983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               27, 131
               

               Conread position:
               58-325
               

               Cow position:
               chr7:28324485-28324743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               27, 152
               

               Conread position:
               58-325
               

               Cow position:
               chr7:39939587-39939853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               27, 42
               

               Conread position:
               58-325
               

               Cow position:
               chr7:64229046-64228775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               81, 27
               

               Conread position:
               58-325
               

               Cow position:
               chr7:64269136-64268877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               82, 27
               

               Conread position:
               58-326
               

               Cow position:
               chr7:33280139-33279879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               81, 28
               

               Conread position:
               58-327
               

               Cow position:
               chr7:19948798-19948533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 88
               

               Conread position:
               58-327
               

               Cow position:
               chr7:39145902-39145626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               81, 27
               

               Conread position:
               58-328
               

               Cow position:
               chr7:32283763-32284041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               26, 237
               

               Conread position:
               58-329
               

               Cow position:
               chr7:268844-269100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               78, 27
               

               Conread position:
               58-329
               

               Cow position:
               chr7:26012274-26012560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               27, 242
               

               Conread position:
               58-329
               

               Cow position:
               chr7:57911458-57911733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               27, 183
               

               Conread position:
               58-330
               

               Cow position:
               chr7:32372709-32372980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 27
               

               Conread position:
               58-331
               

               Cow position:
               chr7:8777049-8777332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               79, 238
               

               Conread position:
               58-331
               

               Cow position:
               chr7:41910828-41911105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               26, 139
               

               Conread position:
               58-334
               

               Cow position:
               chr7:249654-249378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               58-334
               

               Cow position:
               chr7:25015272-25014999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               27, 175
               

               Conread position:
               58-334
               

               Cow position:
               chr7:25023610-25023337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               27, 175
               

               Conread position:
               58-336
               

               Cow position:
               chr7:19267519-19267241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 40
               

               Conread position:
               58-336
               

               Cow position:
               chr7:20168404-20168679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               97, 31
               

               Conread position:
               58-336
               

               Cow position:
               chr7:21303658-21303946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 226
               

               Conread position:
               58-336
               

               Cow position:
               chr7:21565700-21565435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 26
               

               Conread position:
               58-336
               

               Cow position:
               chr7:39100166-39099888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               27, 122
               

               Conread position:
               58-336
               

               Cow position:
               chr7:43184645-43184915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               27, 155
               

               Conread position:
               58-336
               

               Cow position:
               chr7:44454420-44454151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 26
               

               Conread position:
               58-336
               

               Cow position:
               chr7:53988909-53989179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               110, 35
               

               Conread position:
               58-336
               

               Cow position:
               chr7:58170591-58170868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 47
               

               Conread position:
               58-336
               

               Cow position:
               chr7:61790505-61790223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 39
               

               Conread position:
               58-336
               

               Cow position:
               chr7:67819970-67820245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               128, 26
               

               Conread position:
               58-337
               

               Cow position:
               chr7:147261-147545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 56
               

               Conread position:
               58-337
               

               Cow position:
               chr7:19981991-19981716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               78, 27
               

               Conread position:
               58-337
               

               Cow position:
               chr7:30276583-30276865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 151
               

               Conread position:
               58-337
               

               Cow position:
               chr7:56820721-56820452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 27
               

               Conread position:
               58-337
               

               Cow position:
               chr7:62733030-62733310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               28, 155
               

               Conread position:
               58-341
               

               Cow position:
               chr7:21649952-21650233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               7, 28
               

               Conread position:
               58-341
               

               Cow position:
               chr7:22624255-22623968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 63
               

               Conread position:
               58-341
               

               Cow position:
               chr7:55694194-55693918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               210
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               26, 51
               

               Conread position:
               58-344
               

               Cow position:
               chr7:52752042-52751761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               27, 88
               

               Conread position:
               58-348
               

               Cow position:
               chr7:34433429-34433140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 27
               

               Conread position:
               58-348
               

               Cow position:
               chr7:42244843-42244562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               58-349
               

               Cow position:
               chr7:38082006-38082299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 26
               

               Conread position:
               58-349
               

               Cow position:
               chr7:46823519-46823812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 27
               

               Conread position:
               58-349
               

               Cow position:
               chr7:47775718-47776003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               86, 27
               

               Conread position:
               58-349
               

               Cow position:
               chr7:54712265-54712564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 233
               

               Conread position:
               58-351
               

               Cow position:
               chr7:24873245-24872956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               90, 19
               

               Conread position:
               58-351
               

               Cow position:
               chr7:25195385-25195687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 149
               

               Conread position:
               58-351
               

               Cow position:
               chr7:38696698-38696988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 26
               

               Conread position:
               58-351
               

               Cow position:
               chr7:40894371-40894687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 179
               

               Conread position:
               58-351
               

               Cow position:
               chr7:46051505-46051801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 27
               

               Conread position:
               58-351
               

               Cow position:
               chr7:50095230-50095531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 112
               

               Conread position:
               58-351
               

               Cow position:
               chr7:53698065-53697762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 235
               

               Conread position:
               58-351
               

               Cow position:
               chr7:60153289-60153596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               27, 239
               

               Conread position:
               58-351
               

               Cow position:
               chr7:66894690-66894395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 27
               

               Conread position:
               58-353
               

               Cow position:
               chr7:41293898-41293599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               27, 44
               

               Conread position:
               58-354
               

               Cow position:
               chr7:4452450-4452752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 233
               

               Conread position:
               58-354
               

               Cow position:
               chr7:39518151-39518443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               58-354
               

               Cow position:
               chr7:47513841-47513537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 234
               

               Conread position:
               58-355
               

               Cow position:
               chr7:33393162-33393458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               24, 55
               

               Conread position:
               58-356
               

               Cow position:
               chr7:2172607-2172900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               84, 27
               

               Conread position:
               58-356
               

               Cow position:
               chr7:5027301-5027020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               157, 27
               

               Conread position:
               58-356
               

               Cow position:
               chr7:8977972-8977674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               27, 209
               

               Conread position:
               58-356
               

               Cow position:
               chr7:11176856-11176579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               186, 27
               

               Conread position:
               58-356
               

               Cow position:
               chr7:19798082-19797779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 81
               

               Conread position:
               58-356
               

               Cow position:
               chr7:25867655-25867350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               82, 27
               

               Conread position:
               58-356
               

               Cow position:
               chr7:26737489-26737196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 150
               

               Conread position:
               58-356
               

               Cow position:
               chr7:28095736-28096020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 27
               

               Conread position:
               58-356
               

               Cow position:
               chr7:36278145-36278447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 56
               

               Conread position:
               58-356
               

               Cow position:
               chr7:36665181-36665471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 38
               

               Conread position:
               58-356
               

               Cow position:
               chr7:37697654-37697955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 40
               

               Conread position:
               58-356
               

               Cow position:
               chr7:39415755-39416060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 232
               

               Conread position:
               58-356
               

               Cow position:
               chr7:42223096-42222789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               233
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               82, 26
               

               Conread position:
               58-356
               

               Cow position:
               chr7:46116801-46116489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               27, 54
               

               Conread position:
               58-356
               

               Cow position:
               chr7:51909983-51910269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               56, 28
               

               Conread position:
               58-356
               

               Cow position:
               chr7:54013207-54013523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               27, 68
               

               Conread position:
               58-356
               

               Cow position:
               chr7:54513572-54513256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 245
               

               Conread position:
               58-356
               

               Cow position:
               chr7:65122193-65122482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 36
               

               Conread position:
               58-358
               

               Cow position:
               chr7:30816436-30816140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 47
               

               Conread position:
               58-358
               

               Cow position:
               chr7:49750980-49751276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               125, 27
               

               Conread position:
               58-363
               

               Cow position:
               chr7:30307596-30307895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               29, 82
               

               Conread position:
               58-363
               

               Cow position:
               chr7:50859859-50860164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 196
               

               Conread position:
               58-363
               

               Cow position:
               chr7:64573210-64572900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               84, 31
               

               Conread position:
               58-364
               

               Cow position:
               chr7:11714577-11714269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               67, 26
               

               Conread position:
               58-364
               

               Cow position:
               chr7:12408389-12408082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 163
               

               Conread position:
               58-364
               

               Cow position:
               chr7:53612996-53613288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               85, 21
               

               Conread position:
               58-364
               

               Cow position:
               chr7:61551759-61552078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               152, 13
               

               Conread position:
               58-367
               

               Cow position:
               chr7:9193393-9193075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 24
               

               Conread position:
               58-368
               

               Cow position:
               chr7:17967268-17966958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 24
               

               Conread position:
               58-368
               

               Cow position:
               chr7:20537212-20537528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 50
               

               Conread position:
               58-368
               

               Cow position:
               chr7:37952029-37952339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 166
               

               Conread position:
               58-368
               

               Cow position:
               chr7:40953012-40952703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 32
               

               Conread position:
               58-368
               

               Cow position:
               chr7:44986508-44986815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 26
               

               Conread position:
               58-368
               

               Cow position:
               chr7:68170750-68170432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 52
               

               Conread position:
               58-369
               

               Cow position:
               chr7:63749628-63749315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 229
               

               Conread position:
               58-370
               

               Cow position:
               chr7:29479372-29479690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 176
               

               Conread position:
               58-370
               

               Cow position:
               chr7:29509804-29510103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 27
               

               Conread position:
               58-370
               

               Cow position:
               chr7:36996228-36996523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 26
               

               Conread position:
               58-370
               

               Cow position:
               chr7:51019637-51019942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 27
               

               Conread position:
               58-370
               

               Cow position:
               chr7:52718784-52718473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 38
               

               Conread position:
               58-371
               

               Cow position:
               chr7:33989811-33990117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 24
               

               Conread position:
               58-377
               

               Cow position:
               chr7:14029186-14029480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               27, 36
               

               Conread position:
               58-377
               

               Cow position:
               chr7:30932127-30931808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 21
               

               Conread position:
               58-377
               

               Cow position:
               chr7:40189407-40189721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 27
               

               Conread position:
               58-379
               

               Cow position:
               chr7:4892719-4893033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 22
               

               Conread position:
               58-379
               

               Cow position:
               chr7:11066325-11066656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 44
               

               Conread position:
               58-379
               

               Cow position:
               chr7:29300910-29300592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 115
               

               Conread position:
               58-379
               

               Cow position:
               chr7:31315171-31315485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               127, 24
               

               Conread position:
               58-379
               

               Cow position:
               chr7:53382047-53382365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 156
               

               Conread position:
               58-379
               

               Cow position:
               chr7:64948968-64949284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               123, 27
               

               Conread position:
               58-380
               

               Cow position:
               chr7:52294982-52295302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               130, 27
               

               Conread position:
               58-380
               

               Cow position:
               chr7:59168128-59168440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               272, 26
               

               Conread position:
               58-383
               

               Cow position:
               chr7:32711130-32710806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 164
               

               Conread position:
               58-412
               

               Cow position:
               chr7:15608260-15608603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               26, 82
               

               Conread position:
               58-414
               

               Cow position:
               chr7:35111422-35111777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               26, 95
               

               Conread position:
               58-414
               

               Cow position:
               chr7:56838648-56838286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               263
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               27, 128
               

               Conread position:
               58-415
               

               Cow position:
               chr7:15547903-15548244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               261
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               27, 107
               

               Conread position:
               58-416
               

               Cow position:
               chr7:31171102-31170720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 56
               

               Conread position:
               58-416
               

               Cow position:
               chr7:37361734-37362091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 60
               

               Conread position:
               58-419
               

               Cow position:
               chr7:44049516-44049154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 21
               

               Conread position:
               58-419
               

               Cow position:
               chr7:50075876-50075510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               27, 56
               

               Conread position:
               58-419
               

               Cow position:
               chr7:69066547-69066921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               127, 26
               

               Conread position:
               59-221
               

               Cow position:
               chr7:59646010-59645845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               59-229
               

               Cow position:
               chr7:40571119-40571293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               27, 152
               

               Conread position:
               59-249
               

               Cow position:
               chr7:3728942-3729130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               77, 26
               

               Conread position:
               59-273
               

               Cow position:
               chr7:51072091-51072310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               80, 23
               

               Conread position:
               59-326
               

               Cow position:
               chr7:20219988-20219722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               26, 161
               

               Conread position:
               59-328
               

               Cow position:
               chr7:14481908-14482186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               26, 161
               

               Conread position:
               59-334
               

               Cow position:
               chr7:25104215-25104498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               104, 25
               

               Conread position:
               59-334
               

               Cow position:
               chr7:57660311-57660038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               71, 26
               

               Conread position:
               59-336
               

               Cow position:
               chr7:30156107-30155819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               59-337
               

               Cow position:
               chr7:23568889-23568606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 220
               

               Conread position:
               59-351
               

               Cow position:
               chr7:62603034-62603322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               83, 26
               

               Conread position:
               59-354
               

               Cow position:
               chr7:45592889-45593188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 54
               

               Conread position:
               59-355
               

               Cow position:
               chr7:41872240-41871956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               27, 42
               

               Conread position:
               59-356
               

               Cow position:
               chr7:29280171-29279871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 78
               

               Conread position:
               59-356
               

               Cow position:
               chr7:40067509-40067810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 27
               

               Conread position:
               59-356
               

               Cow position:
               chr7:53053554-53053253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 228
               

               Conread position:
               59-363
               

               Cow position:
               chr7:40121318-40121628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 26
               

               Conread position:
               59-367
               

               Cow position:
               chr7:20176859-20176548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 90
               

               Conread position:
               59-368
               

               Cow position:
               chr7:14536432-14536119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 33
               

               Conread position:
               59-395
               

               Cow position:
               chr7:39144541-39144882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               82, 26
               

               Conread position:
               61-349
               

               Cow position:
               chr7:22828565-22828268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               61-355
               

               Cow position:
               chr7:11960268-11960544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               25, 37
               

               Conread position:
               61-360
               

               Cow position:
               chr7:39102558-39102244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               151, 23
               

               Conread position:
               61-363
               

               Cow position:
               chr7:15566611-15566908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 46
               

               Conread position:
               62-175
               

               Cow position:
               chr7:11160147-11160032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               62-211
               

               Cow position:
               chr7:12995013-12995166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               23, 60
               

               Conread position:
               62-212
               

               Cow position:
               chr7:29474541-29474695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 124
               

               Conread position:
               62-220
               

               Cow position:
               chr7:61129073-61129237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               62-246
               

               Cow position:
               chr7:47187380-47187567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 105
               

               Conread position:
               62-263
               

               Cow position:
               chr7:42431678-42431885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               23, 160
               

               Conread position:
               62-265
               

               Cow position:
               chr7:46148718-46148917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               153, 17
               

               Conread position:
               62-270
               

               Cow position:
               chr7:34569054-34569251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               23, 78
               

               Conread position:
               62-277
               

               Cow position:
               chr7:21240255-21240046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               62-277
               

               Cow position:
               chr7:37817993-37817778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               62-282
               

               Cow position:
               chr7:65689676-65689457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               62-283
               

               Cow position:
               chr7:41879648-41879413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               23, 15
               

               Conread position:
               62-283
               

               Cow position:
               chr7:53361522-53361312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               76, 22
               

               Conread position:
               62-284
               

               Cow position:
               chr7:8883863-8884070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               175
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               62-302
               

               Cow position:
               chr7:14459062-14458828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               22, 36
               

               Conread position:
               62-319
               

               Cow position:
               chr7:18544525-18544270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 109
               

               Conread position:
               62-325
               

               Cow position:
               chr7:10373613-10373338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               23, 167
               

               Conread position:
               62-327
               

               Cow position:
               chr7:39169756-39170029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               23, 40
               

               Conread position:
               62-328
               

               Cow position:
               chr7:27509571-27509835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               161, 23
               

               Conread position:
               62-336
               

               Cow position:
               chr7:39147651-39147932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               23, 40
               

               Conread position:
               62-336
               

               Cow position:
               chr7:59030846-59031107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               106, 24
               

               Conread position:
               62-342
               

               Cow position:
               chr7:2884198-2884472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               62-356
               

               Cow position:
               chr7:9146497-9146792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 23
               

               Conread position:
               62-356
               

               Cow position:
               chr7:25512266-25511974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 40
               

               Conread position:
               62-356
               

               Cow position:
               chr7:40008672-40008979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 23
               

               Conread position:
               62-356
               

               Cow position:
               chr7:40709962-40710278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 244
               

               Conread position:
               62-356
               

               Cow position:
               chr7:46818644-46818345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 227
               

               Conread position:
               62-356
               

               Cow position:
               chr7:64364674-64364378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 27
               

               Conread position:
               62-356
               

               Cow position:
               chr7:67873036-67873343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 235
               

               Conread position:
               62-358
               

               Cow position:
               chr7:3026869-3026569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               62-360
               

               Cow position:
               chr7:2896612-2896909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               23, 199
               

               Conread position:
               62-368
               

               Cow position:
               chr7:28563528-28563230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 30
               

               Conread position:
               62-368
               

               Cow position:
               chr7:63022994-63023315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               23, 30
               

               Conread position:
               62-369
               

               Cow position:
               chr7:52776901-52776596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               62-369
               

               Cow position:
               chr7:63112918-63112615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               80, 24
               

               Conread position:
               62-370
               

               Cow position:
               chr7:18388544-18388233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 23
               

               Conread position:
               62-379
               

               Cow position:
               chr7:3336697-3336377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 24
               

               Conread position:
               62-379
               

               Cow position:
               chr7:14524323-14524655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 164
               

               Conread position:
               62-379
               

               Cow position:
               chr7:22793199-22793519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 137
               

               Conread position:
               62-379
               

               Cow position:
               chr7:39444747-39444433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 37
               

               Conread position:
               62-379
               

               Cow position:
               chr7:40321340-40321665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               62-379
               

               Cow position:
               chr7:65597749-65597438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               80, 23
               

               Conread position:
               62-408
               

               Cow position:
               chr7:46106034-46105684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 164
               

               Conread position:
               62-415
               

               Cow position:
               chr7:11011838-11011471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 108
               

               Conread position:
               62-416
               

               Cow position:
               chr7:61824002-61823632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 23
               

               Conread position:
               62-419
               

               Cow position:
               chr7:44589991-44589649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 23
               

               Conread position:
               63-205
               

               Cow position:
               chr7:27359619-27359475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               125, 21
               

               Conread position:
               63-220
               

               Cow position:
               chr7:15654221-15654060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 47
               

               Conread position:
               63-271
               

               Cow position:
               chr7:20469338-20469544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               122, 24
               

               Conread position:
               63-282
               

               Cow position:
               chr7:49942571-49942352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               23, 35
               

               Conread position:
               63-317
               

               Cow position:
               chr7:18303043-18302786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               74, 79
               

               Conread position:
               63-336
               

               Cow position:
               chr7:68516826-68516562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               63-337
               

               Cow position:
               chr7:29088313-29088573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               23, 108
               

               Conread position:
               63-345
               

               Cow position:
               chr7:27990827-27990542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               74, 79
               

               Conread position:
               63-351
               

               Cow position:
               chr7:36533887-36534168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               203, 21
               

               Conread position:
               63-351
               

               Cow position:
               chr7:58863028-58862739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 22
               

               Conread position:
               63-355
               

               Cow position:
               chr7:46857105-46856814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               63-356
               

               Cow position:
               chr7:1761573-1761881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 22
               

               Conread position:
               63-356
               

               Cow position:
               chr7:2579389-2579087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 41
               

               Conread position:
               63-356
               

               Cow position:
               chr7:4720380-4720081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 229
               

               Conread position:
               63-356
               

               Cow position:
               chr7:11958576-11958289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 23
               

               Conread position:
               63-363
               

               Cow position:
               chr7:50371966-50372250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               87, 22
               

               Conread position:
               63-368
               

               Cow position:
               chr7:22651971-22651668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               235
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               61, 22
               

               Conread position:
               63-370
               

               Cow position:
               chr7:19230651-19230347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               229
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               73, 22
               

               Conread position:
               63-370
               

               Cow position:
               chr7:48714703-48715018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 228
               

               Conread position:
               64-265
               

               Cow position:
               chr7:63771758-63771962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               24, 160
               

               Conread position:
               64-351
               

               Cow position:
               chr7:39155429-39155723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               17, 33
               

               Conread position:
               64-351
               

               Cow position:
               chr7:42593417-42593126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               119, 21
               

               Conread position:
               64-364
               

               Cow position:
               chr7:39930153-39930435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 18
               

               Conread position:
               64-379
               

               Cow position:
               chr7:47172853-47172549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               64-415
               

               Cow position:
               chr7:52784947-52784587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 106
               

               Conread position:
               65-277
               

               Cow position:
               chr7:36746177-36746400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 30
               

               Conread position:
               65-280
               

               Cow position:
               chr7:58975371-58975590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               20, 12
               

               Conread position:
               65-281
               

               Cow position:
               chr7:26665701-26665481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               20, 179
               

               Conread position:
               65-315
               

               Cow position:
               chr7:1366597-1366343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 143
               

               Conread position:
               65-316
               

               Cow position:
               chr7:193819-193565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 224
               

               Conread position:
               65-316
               

               Cow position:
               chr7:1032657-1032403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 143
               

               Conread position:
               65-316
               

               Cow position:
               chr7:8139986-8139731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               20, 143
               

               Conread position:
               65-316
               

               Cow position:
               chr7:58959656-58959911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               19, 143
               

               Conread position:
               65-319
               

               Cow position:
               chr7:4418609-4418348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               20, 212
               

               Conread position:
               65-319
               

               Cow position:
               chr7:59775401-59775659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 143
               

               Conread position:
               65-319
               

               Cow position:
               chr7:68956528-68956786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               71, 172
               

               Conread position:
               65-327
               

               Cow position:
               chr7:18858198-18858457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 157
               

               Conread position:
               65-336
               

               Cow position:
               chr7:27127508-27127231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 143
               

               Conread position:
               65-336
               

               Cow position:
               chr7:32277402-32277665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 79
               

               Conread position:
               65-336
               

               Cow position:
               chr7:39129735-39129479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 16
               

               Conread position:
               65-336
               

               Cow position:
               chr7:68315104-68315365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               65-355
               

               Cow position:
               chr7:10000-10298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               65-355
               

               Cow position:
               chr7:24667249-24667528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               263, 19
               

               Conread position:
               65-363
               

               Cow position:
               chr7:11872741-11872448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               20, 127
               

               Conread position:
               65-367
               

               Cow position:
               chr7:48205242-48204942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               20, 91
               

               Conread position:
               65-367
               

               Cow position:
               chr7:49648221-49648519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 43
               

               Conread position:
               65-419
               

               Cow position:
               chr7:2897018-2897386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               273
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               66-220
               

               Cow position:
               chr7:10942997-10942834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               66-231
               

               Cow position:
               chr7:51249015-51248841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               66-257
               

               Cow position:
               chr7:16666137-16666327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               20, 61
               

               Conread position:
               66-265
               

               Cow position:
               chr7:21573140-21573351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               66-275
               

               Cow position:
               chr7:69054409-69054615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               123, 18
               

               Conread position:
               66-284
               

               Cow position:
               chr7:34716102-34716321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               19, 146
               

               Conread position:
               66-310
               

               Cow position:
               chr7:14542197-14541967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               66-324
               

               Cow position:
               chr7:8826675-8826930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               66-329
               

               Cow position:
               chr7:14632235-14632486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               115, 23
               

               Conread position:
               66-336
               

               Cow position:
               chr7:59843897-59843621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               19, 43
               

               Conread position:
               66-356
               

               Cow position:
               chr7:34974169-34974459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 59
               

               Conread position:
               66-362
               

               Cow position:
               chr7:21122402-21122103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               18, 42
               

               Conread position:
               66-364
               

               Cow position:
               chr7:50566356-50566043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               19, 148
               

               Conread position:
               66-366
               

               Cow position:
               chr7:45157981-45158289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 19
               

               Conread position:
               66-379
               

               Cow position:
               chr7:34554118-34554434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 221
               

               Conread position:
               66-420
               

               Cow position:
               chr7:27388124-27387752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               263
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               67-263
               

               Cow position:
               chr7:40579360-40579553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               18, 137
               

               Conread position:
               67-263
               

               Cow position:
               chr7:40671494-40671698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               18, 161
               

               Conread position:
               67-310
               

               Cow position:
               chr7:39790311-39790061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               17, 226
               

               Conread position:
               67-323
               

               Cow position:
               chr7:4582873-4582613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 159
               

               Conread position:
               67-324
               

               Cow position:
               chr7:8785825-8786069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               114, 17
               

               Conread position:
               67-325
               

               Cow position:
               chr7:53552086-53551823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               17, 93
               

               Conread position:
               67-331
               

               Cow position:
               chr7:23624790-23624543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 18
               

               Conread position:
               67-349
               

               Cow position:
               chr7:38263529-38263815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               67-356
               

               Cow position:
               chr7:4129925-4129630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 223
               

               Conread position:
               68-316
               

               Cow position:
               chr7:40510495-40510751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               17, 226
               

               Conread position:
               68-325
               

               Cow position:
               chr7:9781871-9781607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 149
               

               Conread position:
               69-224
               

               Cow position:
               chr7:32478455-32478610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               90, 70
               

               Conread position:
               69-273
               

               Cow position:
               chr7:5300530-5300326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               67, 16
               

               Conread position:
               69-371
               

               Cow position:
               chr7:23131458-23131756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               17, 220
               

               Conread position:
               70-265
               

               Cow position:
               chr7:7553404-7553200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               70-304
               

               Cow position:
               chr7:34979242-34979478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 57
               

               Conread position:
               70-323
               

               Cow position:
               chr7:5723558-5723818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               15, 122
               

               Conread position:
               70-325
               

               Cow position:
               chr7:31503712-31503964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 151
               

               Conread position:
               70-334
               

               Cow position:
               chr7:25960322-25960593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 160
               

               Conread position:
               70-336
               

               Cow position:
               chr7:14518619-14518352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               15, 128
               

               Conread position:
               71-419
               

               Cow position:
               chr7:34412411-34412062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 14
               

               Conread position:
               72-247
               

               Cow position:
               chr7:24146504-24146683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 164
               

               Conread position:
               72-327
               

               Cow position:
               chr7:3304429-3304696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               9, 94
               

               Conread position:
               72-333
               

               Cow position:
               chr7:34214459-34214717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               202
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               72-333
               

               Cow position:
               chr7:51063147-51063415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               10, 155
               

               Conread position:
               72-337
               

               Cow position:
               chr7:43711079-43711344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               10, 84
               

               Conread position:
               72-349
               

               Cow position:
               chr7:1721108-1720828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               70, 142
               

               Conread position:
               72-356
               

               Cow position:
               chr7:15569903-15570188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 7
               
UCSC Genome Browser
               Conread position:
               72-377
               

               Cow position:
               chr7:47547266-47547579 (view  custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 221
               
UCSC Genome Browser
               
               
               
Conread position: 73-334

               
               
               
Cow position: chr7:32093113-32093377 (view  custom track)

               
               
               
Alignm length: 271

               
               
               
Alignm identity: 185

               
               
               
Alignm E-value: 1e-26

               
               
               
Alignm gaps (pig, cow): 63, 13
UCSC Genome Browser
               
               
               
Conread position: 73-379

               
               
               
Cow position: chr7:49417467-49417787 (view  custom track)

               
               
               
Alignm length: 324

               
               
               
Alignm identity: 235

               
               
               
Alignm E-value: 0

               
               
               
Alignm gaps (pig, cow): 110, 13

               
               
               Conread position:74-215
               
               
               Cow position:chr7:6036335-6036471 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:109
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):11, 48

               
               
               Conread position:74-282
               
               
               Cow position:chr7:21197516-21197305 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:155
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):11, 81

               
               
               Conread position:74-324
               
               
               Cow position:chr7:11783568-11783312 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):69, 15

               
               
               Conread position:74-325
               
               
               Cow position:chr7:45709342-45709087 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:177
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):11, 210

               
               
               Conread position:74-335
               
               
               Cow position:chr7:53744037-53743773 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:181
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):11, 220

               
               
               Conread position:74-337
               
               
               Cow position:chr7:59558296-59558047 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:207
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):13, 36

               
               
               Conread position:75-327
               
               
               Cow position:chr7:52536386-52536134 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):10, 34

               
               
               Conread position:76-356
               
               
               Cow position:chr7:25872963-25873249 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:198
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):34, 146

               
               
               Conread position:76-419
               
               
               Cow position:chr7:56098476-56098811 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:351
               
               
               Alignm identity:232
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):105, 75

               
               
               Conread position:77-281
               
               
               Cow position:chr7:65978063-65978267 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:149
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):8, 130

               
               
               Conread position:77-282
               
               
               Cow position:chr7:60121377-60121603 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:169
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):8, 0

               
               
               Conread position:77-309
               
               
               Cow position:chr7:32316763-32316996 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:176
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):23, 33

               
               
               Conread position:77-316
               
               
               Cow position:chr7:45084961-45084719 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:163
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):60, 177

               
               
               Conread position:77-325
               
               
               Cow position:chr7:55085521-55085773 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:189
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):8, 136

               
               
               Conread position:77-354
               
               
               Cow position:chr7:25685172-25684902 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:194
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):8, 204

               
               
               Conread position:77-368
               
               
               Cow position:chr7:40074546-40074845 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:232
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):7, 38

               
               
               Conread position:78-377
               
               
               Cow position:chr7:63968349-63968023 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:229
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):37, 32

               
               
               Conread position:79-227
               
               
               Cow position:chr7:8316613-8316468 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:115
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):5, 62

               
               
               Conread position:79-325
               
               
               Cow position:chr7:21166380-21166125 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:187
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):6, 216

               
               
               Conread position:79-327
               
               
               Cow position:chr7:37364663-37364908 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:168
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):6, 207

               
               
               Conread position:79-342
               
               
               Cow position:chr7:8272526-8272797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:220
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):6, 150

               
               
               Conread position:79-353
               
               
               Cow position:chr7:60547802-60547519 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:209
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):58, 34

               
               
               Conread position:79-379
               
               
               Cow position:chr7:48667293-48667587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:237
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):5, 43

               
               
               Conread position:81-275
               
               
               Cow position:chr7:23641085-23640887 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:156
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):55, 139

               
               
               Conread position:82-275
               
               
               Cow position:chr7:27551311-27551113 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):54, 69

               
               
               Conread position:82-322
               
               
               Cow position:chr7:10369308-10369068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:174
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):55, 126

               
               
               Conread position:83-215
               
               
               Cow position:chr7:29849109-29849243 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:109
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):53, 76

               
               
               Conread position:83-233
               
               
               Cow position:chr7:14712326-14712172 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):99, 26

               
               
               Conread position:83-265
               
               
               Cow position:chr7:43450121-43450308 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:140
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):56, 47

               
               
               Conread position:83-302
               
               
               Cow position:chr7:50108408-50108185 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:158
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):77, 184

               
               
               Conread position:83-303
               
               
               Cow position:chr7:37777953-37777726 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):53, 32

               
               
               Conread position:83-325
               
               
               Cow position:chr7:5052686-5052452 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:171
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):53, 76

               
               
               Conread position:83-325
               
               
               Cow position:chr7:43333705-43333952 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):56, 213

               
               
               Conread position:83-325
               
               
               Cow position:chr7:47414137-47414379 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:183
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):43, 130

               
               
               Conread position:83-325
               
               
               Cow position:chr7:48008023-48008257 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:170
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):54, 43

               
               
               Conread position:83-336
               
               
               Cow position:chr7:23090257-23090018 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:199
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):13, 46

               
               
               Conread position:83-336
               
               
               Cow position:chr7:36830534-36830780 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:184
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):81, 30

               
               
               Conread position:83-348
               
               
               Cow position:chr7:25415271-25415535 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:194
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):57, 121

               
               
               Conread position:83-354
               
               
               Cow position:chr7:6041852-6042120 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:211
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):108, 12

               
               
               Conread position:83-356
               
               
               Cow position:chr7:3256481-3256195 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:224
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):98, 165

               
               
               Conread position:83-356
               
               
               Cow position:chr7:9136706-9136988 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:231
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):102, 209

               
               
               Conread position:83-356
               
               
               Cow position:chr7:63946707-63946436 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:223
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):97, 24

               
               
               Conread position:83-361
               
               
               Cow position:chr7:26485455-26485727 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:223
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):110, 25

               
               
               Conread position:83-363
               
               
               Cow position:chr7:12202051-12201755 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:227
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):59, 143

               
               
               Conread position:83-368
               
               
               Cow position:chr7:59688408-59688700 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:227
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):59, 210

               
               
               Conread position:83-379
               
               
               Cow position:chr7:23251685-23251400 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:235
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):102, 25

               
               
               Conread position:83-416
               
               
               Cow position:chr7:14174542-14174204 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:352
               
               
               Alignm identity:261
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):81, 128

               
               
               Conread position:83-419
               
               
               Cow position:chr7:43215385-43215737 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:359
               
               
               Alignm identity:244
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):72, 60

               
               
               Conread position:84-282
               
               
               Cow position:chr7:43411252-43411452 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):55, 137

               
               
               Conread position:84-303
               
               
               Cow position:chr7:8375146-8375362 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:168
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):121, 178

               
               
               Conread position:84-326
               
               
               Cow position:chr7:22880146-22880390 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:160
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):72, 208

               
               
               Conread position:85-283
               
               
               Cow position:chr7:37184241-37184435 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:148
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):51, 119

               
               
               Conread position:85-338
               
               
               Cow position:chr7:48020294-48020557 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:213
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):21, 136

               
               
               Conread position:85-413
               
               
               Cow position:chr7:45747965-45747639 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:243
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):99, 14

               
               
               Conread position:86-331
               
               
               Cow position:chr7:50772859-50772608 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:183
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):49, 140

               
               
               Conread position:86-368
               
               
               Cow position:chr7:62610186-62610449 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:196
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):74, 57

               
               
               Conread position:87-325
               
               
               Cow position:chr7:34428447-34428693 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:186
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):23, 130

               
               
               Conread position:87-335
               
               
               Cow position:chr7:25445272-25445524 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:176
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):96, 202

               
               
               Conread position:87-336
               
               
               Cow position:chr7:7106909-7106655 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:181
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):98, 193

               
               
               Conread position:87-336
               
               
               Cow position:chr7:23636584-23636832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:205
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):97, 54

               
               
               Conread position:87-355
               
               
               Cow position:chr7:53806942-53806674 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:200
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):44, 90

               
               
               Conread position:87-356
               
               
               Cow position:chr7:18188345-18188079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):128, 176

               
               
               Conread position:87-356
               
               
               Cow position:chr7:49903652-49903922 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:205
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):120, 198

               
               
               Conread position:87-375
               
               
               Cow position:chr7:48358882-48359176 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:206
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):50, 132

               
               
               Conread position:87-377
               
               
               Cow position:chr7:17782800-17782521 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:212
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):215, 22

               
               
               Conread position:87-414
               
               
               Cow position:chr7:66266708-66266368 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:349
               
               
               Alignm identity:229
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):49, 57

               
               
               Conread position:87-420
               
               
               Cow position:chr7:40192617-40192973 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:359
               
               
               Alignm identity:239
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):19, 165

               
               
               Conread position:88-275
               
               
               Cow position:chr7:41392852-41393043 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:146
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):98, 51

               
               
               Conread position:88-351
               
               
               Cow position:chr7:14520165-14519896 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:205
               
               
               Alignm E-value:8.99634e-43
               
               
               Alignm gaps (pig, cow):48, 11

               
               
               Conread position:89-265
               
               
               Cow position:chr7:28427889-28428066 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:135
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):47, 20

               
               
               Conread position:89-351
               
               
               Cow position:chr7:13593649-13593913 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:212
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):47, 19

               
               
               Conread position:90-246
               
               
               Cow position:chr7:7588590-7588431 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:125
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):134, 104

               
               
               Conread position:90-272
               
               
               Cow position:chr7:205627-205804 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):124, 0

               
               
               Conread position:90-368
               
               
               Cow position:chr7:51644540-51644811 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:214
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):11, 21

               
               
               Conread position:91-312
               
               
               Cow position:chr7:34017971-34018186 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:153
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):69, 48

               
               
               Conread position:91-334
               
               
               Cow position:chr7:38025703-38025951 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):45, 122

               
               
               Conread position:91-335
               
               
               Cow position:chr7:39140093-39140340 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:173
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):157, 103

               
               
               Conread position:91-356
               
               
               Cow position:chr7:32079334-32079601 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):95, 49

               
               
               Conread position:91-419
               
               
               Cow position:chr7:29027039-29027364 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:343
               
               
               Alignm identity:240
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):237, 8

               
               
               Conread position:92-278
               
               
               Cow position:chr7:12385029-12385217 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):73, 0

               
               
               Conread position:92-314
               
               
               Cow position:chr7:60761243-60761470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:162
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):67, 202

               
               
               Conread position:92-334
               
               
               Cow position:chr7:56347941-56347698 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):94, 9

               
               
               Conread position:92-348
               
               
               Cow position:chr7:48638449-48638717 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:198
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):46, 88

               
               
               Conread position:92-353
               
               
               Cow position:chr7:1376022-1376281 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:182
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):94, 194

               
               
               Conread position:92-356
               
               
               Cow position:chr7:34422387-34422122 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):88, 193

               
               
               Conread position:92-356
               
               
               Cow position:chr7:53772449-53772164 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:208
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):93, 211

               
               
               Conread position:92-364
               
               
               Cow position:chr7:39903971-39904253 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:216
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):16, 203

               
               
               Conread position:92-377
               
               
               Cow position:chr7:42296198-42295905 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:208
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):18, 134

               
               
               Conread position:92-414
               
               
               Cow position:chr7:255933-255610 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:248
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):18, 139

               
               
               Conread position:93-248
               
               
               Cow position:chr7:13296136-13295973 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:122
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):99, 0

               
               
               Conread position:93-258
               
               
               Cow position:chr7:33810565-33810732 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:135
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):50, 132

               
               
               Conread position:93-265
               
               
               Cow position:chr7:33804846-33805028 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:144
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):46, 15

               
               
               Conread position:93-282
               
               
               Cow position:chr7:39988285-39988481 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:146
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):55, 140

               
               
               Conread position:93-305
               
               
               Cow position:chr7:10099473-10099260 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:156
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):91, 15

               
               
               Conread position:93-317
               
               
               Cow position:chr7:47503537-47503767 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:170
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):92, 133

               
               
               Conread position:93-336
               
               
               Cow position:chr7:7507439-7507679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:169
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):42, 115

               
               
               Conread position:93-336
               
               
               Cow position:chr7:23177417-23177668 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:186
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):57, 68

               
               
               Conread position:93-336
               
               
               Cow position:chr7:31881559-31881789 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:186
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):90, 127

               
               
               Conread position:93-338
               
               
               Cow position:chr7:68909072-68909314 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:184
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):49, 14

               
               
               Conread position:93-342
               
               
               Cow position:chr7:40405731-40405981 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):44, 34

               
               
               Conread position:93-344
               
               
               Cow position:chr7:25703340-25703091 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:174
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):74, 18

               
               
               Conread position:93-347
               
               
               Cow position:chr7:52383093-52382837 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:192
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):88, 140

               
               
               Conread position:93-351
               
               
               Cow position:chr7:7506253-7505981 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:222
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):71, 0

               
               
               Conread position:93-355
               
               
               Cow position:chr7:16917934-16918198 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:193
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):42, 72

               
               
               Conread position:93-367
               
               
               Cow position:chr7:18508648-18508381 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:202
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):79, 46

               
               
               Conread position:93-370
               
               
               Cow position:chr7:47697900-47698171 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:211
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):123, 16

               
               
               Conread position:93-379
               
               
               Cow position:chr7:18247923-18247652 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:213
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):236, 71

               
               
               Conread position:93-417
               
               
               Cow position:chr7:24220552-24220891 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:265
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):49, 129

               
               
               Conread position:94-336
               
               
               Cow position:chr7:30017633-30017389 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):25, 7

               
               
               Conread position:94-336
               
               
               Cow position:chr7:53986109-53985868 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:176
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):62, 147

               
               
               Conread position:94-337
               
               
               Cow position:chr7:62630718-62630457 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:185
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):123, 86

               
               
               Conread position:95-222
               
               
               Cow position:chr7:53034439-53034303 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:106
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:95-248
               
               
               Cow position:chr7:35742522-35742360 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:127
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:95-282
               
               
               Cow position:chr7:60756653-60756459 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:143
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):46, 92

               
               
               Conread position:95-320
               
               
               Cow position:chr7:67816789-67817010 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:179
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):91, 45

               
               
               Conread position:95-329
               
               
               Cow position:chr7:63913981-63913763 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:170
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):63, 22

               
               
               Conread position:95-336
               
               
               Cow position:chr7:5212594-5212347 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:197
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):47, 131

               
               
               Conread position:95-336
               
               
               Cow position:chr7:18964809-18965038 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:170
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):235, 44

               
               
               Conread position:95-336
               
               
               Cow position:chr7:31694743-31694510 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:185
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):94, 44

               
               
               Conread position:95-337
               
               
               Cow position:chr7:11869952-11869710 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):49, 18

               
               
               Conread position:95-351
               
               
               Cow position:chr7:33697841-33698099 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:197
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):93, 14

               
               
               Conread position:95-351
               
               
               Cow position:chr7:47931915-47931651 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:201
               
               
               Alignm E-value:8.99634e-43
               
               
               Alignm gaps (pig, cow):47, 13

               
               
               Conread position:95-356
               
               
               Cow position:chr7:13963083-13963363 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:211
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):46, 205

               
               
               Conread position:95-356
               
               
               Cow position:chr7:15559576-15559837 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):114, 99

               
               
               Conread position:95-356
               
               
               Cow position:chr7:16022182-16022445 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):61, 122

               
               
               Conread position:95-358
               
               
               Cow position:chr7:51039307-51039583 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:205
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):46, 202

               
               
               Conread position:95-365
               
               
               Cow position:chr7:67839225-67839501 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:198
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):90, 151

               
               
               Conread position:95-368
               
               
               Cow position:chr7:58923280-58923560 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:220
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):47, 130

               
               
               Conread position:95-379
               
               
               Cow position:chr7:600220-600499 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:221
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):90, 45

               
               
               Conread position:95-379
               
               
               Cow position:chr7:26838540-26838836 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:213
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):47, 208

               
               
               Conread position:96-278
               
               
               Cow position:chr7:42460315-42460519 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:157
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:96-336
               
               
               Cow position:chr7:33385814-33386051 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:185
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):43, 17

               
               
               Conread position:97-304
               
               
               Cow position:chr7:10551091-10550873 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):39, 200

               
               
               Conread position:97-323
               
               
               Cow position:chr7:63378276-63378509 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:164
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):42, 119

               
               
               Conread position:97-334
               
               
               Cow position:chr7:20051578-20051347 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):45, 72

               
               
               Conread position:97-337
               
               
               Cow position:chr7:25496620-25496854 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:190
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):88, 112

               
               
               Conread position:97-356
               
               
               Cow position:chr7:5853247-5853498 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:197
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):79, 12

               
               
               Conread position:97-356
               
               
               Cow position:chr7:42894332-42894599 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:202
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):88, 114

               
               
               Conread position:97-368
               
               
               Cow position:chr7:15855428-15855170 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:205
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):89, 53

               
               
               Conread position:97-415
               
               
               Cow position:chr7:24767345-24767021 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:215
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):54, 64

               
               
               Conread position:97-416
               
               
               Cow position:chr7:37718434-37718757 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:130
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):293, 0

               
               
               Conread position:98-290
               
               
               Cow position:chr7:49783488-49783287 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:153
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):41, 197

               
               
               Conread position:98-301
               
               
               Cow position:chr7:41718519-41718716 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:148
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):41, 87

               
               
               Conread position:98-302
               
               
               Cow position:chr7:14353902-14353694 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:165
               
               
               Alignm E-value:6e-40
               
               
               Alignm gaps (pig, cow):84, 113

               
               
               Conread position:98-325
               
               
               Cow position:chr7:15616061-15616304 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:175
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):38, 205

               
               
               Conread position:99-281
               
               
               Cow position:chr7:48443873-48443689 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:145
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):83, 50

               
               
               Conread position:99-328
               
               
               Cow position:chr7:11854383-11854615 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:168
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):30, 108

               
               
               Conread position:99-367
               
               
               Cow position:chr7:46103412-46103683 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:187
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):82, 167

               
               
               Conread position:99-379
               
               
               Cow position:chr7:44596811-44596523 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:225
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):86, 138

               
               
               Conread position:100-249
               
               
               Cow position:chr7:19846258-19846106 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:127
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):81, 106

               
               
               Conread position:100-334
               
               
               Cow position:chr7:8809674-8809932 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:182
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:100-338
               
               
               Cow position:chr7:46327876-46327639 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:168
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):63, 19

               
               
               Conread position:100-371
               
               
               Cow position:chr7:32945963-32946233 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):228, 94

               
               
               Conread position:100-379
               
               
               Cow position:chr7:28544065-28544353 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:225
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):85, 111

               
               
               Conread position:100-414
               
               
               Cow position:chr7:13133801-13133491 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:236
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):25, 51

               
               
               Conread position:101-309
               
               
               Cow position:chr7:51638677-51638466 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:177
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):84, 148

               
               
               Conread position:101-325
               
               
               Cow position:chr7:39538111-39538341 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:171
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):38, 102

               
               
               Conread position:101-336
               
               
               Cow position:chr7:20147449-20147210 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:163
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):62, 138

               
               
               Conread position:101-336
               
               
               Cow position:chr7:32910435-32910665 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:182
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):39, 82

               
               
               Conread position:101-379
               
               
               Cow position:chr7:5199660-5199373 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:224
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):81, 132

               
               
               Conread position:102-243
               
               
               Cow position:chr7:58296997-58296851 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:123
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):86, 48

               
               
               Conread position:103-351
               
               
               Cow position:chr7:13228683-13228434 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):78, 15

               
               
               Conread position:103-419
               
               
               Cow position:chr7:42636873-42637193 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:235
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):82, 115

               
               
               Conread position:108-336
               
               
               Cow position:chr7:12424442-12424675 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:160
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):28, 137

               
               
               Conread position:109-336
               
               
               Cow position:chr7:35286742-35286511 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:181
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):33, 114

               
               
               Conread position:109-336
               
               
               Cow position:chr7:50900789-50900557 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:178
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):27, 84

               
               
               Conread position:109-349
               
               
               Cow position:chr7:61663082-61663327 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:177
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):37, 91

               
               
               Conread position:109-351
               
               
               Cow position:chr7:13067057-13067302 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:183
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):33, 116

               
               
               Conread position:109-354
               
               
               Cow position:chr7:61731991-61731744 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:180
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):29, 123

               
               
               Conread position:109-366
               
               
               Cow position:chr7:58351064-58350806 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:203
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):27, 174

               
               
               Conread position:109-407
               
               
               Cow position:chr7:48547964-48547671 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:218
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):51, 109

               
               
               Conread position:110-305
               
               
               Cow position:chr7:25286419-25286607 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:145
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):76, 30

               
               
               Conread position:110-323
               
               
               Cow position:chr7:40425417-40425197 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:165
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):29, 130

               
               
               Conread position:110-334
               
               
               Cow position:chr7:53579494-53579265 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):32, 108

               
               
               Conread position:110-336
               
               
               Cow position:chr7:41745575-41745337 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:185
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):34, 187

               
               
               Conread position:113-370
               
               
               Cow position:chr7:1792559-1792285 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:214
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):15, 188

               
               
               Conread position:114-257
               
               
               Cow position:chr7:19845610-19845474 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:115
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):27, 56

               
               
               Conread position:114-279
               
               
               Cow position:chr7:58427981-58428151 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:132
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):28, 55

               
               
               Conread position:114-282
               
               
               Cow position:chr7:44942356-44942530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:139
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):27, 112

               
               
               Conread position:114-297
               
               
               Cow position:chr7:58953582-58953764 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:144
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):72, 25

               
               
               Conread position:114-330
               
               
               Cow position:chr7:47046368-47046572 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:164
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):9, 102

               
               
               Conread position:114-348
               
               
               Cow position:chr7:26861215-26861464 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:195
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):10, 26

               
               
               Conread position:114-351
               
               
               Cow position:chr7:36247997-36248242 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):27, 59

               
               
               Conread position:114-351
               
               
               Cow position:chr7:39164285-39164536 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:176
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):29, 182

               
               
               Conread position:117-336
               
               
               Cow position:chr7:51632811-51633028 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:160
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):50, 67

               
               
               Conread position:117-370
               
               
               Cow position:chr7:9926824-9926565 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:194
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):111, 169

               
               
               Conread position:118-325
               
               
               Cow position:chr7:57829132-57829341 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:152
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):18, 94

               
               
               Conread position:118-337
               
               
               Cow position:chr7:39472610-39472386 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:167
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):47, 173

               
               
               Conread position:119-280
               
               
               Cow position:chr7:27290624-27290449 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:134
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:119-286
               
               
               Cow position:chr7:22938311-22938470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:132
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):23, 56

               
               
               Conread position:119-356
               
               
               Cow position:chr7:10381712-10381950 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:181
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):69, 10

               
               
               Conread position:120-238
               
               
               Cow position:chr7:43784516-43784643 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:128
               
               
               Alignm identity:103
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:120-331
               
               
               Cow position:chr7:47830374-47830162 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):75, 97

               
               
               Conread position:121-335
               
               
               Cow position:chr7:43484626-43484401 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:164
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):67, 9

               
               
               Conread position:121-354
               
               
               Cow position:chr7:63707394-63707169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:174
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):208, 65

               
               
               Conread position:121-355
               
               
               Cow position:chr7:15534162-15533926 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:178
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):54, 77

               
               
               Conread position:121-356
               
               
               Cow position:chr7:32807375-32807598 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:168
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):11, 19

               
               
               Conread position:122-248
               
               
               Cow position:chr7:13095635-13095762 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:128
               
               
               Alignm identity:110
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:122-282
               
               
               Cow position:chr7:4512903-4512736 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:121
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:122-324
               
               
               Cow position:chr7:37435156-37435359 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:144
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):66, 84

               
               
               Conread position:122-336
               
               
               Cow position:chr7:14450252-14450454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:173
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):61, 87

               
               
               Conread position:122-361
               
               
               Cow position:chr7:12358173-12357944 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:182
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):20, 55

               
               
               Conread position:123-249
               
               
               Cow position:chr7:23616055-23615928 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:134
               
               
               Alignm identity:108
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):15, 98

               
               
               Conread position:123-362
               
               
               Cow position:chr7:21009026-21008778 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):51, 75

               
               
               Conread position:124-308
               
               
               Cow position:chr7:51673665-51673479 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:150
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):22, 102

               
               
               Conread position:124-325
               
               
               Cow position:chr7:61778758-61778967 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:155
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):17, 171

               
               
               Conread position:124-339
               
               
               Cow position:chr7:69132865-69133082 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:172
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):18, 151

               
               
               Conread position:126-351
               
               
               Cow position:chr7:8658429-8658660 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):62, 161

               
               
               Conread position:127-320
               
               
               Cow position:chr7:52209134-52208929 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:149
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):53, 31

               
               
               Conread position:127-346
               
               
               Cow position:chr7:8102338-8102560 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:174
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):54, 84

               
               
               Conread position:127-356
               
               
               Cow position:chr7:32260285-32260045 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:176
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):54, 77

               
               
               Conread position:128-379
               
               
               Cow position:chr7:41104639-41104376 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:193
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):85, 16

               
               
               Conread position:129-273
               
               
               Cow position:chr7:31881872-31882019 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:123
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):57, 11

               
               
               Conread position:129-338
               
               
               Cow position:chr7:52550730-52550930 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:157
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):15, 11

               
               
               Conread position:129-364
               
               
               Cow position:chr7:60869866-60870101 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:188
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):44, 93

               
               
               Conread position:130-258
               
               
               Cow position:chr7:31675952-31675823 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:130
               
               
               Alignm identity:105
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):12, 0

               
               
               Conread position:130-331
               
               
               Cow position:chr7:8110331-8110127 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):7, 96

               
               
               Conread position:130-336
               
               
               Cow position:chr7:41913772-41913570 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:146
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):19, 27

               
               
               Conread position:130-354
               
               
               Cow position:chr7:35300500-35300269 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:170
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):50, 109

               
               
               Conread position:130-356
               
               
               Cow position:chr7:9161749-9161525 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):11, 87

               
               
               Conread position:130-356
               
               
               Cow position:chr7:50857868-50858103 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:179
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):61, 103

               
               
               Conread position:131-336
               
               
               Cow position:chr7:68857665-68857459 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:165
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):11, 21

               
               
               Conread position:131-337
               
               
               Cow position:chr7:53606401-53606203 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:166
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):57, 9

               
               
               Conread position:131-360
               
               
               Cow position:chr7:20411607-20411371 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):55, 9

               
               
               Conread position:132-351
               
               
               Cow position:chr7:39094004-39093781 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:173
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):45, 103

               
               
               Conread position:133-416
               
               
               Cow position:chr7:10599755-10599453 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:222
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):49, 24

               
               
               Conread position:134-336
               
               
               Cow position:chr7:65315144-65315354 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:156
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):56, 126

               
               
               Conread position:134-356
               
               
               Cow position:chr7:36774290-36774518 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:181
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):49, 144

               
               
               Conread position:134-370
               
               
               Cow position:chr7:29682524-29682285 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:175
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):194, 151

               
               
               Conread position:134-370
               
               
               Cow position:chr7:40308592-40308354 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):52, 91

               
               
               Conread position:135-292
               
               
               Cow position:chr7:41259516-41259360 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:123
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):47, 86

               
               
               Conread position:135-334
               
               
               Cow position:chr7:57518008-57518204 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):195, 7

               
               
               Conread position:135-336
               
               
               Cow position:chr7:27472882-27472666 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:163
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):49, 7

               
               
               Conread position:135-348
               
               
               Cow position:chr7:33298519-33298302 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:159
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):51, 129

               
               
               Conread position:135-354
               
               
               Cow position:chr7:60732715-60732490 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:166
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):48, 157

               
               
               Conread position:135-379
               
               
               Cow position:chr7:39823672-39823427 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:195
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):51, 20

               
               
               Conread position:135-420
               
               
               Cow position:chr7:535780-535498 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:200
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):193, 59

               
               
               Conread position:139-379
               
               
               Cow position:chr7:9449722-9449482 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:180
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):41, 78

               
               
               Conread position:140-262
               
               
               Cow position:chr7:17381081-17381212 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:132
               
               
               Alignm identity:105
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:140-282
               
               
               Cow position:chr7:18253431-18253576 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:119
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):44, 88

               
               
               Conread position:140-336
               
               
               Cow position:chr7:63679007-63679201 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):46, 91

               
               
               Conread position:140-347
               
               
               Cow position:chr7:2816201-2816401 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):45, 81

               
               
               Conread position:142-349
               
               
               Cow position:chr7:24460890-24461093 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):44, 81

               
               
               Conread position:142-356
               
               
               Cow position:chr7:14938341-14938130 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):41, 119

               
               
               Conread position:143-327
               
               
               Cow position:chr7:13835973-13836154 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:142
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):41, 55

               
               
               Conread position:144-351
               
               
               Cow position:chr7:49783037-49782829 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:149
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):119, 17

               
               
               Conread position:144-356
               
               
               Cow position:chr7:428849-428632 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:156
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):20, 145

               
               
               Conread position:145-323
               
               
               Cow position:chr7:8735764-8735932 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:137
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:145-334
               
               
               Cow position:chr7:27062711-27062900 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):38, 65

               
               
               Conread position:146-337
               
               
               Cow position:chr7:36856479-36856665 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:145
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):38, 63

               
               
               Conread position:146-356
               
               
               Cow position:chr7:54054523-54054736 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:166
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):40, 85

               
               
               Conread position:146-416
               
               
               Cow position:chr7:63121477-63121203 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:200
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):76, 60

               
               
               Conread position:147-327
               
               
               Cow position:chr7:19221505-19221686 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:141
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):11, 139

               
               
               Conread position:147-351
               
               
               Cow position:chr7:52758412-52758615 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:163
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):21, 77

               
               
               Conread position:147-379
               
               
               Cow position:chr7:4811959-4812201 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:195
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):37, 76

               
               
               Conread position:147-395
               
               
               Cow position:chr7:50165968-50166219 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):30, 15

               
               
               Conread position:148-325
               
               
               Cow position:chr7:48695896-48696072 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:137
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):40, 75

               
               
               Conread position:148-354
               
               
               Cow position:chr7:18288331-18288122 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:157
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):33, 128

               
               
               Conread position:149-336
               
               
               Cow position:chr7:39131552-39131370 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):179, 75

               
               
               Conread position:149-355
               
               
               Cow position:chr7:29121840-29122049 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):36, 76

               
               
               Conread position:150-325
               
               
               Cow position:chr7:41615049-41614864 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):36, 146

               
               
               Conread position:150-364
               
               
               Cow position:chr7:33719973-33720191 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:185
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):36, 84

               
               
               Conread position:150-368
               
               
               Cow position:chr7:168729-168505 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:180
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):30, 141

               
               
               Conread position:151-337
               
               
               Cow position:chr7:32221995-32222195 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:151
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):26, 147

               
               
               Conread position:152-325
               
               
               Cow position:chr7:41111942-41111760 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:135
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):34, 73

               
               
               Conread position:153-322
               
               
               Cow position:chr7:13218199-13218034 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:137
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):33, 66

               
               
               Conread position:154-349
               
               
               Cow position:chr7:37466452-37466655 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:156
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):32, 149

               
               
               Conread position:155-313
               
               
               Cow position:chr7:44208895-44209058 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:119
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):31, 136

               
               
               Conread position:157-351
               
               
               Cow position:chr7:7535480-7535684 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:154
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):29, 142

               
               
               Conread position:158-351
               
               
               Cow position:chr7:61601361-61601171 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):170, 49

               
               
               Conread position:159-336
               
               
               Cow position:chr7:18947797-18947618 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:151
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):27, 64

               
               
               Conread position:160-336
               
               
               Cow position:chr7:9108410-9108593 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):26, 132

               
               
               Conread position:160-382
               
               
               Cow position:chr7:33913918-33914145 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:171
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):26, 141

               
               
               Conread position:161-335
               
               
               Cow position:chr7:49371150-49370977 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:127
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):63, 80

               
               
               Conread position:162-323
               
               
               Cow position:chr7:6822932-6823090 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:117
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):20, 0

               
               
               Conread position:163-335
               
               
               Cow position:chr7:8821424-8821602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):23, 128

               
               
               Conread position:164-329
               
               
               Cow position:chr7:39838920-39838761 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:123
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:164-331
               
               
               Cow position:chr7:56615622-56615791 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:127
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):58, 123

               
               
               Conread position:164-356
               
               
               Cow position:chr7:11549624-11549813 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:148
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):164, 55

               
               
               Conread position:164-368
               
               
               Cow position:chr7:38429752-38429548 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:157
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):84, 55

               
               
               Conread position:164-368
               
               
               Cow position:chr7:56886550-56886348 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:158
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):165, 49

               
               
               Conread position:164-395
               
               
               Cow position:chr7:26263700-26263461 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):57, 126

               
               
               Conread position:165-356
               
               
               Cow position:chr7:40305296-40305103 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:137
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):72, 13

               
               
               Conread position:167-336
               
               
               Cow position:chr7:50493954-50494124 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:126
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):54, 118

               
               
               Conread position:167-363
               
               
               Cow position:chr7:52517289-52517483 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):52, 21

               
               
               Conread position:167-378
               
               
               Cow position:chr7:9374563-9374344 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:154
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):51, 133

               
               
               Conread position:170-420
               
               
               Cow position:chr7:56081562-56081812 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):160, 24

               
               
               Conread position:171-377
               
               
               Cow position:chr7:8089127-8089336 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:164
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):52, 116

               
               
               Conread position:172-336
               
               
               Cow position:chr7:25785806-25785968 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:132
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):45, 10

               
               
               Conread position:172-360
               
               
               Cow position:chr7:24168483-24168664 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:146
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):156, 34

               
               
               Conread position:172-368
               
               
               Cow position:chr7:37498229-37498031 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:140
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):93, 113

               
               
               Conread position:172-395
               
               
               Cow position:chr7:62542627-62542858 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:165
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):99, 10

               
               
               Conread position:173-329
               
               
               Cow position:chr7:31700449-31700304 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:123
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):16, 48

               
               
               Conread position:173-356
               
               
               Cow position:chr7:41103460-41103640 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:136
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):156, 25

               
               
               Conread position:173-379
               
               
               Cow position:chr7:5885140-5885326 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:155
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:173-379
               
               
               Cow position:chr7:12468831-12469035 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:150
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):149, 46

               
               
               Conread position:174-321
               
               
               Cow position:chr7:32404773-32404627 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:115
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):74, 50

               
               
               Conread position:174-347
               
               
               Cow position:chr7:8044506-8044328 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:129
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):36, 114

               
               
               Conread position:174-356
               
               
               Cow position:chr7:14316911-14317092 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:140
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):155, 8

               
               
               Conread position:177-336
               
               
               Cow position:chr7:49630151-49630306 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):153, 17

               
               
               Conread position:179-354
               
               
               Cow position:chr7:61699722-61699545 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:137
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):150, 103

               
               
               Conread position:179-368
               
               
               Cow position:chr7:23761946-23762136 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:145
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):34, 106

               
               
               Conread position:179-384
               
               
               Cow position:chr7:24928046-24927844 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:156
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):142, 32

               
               
               Conread position:179-395
               
               
               Cow position:chr7:29505087-29505302 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:180
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):151, 103

               
               
               Conread position:180-325
               
               
               Cow position:chr7:53202685-53202829 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:113
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):27, 42

               
               
               Conread position:180-328
               
               
               Cow position:chr7:36317159-36317303 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:117
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:180-336
               
               
               Cow position:chr7:44621019-44620868 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:122
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):34, 0

               
               
               Conread position:180-349
               
               
               Cow position:chr7:598217-598387 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:122
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):149, 104

               
               
               Conread position:180-370
               
               
               Cow position:chr7:9185638-9185836 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:148
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):29, 16

               
               
               Conread position:181-336
               
               
               Cow position:chr7:9861794-9861638 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:128
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):32, 113

               
               
               Conread position:182-336
               
               
               Cow position:chr7:15739605-15739457 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:124
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):25, 0

               
               
               Conread position:182-337
               
               
               Cow position:chr7:10759737-10759582 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:124
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):129, 46

               
               
               Conread position:182-355
               
               
               Cow position:chr7:43296884-43297059 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):25, 112

               
               
               Conread position:182-362
               
               
               Cow position:chr7:35245613-35245432 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:143
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):31, 89

               
               
               Conread position:183-323
               
               
               Cow position:chr7:35642605-35642470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:107
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):24, 0

               
               
               Conread position:183-370
               
               
               Cow position:chr7:32693050-32692865 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):141, 76

               
               
               Conread position:186-308
               
               
               Cow position:chr7:63016211-63016334 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:125
               
               
               Alignm identity:106
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):27, 100

               
               
               Conread position:186-351
               
               
               Cow position:chr7:41347052-41346888 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):142, 37

               
               
               Conread position:186-356
               
               
               Cow position:chr7:23464242-23464405 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:134
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):144, 18

               
               
               Conread position:186-356
               
               
               Cow position:chr7:28441159-28441328 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:129
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):142, 10

               
               
               Conread position:187-336
               
               
               Cow position:chr7:25393285-25393429 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:123
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):140, 64

               
               
               Conread position:188-349
               
               
               Cow position:chr7:49636234-49636074 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):140, 31

               
               
               Conread position:188-349
               
               
               Cow position:chr7:49745439-49745599 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):140, 31

               
               
               Conread position:188-356
               
               
               Cow position:chr7:39947263-39947099 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):142, 32

               
               
               Conread position:189-329
               
               
               Cow position:chr7:30818439-30818585 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:123
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):28, 102

               
               
               Conread position:189-351
               
               
               Cow position:chr7:39167857-39168026 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:128
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):27, 6

               
               
               Conread position:189-356
               
               
               Cow position:chr7:55316214-55316052 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:127
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):139, 29

               
               
               Conread position:190-337
               
               
               Cow position:chr7:19414466-19414321 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:123
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):138, 27

               
               
               Conread position:190-339
               
               
               Cow position:chr7:20781496-20781640 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:115
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):138, 21

               
               
               Conread position:191-368
               
               
               Cow position:chr7:43307155-43307337 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:133
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):16, 101

               
               
               Conread position:191-379
               
               
               Cow position:chr7:37003804-37003977 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:146
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):139, 5

               
               
               Conread position:193-377
               
               
               Cow position:chr7:23677916-23678098 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:135
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):135, 28

               
               
               Conread position:194-377
               
               
               Cow position:chr7:29345915-29345732 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):134, 41

               
               
               Conread position:195-388
               
               
               Cow position:chr7:32884152-32884343 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:140
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):22, 92

               
               
               Conread position:197-383
               
               
               Cow position:chr7:9175467-9175660 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:145
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):131, 87

               
               
               Conread position:199-351
               
               
               Cow position:chr7:6469614-6469766 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:114
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):130, 19

               
               
               Conread position:202-351
               
               
               Cow position:chr7:29863744-29863894 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:120
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):16, 51

               
               
               Conread position:203-336
               
               
               Cow position:chr7:6116369-6116236 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:114
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):124, 81

               
               
               Conread position:203-336
               
               
               Cow position:chr7:24869649-24869519 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:134
               
               
               Alignm identity:106
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:203-368
               
               
               Cow position:chr7:2894723-2894888 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:132
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):126, 59

               
               
               Conread position:204-356
               
               
               Cow position:chr7:11487677-11487524 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:119
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):18, 82

               
               
               Conread position:204-356
               
               
               Cow position:chr7:56557151-56556997 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:118
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):9, 82

               
               
               Conread position:204-379
               
               
               Cow position:chr7:14486071-14486248 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):14, 71

               
               
               Conread position:206-349
               
               
               Cow position:chr7:58330831-58330687 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:109
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):14, 80

               
               
               Conread position:206-368
               
               
               Cow position:chr7:12488431-12488596 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:135
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):11, 79

               
               
               Conread position:207-351
               
               
               Cow position:chr7:9078957-9079099 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:111
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):122, 77

               
               
               Conread position:207-379
               
               
               Cow position:chr7:48563474-48563299 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:140
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):121, 72

               
               
               Conread position:211-377
               
               
               Cow position:chr7:11897469-11897644 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:130
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):114, 73

               
               
               Conread position:212-337
               
               
               Cow position:chr7:11796897-11796772 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:127
               
               
               Alignm identity:101
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):117, 72

               
               
               Conread position:212-367
               
               
               Cow position:chr7:26909755-26909601 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:126
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):117, 53

               
               
               Conread position:212-377
               
               
               Cow position:chr7:10415129-10414963 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:120
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):118, 72

               
               
               Conread position:214-356
               
               
               Cow position:chr7:34464366-34464508 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:108
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):116, 37

               
               
               Conread position:215-356
               
               
               Cow position:chr7:41729295-41729154 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:111
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):112, 36

               
               
               Conread position:215-358
               
               
               Cow position:chr7:26791515-26791657 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:107
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):113, 79

               
               
               Conread position:217-336
               
               
               Cow position:chr7:37651502-37651625 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:124
               
               
               Alignm identity:97
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):66, 0

               
               
               Conread position:217-356
               
               
               Cow position:chr7:8090406-8090268 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:108
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):112, 47

               
               
               Conread position:217-356
               
               
               Cow position:chr7:53652994-53653133 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:108
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):113, 8

               
               
               Conread position:218-344
               
               
               Cow position:chr7:9816009-9816134 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:128
               
               
               Alignm identity:103
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):110, 67

               
               
               Conread position:218-368
               
               
               Cow position:chr7:8289893-8289735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:123
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):109, 33

               
               
               Conread position:218-379
               
               
               Cow position:chr7:18464473-18464311 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):136, 66

               
               
               Conread position:219-334
               
               
               Cow position:chr7:60121038-60121153 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:117
               
               
               Alignm identity:92
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):108, 65

               
               
               Conread position:219-351
               
               
               Cow position:chr7:63085761-63085894 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:103
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):109, 66

               
               
               Conread position:219-356
               
               
               Cow position:chr7:9200409-9200272 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:108
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):111, 65

               
               
               Conread position:219-356
               
               
               Cow position:chr7:11015694-11015832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:115
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):111, 65

               
               
               Conread position:219-356
               
               
               Cow position:chr7:12495108-12494970 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:106
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):110, 59

               
               
               Conread position:219-356
               
               
               Cow position:chr7:59258632-59258495 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:107
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):124, 65

               
               
               Conread position:219-362
               
               
               Cow position:chr7:10885975-10886119 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:118
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):100, 65

               
               
               Conread position:220-354
               
               
               Cow position:chr7:9077797-9077661 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:106
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):109, 68

               
               
               Conread position:221-329
               
               
               Cow position:chr7:13670128-13670234 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:109
               
               
               Alignm identity:88
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):34, 0

               
               
               Conread position:221-357
               
               
               Cow position:chr7:57066795-57066658 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:114
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):6, 64

               
               
               Conread position:222-336
               
               
               Cow position:chr7:29709714-29709601 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:115
               
               
               Alignm identity:92
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):62, 0

               
               
               Conread position:223-368
               
               
               Cow position:chr7:16563705-16563561 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:108
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):120, 61

               
               
               Conread position:223-368
               
               
               Cow position:chr7:57243216-57243072 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:108
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):106, 61

               
               
               Conread position:224-419
               
               
               Cow position:chr7:51401309-51401498 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:152
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):166, 55

               
               
               Conread position:228-343
               
               
               Cow position:chr7:14499315-14499200 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:117
               
               
               Alignm identity:93
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):102, 66

               
               
               Conread position:230-334
               
               
               Cow position:chr7:41770360-41770256 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:106
               
               
               Alignm identity:87
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):100, 51

               
               
               Conread position:231-356
               
               
               Cow position:chr7:58800193-58800318 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:128
               
               
               Alignm identity:102
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):97, 57

               
               
               Conread position:233-367
               
               
               Cow position:chr7:62498023-62497885 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:108
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):74, 51

               
               
               Conread position:238-368
               
               
               Cow position:chr7:31523576-31523709 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:106
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):91, 46

               
               
               Conread position:240-414
               
               
               Cow position:chr7:58296786-58296614 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:133
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):89, 39

               
               
               Conread position:243-368
               
               
               Cow position:chr7:33810746-33810873 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:130
               
               
               Alignm identity:102
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):31, 44

               
               
               Conread position:244-379
               
               
               Cow position:chr7:30277370-30277503 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:106
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):85, 40

               
               
               Conread position:245-356
               
               
               Cow position:chr7:13096017-13096129 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:114
               
               
               Alignm identity:93
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):84, 39

               
               
               Conread position:251-368
               
               
               Cow position:chr7:14534967-14535085 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:120
               
               
               Alignm identity:98
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):79, 34
Show alignments to all cow chromosomes.
Conread position:	24-379
Cow position:	chr7:19399859-19399511 (view UCSC Genome Browser custom track)
Alignm length:	363
Alignm identity:	246
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	157, 31
Conread position:	25-184
Cow position:	chr7:59713284-59713444 (view UCSC Genome Browser custom track)
Alignm length:	164
Alignm identity:	122
Alignm E-value:	9e-23
Alignm gaps (pig, cow):	30, 22
Conread position:	25-280
Cow position:	chr7:33297249-33297507 (view UCSC Genome Browser custom track)
Alignm length:	264
Alignm identity:	174
Alignm E-value:	8e-22
Alignm gaps (pig, cow):	60, 28
Conread position:	26-356
Cow position:	chr7:9800172-9800505 (view UCSC Genome Browser custom track)
Alignm length:	344
Alignm identity:	252
Alignm E-value:	0
Alignm gaps (pig, cow):	29, 72
Conread position:	27-277
Cow position:	chr7:19051503-19051250 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	173
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	31, 40
Conread position:	27-367
Cow position:	chr7:59245783-59246112 (view UCSC Genome Browser custom track)
Alignm length:	344
Alignm identity:	231
Alignm E-value:	3e-32
Alignm gaps (pig, cow):	58, 28
Conread position:	27-413
Cow position:	chr7:45955746-45956131 (view UCSC Genome Browser custom track)
Alignm length:	398
Alignm identity:	266
Alignm E-value:	4e-36
Alignm gaps (pig, cow):	58, 28
Conread position:	29-277
Cow position:	chr7:40758424-40758162 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	179
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	56, 16
Conread position:	30-355
Cow position:	chr7:50066289-50065966 (view UCSC Genome Browser custom track)
Alignm length:	330
Alignm identity:	245
Alignm E-value:	0
Alignm gaps (pig, cow):	185, 23
Conread position:	31-379
Cow position:	chr7:53786140-53785805 (view UCSC Genome Browser custom track)
Alignm length:	355
Alignm identity:	255
Alignm E-value:	0
Alignm gaps (pig, cow):	13, 151
Conread position:	32-296
Cow position:	chr7:40335863-40336128 (view UCSC Genome Browser custom track)
Alignm length:	271
Alignm identity:	196
Alignm E-value:	2e-40
Alignm gaps (pig, cow):	107, 53
Conread position:	33-379
Cow position:	chr7:4764664-4765023 (view UCSC Genome Browser custom track)
Alignm length:	363
Alignm identity:	276
Alignm E-value:	0
Alignm gaps (pig, cow):	10, 69
Conread position:	34-336
Cow position:	chr7:58841479-58841778 (view UCSC Genome Browser custom track)
Alignm length:	312
Alignm identity:	211
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	21, 13
Conread position:	35-198
Cow position:	chr7:5399219-5399050 (view UCSC Genome Browser custom track)
Alignm length:	171
Alignm identity:	129
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	49, 18
Conread position:	35-240
Cow position:	chr7:23619257-23619048 (view UCSC Genome Browser custom track)
Alignm length:	214
Alignm identity:	164
Alignm E-value:	5e-37
Alignm gaps (pig, cow):	148, 20
Conread position:	35-244
Cow position:	chr7:53992526-53992738 (view UCSC Genome Browser custom track)
Alignm length:	217
Alignm identity:	153
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	101, 49
Conread position:	35-258
Cow position:	chr7:39529172-39528940 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	174
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	49, 20
Conread position:	35-261
Cow position:	chr7:5914031-5914252 (view UCSC Genome Browser custom track)
Alignm length:	230
Alignm identity:	174
Alignm E-value:	2e-39
Alignm gaps (pig, cow):	50, 20
Conread position:	35-262
Cow position:	chr7:13928326-13928097 (view UCSC Genome Browser custom track)
Alignm length:	234
Alignm identity:	182
Alignm E-value:	4.2039e-45
Alignm gaps (pig, cow):	140, 20
Conread position:	35-265
Cow position:	chr7:54090031-54090267 (view UCSC Genome Browser custom track)
Alignm length:	242
Alignm identity:	175
Alignm E-value:	7e-30
Alignm gaps (pig, cow):	50, 10