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Cow genome map

           
Conread name:
           
Ss1.1-rmgp012_h16.5
        

               
Conread position:
               
10-368
               

               
Cow position:
               
chr9:61544917-61544562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
75, 45
               

               
Conread position:
               
20-328
               

               
Cow position:
               
chr9:766890-767200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
22-336
               

               
Cow position:
               
chr9:56253157-56252843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
6, 58
               

               
Conread position:
               
24-355
               

               
Cow position:
               
chr9:34957796-34958134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
25-327
               

               
Cow position:
               
chr9:54924878-54924572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
25-336
               

               
Cow position:
               
chr9:34310286-34309971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
28-355
               

               
Cow position:
               
chr9:4340915-4341237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
31-184
               

               
Cow position:
               
chr9:3807493-3807643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
32-263
               

               
Cow position:
               
chr9:19542155-19541920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
34-336
               

               
Cow position:
               
chr9:30138369-30138063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
34-359
               

               
Cow position:
               
chr9:25546877-25546560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
152, 13
               

               
Conread position:
               
34-379
               

               
Cow position:
               
chr9:48106877-48107224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
35-208
               

               
Cow position:
               
chr9:38875331-38875509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 10
               

               
Conread position:
               
35-244
               

               
Cow position:
               
chr9:36067149-36066939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
35-316
               

               
Cow position:
               
chr9:47472939-47472649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
35-327
               

               
Cow position:
               
chr9:32306993-32307279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
153, 20
               

               
Conread position:
               
35-336
               

               
Cow position:
               
chr9:1751577-1751280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
35-336
               

               
Cow position:
               
chr9:33940850-33940547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
35-355
               

               
Cow position:
               
chr9:19637395-19637711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
35-355
               

               
Cow position:
               
chr9:24887443-24887128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 10
               

               
Conread position:
               
35-356
               

               
Cow position:
               
chr9:44822059-44822403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
35-356
               

               
Cow position:
               
chr9:64050312-64050640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
35-361
               

               
Cow position:
               
chr9:58133779-58134098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
35-367
               

               
Cow position:
               
chr9:62400197-62399874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
35-368
               

               
Cow position:
               
chr9:3959297-3958980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
124, 23
               

               
Conread position:
               
35-368
               

               
Cow position:
               
chr9:8724039-8723703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
35-368
               

               
Cow position:
               
chr9:9416164-9416486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 20
               

               
Conread position:
               
35-368
               

               
Cow position:
               
chr9:31347197-31346859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
35-370
               

               
Cow position:
               
chr9:32676929-32676580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
35-379
               

               
Cow position:
               
chr9:10666781-10667118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
37-291
               

               
Cow position:
               
chr9:50702869-50703123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 150
               

               
Conread position:
               
42-288
               

               
Cow position:
               
chr9:32711168-32710920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
43-356
               

               
Cow position:
               
chr9:55287659-55287968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
45-213
               

               
Cow position:
               
chr9:47385549-47385721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
45-316
               

               
Cow position:
               
chr9:5531837-5531562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 162
               

               
Conread position:
               
45-316
               

               
Cow position:
               
chr9:10566446-10566170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 201
               

               
Conread position:
               
45-316
               

               
Cow position:
               
chr9:34058298-34058022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 163
               

               
Conread position:
               
45-316
               

               
Cow position:
               
chr9:63032767-63033042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 163
               

               
Conread position:
               
45-323
               

               
Cow position:
               
chr9:21030550-21030264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
40, 178
               

               
Conread position:
               
45-337
               

               
Cow position:
               
chr9:34016324-34016623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
40, 246
               

               
Conread position:
               
47-316
               

               
Cow position:
               
chr9:47442854-47443123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 6
               

               
Conread position:
               
47-325
               

               
Cow position:
               
chr9:31226230-31226517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 248
               

               
Conread position:
               
47-356
               

               
Cow position:
               
chr9:45141373-45141679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
47-370
               

               
Cow position:
               
chr9:5509956-5509632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 63
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr9:57896893-57897216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
282, 38
               

               
Conread position:
               
48-184
               

               
Cow position:
               
chr9:10877635-10877774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 56
               

               
Conread position:
               
48-233
               

               
Cow position:
               
chr9:16218412-16218604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
48-262
               

               
Cow position:
               
chr9:25657745-25657525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 179
               

               
Conread position:
               
48-262
               

               
Cow position:
               
chr9:36999830-37000045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
89, 37
               

               
Conread position:
               
48-274
               

               
Cow position:
               
chr9:14853224-14853446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
48-283
               

               
Cow position:
               
chr9:36410121-36410363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
37, 175
               

               
Conread position:
               
48-316
               

               
Cow position:
               
chr9:35850130-35849867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
48-325
               

               
Cow position:
               
chr9:13994419-13994120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 46
               

               
Conread position:
               
48-327
               

               
Cow position:
               
chr9:6089328-6089041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
48-327
               

               
Cow position:
               
chr9:13169437-13169711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 35
               

               
Conread position:
               
48-332
               

               
Cow position:
               
chr9:9573566-9573269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 42
               

               
Conread position:
               
48-334
               

               
Cow position:
               
chr9:8534452-8534746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
48-334
               

               
Cow position:
               
chr9:34697064-34697355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 42
               

               
Conread position:
               
48-336
               

               
Cow position:
               
chr9:21888400-21888112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
48-336
               

               
Cow position:
               
chr9:58204897-58204615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
48-349
               

               
Cow position:
               
chr9:6192228-6192532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
48-349
               

               
Cow position:
               
chr9:25922055-25921750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
48-349
               

               
Cow position:
               
chr9:44831824-44832125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 63
               

               
Conread position:
               
48-350
               

               
Cow position:
               
chr9:33823329-33823045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
179, 37
               

               
Conread position:
               
48-351
               

               
Cow position:
               
chr9:50139512-50139211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
48-351
               

               
Cow position:
               
chr9:52724985-52725287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 159
               

               
Conread position:
               
48-356
               

               
Cow position:
               
chr9:6840242-6839914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 255
               

               
Conread position:
               
48-356
               

               
Cow position:
               
chr9:34374698-34375003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
48-358
               

               
Cow position:
               
chr9:23388447-23388753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 35
               

               
Conread position:
               
48-368
               

               
Cow position:
               
chr9:16300339-16300659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
48-368
               

               
Cow position:
               
chr9:59386546-59386858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 37
               

               
Conread position:
               
48-370
               

               
Cow position:
               
chr9:52001239-52000927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr9:26404020-26403682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 180
               

               
Conread position:
               
48-380
               

               
Cow position:
               
chr9:5433866-5433531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
49-169
               

               
Cow position:
               
chr9:58131495-58131615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
49-184
               

               
Cow position:
               
chr9:22616852-22616722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 6
               

               
Conread position:
               
49-337
               

               
Cow position:
               
chr9:49710073-49709788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 6
               

               
Conread position:
               
51-336
               

               
Cow position:
               
chr9:39428568-39428857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
34, 105
               

               
Conread position:
               
51-364
               

               
Cow position:
               
chr9:1532104-1532421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 102
               

               
Conread position:
               
51-368
               

               
Cow position:
               
chr9:30477556-30477864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 34
               

               
Conread position:
               
51-419
               

               
Cow position:
               
chr9:1916515-1916137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
52-163
               

               
Cow position:
               
chr9:33584225-33584336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
52-215
               

               
Cow position:
               
chr9:53608164-53608334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
52-223
               

               
Cow position:
               
chr9:41995941-41995762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
52-228
               

               
Cow position:
               
chr9:18072890-18073065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
128, 32
               

               
Conread position:
               
52-229
               

               
Cow position:
               
chr9:31292915-31292738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
129, 26
               

               
Conread position:
               
52-239
               

               
Cow position:
               
chr9:37528683-37528490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
52-248
               

               
Cow position:
               
chr9:27052106-27052311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
52-252
               

               
Cow position:
               
chr9:32812575-32812375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
52-266
               

               
Cow position:
               
chr9:17785234-17785444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
52-287
               

               
Cow position:
               
chr9:4128557-4128790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
128, 32
               

               
Conread position:
               
52-300
               

               
Cow position:
               
chr9:22361242-22360989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
33, 238
               

               
Conread position:
               
52-301
               

               
Cow position:
               
chr9:25958642-25958395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
120, 33
               

               
Conread position:
               
52-304
               

               
Cow position:
               
chr9:28735705-28735463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
52-308
               

               
Cow position:
               
chr9:36827352-36827106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
133, 25
               

               
Conread position:
               
52-323
               

               
Cow position:
               
chr9:20942383-20942660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 33
               

               
Conread position:
               
52-325
               

               
Cow position:
               
chr9:38184251-38184512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 137
               

               
Conread position:
               
52-325
               

               
Cow position:
               
chr9:52619879-52619603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
52-325
               

               
Cow position:
               
chr9:63905377-63905653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
32, 163
               

               
Conread position:
               
52-327
               

               
Cow position:
               
chr9:648003-647729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
52-327
               

               
Cow position:
               
chr9:10118438-10118707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
52-327
               

               
Cow position:
               
chr9:22638327-22638054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
52-327
               

               
Cow position:
               
chr9:25964597-25964881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 243
               

               
Conread position:
               
52-327
               

               
Cow position:
               
chr9:53257833-53258102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
87, 32
               

               
Conread position:
               
52-329
               

               
Cow position:
               
chr9:34762623-34762900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
52-336
               

               
Cow position:
               
chr9:29684374-29684086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
52-336
               

               
Cow position:
               
chr9:64559660-64559940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
52-341
               

               
Cow position:
               
chr9:52578306-52578600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 192
               

               
Conread position:
               
52-343
               

               
Cow position:
               
chr9:5226937-5227237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 194
               

               
Conread position:
               
52-351
               

               
Cow position:
               
chr9:17740717-17741015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 154
               

               
Conread position:
               
52-352
               

               
Cow position:
               
chr9:61022838-61022547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
52-355
               

               
Cow position:
               
chr9:4267753-4268060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 151
               

               
Conread position:
               
52-355
               

               
Cow position:
               
chr9:8636879-8636589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
165, 32
               

               
Conread position:
               
52-355
               

               
Cow position:
               
chr9:28747295-28747598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 63
               

               
Conread position:
               
52-355
               

               
Cow position:
               
chr9:45285304-45285613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 32
               

               
Conread position:
               
52-356
               

               
Cow position:
               
chr9:3782590-3782291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
52-364
               

               
Cow position:
               
chr9:36490668-36490988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
52-367
               

               
Cow position:
               
chr9:5393278-5392978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
33, 94
               

               
Conread position:
               
52-368
               

               
Cow position:
               
chr9:38846122-38846425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
52-368
               

               
Cow position:
               
chr9:56453559-56453247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 155
               

               
Conread position:
               
52-369
               

               
Cow position:
               
chr9:37069342-37069652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
52-370
               

               
Cow position:
               
chr9:5594727-5594411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
52-370
               

               
Cow position:
               
chr9:41513846-41513539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
90, 33
               

               
Conread position:
               
52-379
               

               
Cow position:
               
chr9:32732459-32732777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
52-380
               

               
Cow position:
               
chr9:10144245-10144579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 220
               

               
Conread position:
               
52-380
               

               
Cow position:
               
chr9:13670863-13670522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 145
               

               
Conread position:
               
52-416
               

               
Cow position:
               
chr9:5209811-5209434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
32, 158
               

               
Conread position:
               
52-419
               

               
Cow position:
               
chr9:3387918-3387545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 27
               

               
Conread position:
               
52-419
               

               
Cow position:
               
chr9:28948079-28947715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 33
               

               
Conread position:
               
53-248
               

               
Cow position:
               
chr9:49403978-49403789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
53-355
               

               
Cow position:
               
chr9:48628256-48627950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 11
               

               
Conread position:
               
53-356
               

               
Cow position:
               
chr9:1938352-1938045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
53-379
               

               
Cow position:
               
chr9:62724772-62724425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 239
               

               
Conread position:
               
54-356
               

               
Cow position:
               
chr9:11201812-11201516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
55-317
               

               
Cow position:
               
chr9:50295799-50296071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 55
               

               
Conread position:
               
55-350
               

               
Cow position:
               
chr9:11319408-11319707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 30
               

               
Conread position:
               
55-356
               

               
Cow position:
               
chr9:54528739-54528435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 74
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr9:30440381-30440611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
56-336
               

               
Cow position:
               
chr9:11364114-11363839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
56-347
               

               
Cow position:
               
chr9:49764879-49764593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
57-334
               

               
Cow position:
               
chr9:7363249-7362972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
57-356
               

               
Cow position:
               
chr9:28354740-28354438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 32
               

               
Conread position:
               
57-370
               

               
Cow position:
               
chr9:1950142-1949820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 63
               

               
Conread position:
               
58-158
               

               
Cow position:
               
chr9:34400260-34400158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
58-162
               

               
Cow position:
               
chr9:20465492-20465597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
58-181
               

               
Cow position:
               
chr9:26310779-26310655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
58-215
               

               
Cow position:
               
chr9:30664557-30664723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 93
               

               
Conread position:
               
58-221
               

               
Cow position:
               
chr9:36623231-36623390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
58-222
               

               
Cow position:
               
chr9:8546539-8546375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
58-228
               

               
Cow position:
               
chr9:41653010-41652836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 154
               

               
Conread position:
               
58-248
               

               
Cow position:
               
chr9:16182269-16182457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
58-249
               

               
Cow position:
               
chr9:35305899-35306089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
58-249
               

               
Cow position:
               
chr9:58439560-58439753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
58-256
               

               
Cow position:
               
chr9:41469637-41469844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
20, 171
               

               
Conread position:
               
58-258
               

               
Cow position:
               
chr9:18002728-18002934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
81, 24
               

               
Conread position:
               
58-260
               

               
Cow position:
               
chr9:5621809-5622020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
58-261
               

               
Cow position:
               
chr9:50667645-50667438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
58-262
               

               
Cow position:
               
chr9:27077030-27077226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
58-262
               

               
Cow position:
               
chr9:34000395-34000604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 165
               

               
Conread position:
               
58-262
               

               
Cow position:
               
chr9:57951108-57951305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
58-263
               

               
Cow position:
               
chr9:58734596-58734383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
13, 166
               

               
Conread position:
               
58-265
               

               
Cow position:
               
chr9:23028015-23027817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
58-265
               

               
Cow position:
               
chr9:53602634-53602440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
58-265
               

               
Cow position:
               
chr9:64516874-64517088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
27, 115
               

               
Conread position:
               
58-267
               

               
Cow position:
               
chr9:20738923-20738707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
58-268
               

               
Cow position:
               
chr9:28773338-28773131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
124, 27
               

               
Conread position:
               
58-269
               

               
Cow position:
               
chr9:1712263-1712467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
123, 26
               

               
Conread position:
               
58-271
               

               
Cow position:
               
chr9:29034818-29035029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
58-271
               

               
Cow position:
               
chr9:33388687-33388893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
58-273
               

               
Cow position:
               
chr9:29092025-29091797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
58-276
               

               
Cow position:
               
chr9:34919045-34919258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
58-276
               

               
Cow position:
               
chr9:54997802-54998027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
27, 166
               

               
Conread position:
               
58-277
               

               
Cow position:
               
chr9:20810840-20811064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
27, 153
               

               
Conread position:
               
58-282
               

               
Cow position:
               
chr9:5399940-5399732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
58-283
               

               
Cow position:
               
chr9:1997359-1997131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
58-283
               

               
Cow position:
               
chr9:8868915-8869148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
58-283
               

               
Cow position:
               
chr9:18162934-18163165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
58-284
               

               
Cow position:
               
chr9:29108759-29108530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
58-294
               

               
Cow position:
               
chr9:33038237-33038476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
27, 215
               

               
Conread position:
               
58-296
               

               
Cow position:
               
chr9:49983471-49983707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
58-302
               

               
Cow position:
               
chr9:4928852-4928602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 154
               

               
Conread position:
               
58-303
               

               
Cow position:
               
chr9:3410990-3410758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
152, 27
               

               
Conread position:
               
58-303
               

               
Cow position:
               
chr9:43023643-43023394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 232
               

               
Conread position:
               
58-306
               

               
Cow position:
               
chr9:35533730-35533980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
58-307
               

               
Cow position:
               
chr9:6225231-6225482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
58-309
               

               
Cow position:
               
chr9:38344115-38343860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 230
               

               
Conread position:
               
58-311
               

               
Cow position:
               
chr9:3371800-3371535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
30, 177
               

               
Conread position:
               
58-314
               

               
Cow position:
               
chr9:40327328-40327584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 182
               

               
Conread position:
               
58-316
               

               
Cow position:
               
chr9:20406859-20406615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
27, 153
               

               
Conread position:
               
58-319
               

               
Cow position:
               
chr9:8317241-8317488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
26, 106
               

               
Conread position:
               
58-320
               

               
Cow position:
               
chr9:41789500-41789243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
58-323
               

               
Cow position:
               
chr9:20318357-20318616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 25
               

               
Conread position:
               
58-323
               

               
Cow position:
               
chr9:35203105-35202835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 170
               

               
Conread position:
               
58-323
               

               
Cow position:
               
chr9:49982876-49983133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
58-324
               

               
Cow position:
               
chr9:6339023-6338748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 186
               

               
Conread position:
               
58-324
               

               
Cow position:
               
chr9:8937369-8937107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
58-324
               

               
Cow position:
               
chr9:15982857-15983117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 131
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr9:5268777-5268507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
27, 186
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr9:7866287-7866028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr9:12428285-12428546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
26, 178
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr9:52505082-52505352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr9:61493248-61492986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
26, 132
               

               
Conread position:
               
58-327
               

               
Cow position:
               
chr9:5161845-5162098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
58-327
               

               
Cow position:
               
chr9:22114412-22114683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
58-328
               

               
Cow position:
               
chr9:28726502-28726773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
58-329
               

               
Cow position:
               
chr9:33598202-33597936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
58-329
               

               
Cow position:
               
chr9:56032107-56032365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
58-331
               

               
Cow position:
               
chr9:16086481-16086189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 156
               

               
Conread position:
               
58-331
               

               
Cow position:
               
chr9:31640097-31640378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
28, 170
               

               
Conread position:
               
58-331
               

               
Cow position:
               
chr9:35904530-35904798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
58-331
               

               
Cow position:
               
chr9:63194829-63194554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
79, 164
               

               
Conread position:
               
58-334
               

               
Cow position:
               
chr9:18215688-18215965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
58-334
               

               
Cow position:
               
chr9:35027952-35028221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
84, 16
               

               
Conread position:
               
58-335
               

               
Cow position:
               
chr9:4861613-4861327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
27, 235
               

               
Conread position:
               
58-335
               

               
Cow position:
               
chr9:12183973-12183690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 37
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr9:3186363-3186068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
27, 165
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr9:7410003-7409705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr9:8338251-8337969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 95
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr9:17928993-17928699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
26, 242
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr9:23430921-23431205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 234
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr9:24997293-24997575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr9:31078861-31079138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr9:41416572-41416275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr9:44467128-44467397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 155
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr9:44914874-44915155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
58-337
               

               
Cow position:
               
chr9:36445844-36445561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
58-337
               

               
Cow position:
               
chr9:59013114-59013398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
58-337
               

               
Cow position:
               
chr9:62357310-62357587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
104, 28
               

               
Conread position:
               
58-344
               

               
Cow position:
               
chr9:46981011-46981293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
27, 149
               

               
Conread position:
               
58-346
               

               
Cow position:
               
chr9:26086288-26085992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 240
               

               
Conread position:
               
58-348
               

               
Cow position:
               
chr9:1520509-1520811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 167
               

               
Conread position:
               
58-348
               

               
Cow position:
               
chr9:5327475-5327186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 27
               

               
Conread position:
               
58-349
               

               
Cow position:
               
chr9:3070202-3070481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
58-349
               

               
Cow position:
               
chr9:42062337-42062028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 244
               

               
Conread position:
               
58-350
               

               
Cow position:
               
chr9:51566265-51566567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
58-351
               

               
Cow position:
               
chr9:6933851-6934147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
58-351
               

               
Cow position:
               
chr9:22696438-22696149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
58-351
               

               
Cow position:
               
chr9:29825257-29824956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
58-351
               

               
Cow position:
               
chr9:50080825-50081114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
58-354
               

               
Cow position:
               
chr9:20848157-20847858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 155
               

               
Conread position:
               
58-354
               

               
Cow position:
               
chr9:44552968-44552675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
58-355
               

               
Cow position:
               
chr9:51620657-51620367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 26
               

               
Conread position:
               
58-355
               

               
Cow position:
               
chr9:58972270-58972572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 229
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr9:1973163-1972869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
28, 44
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr9:5836383-5836066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 48
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr9:8563062-8562743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 251
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr9:9443376-9443680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr9:9461434-9461733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr9:17871886-17872189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr9:22151866-22152164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr9:37017105-37016819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr9:50977025-50977332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr9:56773304-56772997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
27, 114
               

               
Conread position:
               
58-358
               

               
Cow position:
               
chr9:4646107-4646403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
58-358
               

               
Cow position:
               
chr9:33681905-33681578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
58-358
               

               
Cow position:
               
chr9:64155635-64155932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 127
               

               
Conread position:
               
58-361
               

               
Cow position:
               
chr9:46316567-46316865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 27
               

               
Conread position:
               
58-363
               

               
Cow position:
               
chr9:27279539-27279225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 162
               

               
Conread position:
               
58-364
               

               
Cow position:
               
chr9:5319850-5319535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
58-364
               

               
Cow position:
               
chr9:51204946-51204639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 129
               

               
Conread position:
               
58-364
               

               
Cow position:
               
chr9:56011718-56011412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 155
               

               
Conread position:
               
58-365
               

               
Cow position:
               
chr9:15225069-15225383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
58-365
               

               
Cow position:
               
chr9:54611010-54611322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 115
               

               
Conread position:
               
58-367
               

               
Cow position:
               
chr9:52407391-52407069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
58-368
               

               
Cow position:
               
chr9:8288838-8288527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
58-368
               

               
Cow position:
               
chr9:26278952-26279262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
58-368
               

               
Cow position:
               
chr9:42498050-42497734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
58-368
               

               
Cow position:
               
chr9:55890030-55889724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
58-368
               

               
Cow position:
               
chr9:61997374-61997694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 171
               

               
Conread position:
               
58-370
               

               
Cow position:
               
chr9:21459936-21460244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
58-370
               

               
Cow position:
               
chr9:55084076-55084394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
58-377
               

               
Cow position:
               
chr9:5756782-5757087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
112, 27
               

               
Conread position:
               
58-377
               

               
Cow position:
               
chr9:9199563-9199879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 26
               

               
Conread position:
               
58-377
               

               
Cow position:
               
chr9:31626370-31626034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
28, 73
               

               
Conread position:
               
58-377
               

               
Cow position:
               
chr9:55256326-55256652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 169
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr9:6952311-6951999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr9:28983402-28983088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
124, 26
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr9:29006781-29006446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr9:42264442-42264108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
27, 173
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr9:64106128-64105790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
58-395
               

               
Cow position:
               
chr9:1729455-1729796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
58-395
               

               
Cow position:
               
chr9:29184912-29185259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
58-405
               

               
Cow position:
               
chr9:53762922-53762564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 119
               

               
Conread position:
               
58-414
               

               
Cow position:
               
chr9:16745899-16745534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
101, 26
               

               
Conread position:
               
58-415
               

               
Cow position:
               
chr9:35375645-35375296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
58-416
               

               
Cow position:
               
chr9:64091909-64091531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 239
               

               
Conread position:
               
58-419
               

               
Cow position:
               
chr9:29841108-29840759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 32
               

               
Conread position:
               
58-420
               

               
Cow position:
               
chr9:47869228-47868852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
59-214
               

               
Cow position:
               
chr9:22227866-22228021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 26
               

               
Conread position:
               
59-252
               

               
Cow position:
               
chr9:5238616-5238422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
59-265
               

               
Cow position:
               
chr9:1879596-1879393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
59-268
               

               
Cow position:
               
chr9:21840295-21840082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
112, 25
               

               
Conread position:
               
59-271
               

               
Cow position:
               
chr9:26390988-26390776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
59-276
               

               
Cow position:
               
chr9:40105697-40105469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 160
               

               
Conread position:
               
59-323
               

               
Cow position:
               
chr9:44833745-44834007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
59-325
               

               
Cow position:
               
chr9:26440576-26440858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 243
               

               
Conread position:
               
59-325
               

               
Cow position:
               
chr9:31077458-31077716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
59-326
               

               
Cow position:
               
chr9:11192947-11193223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 153
               

               
Conread position:
               
59-328
               

               
Cow position:
               
chr9:53211277-53211540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
59-334
               

               
Cow position:
               
chr9:20989234-20989514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
59-335
               

               
Cow position:
               
chr9:18216880-18217156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
59-350
               

               
Cow position:
               
chr9:32371541-32371824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
59-355
               

               
Cow position:
               
chr9:18342943-18342655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
59-364
               

               
Cow position:
               
chr9:6686089-6685812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
270, 20
               

               
Conread position:
               
59-364
               

               
Cow position:
               
chr9:20416289-20416594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
59-368
               

               
Cow position:
               
chr9:10308788-10309086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
59-379
               

               
Cow position:
               
chr9:10011020-10010699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
59-379
               

               
Cow position:
               
chr9:17799850-17799522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 55
               

               
Conread position:
               
59-379
               

               
Cow position:
               
chr9:58979621-58979293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 162
               

               
Conread position:
               
59-418
               

               
Cow position:
               
chr9:59795059-59795428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 178
               

               
Conread position:
               
60-277
               

               
Cow position:
               
chr9:56861237-56861007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 194
               

               
Conread position:
               
60-353
               

               
Cow position:
               
chr9:214246-214531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
26, 6
               

               
Conread position:
               
60-419
               

               
Cow position:
               
chr9:15006534-15006899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 7
               

               
Conread position:
               
61-404
               

               
Cow position:
               
chr9:38793236-38792887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 156
               

               
Conread position:
               
62-180
               

               
Cow position:
               
chr9:1350228-1350345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
62-209
               

               
Cow position:
               
chr9:42585407-42585564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
62-211
               

               
Cow position:
               
chr9:33100923-33101072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
62-211
               

               
Cow position:
               
chr9:51011323-51011481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
26, 110
               

               
Conread position:
               
62-258
               

               
Cow position:
               
chr9:1909169-1909361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
123, 15
               

               
Conread position:
               
62-265
               

               
Cow position:
               
chr9:6117930-6118136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
62-276
               

               
Cow position:
               
chr9:30749368-30749587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
74, 23
               

               
Conread position:
               
62-279
               

               
Cow position:
               
chr9:9516553-9516767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 22
               

               
Conread position:
               
62-280
               

               
Cow position:
               
chr9:2022911-2022692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
26, 45
               

               
Conread position:
               
62-283
               

               
Cow position:
               
chr9:35359885-35360109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 167
               

               
Conread position:
               
62-293
               

               
Cow position:
               
chr9:5532170-5531927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
62-306
               

               
Cow position:
               
chr9:34742511-34742751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
62-309
               

               
Cow position:
               
chr9:30162380-30162126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
20, 167
               

               
Conread position:
               
62-316
               

               
Cow position:
               
chr9:40302908-40303176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
22, 238
               

               
Conread position:
               
62-325
               

               
Cow position:
               
chr9:43207156-43207420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 152
               

               
Conread position:
               
62-334
               

               
Cow position:
               
chr9:9723663-9723932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
62-334
               

               
Cow position:
               
chr9:56087850-56088124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
62-336
               

               
Cow position:
               
chr9:14961166-14960890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
62-336
               

               
Cow position:
               
chr9:18381076-18380807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
62-336
               

               
Cow position:
               
chr9:30402203-30402483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
62-336
               

               
Cow position:
               
chr9:45756577-45756305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
62-337
               

               
Cow position:
               
chr9:11313290-11313569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
62-338
               

               
Cow position:
               
chr9:2113787-2114064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 181
               

               
Conread position:
               
62-349
               

               
Cow position:
               
chr9:15215464-15215758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
62-356
               

               
Cow position:
               
chr9:5218962-5219251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
62-356
               

               
Cow position:
               
chr9:5763413-5763709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 148
               

               
Conread position:
               
62-356
               

               
Cow position:
               
chr9:13205351-13205645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
62-356
               

               
Cow position:
               
chr9:31814161-31814465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
116, 23
               

               
Conread position:
               
62-356
               

               
Cow position:
               
chr9:52484700-52484994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
80, 23
               

               
Conread position:
               
62-364
               

               
Cow position:
               
chr9:9595737-9596039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
62-379
               

               
Cow position:
               
chr9:1614937-1614613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
23, 156
               

               
Conread position:
               
62-379
               

               
Cow position:
               
chr9:26057221-26057543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
62-379
               

               
Cow position:
               
chr9:54681719-54681407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 23
               

               
Conread position:
               
62-382
               

               
Cow position:
               
chr9:41283244-41282910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 171
               

               
Conread position:
               
62-395
               

               
Cow position:
               
chr9:15805704-15806045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 92
               

               
Conread position:
               
62-414
               

               
Cow position:
               
chr9:5442213-5441845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
23, 230
               

               
Conread position:
               
62-419
               

               
Cow position:
               
chr9:6879987-6879630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
62-419
               

               
Cow position:
               
chr9:23042993-23042628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
63-206
               

               
Cow position:
               
chr9:9491009-9490862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
63-233
               

               
Cow position:
               
chr9:61846934-61847108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
82, 21
               

               
Conread position:
               
63-266
               

               
Cow position:
               
chr9:40604166-40603957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 44
               

               
Conread position:
               
63-276
               

               
Cow position:
               
chr9:30195429-30195216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
63-334
               

               
Cow position:
               
chr9:16811443-16811710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
63-337
               

               
Cow position:
               
chr9:9552303-9552031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 21
               

               
Conread position:
               
63-338
               

               
Cow position:
               
chr9:33093170-33092901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
22, 42
               

               
Conread position:
               
63-348
               

               
Cow position:
               
chr9:33119666-33119960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 228
               

               
Conread position:
               
63-379
               

               
Cow position:
               
chr9:43444011-43443703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
64-303
               

               
Cow position:
               
chr9:1952054-1952294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
64-336
               

               
Cow position:
               
chr9:39577949-39577681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
72, 21
               

               
Conread position:
               
64-356
               

               
Cow position:
               
chr9:11123277-11123562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
122, 20
               

               
Conread position:
               
65-282
               

               
Cow position:
               
chr9:31587883-31588107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
65-282
               

               
Cow position:
               
chr9:38692324-38692539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
65-316
               

               
Cow position:
               
chr9:21279390-21279129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
20, 241
               

               
Conread position:
               
65-316
               

               
Cow position:
               
chr9:27780978-27780723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 143
               

               
Conread position:
               
65-316
               

               
Cow position:
               
chr9:29024727-29024472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
65-336
               

               
Cow position:
               
chr9:29808678-29808397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
65-336
               

               
Cow position:
               
chr9:41958581-41958844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
19, 145
               

               
Conread position:
               
65-344
               

               
Cow position:
               
chr9:9634884-9635157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
65-379
               

               
Cow position:
               
chr9:8599817-8599512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 150
               

               
Conread position:
               
65-419
               

               
Cow position:
               
chr9:42037870-42037501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
65-420
               

               
Cow position:
               
chr9:63598038-63597684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
66-238
               

               
Cow position:
               
chr9:42998254-42998431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
66-255
               

               
Cow position:
               
chr9:11198129-11198320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
66-289
               

               
Cow position:
               
chr9:10127455-10127684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 177
               

               
Conread position:
               
66-335
               

               
Cow position:
               
chr9:28391818-28392082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
19, 148
               

               
Conread position:
               
66-356
               

               
Cow position:
               
chr9:44108614-44108907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
66-363
               

               
Cow position:
               
chr9:3379332-3379046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
263, 19
               

               
Conread position:
               
66-379
               

               
Cow position:
               
chr9:34901899-34902206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
67-325
               

               
Cow position:
               
chr9:31124711-31124975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
19, 162
               

               
Conread position:
               
67-334
               

               
Cow position:
               
chr9:13221681-13221948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
67-356
               

               
Cow position:
               
chr9:9624814-9625089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
68-323
               

               
Cow position:
               
chr9:52637945-52638211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
17, 229
               

               
Conread position:
               
68-327
               

               
Cow position:
               
chr9:11068255-11068519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
68-336
               

               
Cow position:
               
chr9:43912140-43911872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
68-354
               

               
Cow position:
               
chr9:58614704-58614417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
69-252
               

               
Cow position:
               
chr9:26828611-26828798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
69-316
               

               
Cow position:
               
chr9:17579525-17579276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
15, 137
               

               
Conread position:
               
69-316
               

               
Cow position:
               
chr9:47375208-47375459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
69-324
               

               
Cow position:
               
chr9:4512701-4512443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
17, 139
               

               
Conread position:
               
69-331
               

               
Cow position:
               
chr9:53138918-53139185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
68, 153
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr9:39152468-39152751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
69-358
               

               
Cow position:
               
chr9:61303217-61302919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 223
               

               
Conread position:
               
70-280
               

               
Cow position:
               
chr9:55893268-55893054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
67, 167
               

               
Conread position:
               
70-312
               

               
Cow position:
               
chr9:22802729-22802483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 151
               

               
Conread position:
               
70-380
               

               
Cow position:
               
chr9:20091253-20090945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 138
               

               
Conread position:
               
71-184
               

               
Cow position:
               
chr9:23970714-23970828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
72-331
               

               
Cow position:
               
chr9:34911371-34911100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
74-354
               

               
Cow position:
               
chr9:19903270-19903005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
254, 33
               

               
Conread position:
               
74-356
               

               
Cow position:
               
chr9:50543216-50543506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 58
               

               
Conread position:
               
74-363
               

               
Cow position:
               
chr9:19493254-19493552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 218
               

               
Conread position:
               
75-324
               

               
Cow position:
               
chr9:59078836-59078575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 183
               

               
Conread position:
               
75-334
               

               
Cow position:
               
chr9:50076266-50076008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
10, 140
               

               
Conread position:
               
76-367
               

               
Cow position:
               
chr9:61739125-61738832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
10, 105
               

               
Conread position:
               
77-269
               

               
Cow position:
               
chr9:59172174-59172371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
77-275
               

               
Cow position:
               
chr9:12356062-12355856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
77-310
               

               
Cow position:
               
chr9:10966145-10965911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
8, 145
               

               
Conread position:
               
77-325
               

               
Cow position:
               
chr9:47500001-47500258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
8, 218
               

               
Conread position:
               
77-333
               

               
Cow position:
               
chr9:10980914-10981176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 181
               

               
Conread position:
               
77-334
               

               
Cow position:
               
chr9:6397575-6397840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
8, 157
               

               
Conread position:
               
77-334
               

               
Cow position:
               
chr9:39681559-39681283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
8, 163
               

               
Conread position:
               
77-336
               

               
Cow position:
               
chr9:49847396-49847149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 138
               

               
Conread position:
               
77-358
               

               
Cow position:
               
chr9:11870412-11870127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
77-368
               

               
Cow position:
               
chr9:55118285-55117995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
7, 191
               

               
Conread position:
               
77-379
               

               
Cow position:
               
chr9:15684586-15684881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
78-237
               

               
Cow position:
               
chr9:52969314-52969473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
78-323
               

               
Cow position:
               
chr9:8548020-8547766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 136
               

               
Conread position:
               
78-368
               

               
Cow position:
               
chr9:62668457-62668157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 215
               

               
Conread position:
               
78-379
               

               
Cow position:
               
chr9:20579401-20579701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 169
               

               
Conread position:
               
79-215
               

               
Cow position:
               
chr9:45170964-45171106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
6, 54
               

               
Conread position:
               
79-248
               

               
Cow position:
               
chr9:60037857-60037680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
79-355
               

               
Cow position:
               
chr9:8657235-8657503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
79-356
               

               
Cow position:
               
chr9:22443418-22443706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 153
               

               
Conread position:
               
80-323
               

               
Cow position:
               
chr9:58447921-58448167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
60, 132
               

               
Conread position:
               
81-332
               

               
Cow position:
               
chr9:54437462-54437211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
84, 58
               

               
Conread position:
               
82-256
               

               
Cow position:
               
chr9:49279674-49279486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
82-300
               

               
Cow position:
               
chr9:41853642-41853411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
57, 217
               

               
Conread position:
               
82-337
               

               
Cow position:
               
chr9:12910199-12910460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
35, 147
               

               
Conread position:
               
82-419
               

               
Cow position:
               
chr9:41679945-41679591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 132
               

               
Conread position:
               
83-307
               

               
Cow position:
               
chr9:48118498-48118717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 129
               

               
Conread position:
               
83-314
               

               
Cow position:
               
chr9:25805033-25804797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
54, 150
               

               
Conread position:
               
83-321
               

               
Cow position:
               
chr9:25972697-25972463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 132
               

               
Conread position:
               
83-323
               

               
Cow position:
               
chr9:8997751-8997516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 113
               

               
Conread position:
               
83-323
               

               
Cow position:
               
chr9:20681207-20681450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
83-325
               

               
Cow position:
               
chr9:17676922-17677156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 72
               

               
Conread position:
               
83-327
               

               
Cow position:
               
chr9:14796574-14796818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
64, 108
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr9:37678086-37677838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
55, 78
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr9:44710024-44709773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 127
               

               
Conread position:
               
83-335
               

               
Cow position:
               
chr9:19714272-19714023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
83-336
               

               
Cow position:
               
chr9:9815612-9815355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
83-336
               

               
Cow position:
               
chr9:12225788-12226035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr9:60027390-60027119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
83-356
               

               
Cow position:
               
chr9:9654114-9654386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 5
               

               
Conread position:
               
83-356
               

               
Cow position:
               
chr9:33218753-33219028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 171
               

               
Conread position:
               
83-356
               

               
Cow position:
               
chr9:33237591-33237316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
83-356
               

               
Cow position:
               
chr9:34286999-34286720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 56
               

               
Conread position:
               
83-356
               

               
Cow position:
               
chr9:40542318-40542057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
59, 136
               

               
Conread position:
               
83-358
               

               
Cow position:
               
chr9:7634471-7634190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 22
               

               
Conread position:
               
83-364
               

               
Cow position:
               
chr9:8920197-8919902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
83-370
               

               
Cow position:
               
chr9:60110437-60110155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
245, 56
               

               
Conread position:
               
83-371
               

               
Cow position:
               
chr9:3932162-3931871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
69, 130
               

               
Conread position:
               
83-379
               

               
Cow position:
               
chr9:11299492-11299786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
100, 136
               

               
Conread position:
               
83-419
               

               
Cow position:
               
chr9:43037678-43037330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
83-420
               

               
Cow position:
               
chr9:10650106-10650460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
84-336
               

               
Cow position:
               
chr9:824158-823904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
56, 215
               

               
Conread position:
               
84-356
               

               
Cow position:
               
chr9:20755577-20755835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
127, 56
               

               
Conread position:
               
85-283
               

               
Cow position:
               
chr9:40543125-40543330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
51, 66
               

               
Conread position:
               
85-325
               

               
Cow position:
               
chr9:27029507-27029751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
54, 145
               

               
Conread position:
               
87-305
               

               
Cow position:
               
chr9:5575515-5575294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 157
               

               
Conread position:
               
87-356
               

               
Cow position:
               
chr9:3738027-3738303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
88, 119
               

               
Conread position:
               
87-379
               

               
Cow position:
               
chr9:22318537-22318248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
88-279
               

               
Cow position:
               
chr9:8525028-8524841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
97, 21
               

               
Conread position:
               
88-327
               

               
Cow position:
               
chr9:34468391-34468626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
100, 52
               

               
Conread position:
               
88-337
               

               
Cow position:
               
chr9:21080754-21080504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
88-377
               

               
Cow position:
               
chr9:19067971-19067682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 85
               

               
Conread position:
               
89-255
               

               
Cow position:
               
chr9:34666611-34666443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 127
               

               
Conread position:
               
89-282
               

               
Cow position:
               
chr9:62151294-62151103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
96, 80
               

               
Conread position:
               
89-316
               

               
Cow position:
               
chr9:16121361-16121131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
89-351
               

               
Cow position:
               
chr9:9753196-9753464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
58, 128
               

               
Conread position:
               
89-356
               

               
Cow position:
               
chr9:32625197-32624934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 70
               

               
Conread position:
               
91-336
               

               
Cow position:
               
chr9:9200534-9200779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
69, 104
               

               
Conread position:
               
91-336
               

               
Cow position:
               
chr9:25584011-25583772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
237, 47
               

               
Conread position:
               
91-336
               

               
Cow position:
               
chr9:62656986-62656745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
91-351
               

               
Cow position:
               
chr9:43871170-43870901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 201
               

               
Conread position:
               
91-351
               

               
Cow position:
               
chr9:55074939-55075202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
45, 135
               

               
Conread position:
               
91-359
               

               
Cow position:
               
chr9:23541217-23541477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 60
               

               
Conread position:
               
92-272
               

               
Cow position:
               
chr9:29330452-29330646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
92-334
               

               
Cow position:
               
chr9:63746004-63745759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
16, 123
               

               
Conread position:
               
92-337
               

               
Cow position:
               
chr9:5501047-5500794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 202
               

               
Conread position:
               
92-349
               

               
Cow position:
               
chr9:20321916-20322164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
92-368
               

               
Cow position:
               
chr9:54716425-54716693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
158, 32
               

               
Conread position:
               
93-228
               

               
Cow position:
               
chr9:3924809-3924674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
93-263
               

               
Cow position:
               
chr9:59507276-59507104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
93-277
               

               
Cow position:
               
chr9:19382513-19382327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 46
               

               
Conread position:
               
93-277
               

               
Cow position:
               
chr9:24399497-24399684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
93, 55
               

               
Conread position:
               
93-282
               

               
Cow position:
               
chr9:20961097-20961284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
49, 29
               

               
Conread position:
               
93-313
               

               
Cow position:
               
chr9:32816945-32817176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 214
               

               
Conread position:
               
93-325
               

               
Cow position:
               
chr9:48773532-48773304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
93-327
               

               
Cow position:
               
chr9:57274421-57274172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
93-329
               

               
Cow position:
               
chr9:32115422-32115649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
93-336
               

               
Cow position:
               
chr9:8998545-8998291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 199
               

               
Conread position:
               
93-350
               

               
Cow position:
               
chr9:34689414-34689670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
117, 25
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr9:30124109-30123850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 169
               

               
Conread position:
               
93-368
               

               
Cow position:
               
chr9:1371121-1370836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
93-379
               

               
Cow position:
               
chr9:9402987-9403288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
87, 120
               

               
Conread position:
               
93-414
               

               
Cow position:
               
chr9:25469223-25468908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
93-419
               

               
Cow position:
               
chr9:9315492-9315158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 149
               

               
Conread position:
               
93-419
               

               
Cow position:
               
chr9:19555563-19555218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 196
               

               
Conread position:
               
94-329
               

               
Cow position:
               
chr9:38614772-38615012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
45, 199
               

               
Conread position:
               
95-261
               

               
Cow position:
               
chr9:14358349-14358180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
41, 117
               

               
Conread position:
               
95-262
               

               
Cow position:
               
chr9:51005075-51004910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
95-274
               

               
Cow position:
               
chr9:10092199-10092390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
46, 119
               

               
Conread position:
               
95-283
               

               
Cow position:
               
chr9:32692307-32692106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
95-315
               

               
Cow position:
               
chr9:34106909-34106681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
65, 116
               

               
Conread position:
               
95-327
               

               
Cow position:
               
chr9:15950972-15951207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
95-329
               

               
Cow position:
               
chr9:9823319-9823556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
90, 119
               

               
Conread position:
               
95-329
               

               
Cow position:
               
chr9:47906093-47906332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 192
               

               
Conread position:
               
95-336
               

               
Cow position:
               
chr9:3774350-3774107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
95-337
               

               
Cow position:
               
chr9:9405864-9406112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
89, 195
               

               
Conread position:
               
95-337
               

               
Cow position:
               
chr9:24873015-24872777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 18
               

               
Conread position:
               
95-341
               

               
Cow position:
               
chr9:35167359-35167113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 133
               

               
Conread position:
               
95-350
               

               
Cow position:
               
chr9:49417174-49416914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 131
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr9:38961247-38961507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
36, 106
               

               
Conread position:
               
95-361
               

               
Cow position:
               
chr9:17410993-17411277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
56, 142
               

               
Conread position:
               
95-364
               

               
Cow position:
               
chr9:20900935-20901222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
95-367
               

               
Cow position:
               
chr9:56065735-56065474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
93, 59
               

               
Conread position:
               
95-379
               

               
Cow position:
               
chr9:8951092-8950801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
95-390
               

               
Cow position:
               
chr9:42445795-42446095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
96-282
               

               
Cow position:
               
chr9:31270965-31270775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
89, 127
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr9:22433746-22433986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
96-356
               

               
Cow position:
               
chr9:31638455-31638735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
45, 129
               

               
Conread position:
               
97-336
               

               
Cow position:
               
chr9:55321822-55321579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 191
               

               
Conread position:
               
97-344
               

               
Cow position:
               
chr9:55651212-55650974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
190, 59
               

               
Conread position:
               
97-361
               

               
Cow position:
               
chr9:5246040-5245769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
134, 193
               

               
Conread position:
               
98-316
               

               
Cow position:
               
chr9:41518434-41518663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
98-336
               

               
Cow position:
               
chr9:4858726-4858477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 152
               

               
Conread position:
               
98-351
               

               
Cow position:
               
chr9:63896714-63896467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 18
               

               
Conread position:
               
99-379
               

               
Cow position:
               
chr9:50606766-50607043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
84, 137
               

               
Conread position:
               
99-419
               

               
Cow position:
               
chr9:37099049-37099376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
100-336
               

               
Cow position:
               
chr9:8901042-8901285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
100-347
               

               
Cow position:
               
chr9:43875540-43875785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
119, 55
               

               
Conread position:
               
101-313
               

               
Cow position:
               
chr9:44921210-44921426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
81, 187
               

               
Conread position:
               
101-325
               

               
Cow position:
               
chr9:49374370-49374142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 164
               

               
Conread position:
               
101-378
               

               
Cow position:
               
chr9:51720721-51720999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 120
               

               
Conread position:
               
101-419
               

               
Cow position:
               
chr9:11168911-11168574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 120
               

               
Conread position:
               
102-327
               

               
Cow position:
               
chr9:27292103-27292326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
120, 61
               

               
Conread position:
               
102-351
               

               
Cow position:
               
chr9:47445847-47446089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
102-356
               

               
Cow position:
               
chr9:12281149-12280892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
34, 125
               

               
Conread position:
               
103-336
               

               
Cow position:
               
chr9:40215422-40215189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
39, 116
               

               
Conread position:
               
105-327
               

               
Cow position:
               
chr9:47590802-47591029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
13, 106
               

               
Conread position:
               
106-335
               

               
Cow position:
               
chr9:54493299-54493078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
109-335
               

               
Cow position:
               
chr9:62442463-62442233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
109-336
               

               
Cow position:
               
chr9:4580244-4580462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
221, 42
               

               
Conread position:
               
109-336
               

               
Cow position:
               
chr9:41957977-41957749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 176
               

               
Conread position:
               
109-377
               

               
Cow position:
               
chr9:25557138-25556872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 67
               

               
Conread position:
               
110-265
               

               
Cow position:
               
chr9:4323986-4324144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
75, 113
               

               
Conread position:
               
110-365
               

               
Cow position:
               
chr9:60394879-60395135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
75, 101
               

               
Conread position:
               
111-349
               

               
Cow position:
               
chr9:43937110-43936874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
74, 109
               

               
Conread position:
               
111-354
               

               
Cow position:
               
chr9:39011306-39011546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 71
               

               
Conread position:
               
111-355
               

               
Cow position:
               
chr9:26477387-26477139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
111-379
               

               
Cow position:
               
chr9:6851897-6852165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
26, 175
               

               
Conread position:
               
113-320
               

               
Cow position:
               
chr9:5077552-5077753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
114-319
               

               
Cow position:
               
chr9:50202737-50202533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 109
               

               
Conread position:
               
114-336
               

               
Cow position:
               
chr9:31557561-31557785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 170
               

               
Conread position:
               
114-356
               

               
Cow position:
               
chr9:5263668-5263421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
114-364
               

               
Cow position:
               
chr9:17310387-17310649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 184
               

               
Conread position:
               
114-368
               

               
Cow position:
               
chr9:23265160-23264903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
115-323
               

               
Cow position:
               
chr9:1755975-1756189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 96
               

               
Conread position:
               
116-334
               

               
Cow position:
               
chr9:5456008-5456231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
117-272
               

               
Cow position:
               
chr9:18029229-18029397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
117-354
               

               
Cow position:
               
chr9:49292981-49293220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 93
               

               
Conread position:
               
117-361
               

               
Cow position:
               
chr9:23261598-23261349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
67, 173
               

               
Conread position:
               
117-369
               

               
Cow position:
               
chr9:64637707-64637460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
118-419
               

               
Cow position:
               
chr9:8617965-8617678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
119-351
               

               
Cow position:
               
chr9:17518326-17518563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
120-297
               

               
Cow position:
               
chr9:34986313-34986499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
120-350
               

               
Cow position:
               
chr9:3220300-3220063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 112
               

               
Conread position:
               
120-371
               

               
Cow position:
               
chr9:3378906-3378660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
209, 35
               

               
Conread position:
               
121-325
               

               
Cow position:
               
chr9:10905653-10905863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
121-351
               

               
Cow position:
               
chr9:63784766-63784988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
121-358
               

               
Cow position:
               
chr9:11303917-11304154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 106
               

               
Conread position:
               
122-272
               

               
Cow position:
               
chr9:9086357-9086197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
122-323
               

               
Cow position:
               
chr9:62940882-62941077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
122-351
               

               
Cow position:
               
chr9:58670887-58670669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
208, 30
               

               
Conread position:
               
122-356
               

               
Cow position:
               
chr9:41394495-41394726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
206, 83
               

               
Conread position:
               
122-358
               

               
Cow position:
               
chr9:26344809-26345048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
123-379
               

               
Cow position:
               
chr9:33697185-33696934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
124-356
               

               
Cow position:
               
chr9:52267599-52267834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
62, 93
               

               
Conread position:
               
125-337
               

               
Cow position:
               
chr9:43757694-43757478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
63, 81
               

               
Conread position:
               
126-337
               

               
Cow position:
               
chr9:33114501-33114287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
130-336
               

               
Cow position:
               
chr9:34204282-34204072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
132-356
               

               
Cow position:
               
chr9:7953049-7952822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 85
               

               
Conread position:
               
133-363
               

               
Cow position:
               
chr9:32669799-32670031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
52, 99
               

               
Conread position:
               
134-348
               

               
Cow position:
               
chr9:51557351-51557557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
196, 79
               

               
Conread position:
               
134-351
               

               
Cow position:
               
chr9:52839739-52839954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
52, 85
               

               
Conread position:
               
135-356
               

               
Cow position:
               
chr9:28686538-28686309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
135-356
               

               
Cow position:
               
chr9:63153673-63153893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
135-370
               

               
Cow position:
               
chr9:34284094-34283859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
135-379
               

               
Cow position:
               
chr9:8628776-8629025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
135-396
               

               
Cow position:
               
chr9:4262946-4263209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 130
               

               
Conread position:
               
140-353
               

               
Cow position:
               
chr9:32348680-32348890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
140-356
               

               
Cow position:
               
chr9:35105649-35105869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
140-370
               

               
Cow position:
               
chr9:10819691-10819921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
140-382
               

               
Cow position:
               
chr9:60081047-60080801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
141-323
               

               
Cow position:
               
chr9:11969328-11969142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
141-361
               

               
Cow position:
               
chr9:41799240-41799455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
82, 35
               

               
Conread position:
               
141-416
               

               
Cow position:
               
chr9:41486100-41486382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
45, 70
               

               
Conread position:
               
142-372
               

               
Cow position:
               
chr9:1867589-1867355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
42, 81
               

               
Conread position:
               
143-356
               

               
Cow position:
               
chr9:36628242-36628040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
186, 41
               

               
Conread position:
               
143-368
               

               
Cow position:
               
chr9:6596096-6596321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
43, 70
               

               
Conread position:
               
143-379
               

               
Cow position:
               
chr9:26102852-26102619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
174, 13
               

               
Conread position:
               
144-332
               

               
Cow position:
               
chr9:31359738-31359550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
145-284
               

               
Cow position:
               
chr9:11377806-11377950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 85
               

               
Conread position:
               
145-304
               

               
Cow position:
               
chr9:35592143-35591986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 24
               

               
Conread position:
               
145-315
               

               
Cow position:
               
chr9:43013860-43013686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
41, 145
               

               
Conread position:
               
145-334
               

               
Cow position:
               
chr9:23788569-23788383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
145-336
               

               
Cow position:
               
chr9:40005612-40005416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
145-356
               

               
Cow position:
               
chr9:6189235-6189444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
145-370
               

               
Cow position:
               
chr9:26310639-26310414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 139
               

               
Conread position:
               
145-377
               

               
Cow position:
               
chr9:38624493-38624726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
146-335
               

               
Cow position:
               
chr9:5399273-5399078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
146-362
               

               
Cow position:
               
chr9:13743797-13744013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
146-374
               

               
Cow position:
               
chr9:53326615-53326851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
147-336
               

               
Cow position:
               
chr9:52513318-52513506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
64, 81
               

               
Conread position:
               
148-274
               

               
Cow position:
               
chr9:9090229-9090361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
148-356
               

               
Cow position:
               
chr9:64064227-64064442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
41, 142
               

               
Conread position:
               
152-336
               

               
Cow position:
               
chr9:1877878-1878060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
152-392
               

               
Cow position:
               
chr9:4630234-4629987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
154-325
               

               
Cow position:
               
chr9:35889111-35889276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
154-370
               

               
Cow position:
               
chr9:29339197-29339405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 126
               

               
Conread position:
               
155-337
               

               
Cow position:
               
chr9:49689083-49688904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 56
               

               
Conread position:
               
157-351
               

               
Cow position:
               
chr9:9686296-9686486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
173, 32
               

               
Conread position:
               
157-367
               

               
Cow position:
               
chr9:3353475-3353260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
158-325
               

               
Cow position:
               
chr9:50125476-50125640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
159-370
               

               
Cow position:
               
chr9:44770081-44770284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
161-336
               

               
Cow position:
               
chr9:3343863-3343691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
169, 58
               

               
Conread position:
               
163-356
               

               
Cow position:
               
chr9:9311973-9311779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
165, 122
               

               
Conread position:
               
164-336
               

               
Cow position:
               
chr9:46664933-46664770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
166, 44
               

               
Conread position:
               
164-351
               

               
Cow position:
               
chr9:53109364-53109177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
163, 122
               

               
Conread position:
               
164-355
               

               
Cow position:
               
chr9:33584565-33584763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
24, 90
               

               
Conread position:
               
164-356
               

               
Cow position:
               
chr9:38645231-38645423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
48, 83
               

               
Conread position:
               
164-357
               

               
Cow position:
               
chr9:23955872-23956060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
165, 43
               

               
Conread position:
               
165-356
               

               
Cow position:
               
chr9:38941315-38941511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
166-336
               

               
Cow position:
               
chr9:42478373-42478540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
162, 23
               

               
Conread position:
               
166-336
               

               
Cow position:
               
chr9:52598614-52598779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
162, 52
               

               
Conread position:
               
166-337
               

               
Cow position:
               
chr9:28754929-28754758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
162, 118
               

               
Conread position:
               
167-348
               

               
Cow position:
               
chr9:50310659-50310832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
167-355
               

               
Cow position:
               
chr9:32981963-32982153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
107, 57
               

               
Conread position:
               
168-356
               

               
Cow position:
               
chr9:45171111-45171302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
50, 118
               

               
Conread position:
               
169-325
               

               
Cow position:
               
chr9:28263622-28263473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
169-376
               

               
Cow position:
               
chr9:55532923-55532718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
172-325
               

               
Cow position:
               
chr9:35547373-35547222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
172-336
               

               
Cow position:
               
chr9:28379071-28378910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 10
               

               
Conread position:
               
174-379
               

               
Cow position:
               
chr9:25400095-25400300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
175-372
               

               
Cow position:
               
chr9:54615201-54615395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
154, 14
               

               
Conread position:
               
178-351
               

               
Cow position:
               
chr9:48100895-48100721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
156, 107
               

               
Conread position:
               
179-336
               

               
Cow position:
               
chr9:13761199-13761041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 106
               

               
Conread position:
               
179-351
               

               
Cow position:
               
chr9:9460072-9459909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
115, 28
               

               
Conread position:
               
179-377
               

               
Cow position:
               
chr9:29194926-29195125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
150, 20
               

               
Conread position:
               
179-379
               

               
Cow position:
               
chr9:22461644-22461835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
151, 94
               

               
Conread position:
               
180-329
               

               
Cow position:
               
chr9:5342156-5342297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
180-336
               

               
Cow position:
               
chr9:5469958-5469808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
144, 33
               

               
Conread position:
               
180-351
               

               
Cow position:
               
chr9:42298281-42298118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
150, 41
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr9:62459464-62459288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
180-368
               

               
Cow position:
               
chr9:41781751-41781563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
182-302
               

               
Cow position:
               
chr9:13078517-13078398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
182-334
               

               
Cow position:
               
chr9:6954153-6954306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
182-370
               

               
Cow position:
               
chr9:35832522-35832711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
182-420
               

               
Cow position:
               
chr9:23797330-23797091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
147, 12
               

               
Conread position:
               
183-313
               

               
Cow position:
               
chr9:47470005-47469877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
183-356
               

               
Cow position:
               
chr9:8834037-8834206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
183-395
               

               
Cow position:
               
chr9:21383860-21384062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
147, 31
               

               
Conread position:
               
184-377
               

               
Cow position:
               
chr9:37199215-37199026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
143, 23
               

               
Conread position:
               
184-379
               

               
Cow position:
               
chr9:29819807-29819613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
159, 40
               

               
Conread position:
               
186-336
               

               
Cow position:
               
chr9:5163894-5164043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
141, 98
               

               
Conread position:
               
186-336
               

               
Cow position:
               
chr9:43342419-43342273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
144, 11
               

               
Conread position:
               
186-368
               

               
Cow position:
               
chr9:58662328-58662153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
143, 32
               

               
Conread position:
               
186-382
               

               
Cow position:
               
chr9:5649883-5650079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
142, 98
               

               
Conread position:
               
187-336
               

               
Cow position:
               
chr9:40776886-40776740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
145, 32
               

               
Conread position:
               
187-415
               

               
Cow position:
               
chr9:38289236-38289461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
143, 37
               

               
Conread position:
               
188-349
               

               
Cow position:
               
chr9:5110947-5110787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
188-355
               

               
Cow position:
               
chr9:34024789-34024621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
141, 96
               

               
Conread position:
               
188-370
               

               
Cow position:
               
chr9:24652499-24652309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
190-336
               

               
Cow position:
               
chr9:33542142-33541997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
138, 17
               

               
Conread position:
               
192-377
               

               
Cow position:
               
chr9:33838227-33838419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
136, 93
               

               
Conread position:
               
192-379
               

               
Cow position:
               
chr9:7805879-7806067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
138, 25
               

               
Conread position:
               
193-371
               

               
Cow position:
               
chr9:1350137-1349952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
195-379
               

               
Cow position:
               
chr9:41785292-41785108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
134, 18
               

               
Conread position:
               
199-387
               

               
Cow position:
               
chr9:24429017-24429200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
201-356
               

               
Cow position:
               
chr9:12337983-12337823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 87
               

               
Conread position:
               
203-310
               

               
Cow position:
               
chr9:5210932-5211038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
204-368
               

               
Cow position:
               
chr9:49545294-49545455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 58
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr9:623424-623264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
122, 78
               

               
Conread position:
               
208-354
               

               
Cow position:
               
chr9:63361649-63361796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
121, 76
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr9:52828727-52828516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
121, 76
               

               
Conread position:
               
209-351
               

               
Cow position:
               
chr9:52257999-52258136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
121, 15
               

               
Conread position:
               
211-377
               

               
Cow position:
               
chr9:47214478-47214646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
117, 74
               

               
Conread position:
               
211-393
               

               
Cow position:
               
chr9:8992112-8992294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
117, 73
               

               
Conread position:
               
212-356
               

               
Cow position:
               
chr9:23970830-23970976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
89, 72
               

               
Conread position:
               
212-379
               

               
Cow position:
               
chr9:12786407-12786589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
117, 73
               

               
Conread position:
               
213-370
               

               
Cow position:
               
chr9:39758583-39758425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
116, 71
               

               
Conread position:
               
215-368
               

               
Cow position:
               
chr9:52518760-52518916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
60, 72
               

               
Conread position:
               
215-379
               

               
Cow position:
               
chr9:48017044-48016876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
216-334
               

               
Cow position:
               
chr9:44584655-44584537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
113, 68
               

               
Conread position:
               
217-349
               

               
Cow position:
               
chr9:41964673-41964805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
6, 68
               

               
Conread position:
               
218-354
               

               
Cow position:
               
chr9:4241466-4241327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
111, 66
               

               
Conread position:
               
218-379
               

               
Cow position:
               
chr9:33347430-33347594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 66
               

               
Conread position:
               
219-329
               

               
Cow position:
               
chr9:31098825-31098936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
219-356
               

               
Cow position:
               
chr9:58368938-58369075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
219-375
               

               
Cow position:
               
chr9:28156752-28156591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
108, 75
               

               
Conread position:
               
221-355
               

               
Cow position:
               
chr9:52763703-52763836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
107, 64
               

               
Conread position:
               
221-356
               

               
Cow position:
               
chr9:19758776-19758641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
222-320
               

               
Cow position:
               
chr9:5072782-5072879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
222-356
               

               
Cow position:
               
chr9:56827537-56827397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
223-379
               

               
Cow position:
               
chr9:42586501-42586661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
106, 61
               

               
Conread position:
               
224-366
               

               
Cow position:
               
chr9:904248-904384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
107, 60
               

               
Conread position:
               
225-418
               

               
Cow position:
               
chr9:25375683-25375879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 59
               

               
Conread position:
               
227-364
               

               
Cow position:
               
chr9:34484646-34484510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
103, 58
               

               
Conread position:
               
227-379
               

               
Cow position:
               
chr9:39135577-39135733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
228-367
               

               
Cow position:
               
chr9:13742573-13742433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
101, 56
               

               
Conread position:
               
230-336
               

               
Cow position:
               
chr9:27345536-27345642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
231-336
               

               
Cow position:
               
chr9:34014202-34014307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
232-356
               

               
Cow position:
               
chr9:24243675-24243802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 52
               

               
Conread position:
               
234-367
               

               
Cow position:
               
chr9:32089433-32089298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
57, 61
               

               
Conread position:
               
234-370
               

               
Cow position:
               
chr9:22165669-22165807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 51
               

               
Conread position:
               
235-379
               

               
Cow position:
               
chr9:60355169-60355313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
236-356
               

               
Cow position:
               
chr9:6293637-6293516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
236-356
               

               
Cow position:
               
chr9:55354653-55354532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
238-420
               

               
Cow position:
               
chr9:29792186-29792374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 42
               

               
Conread position:
               
240-402
               

               
Cow position:
               
chr9:35793715-35793558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
248-354
               

               
Cow position:
               
chr9:34707282-34707388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
258-389
               

               
Cow position:
               
chr9:19718320-19718453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
70, 26
               
Show alignments to all cow chromosomes.