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Cow genome map

           
Conread name:
           
Ss1.1-rmgp028_b8.5
        

               
Conread position:
               
1-98
               

               
Cow position:
               
chr19:5434431-5434334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-98
               

               
Cow position:
               
chr19:10080454-10080551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-99
               

               
Cow position:
               
chr19:4447271-4447369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-100
               

               
Cow position:
               
chr19:34165709-34165808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-107
               

               
Cow position:
               
chr19:19868121-19868014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-107
               

               
Cow position:
               
chr19:47187539-47187432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-109
               

               
Cow position:
               
chr19:43418005-43418109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-110
               

               
Cow position:
               
chr19:33115662-33115770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-115
               

               
Cow position:
               
chr19:729422-729537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr19:40790409-40790290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr19:10213005-10213127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr19:33509127-33509005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr19:41584315-41584430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
100, 74
               

               
Conread position:
               
1-125
               

               
Cow position:
               
chr19:39610098-39609974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
100, 60
               

               
Conread position:
               
1-133
               

               
Cow position:
               
chr19:5043749-5043616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr19:1294818-1294953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr19:2026723-2026867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr19:13635662-13635797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr19:15442245-15442383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
122, 74
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr19:10752852-10752708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr19:7473004-7473145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr19:51393361-51393514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr19:33286874-33287038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr19:9093388-9093214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr19:7170226-7170047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr19:36189837-36190009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
100, 113
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr19:55011527-55011704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr19:12416458-12416283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 122
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr19:15137084-15137260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
100, 121
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr19:31819316-31819122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 151
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr19:1011505-1011687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
101, 88
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr19:39338914-39338734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
100, 74
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr19:43189787-43189604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr19:11487979-11487794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
97, 36
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr19:25655762-25655573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 69
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr19:2267212-2267016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr19:6544746-6544550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr19:31728049-31728245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr19:35288111-35287919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr19:37333151-37333348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 60
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr19:48478588-48478793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr19:48556870-48557070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 37
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr19:129909-129712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr19:12652830-12653026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr19:23045407-23045608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr19:24669745-24669548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr19:41035540-41035343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr19:52667748-52667938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:7901-8099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:176446-176644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:432013-432205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
132, 75
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:434252-434055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:570889-571087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:777471-777669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:930774-930971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
100, 93
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:1582264-1582066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:2306841-2306643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:3249418-3249220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
100, 157
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:3819896-3819699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
101, 78
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:3858458-3858262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:4340286-4340086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:4460790-4460592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:4895801-4895603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:7136586-7136783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:8206064-8205866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:8371358-8371160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:10947990-10947789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:11395339-11395141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:11817306-11817109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:12712257-12712059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
101, 85
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:14158567-14158765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:15797591-15797789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:18076937-18076739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:19500738-19500542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
101, 145
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:20612157-20612355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:20690412-20690611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:21348768-21348966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:23383394-23383594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
92, 179
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:23393593-23393790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:23488709-23488907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:25041706-25041506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:25146959-25146762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:25168668-25168472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 142
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:25955216-25955021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 87
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:27081236-27081038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:27095754-27095952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:27997905-27997707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:28794026-28793827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:29980523-29980325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:30518677-30518874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:33118769-33118571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:33265918-33265720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:34905370-34905174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:34970976-34971174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:35362604-35362406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:39181586-39181388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:43149536-43149733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:43175528-43175330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:44488996-44489184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:48534675-48534872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 93
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:51992519-51992321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:52214716-52214909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
130, 88
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:54762327-54762524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:55163702-55163504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:55238877-55238679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:55625243-55625046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:55843949-55844147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr19:4279390-4279590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr19:6556573-6556781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 95
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr19:8496677-8496478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr19:39395669-39395871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr19:39876892-39876691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr19:40848535-40848333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr19:42609336-42609536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr19:44215678-44215486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
95, 122
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr19:46693773-46693976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr19:54984698-54984894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr19:27087429-27087631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
101, 56
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr19:35311014-35310822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
144, 77
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr19:39583833-39583635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
99, 87
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr19:42725977-42726181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr19:46918465-46918673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr19:34287434-34287657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 151
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr19:25288950-25288719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr19:19173734-19173972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
100, 12
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr19:14623958-14623732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
100, 200
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr19:40015659-40015428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr19:20093580-20093338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr19:46822066-46822317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr19:4599704-4599978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr19:7612253-7612539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
104, 9
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr19:38755924-38756197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 19
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr19:27347024-27346715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr19:46181186-46180860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr19:48409140-48409469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 32
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr19:24688912-24689246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
73, 56
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr19:10786734-10786369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 9
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr19:1901380-1900998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 330
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr19:53463545-53463183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 229
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr19:18788478-18788087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
138, 100
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr19:47727945-47727556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 143
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr19:8839221-8839627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr19:35380922-35380499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
100, 77
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr19:29071096-29070664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 259
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr19:4445995-4445551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr19:21380295-21379871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 75
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr19:43440798-43441244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
101, 53
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr19:51401387-51400938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 274
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr19:54294960-54294529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 247
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr19:36977292-36976835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
100, 66
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr19:12777176-12777617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
100, 87
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr19:17274092-17273661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 9
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr19:29476920-29477376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
100, 170
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr19:33945494-33945942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
100, 200
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr19:47109655-47110120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr19:7543045-7543495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 185
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr19:56382772-56383251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
134, 101
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr19:20671281-20670805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 203
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr19:35539929-35540401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr19:53657528-53657994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr19:11424668-11424195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 154
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr19:47118856-47118386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 46
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr19:25696582-25696110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 135
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr19:36721958-36722435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 99
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr19:13840017-13840496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 131
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr19:16566782-16567292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 146
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr19:386772-387278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 82
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr19:18786701-18786164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 55
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr19:56150434-56149917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 103
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr19:23785813-23786326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr19:44144282-44143782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 87
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr19:14473155-14472610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 199
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr19:32178086-32177541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 109
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr19:38842922-38842389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 62
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr19:742550-742005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr19:1355236-1355775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 241
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chr19:39661919-39661368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 62
               

               
Conread position:
               
1-527
               

               
Cow position:
               
chr19:28014104-28014653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 70
               

               
Conread position:
               
1-527
               

               
Cow position:
               
chr19:34956074-34955542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 317
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:255170-254626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 318
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:730107-729576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 246
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:3246411-3245883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 153
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:6688382-6687825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 209
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:8127940-8128480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 69
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:9582929-9583448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 229
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:15068370-15067837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 172
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:15437732-15438277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 287
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:19804909-19804349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 301
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:20661794-20661240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 165
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:23832937-23832415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:33033829-33033272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
91, 437
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:35018622-35018059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 135
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:39576946-39576402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 369
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:39623159-39622612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 36
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:39751100-39751643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 106
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:43431695-43431150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 88
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr19:44571755-44572260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 88
               

               
Conread position:
               
2-119
               

               
Cow position:
               
chr19:14180047-14179930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-134
               

               
Cow position:
               
chr19:34911278-34911411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
2-144
               

               
Cow position:
               
chr19:30471857-30471717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
2-194
               

               
Cow position:
               
chr19:37654439-37654637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
2-195
               

               
Cow position:
               
chr19:14572995-14573192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
2-195
               

               
Cow position:
               
chr19:30746026-30746220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
99, 135
               

               
Conread position:
               
2-195
               

               
Cow position:
               
chr19:31396266-31396072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
2-195
               

               
Cow position:
               
chr19:33674725-33674527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
2-200
               

               
Cow position:
               
chr19:7189986-7189792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
135, 48
               

               
Conread position:
               
2-200
               

               
Cow position:
               
chr19:22508834-22508643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr19:208452-208662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 198
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr19:11778294-11778517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
2-265
               

               
Cow position:
               
chr19:18115517-18115261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
232, 58
               

               
Conread position:
               
2-291
               

               
Cow position:
               
chr19:24956804-24956511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
197, 73
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr19:28038993-28038696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
2-377
               

               
Cow position:
               
chr19:20693108-20693521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
81, 150
               

               
Conread position:
               
2-385
               

               
Cow position:
               
chr19:4448165-4448572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
2-404
               

               
Cow position:
               
chr19:31873731-31874169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
2-427
               

               
Cow position:
               
chr19:42240665-42240224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
2-523
               

               
Cow position:
               
chr19:33747477-33748020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 199
               

               
Conread position:
               
2-524
               

               
Cow position:
               
chr19:22778830-22779381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 69
               

               
Conread position:
               
2-526
               

               
Cow position:
               
chr19:53543248-53542718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
2-527
               

               
Cow position:
               
chr19:2589138-2589686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 115
               

               
Conread position:
               
2-527
               

               
Cow position:
               
chr19:44839269-44838769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 53
               

               
Conread position:
               
2-528
               

               
Cow position:
               
chr19:43703070-43702515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
3-528
               

               
Cow position:
               
chr19:11821026-11820487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
127, 77
               

               
Conread position:
               
5-90
               

               
Cow position:
               
chr19:35142699-35142614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-98
               

               
Cow position:
               
chr19:36844853-36844946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-119
               

               
Cow position:
               
chr19:25901421-25901532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
96, 70
               

               
Conread position:
               
5-119
               

               
Cow position:
               
chr19:55783581-55783693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
96, 83
               

               
Conread position:
               
5-126
               

               
Cow position:
               
chr19:55247073-55247192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 65
               

               
Conread position:
               
5-142
               

               
Cow position:
               
chr19:56093748-56093886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
98, 59
               

               
Conread position:
               
5-147
               

               
Cow position:
               
chr19:14347603-14347745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 96
               

               
Conread position:
               
5-156
               

               
Cow position:
               
chr19:39649655-39649500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
5-168
               

               
Cow position:
               
chr19:18045725-18045561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
96, 112
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr19:49358749-49358583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 47
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr19:2260504-2260306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr19:12170982-12170790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr19:39077955-39078148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr19:2821205-2821399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr19:15233393-15233587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr19:19499925-19499735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 131
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr19:21114934-21115128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr19:25093766-25093572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr19:33306727-33306917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr19:53343143-53342950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
98, 85
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr19:17884126-17884311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
97, 110
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr19:38558774-38558576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
126, 67
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr19:15711673-15711939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
94, 52
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr19:42647433-42647171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 56
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr19:42777526-42777801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 209
               

               
Conread position:
               
5-280
               

               
Cow position:
               
chr19:13211525-13211794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr19:25048973-25048688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
130, 97
               

               
Conread position:
               
5-306
               

               
Cow position:
               
chr19:38396656-38396328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
89, 187
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr19:27348633-27348320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 34
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr19:37562377-37562050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
5-313
               

               
Cow position:
               
chr19:31826729-31827055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
96, 294
               

               
Conread position:
               
5-358
               

               
Cow position:
               
chr19:55725069-55724697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
96, 55
               

               
Conread position:
               
5-397
               

               
Cow position:
               
chr19:373561-373151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 5
               

               
Conread position:
               
5-400
               

               
Cow position:
               
chr19:37647213-37646792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 52
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr19:7065836-7066225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 16
               

               
Conread position:
               
5-417
               

               
Cow position:
               
chr19:38907718-38907295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
5-423
               

               
Cow position:
               
chr19:31825398-31824946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 409
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr19:25999263-25999688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 20
               

               
Conread position:
               
5-427
               

               
Cow position:
               
chr19:4195356-4195786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 247
               

               
Conread position:
               
5-432
               

               
Cow position:
               
chr19:2734079-2734526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 86
               

               
Conread position:
               
5-432
               

               
Cow position:
               
chr19:3833933-3834349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 183
               

               
Conread position:
               
5-435
               

               
Cow position:
               
chr19:11586242-11585789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
95, 281
               

               
Conread position:
               
5-446
               

               
Cow position:
               
chr19:36125215-36125680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 122
               

               
Conread position:
               
5-454
               

               
Cow position:
               
chr19:5656483-5656023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 268
               

               
Conread position:
               
5-459
               

               
Cow position:
               
chr19:34620404-34619923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 49
               

               
Conread position:
               
5-473
               

               
Cow position:
               
chr19:8375672-8375182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
5-492
               

               
Cow position:
               
chr19:23222271-23222763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 58
               

               
Conread position:
               
5-506
               

               
Cow position:
               
chr19:47773277-47772775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 40
               

               
Conread position:
               
5-506
               

               
Cow position:
               
chr19:51267535-51268037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
5-512
               

               
Cow position:
               
chr19:25086153-25086670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 148
               

               
Conread position:
               
5-524
               

               
Cow position:
               
chr19:31378993-31378439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 296
               

               
Conread position:
               
5-525
               

               
Cow position:
               
chr19:24061924-24062443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 268
               

               
Conread position:
               
5-525
               

               
Cow position:
               
chr19:39056872-39057417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 312
               

               
Conread position:
               
5-527
               

               
Cow position:
               
chr19:7637595-7637064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 84
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr19:2771384-2770837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
95, 199
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr19:14253262-14253807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 56
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr19:16096927-16096381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 295
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr19:22765245-22765784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 44
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr19:23304878-23304317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 247
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr19:34654948-34654438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 42
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr19:36221563-36222105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 171
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr19:53623192-53623741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
126, 49
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr19:55357686-55358212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
106, 44
               

               
Conread position:
               
6-108
               

               
Cow position:
               
chr19:36730310-36730413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-120
               

               
Cow position:
               
chr19:8567320-8567435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-126
               

               
Cow position:
               
chr19:29367488-29367609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-126
               

               
Cow position:
               
chr19:29624995-29625116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-135
               

               
Cow position:
               
chr19:10966951-10966817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
6-136
               

               
Cow position:
               
chr19:5756993-5757125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-137
               

               
Cow position:
               
chr19:673540-673673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-138
               

               
Cow position:
               
chr19:35082189-35082323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-139
               

               
Cow position:
               
chr19:49595202-49595067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-146
               

               
Cow position:
               
chr19:3228428-3228570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-157
               

               
Cow position:
               
chr19:42571625-42571472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-186
               

               
Cow position:
               
chr19:42156535-42156717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-187
               

               
Cow position:
               
chr19:26518376-26518197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 126
               

               
Conread position:
               
6-190
               

               
Cow position:
               
chr19:50047767-50047581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
49, 43
               

               
Conread position:
               
6-195
               

               
Cow position:
               
chr19:2065857-2066046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 59
               

               
Conread position:
               
6-195
               

               
Cow position:
               
chr19:15870338-15870147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
6-195
               

               
Cow position:
               
chr19:18888049-18887862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
102, 95
               

               
Conread position:
               
6-195
               

               
Cow position:
               
chr19:25637863-25637681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:42296-42489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:235784-235591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:431015-430825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
95, 120
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:485563-485370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:634350-634542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 136
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:1168963-1168772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:1278888-1279081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:2467515-2467322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:3106372-3106179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:3473138-3473331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:4283338-4283145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:5679691-5679498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:5731314-5731507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:5887441-5887248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:6532419-6532612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:6929570-6929763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:7407527-7407720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:7760886-7760693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:10194395-10194202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:10614185-10614378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:11089477-11089284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:11935095-11935287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 21
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:16567362-16567555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:18695486-18695293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:18824455-18824262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:20001700-20001507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:20108338-20108531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:21137064-21136860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:22076425-22076618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:23462992-23462803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
95, 141
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:23665375-23665568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:26979269-26979076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:29394262-29394455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:30515082-30514889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:30540433-30540240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:32164583-32164390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:33304247-33304440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:37633724-37633531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:39924296-39924488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
60, 99
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:39960081-39959892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
95, 124
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:40805640-40805447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:41223703-41223510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:42062371-42062178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:42304661-42304468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:46240895-46240702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:46526213-46526020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:46815354-46815547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:50177458-50177649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
95, 131
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:50610392-50610585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:52147482-52147291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 165
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:54006544-54006739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr19:54375961-54375769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
96, 84
               

               
Conread position:
               
6-199
               

               
Cow position:
               
chr19:24735097-24735292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-199
               

               
Cow position:
               
chr19:24927977-24927786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
94, 82
               

               
Conread position:
               
6-199
               

               
Cow position:
               
chr19:38680790-38680983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 161
               

               
Conread position:
               
6-199
               

               
Cow position:
               
chr19:40883289-40883094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-200
               

               
Cow position:
               
chr19:12471672-12471476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-212
               

               
Cow position:
               
chr19:40439550-40439762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-214
               

               
Cow position:
               
chr19:12613899-12613685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr19:17823682-17823462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
95, 122
               

               
Conread position:
               
6-249
               

               
Cow position:
               
chr19:2249524-2249279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
95, 195
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr19:35621996-35622348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 45
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr19:1504774-1505146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 92
               

               
Conread position:
               
6-411
               

               
Cow position:
               
chr19:42417495-42417920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
95, 320
               

               
Conread position:
               
6-502
               

               
Cow position:
               
chr19:30551674-30552159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 204
               

               
Conread position:
               
6-525
               

               
Cow position:
               
chr19:25054043-25053491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 55
               

               
Conread position:
               
7-147
               

               
Cow position:
               
chr19:1801112-1801252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 52
               

               
Conread position:
               
7-195
               

               
Cow position:
               
chr19:541372-541182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
95, 88
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr19:736549-736742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr19:3511051-3511243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr19:7346342-7346533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr19:11004002-11003809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr19:13755520-13755711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr19:52457122-52456940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
123, 69
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr19:53322145-53322336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
7-199
               

               
Cow position:
               
chr19:41139775-41139579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
7-234
               

               
Cow position:
               
chr19:5934800-5934563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
94, 193
               

               
Conread position:
               
7-275
               

               
Cow position:
               
chr19:16594527-16594815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
7-435
               

               
Cow position:
               
chr19:12608268-12607818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
94, 307
               

               
Conread position:
               
7-438
               

               
Cow position:
               
chr19:3084572-3084124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
95, 57
               

               
Conread position:
               
7-528
               

               
Cow position:
               
chr19:267980-268520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 156
               

               
Conread position:
               
7-528
               

               
Cow position:
               
chr19:10754942-10755473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 91
               

               
Conread position:
               
8-117
               

               
Cow position:
               
chr19:164188-164078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
8-190
               

               
Cow position:
               
chr19:35305522-35305341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
128, 5
               

               
Conread position:
               
8-197
               

               
Cow position:
               
chr19:9293895-9294090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
94, 5
               

               
Conread position:
               
8-231
               

               
Cow position:
               
chr19:20316240-20316010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
171, 6
               

               
Conread position:
               
8-409
               

               
Cow position:
               
chr19:42205561-42205979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
73, 134
               

               
Conread position:
               
10-119
               

               
Cow position:
               
chr19:3407144-3407254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-135
               

               
Cow position:
               
chr19:888837-888711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-135
               

               
Cow position:
               
chr19:35568855-35568981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
10-137
               

               
Cow position:
               
chr19:15719935-15719808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
10-168
               

               
Cow position:
               
chr19:12788012-12788171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 91
               

               
Conread position:
               
10-173
               

               
Cow position:
               
chr19:39978777-39978613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
92, 86
               

               
Conread position:
               
10-182
               

               
Cow position:
               
chr19:30237667-30237841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-195
               

               
Cow position:
               
chr19:41324721-41324906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
90, 53
               

               
Conread position:
               
10-196
               

               
Cow position:
               
chr19:101646-101458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr19:5733446-5733632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
135, 88
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr19:15071251-15071440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr19:33877450-33877639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr19:36352233-36352421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr19:39952302-39952113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr19:54484351-54484540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-200
               

               
Cow position:
               
chr19:31385871-31385680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
114, 91
               

               
Conread position:
               
10-226
               

               
Cow position:
               
chr19:23682239-23682024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
91, 122
               

               
Conread position:
               
10-313
               

               
Cow position:
               
chr19:3489129-3489457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
91, 277
               

               
Conread position:
               
10-367
               

               
Cow position:
               
chr19:8212210-8211825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 366
               

               
Conread position:
               
10-373
               

               
Cow position:
               
chr19:39697705-39698081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 127
               

               
Conread position:
               
10-410
               

               
Cow position:
               
chr19:4389744-4390161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
91, 228
               

               
Conread position:
               
10-479
               

               
Cow position:
               
chr19:17795526-17796022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 31
               

               
Conread position:
               
10-497
               

               
Cow position:
               
chr19:12697959-12698462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 79
               

               
Conread position:
               
10-512
               

               
Cow position:
               
chr19:32457275-32457800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
10-528
               

               
Cow position:
               
chr19:29627734-29627210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 54
               

               
Conread position:
               
12-143
               

               
Cow position:
               
chr19:49420485-49420352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
12-163
               

               
Cow position:
               
chr19:51611266-51611417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 29
               

               
Conread position:
               
12-168
               

               
Cow position:
               
chr19:10160723-10160879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 145
               

               
Conread position:
               
12-177
               

               
Cow position:
               
chr19:48393031-48393201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
105, 89
               

               
Conread position:
               
12-195
               

               
Cow position:
               
chr19:5862780-5862600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
12-197
               

               
Cow position:
               
chr19:7475954-7475767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
12-248
               

               
Cow position:
               
chr19:21587574-21587813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
12-421
               

               
Cow position:
               
chr19:34425219-34425644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 56
               

               
Conread position:
               
12-528
               

               
Cow position:
               
chr19:41945846-41946354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 70
               

               
Conread position:
               
13-97
               

               
Cow position:
               
chr19:29366693-29366777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
85
               

               
Alignm identity:
               
74
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-97
               

               
Cow position:
               
chr19:29624201-29624285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
85
               

               
Alignm identity:
               
74
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-119
               

               
Cow position:
               
chr19:53792024-53791917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
13-128
               

               
Cow position:
               
chr19:32753472-32753588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
13-144
               

               
Cow position:
               
chr19:14256511-14256641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
123, 80
               

               
Conread position:
               
13-177
               

               
Cow position:
               
chr19:21082779-21082612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
13-190
               

               
Cow position:
               
chr19:12375409-12375223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
13-194
               

               
Cow position:
               
chr19:23251170-23250987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
13-194
               

               
Cow position:
               
chr19:23709887-23709706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
13-195
               

               
Cow position:
               
chr19:6177251-6177441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
13-195
               

               
Cow position:
               
chr19:12907220-12907034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
13-195
               

               
Cow position:
               
chr19:16186700-16186516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
13-195
               

               
Cow position:
               
chr19:20699721-20699908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
13-195
               

               
Cow position:
               
chr19:28974625-28974809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
13-195
               

               
Cow position:
               
chr19:40714795-40714975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 119
               

               
Conread position:
               
13-195
               

               
Cow position:
               
chr19:44167367-44167548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 158
               

               
Conread position:
               
13-197
               

               
Cow position:
               
chr19:36420050-36420231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 90
               

               
Conread position:
               
13-197
               

               
Cow position:
               
chr19:38392434-38392619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
13-197
               

               
Cow position:
               
chr19:54542026-54541840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
13-199
               

               
Cow position:
               
chr19:3177748-3177927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
89, 34
               

               
Conread position:
               
13-199
               

               
Cow position:
               
chr19:31266140-31265954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 7
               

               
Conread position:
               
13-200
               

               
Cow position:
               
chr19:12208954-12208764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
13-200
               

               
Cow position:
               
chr19:24005014-24005203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
13-203
               

               
Cow position:
               
chr19:25659130-25659321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 75
               

               
Conread position:
               
13-241
               

               
Cow position:
               
chr19:6892142-6891903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
13-259
               

               
Cow position:
               
chr19:42762722-42762986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
89, 44
               

               
Conread position:
               
13-262
               

               
Cow position:
               
chr19:12233787-12234038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
88, 188
               

               
Conread position:
               
13-270
               

               
Cow position:
               
chr19:39453370-39453117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 125
               

               
Conread position:
               
13-322
               

               
Cow position:
               
chr19:3124421-3124089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 318
               

               
Conread position:
               
13-358
               

               
Cow position:
               
chr19:33932508-33932146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
13-398
               

               
Cow position:
               
chr19:42664186-42663779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 286
               

               
Conread position:
               
13-435
               

               
Cow position:
               
chr19:21336618-21336170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
88, 309
               

               
Conread position:
               
13-435
               

               
Cow position:
               
chr19:41673607-41673163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 356
               

               
Conread position:
               
13-478
               

               
Cow position:
               
chr19:8033374-8033870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 365
               

               
Conread position:
               
13-528
               

               
Cow position:
               
chr19:5185618-5185086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
13-528
               

               
Cow position:
               
chr19:13267551-13267034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 376
               

               
Conread position:
               
13-528
               

               
Cow position:
               
chr19:24358587-24358088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
13-528
               

               
Cow position:
               
chr19:30232377-30232882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 58
               

               
Conread position:
               
14-122
               

               
Cow position:
               
chr19:11058283-11058173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
14-166
               

               
Cow position:
               
chr19:11148098-11147948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 25
               

               
Conread position:
               
14-177
               

               
Cow position:
               
chr19:35087938-35088102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
87, 60
               

               
Conread position:
               
14-195
               

               
Cow position:
               
chr19:345361-345544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
14-197
               

               
Cow position:
               
chr19:37843825-37843643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
87, 74
               

               
Conread position:
               
14-242
               

               
Cow position:
               
chr19:2491248-2491017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 98
               

               
Conread position:
               
14-288
               

               
Cow position:
               
chr19:594-850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 34
               

               
Conread position:
               
14-433
               

               
Cow position:
               
chr19:19673055-19673480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 318
               

               
Conread position:
               
15-111
               

               
Cow position:
               
chr19:51644899-51644802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
15-173
               

               
Cow position:
               
chr19:3584237-3584078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
87, 57
               

               
Conread position:
               
15-195
               

               
Cow position:
               
chr19:12869252-12869070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
15-195
               

               
Cow position:
               
chr19:16135972-16135796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
121, 87
               

               
Conread position:
               
15-195
               

               
Cow position:
               
chr19:30759503-30759679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
15-196
               

               
Cow position:
               
chr19:21198764-21198947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
15-203
               

               
Cow position:
               
chr19:48218394-48218198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
15-204
               

               
Cow position:
               
chr19:33653604-33653787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 60
               

               
Conread position:
               
15-313
               

               
Cow position:
               
chr19:33281014-33281314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
184, 71
               

               
Conread position:
               
15-337
               

               
Cow position:
               
chr19:27104389-27104716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 62
               

               
Conread position:
               
15-358
               

               
Cow position:
               
chr19:1580943-1580585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 117
               

               
Conread position:
               
15-372
               

               
Cow position:
               
chr19:36176377-36176765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
16-187
               

               
Cow position:
               
chr19:34282965-34283135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
117, 47
               

               
Conread position:
               
16-193
               

               
Cow position:
               
chr19:15460699-15460876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
85, 77
               

               
Conread position:
               
16-194
               

               
Cow position:
               
chr19:29089851-29090030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
87, 111
               

               
Conread position:
               
16-528
               

               
Cow position:
               
chr19:54942615-54943138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 55
               

               
Conread position:
               
17-265
               

               
Cow position:
               
chr19:426602-426352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
78, 112
               

               
Conread position:
               
19-177
               

               
Cow position:
               
chr19:54052695-54052536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
20-177
               

               
Cow position:
               
chr19:52678829-52678985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
116, 79
               

               
Conread position:
               
20-512
               

               
Cow position:
               
chr19:11171576-11171060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 127
               

               
Conread position:
               
22-195
               

               
Cow position:
               
chr19:15883529-15883355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 73
               

               
Conread position:
               
22-469
               

               
Cow position:
               
chr19:29115402-29115859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
23-138
               

               
Cow position:
               
chr19:33806551-33806668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
23-196
               

               
Cow position:
               
chr19:11232282-11232110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
23-196
               

               
Cow position:
               
chr19:29416510-29416685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
23-197
               

               
Cow position:
               
chr19:7978913-7978740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
78, 121
               

               
Conread position:
               
23-197
               

               
Cow position:
               
chr19:10638868-10638691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
23-197
               

               
Cow position:
               
chr19:16316427-16316251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
23-197
               

               
Cow position:
               
chr19:18476600-18476776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
23-197
               

               
Cow position:
               
chr19:35416321-35416148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
23-245
               

               
Cow position:
               
chr19:35148691-35148474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
23-305
               

               
Cow position:
               
chr19:43066824-43067116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 32
               
UCSC Genome Browser

               
Conread position:
               
23-358
               

               
Cow position:
               
chr19:38596265-38596620 (view  custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 15
               
UCSC Genome Browser

               
               
               
Conread position:
23-367

               
               
               
Cow position:
chr19:44757971-44757607 (view  custom track)

               
               
               
Alignm length:
366

               
               
               
Alignm identity:
263

               
               
               
Alignm E-value:
0

               
               
               
Alignm gaps (pig, cow):
80, 271
UCSC Genome Browser

               
               
               
Conread position:
23-433

               
               
               
Cow position:
chr19:53737983-53738411 (view  custom track)

               
               
               
Alignm length:
437

               
               
               
Alignm identity:
292

               
               
               
Alignm E-value:
1e-36

               
               
               
Alignm gaps (pig, cow):
78, 65

               
               
               Conread position:23-435
               
               
               Cow position:chr19:15863398-15862971 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:321
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):53, 307

               
               
               Conread position:23-506
               
               
               Cow position:chr19:52278812-52278311 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:511
               
               
               Alignm identity:341
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):78, 291

               
               
               Conread position:23-515
               
               
               Cow position:chr19:39245545-39246064 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:522
               
               
               Alignm identity:357
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):79, 279

               
               
               Conread position:23-528
               
               
               Cow position:chr19:25727233-25726713 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:532
               
               
               Alignm identity:372
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):64, 142

               
               
               Conread position:24-195
               
               
               Cow position:chr19:15697846-15697674 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:123
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):78, 47

               
               
               Conread position:24-200
               
               
               Cow position:chr19:40875729-40875545 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):22, 0

               
               
               Conread position:24-459
               
               
               Cow position:chr19:56063782-56063323 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:461
               
               
               Alignm identity:317
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):85, 79

               
               
               Conread position:25-170
               
               
               Cow position:chr19:22044038-22043895 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:121
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):77, 28

               
               
               Conread position:25-197
               
               
               Cow position:chr19:38479319-38479148 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:130
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):77, 90

               
               
               Conread position:25-463
               
               
               Cow position:chr19:14592701-14593167 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:472
               
               
               Alignm identity:346
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):77, 64

               
               
               Conread position:25-528
               
               
               Cow position:chr19:38340324-38339803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:533
               
               
               Alignm identity:373
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):77, 64

               
               
               Conread position:25-528
               
               
               Cow position:chr19:43058179-43058710 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:547
               
               
               Alignm identity:384
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):86, 25

               
               
               Conread position:26-131
               
               
               Cow position:chr19:1001005-1000899 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:107
               
               
               Alignm identity:93
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):75, 0

               
               
               Conread position:26-375
               
               
               Cow position:chr19:9508277-9508623 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:352
               
               
               Alignm identity:230
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):75, 175

               
               
               Conread position:26-460
               
               
               Cow position:chr19:4502854-4503327 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:480
               
               
               Alignm identity:337
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):70, 37

               
               
               Conread position:26-525
               
               
               Cow position:chr19:23005717-23005190 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:535
               
               
               Alignm identity:382
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):75, 304

               
               
               Conread position:27-195
               
               
               Cow position:chr19:54298221-54298051 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:27-197
               
               
               Cow position:chr19:8770894-8771070 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:130
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:27-197
               
               
               Cow position:chr19:50574141-50574313 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:132
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:27-203
               
               
               Cow position:chr19:6515910-6516087 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:152
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):75, 0

               
               
               Conread position:27-268
               
               
               Cow position:chr19:25025836-25025583 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:186
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):174, 54

               
               
               Conread position:27-435
               
               
               Cow position:chr19:10941950-10941544 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:422
               
               
               Alignm identity:285
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):104, 72

               
               
               Conread position:27-435
               
               
               Cow position:chr19:31594948-31595380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:434
               
               
               Alignm identity:326
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):75, 276

               
               
               Conread position:28-134
               
               
               Cow position:chr19:25750418-25750312 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:108
               
               
               Alignm identity:91
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):75, 84

               
               
               Conread position:28-233
               
               
               Cow position:chr19:682402-682186 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:158
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):73, 56

               
               
               Conread position:29-195
               
               
               Cow position:chr19:32683949-32684112 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:121
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):73, 55

               
               
               Conread position:29-197
               
               
               Cow position:chr19:15499163-15499333 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:132
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:29-197
               
               
               Cow position:chr19:53228794-53228965 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:123
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):73, 0

               
               
               Conread position:29-351
               
               
               Cow position:chr19:2138451-2138109 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:346
               
               
               Alignm identity:258
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):73, 38

               
               
               Conread position:31-213
               
               
               Cow position:chr19:14929019-14928829 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:158
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):71, 0

               
               
               Conread position:32-167
               
               
               Cow position:chr19:19963696-19963832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:122
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):69, 22

               
               
               Conread position:32-196
               
               
               Cow position:chr19:21178674-21178841 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:122
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):13, 63

               
               
               Conread position:33-197
               
               
               Cow position:chr19:43178619-43178454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:136
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):98, 61

               
               
               Conread position:33-435
               
               
               Cow position:chr19:39670012-39669589 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:281
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):68, 283

               
               
               Conread position:34-197
               
               
               Cow position:chr19:43358294-43358129 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:129
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:34-199
               
               
               Cow position:chr19:31783918-31784085 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:131
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):67, 0

               
               
               Conread position:34-528
               
               
               Cow position:chr19:46454506-46455013 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:525
               
               
               Alignm identity:357
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):68, 7

               
               
               Conread position:35-197
               
               
               Cow position:chr19:39254842-39254678 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:140
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):65, 5

               
               
               Conread position:35-382
               
               
               Cow position:chr19:3222460-3222831 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:375
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):67, 106

               
               
               Conread position:37-197
               
               
               Cow position:chr19:33114306-33114468 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:121
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:39-197
               
               
               Cow position:chr19:1308490-1308330 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:121
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):62, 0

               
               
               Conread position:40-200
               
               
               Cow position:chr19:29755244-29755083 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:123
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):60, 14

               
               
               Conread position:41-197
               
               
               Cow position:chr19:158201-158046 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:119
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):61, 48

               
               
               Conread position:41-197
               
               
               Cow position:chr19:10697797-10697953 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:131
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):62, 22

               
               
               Conread position:41-197
               
               
               Cow position:chr19:20686200-20686358 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:119
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:41-197
               
               
               Cow position:chr19:52774864-52775022 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:41-238
               
               
               Cow position:chr19:19490273-19490073 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:166
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):62, 48

               
               
               Conread position:41-249
               
               
               Cow position:chr19:22513504-22513714 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:145
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):60, 160

               
               
               Conread position:41-433
               
               
               Cow position:chr19:36461865-36461452 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:415
               
               
               Alignm identity:273
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):61, 392

               
               
               Conread position:41-500
               
               
               Cow position:chr19:23403987-23403497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:497
               
               
               Alignm identity:344
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):62, 221

               
               
               Conread position:41-528
               
               
               Cow position:chr19:55957906-55957395 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:519
               
               
               Alignm identity:348
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):87, 60

               
               
               Conread position:42-137
               
               
               Cow position:chr19:6022372-6022276 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:97
               
               
               Alignm identity:85
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:42-197
               
               
               Cow position:chr19:32619262-32619418 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:111
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:42-448
               
               
               Cow position:chr19:52773512-52773076 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:440
               
               
               Alignm identity:300
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):60, 238

               
               
               Conread position:42-528
               
               
               Cow position:chr19:26057883-26057379 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:514
               
               
               Alignm identity:306
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):60, 42

               
               
               Conread position:43-367
               
               
               Cow position:chr19:21092445-21092780 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:248
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):59, 195

               
               
               Conread position:43-493
               
               
               Cow position:chr19:12036838-12036362 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:479
               
               
               Alignm identity:339
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):59, 20

               
               
               Conread position:44-197
               
               
               Cow position:chr19:40900596-40900440 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:115
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:45-135
               
               
               Cow position:chr19:32140819-32140728 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:92
               
               
               Alignm identity:80
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:46-195
               
               
               Cow position:chr19:28921500-28921642 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:115
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):54, 13

               
               
               Conread position:46-197
               
               
               Cow position:chr19:26838690-26838843 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:115
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):55, 0

               
               
               Conread position:46-432
               
               
               Cow position:chr19:30533610-30534004 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:403
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 154

               
               
               Conread position:46-525
               
               
               Cow position:chr19:12601480-12601971 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:505
               
               
               Alignm identity:356
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 296

               
               
               Conread position:47-343
               
               
               Cow position:chr19:32955559-32955874 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:229
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):90, 18

               
               
               Conread position:48-357
               
               
               Cow position:chr19:630615-630923 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:230
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):53, 144

               
               
               Conread position:50-197
               
               
               Cow position:chr19:37502984-37502846 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:126
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):52, 87

               
               
               Conread position:50-478
               
               
               Cow position:chr19:4588048-4587613 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:441
               
               
               Alignm identity:313
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):52, 155

               
               
               Conread position:51-187
               
               
               Cow position:chr19:55453707-55453570 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:106
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):51, 39

               
               
               Conread position:52-197
               
               
               Cow position:chr19:9537349-9537492 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:113
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):50, 37

               
               
               Conread position:52-197
               
               
               Cow position:chr19:21705749-21705896 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:108
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:54-195
               
               
               Cow position:chr19:6968642-6968783 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:111
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):29, 9

               
               
               Conread position:54-195
               
               
               Cow position:chr19:26689824-26689960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:111
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):33, 0

               
               
               Conread position:54-264
               
               
               Cow position:chr19:31287868-31287663 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:155
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):38, 83

               
               
               Conread position:54-528
               
               
               Cow position:chr19:2577252-2577732 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:495
               
               
               Alignm identity:361
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):48, 118

               
               
               Conread position:54-528
               
               
               Cow position:chr19:50161696-50162167 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:489
               
               
               Alignm identity:312
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):48, 25

               
               
               Conread position:55-524
               
               
               Cow position:chr19:33912955-33912458 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:501
               
               
               Alignm identity:349
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):47, 18

               
               
               Conread position:56-197
               
               
               Cow position:chr19:12019135-12019279 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:56-200
               
               
               Cow position:chr19:53365372-53365518 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:107
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:56-224
               
               
               Cow position:chr19:11145930-11145761 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:119
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):80, 0

               
               
               Conread position:57-197
               
               
               Cow position:chr19:7884241-7884377 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:116
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):45, 19

               
               
               Conread position:57-199
               
               
               Cow position:chr19:11066129-11065985 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:113
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:58-498
               
               
               Cow position:chr19:47859613-47859169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:449
               
               
               Alignm identity:326
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):44, 134

               
               
               Conread position:59-528
               
               
               Cow position:chr19:27180575-27180068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:512
               
               
               Alignm identity:351
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):71, 41

               
               
               Conread position:60-195
               
               
               Cow position:chr19:29134797-29134933 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:106
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):42, 8

               
               
               Conread position:62-267
               
               
               Cow position:chr19:2944225-2944024 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:144
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):40, 74

               
               
               Conread position:63-512
               
               
               Cow position:chr19:8982871-8982423 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:461
               
               
               Alignm identity:302
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):39, 138

               
               
               Conread position:64-197
               
               
               Cow position:chr19:52196237-52196373 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:119
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:64-528
               
               
               Cow position:chr19:39104320-39103841 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:492
               
               
               Alignm identity:328
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):38, 48

               
               
               Conread position:65-528
               
               
               Cow position:chr19:6417287-6417780 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:498
               
               
               Alignm identity:347
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 433

               
               
               Conread position:66-528
               
               
               Cow position:chr19:13129582-13130036 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:480
               
               
               Alignm identity:346
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):118, 34

               
               
               Conread position:67-435
               
               
               Cow position:chr19:18843272-18842888 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:390
               
               
               Alignm identity:251
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):35, 251

               
               
               Conread position:67-478
               
               
               Cow position:chr19:35741846-35742281 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:439
               
               
               Alignm identity:312
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):36, 394

               
               
               Conread position:68-528
               
               
               Cow position:chr19:20622352-20622829 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:481
               
               
               Alignm identity:332
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):34, 69

               
               
               Conread position:68-528
               
               
               Cow position:chr19:24144709-24145193 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:493
               
               
               Alignm identity:329
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):13, 25

               
               
               Conread position:69-411
               
               
               Cow position:chr19:17479269-17478904 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:367
               
               
               Alignm identity:247
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):35, 303

               
               
               Conread position:70-454
               
               
               Cow position:chr19:9542205-9541799 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:413
               
               
               Alignm identity:278
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):32, 266

               
               
               Conread position:71-511
               
               
               Cow position:chr19:26086888-26087353 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:467
               
               
               Alignm identity:308
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):31, 263

               
               
               Conread position:72-478
               
               
               Cow position:chr19:16694351-16693903 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:450
               
               
               Alignm identity:321
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):112, 33

               
               
               Conread position:73-200
               
               
               Cow position:chr19:10964903-10964776 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:101
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):61, 50

               
               
               Conread position:73-391
               
               
               Cow position:chr19:24192099-24192416 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:226
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):29, 108

               
               
               Conread position:73-437
               
               
               Cow position:chr19:18750386-18749994 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:396
               
               
               Alignm identity:274
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):21, 138

               
               
               Conread position:75-528
               
               
               Cow position:chr19:5116170-5115720 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:469
               
               
               Alignm identity:302
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):42, 20

               
               
               Conread position:76-197
               
               
               Cow position:chr19:53418309-53418433 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:125
               
               
               Alignm identity:103
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:78-303
               
               
               Cow position:chr19:30925615-30925374 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:176
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):111, 24

               
               
               Conread position:79-370
               
               
               Cow position:chr19:4252271-4251956 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:223
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):23, 173

               
               
               Conread position:79-506
               
               
               Cow position:chr19:40051684-40051237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:452
               
               
               Alignm identity:333
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):23, 75

               
               
               Conread position:81-197
               
               
               Cow position:chr19:6610298-6610180 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:119
               
               
               Alignm identity:99
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:81-378
               
               
               Cow position:chr19:33858457-33858751 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:214
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):21, 72

               
               
               Conread position:83-196
               
               
               Cow position:chr19:2154368-2154255 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:115
               
               
               Alignm identity:102
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):47, 19

               
               
               Conread position:84-194
               
               
               Cow position:chr19:41187507-41187617 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:112
               
               
               Alignm identity:96
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):16, 53

               
               
               Conread position:85-528
               
               
               Cow position:chr19:29368107-29368567 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:470
               
               
               Alignm identity:311
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):50, 219

               
               
               Conread position:85-528
               
               
               Cow position:chr19:29625613-29626072 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:470
               
               
               Alignm identity:314
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):59, 45

               
               
               Conread position:86-434
               
               
               Cow position:chr19:55236201-55236563 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:371
               
               
               Alignm identity:247
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):16, 213

               
               
               Conread position:89-526
               
               
               Cow position:chr19:28451116-28451561 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:465
               
               
               Alignm identity:315
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):14, 192

               
               
               Conread position:90-197
               
               
               Cow position:chr19:17664353-17664461 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:109
               
               
               Alignm identity:95
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):12, 0

               
               
               Conread position:90-200
               
               
               Cow position:chr19:21042829-21042941 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:113
               
               
               Alignm identity:101
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):12, 0

               
               
               Conread position:90-293
               
               
               Cow position:chr19:53037441-53037215 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:165
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:92-519
               
               
               Cow position:chr19:41498264-41497832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:439
               
               
               Alignm identity:302
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):10, 107

               
               
               Conread position:93-292
               
               
               Cow position:chr19:53086014-53086216 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:145
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):38, 73

               
               
               Conread position:94-524
               
               
               Cow position:chr19:50562403-50562851 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:452
               
               
               Alignm identity:308
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):5, 9

               
               
               Conread position:94-528
               
               
               Cow position:chr19:15887605-15887144 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:466
               
               
               Alignm identity:325
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):5, 9

               
               
               Conread position:99-308
               
               
               Cow position:chr19:39794679-39794916 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:101-197
               
               
               Cow position:chr19:20433054-20432957 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:98
               
               
               Alignm identity:90
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):35, 0

               
               
               Conread position:101-300
               
               
               Cow position:chr19:18015981-18015773 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:152
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):102, 0

               
               
               Conread position:101-302
               
               
               Cow position:chr19:4537688-4537470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:170
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:101-333
               
               
               Cow position:chr19:47558086-47558322 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:163
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):35, 121

               
               
               Conread position:101-428
               
               
               Cow position:chr19:35064460-35064122 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:346
               
               
               Alignm identity:231
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):30, 45

               
               
               Conread position:101-435
               
               
               Cow position:chr19:40449756-40450097 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:346
               
               
               Alignm identity:243
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):83, 35

               
               
               Conread position:101-467
               
               
               Cow position:chr19:31846818-31846437 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:391
               
               
               Alignm identity:272
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):35, 67

               
               
               Conread position:101-473
               
               
               Cow position:chr19:8332019-8332419 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:403
               
               
               Alignm identity:272
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):93, 84

               
               
               Conread position:101-485
               
               
               Cow position:chr19:2208051-2207659 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:403
               
               
               Alignm identity:269
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):124, 98

               
               
               Conread position:101-509
               
               
               Cow position:chr19:19430955-19431374 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:438
               
               
               Alignm identity:293
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):30, 67

               
               
               Conread position:101-528
               
               
               Cow position:chr19:10080793-10081260 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:469
               
               
               Alignm identity:338
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):30, 202

               
               
               Conread position:101-528
               
               
               Cow position:chr19:20935479-20935925 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:454
               
               
               Alignm identity:311
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):10, 46

               
               
               Conread position:101-528
               
               
               Cow position:chr19:36059656-36060126 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:475
               
               
               Alignm identity:327
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):35, 195

               
               
               Conread position:102-199
               
               
               Cow position:chr19:54666932-54666834 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:99
               
               
               Alignm identity:85
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:102-484
               
               
               Cow position:chr19:1152949-1153337 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:402
               
               
               Alignm identity:276
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):88, 28

               
               
               Conread position:102-528
               
               
               Cow position:chr19:6079624-6079178 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:451
               
               
               Alignm identity:293
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):31, 91

               
               
               Conread position:102-528
               
               
               Cow position:chr19:7668424-7668867 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:454
               
               
               Alignm identity:316
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):32, 296

               
               
               Conread position:103-447
               
               
               Cow position:chr19:3496448-3496080 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:377
               
               
               Alignm identity:254
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):33, 52

               
               
               Conread position:104-468
               
               
               Cow position:chr19:19919730-19919347 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:389
               
               
               Alignm identity:283
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):93, 23

               
               
               Conread position:105-357
               
               
               Cow position:chr19:44125377-44125648 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:194
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):31, 19

               
               
               Conread position:105-455
               
               
               Cow position:chr19:33468753-33469123 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:376
               
               
               Alignm identity:280
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):26, 7

               
               
               Conread position:105-515
               
               
               Cow position:chr19:27612439-27612019 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:302
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):100, 179

               
               
               Conread position:105-527
               
               
               Cow position:chr19:48722754-48723204 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:461
               
               
               Alignm identity:313
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):27, 23

               
               
               Conread position:106-329
               
               
               Cow position:chr19:13390649-13390886 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:174
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):30, 162

               
               
               Conread position:106-513
               
               
               Cow position:chr19:5433832-5433421 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:441
               
               
               Alignm identity:309
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):30, 240

               
               
               Conread position:107-271
               
               
               Cow position:chr19:7492169-7492349 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:144
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):10, 0

               
               
               Conread position:107-400
               
               
               Cow position:chr19:10232672-10232365 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:224
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:107-412
               
               
               Cow position:chr19:33823047-33823376 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:226
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):24, 0

               
               
               Conread position:107-464
               
               
               Cow position:chr19:43418151-43418516 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:377
               
               
               Alignm identity:265
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):24, 39

               
               
               Conread position:107-475
               
               
               Cow position:chr19:13316671-13316300 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:261
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):51, 173

               
               
               Conread position:107-477
               
               
               Cow position:chr19:21065509-21065888 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:393
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):88, 29

               
               
               Conread position:107-479
               
               
               Cow position:chr19:30886124-30886525 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:402
               
               
               Alignm identity:284
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):77, 0

               
               
               Conread position:107-506
               
               
               Cow position:chr19:36844979-36845405 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:429
               
               
               Alignm identity:314
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):94, 207

               
               
               Conread position:107-515
               
               
               Cow position:chr19:1664464-1664024 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:442
               
               
               Alignm identity:305
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):30, 195

               
               
               Conread position:107-526
               
               
               Cow position:chr19:53372165-53371724 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:444
               
               
               Alignm identity:315
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):27, 9

               
               
               Conread position:107-528
               
               
               Cow position:chr19:10213401-10213840 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:446
               
               
               Alignm identity:314
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):28, 193

               
               
               Conread position:107-528
               
               
               Cow position:chr19:39360870-39361325 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:460
               
               
               Alignm identity:319
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):24, 136

               
               
               Conread position:107-528
               
               
               Cow position:chr19:41023959-41024393 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:443
               
               
               Alignm identity:306
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):29, 189

               
               
               Conread position:107-528
               
               
               Cow position:chr19:41584704-41585144 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:447
               
               
               Alignm identity:307
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):29, 222

               
               
               Conread position:107-528
               
               
               Cow position:chr19:42694718-42695161 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:454
               
               
               Alignm identity:304
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):29, 345

               
               
               Conread position:107-528
               
               
               Cow position:chr19:47671482-47671906 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:445
               
               
               Alignm identity:305
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):90, 227

               
               
               Conread position:108-414
               
               
               Cow position:chr19:38638070-38637760 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:236
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):28, 190

               
               
               Conread position:108-521
               
               
               Cow position:chr19:10545977-10545541 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:443
               
               
               Alignm identity:302
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):28, 279

               
               
               Conread position:108-527
               
               
               Cow position:chr19:433395-432953 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:445
               
               
               Alignm identity:284
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):83, 48

               
               
               Conread position:108-528
               
               
               Cow position:chr19:3812284-3811850 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:450
               
               
               Alignm identity:298
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):28, 195

               
               
               Conread position:109-197
               
               
               Cow position:chr19:25902071-25902159 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:89
               
               
               Alignm identity:84
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:109-197
               
               
               Cow position:chr19:53800221-53800132 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:90
               
               
               Alignm identity:80
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:109-433
               
               
               Cow position:chr19:9099920-9100224 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:214
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):281, 27

               
               
               Conread position:109-435
               
               
               Cow position:chr19:990677-990335 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:347
               
               
               Alignm identity:239
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):43, 27

               
               
               Conread position:109-484
               
               
               Cow position:chr19:33882425-33882058 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:390
               
               
               Alignm identity:263
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):90, 27

               
               
               Conread position:109-528
               
               
               Cow position:chr19:14347742-14348198 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:461
               
               
               Alignm identity:319
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):27, 277

               
               
               Conread position:110-211
               
               
               Cow position:chr19:38601189-38601087 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:103
               
               
               Alignm identity:88
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:110-265
               
               
               Cow position:chr19:35076754-35076591 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:125
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):23, 86

               
               
               Conread position:110-309
               
               
               Cow position:chr19:10093028-10093247 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:165
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:110-524
               
               
               Cow position:chr19:23084613-23085026 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:420
               
               
               Alignm identity:280
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):23, 90

               
               
               Conread position:110-528
               
               
               Cow position:chr19:10186233-10186679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:452
               
               
               Alignm identity:310
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):26, 179

               
               
               Conread position:111-490
               
               
               Cow position:chr19:52381266-52381661 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:405
               
               
               Alignm identity:269
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):25, 59

               
               
               Conread position:111-528
               
               
               Cow position:chr19:5913216-5912785 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:437
               
               
               Alignm identity:316
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):20, 199

               
               
               Conread position:112-234
               
               
               Cow position:chr19:31381839-31381963 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:125
               
               
               Alignm identity:98
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:113-513
               
               
               Cow position:chr19:12748029-12747615 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:418
               
               
               Alignm identity:296
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):23, 80

               
               
               Conread position:114-497
               
               
               Cow position:chr19:21335875-21335452 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:293
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):61, 22

               
               
               Conread position:115-355
               
               
               Cow position:chr19:1898493-1898238 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:185
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):18, 32

               
               
               Conread position:117-455
               
               
               Cow position:chr19:51185166-51185524 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:361
               
               
               Alignm identity:252
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):17, 224

               
               
               Conread position:119-481
               
               
               Cow position:chr19:53243731-53243351 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:389
               
               
               Alignm identity:257
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):9, 37

               
               
               Conread position:119-528
               
               
               Cow position:chr19:21378724-21378294 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:313
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):14, 178

               
               
               Conread position:120-528
               
               
               Cow position:chr19:55589975-55590407 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:440
               
               
               Alignm identity:300
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):11, 90

               
               
               Conread position:121-528
               
               
               Cow position:chr19:3621172-3621601 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:437
               
               
               Alignm identity:311
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):14, 229

               
               
               Conread position:124-528
               
               
               Cow position:chr19:26976300-26975899 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:416
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):77, 163

               
               
               Conread position:126-309
               
               
               Cow position:chr19:53953895-53953707 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:146
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):7, 161

               
               
               Conread position:127-506
               
               
               Cow position:chr19:28554599-28554197 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:409
               
               
               Alignm identity:265
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):9, 148

               
               
               Conread position:129-528
               
               
               Cow position:chr19:43034995-43035415 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:425
               
               
               Alignm identity:283
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):26, 17

               
               
               Conread position:130-323
               
               
               Cow position:chr19:55544499-55544705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:148
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):69, 163

               
               
               Conread position:130-376
               
               
               Cow position:chr19:47187298-47187035 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):69, 168

               
               
               Conread position:130-455
               
               
               Cow position:chr19:10242367-10242679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:240
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):106, 32

               
               
               Conread position:130-528
               
               
               Cow position:chr19:11191869-11191449 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:430
               
               
               Alignm identity:293
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):14, 208

               
               
               Conread position:131-528
               
               
               Cow position:chr19:30471582-30471185 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:415
               
               
               Alignm identity:290
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):61, 158

               
               
               Conread position:136-528
               
               
               Cow position:chr19:6531651-6532046 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:415
               
               
               Alignm identity:293
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):63, 198

               
               
               Conread position:140-527
               
               
               Cow position:chr19:50025653-50026057 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:415
               
               
               Alignm identity:267
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):50, 11

               
               
               Conread position:142-402
               
               
               Cow position:chr19:35808353-35808100 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:186
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):57, 5

               
               
               Conread position:143-528
               
               
               Cow position:chr19:8209622-8209234 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:399
               
               
               Alignm identity:250
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):107, 56

               
               
               Conread position:148-528
               
               
               Cow position:chr19:8864520-8864915 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:281
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):5, 251

               
               
               Conread position:153-528
               
               
               Cow position:chr19:33903645-33903254 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:400
               
               
               Alignm identity:281
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):39, 145

               
               
               Conread position:155-528
               
               
               Cow position:chr19:55394700-55395080 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:392
               
               
               Alignm identity:264
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):29, 11

               
               
               Conread position:156-479
               
               
               Cow position:chr19:34000990-34001334 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:348
               
               
               Alignm identity:233
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):43, 14

               
               
               Conread position:159-449
               
               
               Cow position:chr19:42903802-42904105 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:208
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):51, 130

               
               
               Conread position:159-528
               
               
               Cow position:chr19:23784618-23784254 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:382
               
               
               Alignm identity:252
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):46, 126

               
               
               Conread position:161-528
               
               
               Cow position:chr19:22043558-22043185 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:384
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 11

               
               
               Conread position:169-523
               
               
               Cow position:chr19:54121084-54121432 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:363
               
               
               Alignm identity:230
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):44, 185

               
               
               Conread position:170-495
               
               
               Cow position:chr19:16105268-16104944 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:219
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):39, 65

               
               
               Conread position:172-528
               
               
               Cow position:chr19:52185948-52185585 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:371
               
               
               Alignm identity:244
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):114, 6

               
               
               Conread position:174-527
               
               
               Cow position:chr19:18316800-18317164 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:367
               
               
               Alignm identity:227
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):73, 64

               
               
               Conread position:176-459
               
               
               Cow position:chr19:7884392-7884684 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:208
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):18, 65

               
               
               Conread position:180-477
               
               
               Cow position:chr19:52214987-52215285 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:214
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):26, 19

               
               
               Conread position:182-376
               
               
               Cow position:chr19:46918667-46918870 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):54, 6

               
               
               Conread position:182-515
               
               
               Cow position:chr19:35846720-35847063 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:346
               
               
               Alignm identity:218
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):54, 7

               
               
               Conread position:183-475
               
               
               Cow position:chr19:25652936-25652637 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:207
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):18, 123

               
               
               Conread position:183-527
               
               
               Cow position:chr19:3216842-3217175 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:355
               
               
               Alignm identity:244
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):52, 14

               
               
               Conread position:184-524
               
               
               Cow position:chr19:34287847-34288181 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:236
               
               
               Alignm E-value:7e-40
               
               
               Alignm gaps (pig, cow):74, 54

               
               
               Conread position:184-528
               
               
               Cow position:chr19:41497808-41497470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:228
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):140, 52

               
               
               Conread position:190-505
               
               
               Cow position:chr19:2690369-2690052 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:216
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):45, 124

               
               
               Conread position:191-527
               
               
               Cow position:chr19:25526114-25526450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:346
               
               
               Alignm identity:248
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):45, 71

               
               
               Conread position:194-435
               
               
               Cow position:chr19:4329211-4328974 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):62, 44

               
               
               Conread position:194-460
               
               
               Cow position:chr19:20984937-20984666 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:184
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):49, 134

               
               
               Conread position:194-478
               
               
               Cow position:chr19:7404543-7404250 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:201
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):17, 116

               
               
               Conread position:194-478
               
               
               Cow position:chr19:22134313-22134026 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:205
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):33, 127

               
               
               Conread position:194-478
               
               
               Cow position:chr19:53840352-53840641 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:193
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):40, 119

               
               
               Conread position:194-513
               
               
               Cow position:chr19:24137094-24137427 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:232
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):44, 150

               
               
               Conread position:194-526
               
               
               Cow position:chr19:42563968-42564317 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:351
               
               
               Alignm identity:242
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):40, 295

               
               
               Conread position:194-526
               
               
               Cow position:chr19:53791594-53791263 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:343
               
               
               Alignm identity:229
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):40, 128

               
               
               Conread position:194-527
               
               
               Cow position:chr19:32506282-32505937 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:238
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):71, 44

               
               
               Conread position:194-527
               
               
               Cow position:chr19:38500000-38500327 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:343
               
               
               Alignm identity:226
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):54, 190

               
               
               Conread position:194-527
               
               
               Cow position:chr19:51285463-51285808 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:351
               
               
               Alignm identity:239
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):42, 313

               
               
               Conread position:194-528
               
               
               Cow position:chr19:16621520-16621186 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:347
               
               
               Alignm identity:231
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):42, 140

               
               
               Conread position:194-528
               
               
               Cow position:chr19:25382869-25382510 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:361
               
               
               Alignm identity:249
               
               
               Alignm E-value:7e-40
               
               
               Alignm gaps (pig, cow):41, 151

               
               
               Conread position:194-528
               
               
               Cow position:chr19:35762420-35762083 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:347
               
               
               Alignm identity:240
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):42, 226

               
               
               Conread position:195-484
               
               
               Cow position:chr19:33290319-33290612 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:212
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):41, 88

               
               
               Conread position:196-478
               
               
               Cow position:chr19:4800577-4800870 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:210
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):40, 22

               
               
               Conread position:197-459
               
               
               Cow position:chr19:11442823-11443097 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:190
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):86, 0

               
               
               Conread position:197-528
               
               
               Cow position:chr19:36138699-36139026 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:216
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):88, 36

               
               
               Conread position:198-472
               
               
               Cow position:chr19:12712040-12711756 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:190
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):36, 89

               
               
               Conread position:198-512
               
               
               Cow position:chr19:15719781-15719469 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:220
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):44, 18

               
               
               Conread position:198-527
               
               
               Cow position:chr19:21816798-21817137 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:257
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):38, 194

               
               
               Conread position:198-528
               
               
               Cow position:chr19:43685-44017 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:340
               
               
               Alignm identity:238
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):36, 152

               
               
               Conread position:198-528
               
               
               Cow position:chr19:24760048-24759715 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:343
               
               
               Alignm identity:240
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):41, 194

               
               
               Conread position:198-528
               
               
               Cow position:chr19:38111308-38111640 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:341
               
               
               Alignm identity:244
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):38, 125

               
               
               Conread position:198-528
               
               
               Cow position:chr19:48960230-48960565 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:342
               
               
               Alignm identity:242
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):14, 250

               
               
               Conread position:199-470
               
               
               Cow position:chr19:22799242-22798959 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:204
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):38, 103

               
               
               Conread position:199-475
               
               
               Cow position:chr19:25807465-25807185 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:203
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):37, 194

               
               
               Conread position:199-511
               
               
               Cow position:chr19:12709977-12709648 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:220
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):48, 0

               
               
               Conread position:199-525
               
               
               Cow position:chr19:22039608-22039942 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:340
               
               
               Alignm identity:219
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):48, 39

               
               
               Conread position:199-527
               
               
               Cow position:chr19:6601869-6601546 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:208
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):67, 39

               
               
               Conread position:199-528
               
               
               Cow position:chr19:36097060-36097396 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:342
               
               
               Alignm identity:231
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):36, 121

               
               
               Conread position:202-478
               
               
               Cow position:chr19:50682599-50682320 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:201
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):36, 64

               
               
               Conread position:202-528
               
               
               Cow position:chr19:750058-750362 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:222
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):83, 12

               
               
               Conread position:202-528
               
               
               Cow position:chr19:47453275-47453603 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:234
               
               
               Alignm E-value:8.99634e-43
               
               
               Alignm gaps (pig, cow):7, 79

               
               
               Conread position:203-526
               
               
               Cow position:chr19:31127525-31127181 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:224
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:203-528
               
               
               Cow position:chr19:46094798-46094455 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:239
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:204-477
               
               
               Cow position:chr19:39485161-39485439 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):35, 151

               
               
               Conread position:207-477
               
               
               Cow position:chr19:33237021-33237296 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:197
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):27, 115

               
               
               Conread position:211-528
               
               
               Cow position:chr19:15852797-15853098 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:229
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):29, 74

               
               
               Conread position:213-528
               
               
               Cow position:chr19:52158386-52158714 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:221
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):27, 71

               
               
               Conread position:217-528
               
               
               Cow position:chr19:15092272-15091973 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:214
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):100, 49

               
               
               Conread position:222-478
               
               
               Cow position:chr19:31690901-31691158 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:173
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):63, 11

               
               
               Conread position:222-495
               
               
               Cow position:chr19:41695799-41695522 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:190
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):72, 44

               
               
               Conread position:222-524
               
               
               Cow position:chr19:25855026-25854711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:213
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:222-526
               
               
               Cow position:chr19:53418495-53418812 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:205
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:222-528
               
               
               Cow position:chr19:8869446-8869747 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:214
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):102, 89

               
               
               Conread position:225-526
               
               
               Cow position:chr19:6278051-6278358 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:200
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:226-521
               
               
               Cow position:chr19:23371019-23371316 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:201
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):54, 7

               
               
               Conread position:226-521
               
               
               Cow position:chr19:25645766-25646062 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:202
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):58, 95

               
               
               Conread position:226-525
               
               
               Cow position:chr19:20666200-20665898 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:193
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):59, 19

               
               
               Conread position:226-526
               
               
               Cow position:chr19:53900275-53899969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):59, 244

               
               
               Conread position:228-528
               
               
               Cow position:chr19:21199008-21199322 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:220
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:228-528
               
               
               Cow position:chr19:28924630-28924932 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:210
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):55, 80

               
               
               Conread position:232-527
               
               
               Cow position:chr19:11110857-11110558 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:205
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):50, 80

               
               
               Conread position:232-528
               
               
               Cow position:chr19:23378562-23378849 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:214
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):53, 74

               
               
               Conread position:233-469
               
               
               Cow position:chr19:6849315-6849077 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:171
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):5, 84

               
               
               Conread position:233-477
               
               
               Cow position:chr19:43291928-43292178 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:185
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):50, 75

               
               
               Conread position:233-477
               
               
               Cow position:chr19:49457254-49457015 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:169
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):204, 46

               
               
               Conread position:233-478
               
               
               Cow position:chr19:43203112-43202865 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):44, 83

               
               
               Conread position:233-528
               
               
               Cow position:chr19:11438985-11439285 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:198
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):52, 34

               
               
               Conread position:234-457
               
               
               Cow position:chr19:22153973-22153745 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:165
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):90, 39

               
               
               Conread position:235-423
               
               
               Cow position:chr19:9408565-9408754 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:134
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):50, 13

               
               
               Conread position:235-466
               
               
               Cow position:chr19:42886837-42887062 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:170
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):85, 31

               
               
               Conread position:235-486
               
               
               Cow position:chr19:52196586-52196840 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:168
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):54, 77

               
               
               Conread position:235-499
               
               
               Cow position:chr19:39385154-39384897 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):48, 26

               
               
               Conread position:235-507
               
               
               Cow position:chr19:39254573-39254289 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:201
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):48, 0

               
               
               Conread position:235-521
               
               
               Cow position:chr19:1650387-1650671 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):50, 73

               
               
               Conread position:235-523
               
               
               Cow position:chr19:51751291-51750999 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:207
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):49, 15

               
               
               Conread position:235-525
               
               
               Cow position:chr19:22992511-22992220 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:195
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):50, 26

               
               
               Conread position:235-527
               
               
               Cow position:chr19:2221200-2220901 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:222
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:235-527
               
               
               Cow position:chr19:7158843-7158544 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:199
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):42, 89

               
               
               Conread position:235-527
               
               
               Cow position:chr19:53776693-53776398 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:190
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):50, 13

               
               
               Conread position:235-528
               
               
               Cow position:chr19:13121395-13121114 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:217
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):83, 52

               
               
               Conread position:235-528
               
               
               Cow position:chr19:22450052-22449745 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:208
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:235-528
               
               
               Cow position:chr19:34166249-34166540 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:223
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):48, 37

               
               
               Conread position:236-481
               
               
               Cow position:chr19:6516146-6516390 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:172
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):47, 117

               
               
               Conread position:236-496
               
               
               Cow position:chr19:25397573-25397842 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:178
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):55, 0

               
               
               Conread position:236-524
               
               
               Cow position:chr19:7741726-7741433 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:198
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):16, 44

               
               
               Conread position:236-528
               
               
               Cow position:chr19:10971215-10970936 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:200
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):47, 34

               
               
               Conread position:236-528
               
               
               Cow position:chr19:25570484-25570764 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:203
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):86, 36

               
               
               Conread position:237-509
               
               
               Cow position:chr19:25673639-25673371 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:201
               
               
               Alignm E-value:8.99634e-43
               
               
               Alignm gaps (pig, cow):48, 57

               
               
               Conread position:237-517
               
               
               Cow position:chr19:8599435-8599150 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:184
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):47, 154

               
               
               Conread position:237-523
               
               
               Cow position:chr19:5496867-5497161 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:192
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):48, 265

               
               
               Conread position:237-527
               
               
               Cow position:chr19:55160673-55160961 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):48, 36

               
               
               Conread position:237-528
               
               
               Cow position:chr19:1791830-1791522 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:209
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):50, 0

               
               
               Conread position:237-528
               
               
               Cow position:chr19:14632155-14631869 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:200
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):48, 69

               
               
               Conread position:237-528
               
               
               Cow position:chr19:51621303-51621005 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:201
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):46, 71

               
               
               Conread position:238-527
               
               
               Cow position:chr19:10929322-10929617 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):47, 170

               
               
               Conread position:238-528
               
               
               Cow position:chr19:23394667-23394957 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:205
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):47, 23

               
               
               Conread position:238-528
               
               
               Cow position:chr19:24005548-24005825 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:198
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):194, 44

               
               
               Conread position:239-526
               
               
               Cow position:chr19:24453627-24453338 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:197
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):48, 66

               
               
               Conread position:239-528
               
               
               Cow position:chr19:39801760-39802070 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:312
               
               
               Alignm identity:217
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):44, 139

               
               
               Conread position:239-528
               
               
               Cow position:chr19:43189810-43190101 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:213
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):44, 32

               
               
               Conread position:239-528
               
               
               Cow position:chr19:51352094-51351818 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):44, 86

               
               
               Conread position:240-497
               
               
               Cow position:chr19:34819306-34819044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):49, 21

               
               
               Conread position:240-512
               
               
               Cow position:chr19:26753922-26754197 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:199
               
               
               Alignm E-value:8.99634e-43
               
               
               Alignm gaps (pig, cow):178, 39

               
               
               Conread position:241-499
               
               
               Cow position:chr19:47986740-47987000 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:187
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):43, 221

               
               
               Conread position:242-527
               
               
               Cow position:chr19:31652446-31652732 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:201
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):43, 64

               
               
               Conread position:243-528
               
               
               Cow position:chr19:42517371-42517082 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:196
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):49, 220

               
               
               Conread position:243-528
               
               
               Cow position:chr19:52750873-52750587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:202
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):40, 244

               
               
               Conread position:243-528
               
               
               Cow position:chr19:53190326-53190612 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:185
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):7, 38

               
               
               Conread position:245-484
               
               
               Cow position:chr19:39649186-39648941 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:176
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):38, 11

               
               
               Conread position:245-515
               
               
               Cow position:chr19:18826673-18826401 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:183
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):40, 65

               
               
               Conread position:248-528
               
               
               Cow position:chr19:35870685-35870959 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:195
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):32, 127

               
               
               Conread position:257-522
               
               
               Cow position:chr19:55247538-55247795 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:187
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):180, 48

               
               
               Conread position:257-528
               
               
               Cow position:chr19:19549648-19549383 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:186
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):28, 154

               
               
               Conread position:257-528
               
               
               Cow position:chr19:43413680-43413951 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:202
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):53, 22

               
               
               Conread position:260-525
               
               
               Cow position:chr19:33758347-33758075 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:179
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):25, 95

               
               
               Conread position:262-528
               
               
               Cow position:chr19:3498047-3497775 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:185
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):23, 12

               
               
               Conread position:263-526
               
               
               Cow position:chr19:31811235-31810967 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:173
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):20, 199

               
               
               Conread position:263-528
               
               
               Cow position:chr19:38410775-38411041 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:191
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):22, 58

               
               
               Conread position:265-526
               
               
               Cow position:chr19:17776090-17776348 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:174
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):20, 40

               
               
               Conread position:267-528
               
               
               Cow position:chr19:11646482-11646736 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:184
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):18, 53

               
               
               Conread position:267-528
               
               
               Cow position:chr19:33575433-33575691 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:180
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):18, 77

               
               
               Conread position:278-528
               
               
               Cow position:chr19:10238657-10238908 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:171
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):45, 73

               
               
               Conread position:280-527
               
               
               Cow position:chr19:30227445-30227694 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:189
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):155, 67

               
               
               Conread position:281-528
               
               
               Cow position:chr19:13933363-13933617 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:169
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):79, 39

               
               
               Conread position:282-460
               
               
               Cow position:chr19:43647339-43647524 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:134
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):129, 0

               
               
               Conread position:282-478
               
               
               Cow position:chr19:54915766-54915567 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:145
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):155, 0

               
               
               Conread position:282-506
               
               
               Cow position:chr19:30910069-30910288 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:155
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):38, 155

               
               
               Conread position:282-524
               
               
               Cow position:chr19:4987840-4987598 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:164
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):32, 94

               
               
               Conread position:282-527
               
               
               Cow position:chr19:11194837-11194593 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:171
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):19, 40

               
               
               Conread position:282-528
               
               
               Cow position:chr19:6309991-6309750 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:171
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):31, 173

               
               
               Conread position:282-528
               
               
               Cow position:chr19:13488579-13488334 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):35, 183

               
               
               Conread position:282-528
               
               
               Cow position:chr19:18505240-18504994 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:169
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):155, 11

               
               
               Conread position:282-528
               
               
               Cow position:chr19:25410917-25410682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:169
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):41, 11

               
               
               Conread position:282-528
               
               
               Cow position:chr19:28447366-28447612 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:177
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):38, 100

               
               
               Conread position:282-528
               
               
               Cow position:chr19:37467133-37466889 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:174
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):152, 37

               
               
               Conread position:283-473
               
               
               Cow position:chr19:39781444-39781640 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:136
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:283-506
               
               
               Cow position:chr19:39758448-39758675 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:164
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):37, 123

               
               
               Conread position:283-528
               
               
               Cow position:chr19:43372971-43373220 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:178
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):154, 32

               
               
               Conread position:284-528
               
               
               Cow position:chr19:39583869-39584120 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:170
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):26, 67

               
               
               Conread position:284-528
               
               
               Cow position:chr19:47185154-47184908 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:180
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):40, 65

               
               
               Conread position:285-527
               
               
               Cow position:chr19:4459512-4459271 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):38, 19

               
               
               Conread position:288-520
               
               
               Cow position:chr19:32031314-32031076 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:156
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):30, 0

               
               
               Conread position:288-528
               
               
               Cow position:chr19:6344001-6344254 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):30, 130

               
               
               Conread position:295-528
               
               
               Cow position:chr19:23087924-23088153 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:172
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):137, 5

               
               
               Conread position:296-528
               
               
               Cow position:chr19:17354797-17355031 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:166
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:298-528
               
               
               Cow position:chr19:28810377-28810144 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:165
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):13, 182

               
               
               Conread position:301-528
               
               
               Cow position:chr19:30007136-30007357 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:169
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):21, 123

               
               
               Conread position:303-528
               
               
               Cow position:chr19:32437950-32437732 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:150
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):123, 0

               
               
               Conread position:306-528
               
               
               Cow position:chr19:19460391-19460608 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:156
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):112, 130

               
               
               Conread position:308-528
               
               
               Cow position:chr19:6854326-6854114 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:157
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):200, 16

               
               
               Conread position:308-528
               
               
               Cow position:chr19:6854863-6855089 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:163
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):20, 89

               
               
               Conread position:310-499
               
               
               Cow position:chr19:15362747-15362554 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:144
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):12, 156

               
               
               Conread position:310-528
               
               
               Cow position:chr19:33988022-33988241 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):59, 93

               
               
               Conread position:311-528
               
               
               Cow position:chr19:26167957-26167743 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:151
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):129, 158

               
               
               Conread position:312-478
               
               
               Cow position:chr19:12705882-12705714 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:125
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):120, 139

               
               
               Conread position:316-525
               
               
               Cow position:chr19:26269273-26269056 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:159
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):30, 19

               
               
               Conread position:320-528
               
               
               Cow position:chr19:27966182-27965973 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:153
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):117, 49

               
               
               Conread position:321-466
               
               
               Cow position:chr19:13325520-13325372 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:110
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):116, 0

               
               
               Conread position:321-517
               
               
               Cow position:chr19:10930451-10930262 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:144
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):108, 50

               
               
               Conread position:321-525
               
               
               Cow position:chr19:40323784-40323991 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):116, 0

               
               
               Conread position:321-527
               
               
               Cow position:chr19:4297652-4297856 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:143
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):116, 0

               
               
               Conread position:321-527
               
               
               Cow position:chr19:7674229-7674438 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:144
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):41, 24

               
               
               Conread position:321-528
               
               
               Cow position:chr19:2068232-2068436 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:156
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):111, 141

               
               
               Conread position:321-528
               
               
               Cow position:chr19:11560076-11559863 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:154
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):16, 27

               
               
               Conread position:321-528
               
               
               Cow position:chr19:18054291-18054087 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:146
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):111, 143

               
               
               Conread position:321-528
               
               
               Cow position:chr19:21176776-21176574 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:147
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):116, 137

               
               
               Conread position:321-528
               
               
               Cow position:chr19:23756777-23756579 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:154
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):106, 139

               
               
               Conread position:321-528
               
               
               Cow position:chr19:23889522-23889314 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:149
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):114, 139

               
               
               Conread position:321-528
               
               
               Cow position:chr19:33913492-33913702 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:156
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):113, 0

               
               
               Conread position:321-528
               
               
               Cow position:chr19:34420380-34420581 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):113, 24

               
               
               Conread position:321-528
               
               
               Cow position:chr19:34608232-34608027 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:148
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):116, 58

               
               
               Conread position:321-528
               
               
               Cow position:chr19:34758037-34757820 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:166
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):111, 0

               
               
               Conread position:321-528
               
               
               Cow position:chr19:38732104-38732310 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:159
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):18, 28

               
               
               Conread position:322-472
               
               
               Cow position:chr19:42235994-42236147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:115
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:322-477
               
               
               Cow position:chr19:7675200-7675361 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:119
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:322-526
               
               
               Cow position:chr19:21836272-21836066 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:137
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):117, 0

               
               
               Conread position:322-528
               
               
               Cow position:chr19:49221655-49221450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:154
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):110, 143

               
               
               Conread position:323-528
               
               
               Cow position:chr19:25763081-25763277 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):109, 56

               
               
               Conread position:323-528
               
               
               Cow position:chr19:39795157-39795361 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:153
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):114, 132

               
               
               Conread position:324-528
               
               
               Cow position:chr19:10538583-10538386 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):110, 0

               
               
               Conread position:327-526
               
               
               Cow position:chr19:7148092-7147886 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:149
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):101, 0

               
               
               Conread position:327-528
               
               
               Cow position:chr19:37067111-37067305 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:139
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):107, 0

               
               
               Conread position:329-528
               
               
               Cow position:chr19:23831324-23831521 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:151
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):108, 41

               
               
               Conread position:329-528
               
               
               Cow position:chr19:38021417-38021614 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):108, 84

               
               
               Conread position:330-528
               
               
               Cow position:chr19:35920826-35921023 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):152, 0

               
               
               Conread position:331-528
               
               
               Cow position:chr19:37109627-37109436 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:149
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):10, 46

               
               
               Conread position:332-527
               
               
               Cow position:chr19:35245918-35246116 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):105, 0

               
               
               Conread position:332-528
               
               
               Cow position:chr19:8185179-8185377 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):105, 132

               
               
               Conread position:332-528
               
               
               Cow position:chr19:52728589-52728783 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:145
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):102, 15

               
               
               Conread position:333-528
               
               
               Cow position:chr19:25927433-25927238 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:148
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):11, 129

               
               
               Conread position:335-526
               
               
               Cow position:chr19:20437245-20437437 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:133
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):102, 29

               
               
               Conread position:335-528
               
               
               Cow position:chr19:24692987-24693176 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:144
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):99, 137

               
               
               Conread position:336-528
               
               
               Cow position:chr19:9391170-9390970 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:143
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):101, 11

               
               
               Conread position:339-528
               
               
               Cow position:chr19:39981719-39981911 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:141
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):10, 75

               
               
               Conread position:340-527
               
               
               Cow position:chr19:12093343-12093533 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:142
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):118, 72

               
               
               Conread position:340-528
               
               
               Cow position:chr19:31763475-31763668 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):72, 164

               
               
               Conread position:341-523
               
               
               Cow position:chr19:10574284-10574099 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:130
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:342-528
               
               
               Cow position:chr19:40650770-40650957 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:144
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):32, 8

               
               
               Conread position:344-527
               
               
               Cow position:chr19:18515673-18515858 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):93, 73

               
               
               Conread position:347-475
               
               
               Cow position:chr19:31998282-31998151 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:132
               
               
               Alignm identity:102
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:347-489
               
               
               Cow position:chr19:1897961-1897815 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:109
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:347-495
               
               
               Cow position:chr19:52568484-52568330 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:122
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):90, 116

               
               
               Conread position:347-526
               
               
               Cow position:chr19:20379041-20378864 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):90, 120

               
               
               Conread position:347-528
               
               
               Cow position:chr19:11816732-11816551 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:130
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):90, 107

               
               
               Conread position:347-528
               
               
               Cow position:chr19:39586115-39585932 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:135
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):90, 30

               
               
               Conread position:347-528
               
               
               Cow position:chr19:52356243-52356424 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):90, 111

               
               
               Conread position:348-472
               
               
               Cow position:chr19:38630903-38630776 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:128
               
               
               Alignm identity:98
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:348-528
               
               
               Cow position:chr19:4339649-4339458 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:348-528
               
               
               Cow position:chr19:5522163-5521986 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:139
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):88, 119

               
               
               Conread position:348-528
               
               
               Cow position:chr19:7595153-7594984 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):89, 25

               
               
               Conread position:349-528
               
               
               Cow position:chr19:14581356-14581532 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):88, 39

               
               
               Conread position:349-528
               
               
               Cow position:chr19:15076207-15076019 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:137
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:349-528
               
               
               Cow position:chr19:51294290-51294113 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):88, 28

               
               
               Conread position:350-528
               
               
               Cow position:chr19:11211284-11211103 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:129
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:350-528
               
               
               Cow position:chr19:31729257-31729438 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:127
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:350-528
               
               
               Cow position:chr19:40127172-40126993 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):82, 120

               
               
               Conread position:351-515
               
               
               Cow position:chr19:36978262-36978430 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:126
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:351-527
               
               
               Cow position:chr19:12945311-12945133 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:128
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):81, 145

               
               
               Conread position:351-528
               
               
               Cow position:chr19:42776426-42776606 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:139
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):11, 55

               
               
               Conread position:353-528
               
               
               Cow position:chr19:12761106-12760928 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:130
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:354-528
               
               
               Cow position:chr19:4586549-4586377 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:133
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):83, 100

               
               
               Conread position:354-528
               
               
               Cow position:chr19:35444509-35444332 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:129
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):83, 0

               
               
               Conread position:354-528
               
               
               Cow position:chr19:41946714-41946893 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:131
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):59, 114

               
               
               Conread position:356-528
               
               
               Cow position:chr19:33609893-33610062 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:133
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):81, 19

               
               
               Conread position:357-525
               
               
               Cow position:chr19:2137824-2137659 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:128
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):80, 89

               
               
               Conread position:357-527
               
               
               Cow position:chr19:5261334-5261511 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:129
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):67, 0

               
               
               Conread position:358-528
               
               
               Cow position:chr19:1900727-1900554 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):79, 37

               
               
               Conread position:358-528
               
               
               Cow position:chr19:4486150-4485976 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:126
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):23, 148

               
               
               Conread position:361-528
               
               
               Cow position:chr19:41089615-41089444 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:123
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):76, 0

               
               
               Conread position:362-528
               
               
               Cow position:chr19:28918415-28918582 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:128
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):9, 110

               
               
               Conread position:363-523
               
               
               Cow position:chr19:41718957-41718795 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:116
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:363-528
               
               
               Cow position:chr19:7558553-7558718 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:126
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):74, 9

               
               
               Conread position:363-528
               
               
               Cow position:chr19:39698293-39698459 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:128
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):74, 91

               
               
               Conread position:364-528
               
               
               Cow position:chr19:53189847-53189678 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:124
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:365-527
               
               
               Cow position:chr19:29139211-29139376 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:122
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:365-528
               
               
               Cow position:chr19:19738009-19738175 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:123
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:365-528
               
               
               Cow position:chr19:47363674-47363840 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:125
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):72, 150

               
               
               Conread position:366-528
               
               
               Cow position:chr19:11172833-11172999 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):18, 157

               
               
               Conread position:370-528
               
               
               Cow position:chr19:18984161-18984327 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:122
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:370-528
               
               
               Cow position:chr19:38597084-38597239 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:123
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):67, 96

               
               
               Conread position:370-528
               
               
               Cow position:chr19:41187853-41188008 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:120
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):66, 94

               
               
               Conread position:370-528
               
               
               Cow position:chr19:46822723-46822881 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:120
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):65, 54

               
               
               Conread position:371-528
               
               
               Cow position:chr19:49290442-49290286 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:119
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):66, 97

               
               
               Conread position:372-499
               
               
               Cow position:chr19:4537247-4537118 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:131
               
               
               Alignm identity:100
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):65, 5

               
               
               Conread position:372-528
               
               
               Cow position:chr19:7794669-7794822 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:116
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):63, 0

               
               
               Conread position:379-509
               
               
               Cow position:chr19:14588428-14588561 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:134
               
               
               Alignm identity:106
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):58, 0

               
               
               Conread position:380-517
               
               
               Cow position:chr19:31768606-31768468 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:107
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):54, 79

               
               
               Conread position:380-528
               
               
               Cow position:chr19:22871231-22871084 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:118
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):54, 88

               
               
               Conread position:380-528
               
               
               Cow position:chr19:24068259-24068109 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:117
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):57, 8

               
               
               Conread position:380-528
               
               
               Cow position:chr19:24224363-24224506 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:115
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):57, 85

               
               
               Conread position:380-528
               
               
               Cow position:chr19:27968672-27968522 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:118
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):54, 113

               
               
               Conread position:380-528
               
               
               Cow position:chr19:30917920-30917770 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:113
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):57, 104

               
               
               Conread position:381-488
               
               
               Cow position:chr19:43985770-43985660 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:111
               
               
               Alignm identity:89
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:381-528
               
               
               Cow position:chr19:18051140-18050990 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:116
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):9, 97

               
               
               Conread position:381-528
               
               
               Cow position:chr19:22414241-22414095 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:112
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):56, 84

               
               
               Conread position:381-528
               
               
               Cow position:chr19:35073028-35072879 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:116
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):56, 84

               
               
               Conread position:381-528
               
               
               Cow position:chr19:42868040-42868190 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:113
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:381-528
               
               
               Cow position:chr19:51637065-51637217 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:117
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:382-527
               
               
               Cow position:chr19:17203379-17203529 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:112
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):53, 0

               
               
               Conread position:384-499
               
               
               Cow position:chr19:45923233-45923351 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:119
               
               
               Alignm identity:93
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):53, 0

               
               
               Conread position:388-527
               
               
               Cow position:chr19:23416851-23416709 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:113
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:393-528
               
               
               Cow position:chr19:8603372-8603513 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:107
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:394-528
               
               
               Cow position:chr19:42217278-42217140 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:112
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):43, 92

               
               
               Conread position:395-528
               
               
               Cow position:chr19:43292372-43292505 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:134
               
               
               Alignm identity:100
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:396-528
               
               
               Cow position:chr19:54105493-54105628 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:107
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:419-527
               
               
               Cow position:chr19:4328812-4328702 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:112
               
               
               Alignm identity:91
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):18, 71
Show alignments to all cow chromosomes.