Cow genome map

Conread name: Ss1.1-rmgp028_b8.5

Conread position: 1-95
Cow position: chr21:3047362-3047456 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr21:32008-32106 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-106
Cow position: chr21:4541175-4541067 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 104

Conread position: 1-106
Cow position: chr21:12802083-12801978 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 82, 101

Conread position: 1-107
Cow position: chr21:8451543-8451649 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-109
Cow position: chr21:8617935-8618045 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 96
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 1-115
Cow position: chr21:33155022-33155137 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 1-118
Cow position: chr21:27521695-27521579 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 1-119
Cow position: chr21:14452524-14452643 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 1-119
Cow position: chr21:14742948-14743067 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 1-119
Cow position: chr21:17196810-17196692 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-119
Cow position: chr21:26557359-26557241 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 100, 12

Conread position: 1-119
Cow position: chr21:44761658-44761539 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 1-126
Cow position: chr21:14238252-14238378 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 1-129
Cow position: chr21:14125760-14125890 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 1-130
Cow position: chr21:3467966-3468102 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 1-134
Cow position: chr21:16278409-16278543 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 114
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 100, 0

Conread position: 1-139
Cow position: chr21:36116033-36116168 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 53

Conread position: 1-145
Cow position: chr21:7666358-7666214 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 100, 139

Conread position: 1-150
Cow position: chr21:29999883-29999733 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 100, 0

Conread position: 1-152
Cow position: chr21:19237416-19237567 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 127
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 100, 124

Conread position: 1-175
Cow position: chr21:44658016-44658191 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 100, 140

Conread position: 1-176
Cow position: chr21:2984093-2983915 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 1-180
Cow position: chr21:27712738-27712553 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 153
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 99, 0

Conread position: 1-182
Cow position: chr21:13735134-13734951 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 100, 0

Conread position: 1-185
Cow position: chr21:45743-45929 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 166

Conread position: 1-185
Cow position: chr21:2657289-2657472 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 153
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 100, 87

Conread position: 1-185
Cow position: chr21:9980990-9980817 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 130, 40

Conread position: 1-193
Cow position: chr21:6623846-6624034 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 82, 0

Conread position: 1-194
Cow position: chr21:3920514-3920318 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 100, 0

Conread position: 1-194
Cow position: chr21:43352207-43352013 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 9

Conread position: 1-195
Cow position: chr21:8289941-8289747 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 100, 56

Conread position: 1-195
Cow position: chr21:10624174-10623978 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 1-195
Cow position: chr21:21170244-21170048 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 100, 0

Conread position: 1-195
Cow position: chr21:23449279-23449468 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 35

Conread position: 1-195
Cow position: chr21:26681240-26681054 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 130, 95

Conread position: 1-195
Cow position: chr21:28914665-28914472 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 100, 156

Conread position: 1-195
Cow position: chr21:32191869-32192064 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 157
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 101, 58

Conread position: 1-195
Cow position: chr21:34685048-34685244 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 100, 0

Conread position: 1-195
Cow position: chr21:37924211-37924411 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 100, 0

Conread position: 1-195
Cow position: chr21:40265531-40265727 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-195
Cow position: chr21:45372053-45372249 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 100, 0

Conread position: 1-196
Cow position: chr21:2709862-2709665 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 100, 0

Conread position: 1-196
Cow position: chr21:17616618-17616430 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 130, 87

Conread position: 1-196
Cow position: chr21:23984586-23984389 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:150174-150372 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:393719-393917 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 102, 0

Conread position: 1-197
Cow position: chr21:451902-452100 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:750436-750634 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:1196565-1196763 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:1781051-1781247 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 100, 48

Conread position: 1-197
Cow position: chr21:1815262-1815065 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 103, 26

Conread position: 1-197
Cow position: chr21:2495473-2495278 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 100, 86

Conread position: 1-197
Cow position: chr21:2877814-2877616 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 100, 178

Conread position: 1-197
Cow position: chr21:3782798-3782996 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:3987788-3987590 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:4279332-4279528 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 47

Conread position: 1-197
Cow position: chr21:4905269-4905077 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 159
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 99, 124

Conread position: 1-197
Cow position: chr21:5009479-5009278 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:5021166-5021364 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:5392840-5392647 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 88, 0

Conread position: 1-197
Cow position: chr21:5840870-5841068 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:5857438-5857241 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:7564624-7564427 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 153

Conread position: 1-197
Cow position: chr21:7815012-7814815 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 100, 40

Conread position: 1-197
Cow position: chr21:16789419-16789617 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:17144846-17145044 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:18718367-18718564 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 100, 88

Conread position: 1-197
Cow position: chr21:19439162-19439359 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 100, 20

Conread position: 1-197
Cow position: chr21:21103746-21103945 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:21785389-21785191 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 101, 0

Conread position: 1-197
Cow position: chr21:22856877-22857073 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 100, 63

Conread position: 1-197
Cow position: chr21:23900109-23899911 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:24136616-24136813 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 100, 119

Conread position: 1-197
Cow position: chr21:24864853-24865052 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:25158591-25158786 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 100

Conread position: 1-197
Cow position: chr21:25193493-25193690 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 100, 166

Conread position: 1-197
Cow position: chr21:26756697-26756500 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:26835597-26835399 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:27376147-27376344 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 100, 190

Conread position: 1-197
Cow position: chr21:28993928-28993730 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:29954918-29955116 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:30595053-30594857 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 100, 53

Conread position: 1-197
Cow position: chr21:30626485-30626290 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 158
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 99, 121

Conread position: 1-197
Cow position: chr21:31039654-31039456 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:31158953-31159152 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 59

Conread position: 1-197
Cow position: chr21:31948590-31948788 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:31950441-31950639 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:33933686-33933488 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:34251835-34251638 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:34909889-34910087 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:35068060-35068258 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:36225445-36225643 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 100, 0

Conread position: 1-197
Cow position: chr21:36505538-36505341 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 100, 29

Conread position: 1-197
Cow position: chr21:36781153-36781346 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 100, 88

Conread position: 1-197
Cow position: chr21:37122355-37122155 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 101, 0

Conread position: 1-197
Cow position: chr21:37297614-37297427 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 100, 70

Conread position: 1-197
Cow position: chr21:39061546-39061745 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 1-197
Cow position: chr21:39700378-39700180 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 100, 177

Conread position: 1-197
Cow position: chr21:40786369-40786566 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 54

Conread position: 1-197
Cow position: chr21:41032979-41033177 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 56, 138

Conread position: 1-197
Cow position: chr21:43402292-43402098 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 101, 70

Conread position: 1-197
Cow position: chr21:47429368-47429565 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 100, 81

Conread position: 1-197
Cow position: chr21:47767685-47767487 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 100, 0

Conread position: 1-199
Cow position: chr21:4035294-4035095 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 100, 12

Conread position: 1-199
Cow position: chr21:7717089-7716893 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 14

Conread position: 1-199
Cow position: chr21:13111099-13110899 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 97, 0

Conread position: 1-199
Cow position: chr21:19668694-19668497 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 101, 57

Conread position: 1-199
Cow position: chr21:22349841-22350045 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 57

Conread position: 1-199
Cow position: chr21:24607081-24607283 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 1-199
Cow position: chr21:27065430-27065232 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 134, 100

Conread position: 1-199
Cow position: chr21:29500604-29500804 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 101, 0

Conread position: 1-199
Cow position: chr21:31436044-31436245 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 85, 0

Conread position: 1-199
Cow position: chr21:40530604-40530408 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 100, 87

Conread position: 1-199
Cow position: chr21:44281135-44280933 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 0

Conread position: 1-199
Cow position: chr21:45263323-45263124 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 48

Conread position: 1-200
Cow position: chr21:6697395-6697196 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 169

Conread position: 1-200
Cow position: chr21:9209334-9209535 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 100, 0

Conread position: 1-200
Cow position: chr21:11195829-11196031 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 100, 191

Conread position: 1-200
Cow position: chr21:32447240-32447441 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 100, 0

Conread position: 1-200
Cow position: chr21:36909519-36909725 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 64

Conread position: 1-202
Cow position: chr21:6765004-6764804 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 100, 152

Conread position: 1-208
Cow position: chr21:20549219-20549005 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 98, 9

Conread position: 1-214
Cow position: chr21:32894472-32894259 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 67

Conread position: 1-224
Cow position: chr21:3635032-3634803 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 41, 106

Conread position: 1-233
Cow position: chr21:45250581-45250342 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 180

Conread position: 1-246
Cow position: chr21:1510792-1511027 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 193
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 130, 50

Conread position: 1-249
Cow position: chr21:19614271-19614521 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 100, 200

Conread position: 1-259
Cow position: chr21:18979157-18978875 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 101, 56

Conread position: 1-259
Cow position: chr21:19626682-19626425 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 100, 201

Conread position: 1-267
Cow position: chr21:12973553-12973275 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 9, 60

Conread position: 1-289
Cow position: chr21:363353-363658 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 100, 200

Conread position: 1-293
Cow position: chr21:33420018-33419711 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 174

Conread position: 1-305
Cow position: chr21:26829537-26829234 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 86

Conread position: 1-313
Cow position: chr21:48484742-48484415 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 134

Conread position: 1-325
Cow position: chr21:4585651-4585322 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 182, 121

Conread position: 1-329
Cow position: chr21:42190460-42190127 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 48

Conread position: 1-336
Cow position: chr21:12616840-12617195 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 130, 93

Conread position: 1-358
Cow position: chr21:27743439-27743826 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 167

Conread position: 1-359
Cow position: chr21:28617300-28617669 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 263
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 194, 87

Conread position: 1-364
Cow position: chr21:35823191-35822808 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 259
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 100, 9

Conread position: 1-365
Cow position: chr21:8985247-8985636 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 279

Conread position: 1-371
Cow position: chr21:5455288-5454901 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 139

Conread position: 1-376
Cow position: chr21:5344359-5344761 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 135

Conread position: 1-376
Cow position: chr21:13300850-13301219 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 190

Conread position: 1-376
Cow position: chr21:32535677-32536072 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 27

Conread position: 1-386
Cow position: chr21:4794919-4795331 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 373

Conread position: 1-398
Cow position: chr21:24222843-24222420 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 88

Conread position: 1-402
Cow position: chr21:36163265-36162838 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 323

Conread position: 1-404
Cow position: chr21:5649604-5650026 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 153

Conread position: 1-405
Cow position: chr21:2367039-2367456 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 12

Conread position: 1-408
Cow position: chr21:24130784-24131196 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 48

Conread position: 1-408
Cow position: chr21:37874216-37874616 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 270
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 98, 256

Conread position: 1-411
Cow position: chr21:28512239-28512644 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 70

Conread position: 1-420
Cow position: chr21:24796336-24795889 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 309
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 100, 77

Conread position: 1-430
Cow position: chr21:34391268-34390826 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 58

Conread position: 1-431
Cow position: chr21:18850528-18850074 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 1-431
Cow position: chr21:35897923-35897476 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 90

Conread position: 1-432
Cow position: chr21:45916006-45915567 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 153

Conread position: 1-432
Cow position: chr21:47823569-47823118 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 300
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 194, 90

Conread position: 1-433
Cow position: chr21:48291332-48290906 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 295
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 98, 102

Conread position: 1-434
Cow position: chr21:24698180-24698633 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 300
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 97, 297

Conread position: 1-435
Cow position: chr21:167947-167513 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 283

Conread position: 1-435
Cow position: chr21:4998787-4998341 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 136

Conread position: 1-435
Cow position: chr21:10045934-10046375 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 278
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 100, 228

Conread position: 1-435
Cow position: chr21:10571298-10571752 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 293
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 100, 268

Conread position: 1-435
Cow position: chr21:11228256-11227807 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 309

Conread position: 1-435
Cow position: chr21:13070162-13069706 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 297
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 100, 57

Conread position: 1-435
Cow position: chr21:20045069-20044610 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 86

Conread position: 1-435
Cow position: chr21:30904903-30904466 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 283
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 100, 87

Conread position: 1-435
Cow position: chr21:34658734-34659162 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 37

Conread position: 1-435
Cow position: chr21:40267130-40266677 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 303
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 100, 252

Conread position: 1-435
Cow position: chr21:42558802-42559246 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 291
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 100, 197

Conread position: 1-437
Cow position: chr21:23500123-23499672 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 299
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 101, 136

Conread position: 1-454
Cow position: chr21:30990570-30990111 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 290

Conread position: 1-455
Cow position: chr21:27341892-27341418 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 73

Conread position: 1-458
Cow position: chr21:44671451-44671924 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 200

Conread position: 1-462
Cow position: chr21:5153315-5153804 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 1-468
Cow position: chr21:15976339-15976822 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 83

Conread position: 1-470
Cow position: chr21:28989316-28989804 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 341
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 33, 108

Conread position: 1-473
Cow position: chr21:4399498-4399996 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 365

Conread position: 1-473
Cow position: chr21:28923841-28924305 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 26

Conread position: 1-474
Cow position: chr21:10514510-10514995 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 95

Conread position: 1-475
Cow position: chr21:2420203-2420695 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 110

Conread position: 1-475
Cow position: chr21:7582207-7581708 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 116

Conread position: 1-478
Cow position: chr21:13163614-13164059 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 31

Conread position: 1-478
Cow position: chr21:16696068-16696573 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 153

Conread position: 1-478
Cow position: chr21:42384206-42384709 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 88

Conread position: 1-484
Cow position: chr21:4098580-4099075 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 9

Conread position: 1-489
Cow position: chr21:19766552-19767065 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 303

Conread position: 1-507
Cow position: chr21:31691179-31691699 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 100

Conread position: 1-516
Cow position: chr21:643035-643558 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 121

Conread position: 1-517
Cow position: chr21:39664673-39664159 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 34

Conread position: 1-519
Cow position: chr21:19614875-19615410 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 55

Conread position: 1-524
Cow position: chr21:31702258-31701702 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 325

Conread position: 1-525
Cow position: chr21:937750-938265 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 87

Conread position: 1-525
Cow position: chr21:46777275-46776753 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 180

Conread position: 1-527
Cow position: chr21:641285-641830 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 19

Conread position: 1-527
Cow position: chr21:13048498-13047944 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 112

Conread position: 1-527
Cow position: chr21:29214457-29213912 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 89

Conread position: 1-527
Cow position: chr21:41974681-41974121 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 230

Conread position: 1-527
Cow position: chr21:45151933-45151379 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 319

Conread position: 1-528
Cow position: chr21:5238104-5238635 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 359
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 131, 87

Conread position: 1-528
Cow position: chr21:6833750-6834297 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 340

Conread position: 1-528
Cow position: chr21:7672831-7673360 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 288

Conread position: 1-528
Cow position: chr21:10071231-10070676 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 179

Conread position: 1-528
Cow position: chr21:11645287-11644719 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 388

Conread position: 1-528
Cow position: chr21:12153831-12154372 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 276

Conread position: 1-528
Cow position: chr21:14760283-14760804 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 53

Conread position: 1-528
Cow position: chr21:15584701-15584176 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 89

Conread position: 1-528
Cow position: chr21:20262636-20262100 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 278

Conread position: 1-528
Cow position: chr21:24297065-24296518 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 111

Conread position: 1-528
Cow position: chr21:24858009-24858563 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 200

Conread position: 1-528
Cow position: chr21:30849246-30848701 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 166

Conread position: 1-528
Cow position: chr21:32297804-32297261 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 1-528
Cow position: chr21:36762747-36763309 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 188

Conread position: 1-528
Cow position: chr21:37299162-37299707 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 288

Conread position: 1-528
Cow position: chr21:37479657-37480211 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 84

Conread position: 1-528
Cow position: chr21:37706719-37706165 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 44

Conread position: 1-528
Cow position: chr21:42500734-42501299 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 25

Conread position: 1-528
Cow position: chr21:43240557-43241087 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 344
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 101, 69

Conread position: 1-528
Cow position: chr21:45971457-45970932 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 63

Conread position: 1-528
Cow position: chr21:48638048-48637508 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 321

Conread position: 2-119
Cow position: chr21:18601359-18601477 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 2-119
Cow position: chr21:34586715-34586596 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 2-143
Cow position: chr21:29839865-29840005 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 119
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 99, 0

Conread position: 2-163
Cow position: chr21:1765501-1765340 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 96, 83

Conread position: 2-195
Cow position: chr21:25991371-25991174 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 100, 77

Conread position: 2-195
Cow position: chr21:30354871-30355069 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 7, 12

Conread position: 2-195
Cow position: chr21:36711898-36712092 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 91, 100

Conread position: 2-196
Cow position: chr21:19702223-19702419 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 2-197
Cow position: chr21:11740431-11740235 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 11

Conread position: 2-197
Cow position: chr21:28029096-28029293 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 2-200
Cow position: chr21:44254564-44254754 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 129, 48

Conread position: 2-205
Cow position: chr21:27406506-27406308 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 166
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 5, 94

Conread position: 2-263
Cow position: chr21:44804561-44804300 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 132, 199

Conread position: 2-268
Cow position: chr21:37941983-37941700 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 129, 87

Conread position: 2-308
Cow position: chr21:44331586-44331282 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 26, 17

Conread position: 2-351
Cow position: chr21:912262-911896 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 45

Conread position: 2-365
Cow position: chr21:28881848-28882222 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 95

Conread position: 2-367
Cow position: chr21:13897892-13898274 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 99

Conread position: 2-367
Cow position: chr21:20925806-20925419 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 53

Conread position: 2-384
Cow position: chr21:2904763-2904375 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 259

Conread position: 2-407
Cow position: chr21:38867868-38867462 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 294
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 49, 105

Conread position: 2-427
Cow position: chr21:4080053-4080494 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 144

Conread position: 2-427
Cow position: chr21:5595363-5595792 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 86

Conread position: 2-432
Cow position: chr21:42540522-42540071 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 11

Conread position: 2-436
Cow position: chr21:23785727-23786186 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 302
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 98, 138

Conread position: 2-456
Cow position: chr21:24887696-24888169 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 313
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 77, 58

Conread position: 2-463
Cow position: chr21:25764333-25764820 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 317

Conread position: 2-484
Cow position: chr21:38120802-38121302 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 296

Conread position: 2-515
Cow position: chr21:42905670-42905161 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 8

Conread position: 2-528
Cow position: chr21:81769-82306 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 199

Conread position: 2-528
Cow position: chr21:3236231-3236750 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 135

Conread position: 2-528
Cow position: chr21:20160383-20160925 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 334

Conread position: 2-528
Cow position: chr21:25344577-25345111 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 293

Conread position: 2-528
Cow position: chr21:27230093-27229556 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 94

Conread position: 2-528
Cow position: chr21:27863820-27863272 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 491

Conread position: 2-528
Cow position: chr21:28210884-28211424 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 335

Conread position: 3-195
Cow position: chr21:44755077-44754883 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 126, 92

Conread position: 4-242
Cow position: chr21:32814107-32813864 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 9

Conread position: 4-358
Cow position: chr21:29942705-29943081 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 268
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 96, 6

Conread position: 4-446
Cow position: chr21:2679260-2679716 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 86

Conread position: 5-109
Cow position: chr21:44861553-44861450 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 5-117
Cow position: chr21:21076830-21076942 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 96, 56

Conread position: 5-119
Cow position: chr21:19050785-19050670 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 5-124
Cow position: chr21:31276422-31276543 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 5-135
Cow position: chr21:34301608-34301739 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 5-148
Cow position: chr21:471333-471481 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 5-164
Cow position: chr21:43317580-43317414 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 141
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 96, 42

Conread position: 5-177
Cow position: chr21:22140636-22140463 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 25, 148

Conread position: 5-187
Cow position: chr21:33579891-33580073 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 151
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 29, 84

Conread position: 5-191
Cow position: chr21:2935052-2934860 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 97, 148

Conread position: 5-195
Cow position: chr21:14762807-14762613 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 5-195
Cow position: chr21:20162237-20162428 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 161

Conread position: 5-195
Cow position: chr21:21480477-21480289 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 154
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 96, 130

Conread position: 5-195
Cow position: chr21:25603479-25603294 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 85

Conread position: 5-196
Cow position: chr21:17410953-17410765 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 97, 74

Conread position: 5-197
Cow position: chr21:10032059-10032253 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 96, 0

Conread position: 5-197
Cow position: chr21:11707048-11706856 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 85

Conread position: 5-197
Cow position: chr21:16327258-16327074 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 96, 83

Conread position: 5-197
Cow position: chr21:16909757-16909954 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 95, 142

Conread position: 5-197
Cow position: chr21:17282405-17282599 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 5-197
Cow position: chr21:17452312-17452119 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 96, 65

Conread position: 5-197
Cow position: chr21:17714015-17714209 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 89

Conread position: 5-197
Cow position: chr21:21964733-21964919 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 96, 5

Conread position: 5-197
Cow position: chr21:34254578-34254386 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 70

Conread position: 5-197
Cow position: chr21:46132293-46132082 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 74, 0

Conread position: 5-197
Cow position: chr21:46462892-46463086 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 95, 65

Conread position: 5-200
Cow position: chr21:45972943-45972753 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 82, 8

Conread position: 5-211
Cow position: chr21:39434133-39434342 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 5-238
Cow position: chr21:3173823-3174063 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 96, 30

Conread position: 5-242
Cow position: chr21:16332386-16332631 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 8

Conread position: 5-304
Cow position: chr21:21967184-21967494 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 96, 123

Conread position: 5-323
Cow position: chr21:17412590-17412258 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 261

Conread position: 5-332
Cow position: chr21:20575752-20575423 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 219
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 92, 55

Conread position: 5-341
Cow position: chr21:21216439-21216081 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 96, 318

Conread position: 5-359
Cow position: chr21:9862919-9862564 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 97

Conread position: 5-373
Cow position: chr21:47802560-47802167 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 298

Conread position: 5-375
Cow position: chr21:45866641-45867028 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 5

Conread position: 5-383
Cow position: chr21:44019-44407 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 276
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 55, 80

Conread position: 5-384
Cow position: chr21:23192816-23192409 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 397

Conread position: 5-409
Cow position: chr21:44514967-44515392 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 276

Conread position: 5-430
Cow position: chr21:43631490-43631071 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 280
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 220, 96

Conread position: 5-432
Cow position: chr21:19363748-19363309 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 96

Conread position: 5-435
Cow position: chr21:28477327-28477783 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 314
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 96, 122

Conread position: 5-447
Cow position: chr21:9711013-9710563 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 309
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 50, 208

Conread position: 5-451
Cow position: chr21:7132759-7132317 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 21

Conread position: 5-455
Cow position: chr21:28429152-28429621 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 80

Conread position: 5-455
Cow position: chr21:33209901-33210365 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 84

Conread position: 5-455
Cow position: chr21:45474053-45473581 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 321
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 131, 89

Conread position: 5-463
Cow position: chr21:26648302-26647831 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 5-464
Cow position: chr21:33997523-33997044 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 237

Conread position: 5-497
Cow position: chr21:23606376-23606887 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 288

Conread position: 5-506
Cow position: chr21:9415945-9416475 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 49

Conread position: 5-506
Cow position: chr21:13089774-13089240 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 8

Conread position: 5-509
Cow position: chr21:17433550-17433039 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 86

Conread position: 5-513
Cow position: chr21:34738300-34738808 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 207

Conread position: 5-515
Cow position: chr21:13764683-13765181 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 321
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 130, 44

Conread position: 5-524
Cow position: chr21:19196466-19195918 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 206

Conread position: 5-524
Cow position: chr21:46912246-46912792 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 139

Conread position: 5-527
Cow position: chr21:12366089-12366619 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 247

Conread position: 5-527
Cow position: chr21:46263879-46264437 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 80

Conread position: 5-527
Cow position: chr21:47760479-47761017 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 132

Conread position: 5-528
Cow position: chr21:18289365-18289924 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 87

Conread position: 5-528
Cow position: chr21:19957932-19958463 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 353
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 220, 83

Conread position: 5-528
Cow position: chr21:22719078-22718536 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 89

Conread position: 5-528
Cow position: chr21:33983108-33982567 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 197

Conread position: 5-528
Cow position: chr21:44566003-44565482 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 186

Conread position: 5-528
Cow position: chr21:46849417-46848886 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 78

Conread position: 6-104
Cow position: chr21:18818626-18818530 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 6-119
Cow position: chr21:16889811-16889697 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 6-119
Cow position: chr21:27619487-27619374 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 105, 95

Conread position: 6-119
Cow position: chr21:31040736-31040620 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 6-122
Cow position: chr21:3496474-3496357 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 6-125
Cow position: chr21:39019962-39020083 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 6-127
Cow position: chr21:45373810-45373932 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 0

Conread position: 6-128
Cow position: chr21:2663500-2663380 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 95, 58

Conread position: 6-136
Cow position: chr21:39672377-39672508 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 110
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 6-138
Cow position: chr21:11024287-11024153 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 0

Conread position: 6-138
Cow position: chr21:11353525-11353659 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 0

Conread position: 6-138
Cow position: chr21:25738174-25738040 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 0

Conread position: 6-138
Cow position: chr21:39675042-39675177 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 114
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 6-139
Cow position: chr21:19350829-19350694 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 114
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 95, 0

Conread position: 6-175
Cow position: chr21:17208198-17208361 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 96, 47

Conread position: 6-176
Cow position: chr21:18155716-18155888 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 147
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 6-176
Cow position: chr21:34511539-34511366 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 6-182
Cow position: chr21:42917826-42918004 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 6-186
Cow position: chr21:4665781-4665599 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 6-186
Cow position: chr21:15905525-15905707 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 6-187
Cow position: chr21:7047154-7046971 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 6-187
Cow position: chr21:21963181-21963364 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 6-187
Cow position: chr21:26628800-26628983 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 6-187
Cow position: chr21:26632960-26632778 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 54

Conread position: 6-187
Cow position: chr21:47978300-47978482 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 6-194
Cow position: chr21:33415088-33414898 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 125, 0

Conread position: 6-195
Cow position: chr21:2871013-2870822 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 95, 0

Conread position: 6-195
Cow position: chr21:17370180-17369989 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 6-195
Cow position: chr21:34899651-34899460 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 95, 0

Conread position: 6-195
Cow position: chr21:42464138-42463947 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 157
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 94, 82

Conread position: 6-196
Cow position: chr21:12507115-12507306 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 6-196
Cow position: chr21:18712989-18713178 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:48176-48371 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 6-197
Cow position: chr21:443733-443926 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:661904-661711 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:1179233-1179040 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:2938732-2938925 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:3364492-3364685 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:3923945-3924138 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:4092687-4092878 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 95, 84

Conread position: 6-197
Cow position: chr21:4473317-4473125 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 94, 180

Conread position: 6-197
Cow position: chr21:4569795-4569600 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 140

Conread position: 6-197
Cow position: chr21:4732514-4732321 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:4897950-4897757 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:5790928-5791121 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:7038160-7037967 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:7525150-7525343 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:7597238-7597038 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 6-197
Cow position: chr21:8981421-8981234 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 95, 106

Conread position: 6-197
Cow position: chr21:9743876-9743683 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:10075231-10075040 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 95, 24

Conread position: 6-197
Cow position: chr21:10436872-10437065 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:10756944-10757137 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:11143817-11143624 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:11292741-11292934 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:12338876-12339065 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 157
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 96, 54

Conread position: 6-197
Cow position: chr21:13168853-13169046 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:13632592-13632785 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:13930840-13931033 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:13954214-13954409 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:16575414-16575221 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:16795043-16795236 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:17539437-17539630 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:18574547-18574740 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:20370398-20370591 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:21624117-21624310 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:21910058-21910251 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:22100167-22099974 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:23329309-23329116 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:24236816-24237008 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:25042192-25042385 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 96, 0

Conread position: 6-197
Cow position: chr21:25076685-25076492 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:25480292-25480485 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:25598697-25598889 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:26071449-26071256 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:26854660-26854467 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:26875624-26875820 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:27036481-27036674 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:27147521-27147328 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:27500498-27500691 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:29424092-29424282 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 95, 110

Conread position: 6-197
Cow position: chr21:30571047-30570854 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:30965909-30965717 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 148

Conread position: 6-197
Cow position: chr21:32395978-32395786 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 95, 52

Conread position: 6-197
Cow position: chr21:33235501-33235694 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:33709467-33709274 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:33770710-33770903 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:33831941-33831754 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 88

Conread position: 6-197
Cow position: chr21:33901459-33901654 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:33993363-33993166 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 6-197
Cow position: chr21:34074670-34074863 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:34181698-34181886 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 140

Conread position: 6-197
Cow position: chr21:34900708-34900901 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:36892199-36892006 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:36973111-36972918 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:37517662-37517469 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 6-197
Cow position: chr21:39224915-39224722 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:39486241-39486049 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 95, 24

Conread position: 6-197
Cow position: chr21:39561300-39561493 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:40479294-40479487 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:41795691-41795498 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:45841970-45841775 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:46037527-46037340 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 35

Conread position: 6-197
Cow position: chr21:47139990-47139797 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 6-197
Cow position: chr21:47745970-47745779 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 95, 141

Conread position: 6-197
Cow position: chr21:48459165-48458972 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 6-199
Cow position: chr21:612064-611871 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 95

Conread position: 6-199
Cow position: chr21:2514877-2515069 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 184

Conread position: 6-199
Cow position: chr21:30688486-30688291 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 6-199
Cow position: chr21:38651218-38651024 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 165

Conread position: 6-200
Cow position: chr21:33245458-33245263 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 95, 148

Conread position: 6-233
Cow position: chr21:5808718-5808481 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 6-233
Cow position: chr21:40013659-40013432 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 95, 165

Conread position: 6-248
Cow position: chr21:11759761-11759521 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 95, 181

Conread position: 6-249
Cow position: chr21:44122758-44123003 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 95, 195

Conread position: 6-268
Cow position: chr21:13395259-13395540 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 91, 75

Conread position: 6-289
Cow position: chr21:48262838-48263130 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 125, 83

Conread position: 6-312
Cow position: chr21:18494681-18495000 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 240
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 198, 64

Conread position: 6-407
Cow position: chr21:25536698-25537124 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 285
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 110, 156

Conread position: 6-433
Cow position: chr21:3253881-3254303 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 285
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 128, 66

Conread position: 6-435
Cow position: chr21:4559042-4558620 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 285
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 95, 195

Conread position: 6-457
Cow position: chr21:42414396-42413918 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 83

Conread position: 6-477
Cow position: chr21:39401303-39401781 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 131

Conread position: 6-526
Cow position: chr21:10263745-10264280 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 53

Conread position: 6-528
Cow position: chr21:23586566-23587119 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 48

Conread position: 6-528
Cow position: chr21:34010684-34010149 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 64

Conread position: 6-528
Cow position: chr21:38900484-38901010 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 43

Conread position: 7-167
Cow position: chr21:32190873-32191039 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 7-187
Cow position: chr21:28259701-28259883 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 7-195
Cow position: chr21:17218908-17218725 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 95, 6

Conread position: 7-197
Cow position: chr21:426496-426685 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 7-197
Cow position: chr21:725186-724996 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 94

Conread position: 7-197
Cow position: chr21:2472743-2472551 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 7-197
Cow position: chr21:4428392-4428584 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 93, 0

Conread position: 7-197
Cow position: chr21:34955902-34956091 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 129

Conread position: 7-197
Cow position: chr21:42170335-42170526 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 95, 47

Conread position: 7-200
Cow position: chr21:703462-703268 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 7-230
Cow position: chr21:27081-27302 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 94, 176

Conread position: 7-359
Cow position: chr21:1463937-1464308 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 94, 107

Conread position: 7-414
Cow position: chr21:32574435-32574863 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 178

Conread position: 7-435
Cow position: chr21:19698862-19698427 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 292
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 95, 89

Conread position: 7-435
Cow position: chr21:32237004-32237433 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 91

Conread position: 7-435
Cow position: chr21:46973431-46972996 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 331

Conread position: 7-436
Cow position: chr21:31576218-31576646 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 94

Conread position: 7-459
Cow position: chr21:395582-396048 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 94

Conread position: 7-474
Cow position: chr21:33263555-33264040 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 89

Conread position: 7-499
Cow position: chr21:36756319-36756830 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 61

Conread position: 7-527
Cow position: chr21:5898689-5898162 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 13

Conread position: 8-195
Cow position: chr21:876126-876313 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 99, 5

Conread position: 8-197
Cow position: chr21:21968023-21968209 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 94, 76

Conread position: 8-258
Cow position: chr21:5459690-5459434 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 90, 5

Conread position: 8-515
Cow position: chr21:25127315-25127841 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 75

Conread position: 10-137
Cow position: chr21:42442900-42442772 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 108
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 10-168
Cow position: chr21:19170203-19170047 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 91, 77

Conread position: 10-177
Cow position: chr21:10642308-10642473 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 92, 44

Conread position: 10-190
Cow position: chr21:29225352-29225173 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 148
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 92, 79

Conread position: 10-195
Cow position: chr21:23658251-23658438 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 10-195
Cow position: chr21:25173576-25173764 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 10-197
Cow position: chr21:684186-684376 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 10-197
Cow position: chr21:3818816-3819004 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 91, 18

Conread position: 10-197
Cow position: chr21:5641801-5641612 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 91, 0

Conread position: 10-197
Cow position: chr21:7452418-7452232 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 140, 88

Conread position: 10-197
Cow position: chr21:17262405-17262220 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 91, 50

Conread position: 10-197
Cow position: chr21:19501732-19501921 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 91, 0

Conread position: 10-197
Cow position: chr21:26399748-26399559 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 91, 0

Conread position: 10-197
Cow position: chr21:30134826-30135012 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 91, 61

Conread position: 10-197
Cow position: chr21:30566727-30566915 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 91, 19

Conread position: 10-197
Cow position: chr21:30655676-30655865 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 91, 0

Conread position: 10-197
Cow position: chr21:31512234-31512046 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 91, 110

Conread position: 10-197
Cow position: chr21:38848763-38848574 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 91, 0

Conread position: 10-197
Cow position: chr21:47649375-47649563 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 37, 31

Conread position: 10-199
Cow position: chr21:30313622-30313806 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 10-200
Cow position: chr21:27288013-27288205 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 91, 0

Conread position: 10-249
Cow position: chr21:11509973-11510214 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 91, 191

Conread position: 10-328
Cow position: chr21:41957464-41957132 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 12

Conread position: 10-376
Cow position: chr21:11639728-11640117 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 272
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 91, 38

Conread position: 10-401
Cow position: chr21:13489350-13489766 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 287
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 91, 106

Conread position: 10-403
Cow position: chr21:10726988-10727399 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 10-435
Cow position: chr21:10854293-10854736 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 286
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 91, 218

Conread position: 10-528
Cow position: chr21:4282157-4281636 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 79

Conread position: 11-197
Cow position: chr21:23293447-23293261 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 150

Conread position: 11-234
Cow position: chr21:39883776-39884008 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 168, 91

Conread position: 12-123
Cow position: chr21:22464498-22464611 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 12-197
Cow position: chr21:37662217-37662023 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 13-169
Cow position: chr21:45275327-45275484 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 88, 60

Conread position: 13-181
Cow position: chr21:8274472-8274309 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 13-194
Cow position: chr21:12466066-12466249 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 13-195
Cow position: chr21:220672-220860 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 13-195
Cow position: chr21:3614071-3614251 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 89, 49

Conread position: 13-195
Cow position: chr21:16093432-16093615 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 13-195
Cow position: chr21:22370856-22370672 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 170

Conread position: 13-195
Cow position: chr21:25475849-25476025 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 13-195
Cow position: chr21:33949962-33950143 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 88, 144

Conread position: 13-195
Cow position: chr21:36680421-36680601 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 136

Conread position: 13-197
Cow position: chr21:697275-697093 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 133, 81

Conread position: 13-197
Cow position: chr21:2359602-2359788 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 88, 0

Conread position: 13-197
Cow position: chr21:2491080-2490894 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 88, 0

Conread position: 13-197
Cow position: chr21:27607653-27607467 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 88, 0

Conread position: 13-197
Cow position: chr21:30250495-30250313 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 150
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 89, 41

Conread position: 13-197
Cow position: chr21:35899521-35899704 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 151
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 95, 33

Conread position: 13-197
Cow position: chr21:39429658-39429844 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 13-199
Cow position: chr21:28599480-28599670 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 156
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 89, 42

Conread position: 13-199
Cow position: chr21:36657290-36657472 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 82

Conread position: 13-200
Cow position: chr21:40244144-40244333 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 13-201
Cow position: chr21:17411797-17411607 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 13-259
Cow position: chr21:36157930-36157683 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 88, 100

Conread position: 13-279
Cow position: chr21:34591476-34591205 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 254

Conread position: 13-295
Cow position: chr21:23683260-23683562 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 13-313
Cow position: chr21:20107036-20106724 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 75, 81

Conread position: 13-314
Cow position: chr21:17479094-17479405 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 88, 114

Conread position: 13-314
Cow position: chr21:18932202-18932518 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 88, 125

Conread position: 13-317
Cow position: chr21:13703976-13703649 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 38

Conread position: 13-323
Cow position: chr21:17482469-17482782 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 89, 143

Conread position: 13-327
Cow position: chr21:40058515-40058849 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 323

Conread position: 13-361
Cow position: chr21:42914036-42913663 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 13-367
Cow position: chr21:16612339-16612711 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 260

Conread position: 13-436
Cow position: chr21:15742387-15741930 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 299
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 89, 0

Conread position: 13-446
Cow position: chr21:36642617-36643069 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 287

Conread position: 13-455
Cow position: chr21:28442444-28442909 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 223

Conread position: 13-484
Cow position: chr21:9940468-9939984 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 326
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 117, 76

Conread position: 13-515
Cow position: chr21:38691903-38692437 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 12

Conread position: 13-519
Cow position: chr21:28734202-28733673 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 370

Conread position: 13-528
Cow position: chr21:15545655-15545115 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 136

Conread position: 13-528
Cow position: chr21:23821878-23822399 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 141

Conread position: 13-528
Cow position: chr21:30897133-30897674 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 356
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 165, 88

Conread position: 14-173
Cow position: chr21:2847321-2847158 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 14-180
Cow position: chr21:15531078-15531242 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 86

Conread position: 14-190
Cow position: chr21:44641017-44641197 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 47

Conread position: 14-192
Cow position: chr21:36297190-36297369 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 14-197
Cow position: chr21:20588742-20588927 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 14-367
Cow position: chr21:17414817-17414463 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 240
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 87, 74

Conread position: 14-435
Cow position: chr21:5566702-5567140 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 293
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 122, 84

Conread position: 14-478
Cow position: chr21:13128385-13127901 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 35

Conread position: 15-143
Cow position: chr21:31253039-31253166 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 15-168
Cow position: chr21:17839742-17839897 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 15-170
Cow position: chr21:34894923-34895078 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 116

Conread position: 15-177
Cow position: chr21:1803042-1802878 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 15-177
Cow position: chr21:28998195-28998030 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 86, 0

Conread position: 15-195
Cow position: chr21:37352706-37352527 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 148, 86

Conread position: 15-200
Cow position: chr21:9201905-9202085 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 87, 18

Conread position: 15-200
Cow position: chr21:13250628-13250438 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 159

Conread position: 15-200
Cow position: chr21:19062396-19062570 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 15-200
Cow position: chr21:31278494-31278678 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 85

Conread position: 15-287
Cow position: chr21:18935484-18935740 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 21

Conread position: 15-296
Cow position: chr21:4189544-4189851 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 54, 0

Conread position: 15-423
Cow position: chr21:33729145-33729572 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 237

Conread position: 15-528
Cow position: chr21:29069616-29069076 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 16-173
Cow position: chr21:12331474-12331632 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 77

Conread position: 16-279
Cow position: chr21:13763338-13763618 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 85, 112

Conread position: 16-289
Cow position: chr21:26097697-26097422 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 87, 242

Conread position: 16-343
Cow position: chr21:46626782-46627110 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 72, 52

Conread position: 16-429
Cow position: chr21:43357548-43357108 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 122

Conread position: 16-528
Cow position: chr21:30231987-30231449 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 73

Conread position: 16-528
Cow position: chr21:34653800-34654317 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 38

Conread position: 17-197
Cow position: chr21:8888580-8888762 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 84, 0

Conread position: 17-197
Cow position: chr21:20377648-20377470 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 58

Conread position: 17-528
Cow position: chr21:18568935-18568390 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 73

Conread position: 18-246
Cow position: chr21:29954712-29954478 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 20-119
Cow position: chr21:11705313-11705413 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 20-134
Cow position: chr21:41039935-41040050 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 20-196
Cow position: chr21:21600943-21600765 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 82, 0

Conread position: 20-197
Cow position: chr21:17205000-17204819 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 20-197
Cow position: chr21:28443644-28443482 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 111, 55

Conread position: 20-275
Cow position: chr21:14727765-14728002 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 82, 133

Conread position: 20-330
Cow position: chr21:42023852-42024171 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 83

Conread position: 21-119
Cow position: chr21:42136132-42136034 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 42

Conread position: 21-195
Cow position: chr21:26865164-26865336 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 80, 52

Conread position: 21-197
Cow position: chr21:6862961-6862783 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 21-242
Cow position: chr21:2906179-2905954 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 91, 80

Conread position: 22-197
Cow position: chr21:39418301-39418476 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 19

Conread position: 23-195
Cow position: chr21:36357845-36358018 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 77, 123

Conread position: 23-196
Cow position: chr21:10882146-10882329 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 23-197
Cow position: chr21:1457901-1457725 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 78, 0

Conread position: 23-197
Cow position: chr21:4957470-4957294 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 0

Conread position: 23-197
Cow position: chr21:33632729-33632553 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 23-198
Cow position: chr21:48108133-48107966 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 107, 7

Conread position: 23-304
Cow position: chr21:18934643-18934942 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 79, 123

Conread position: 23-313
Cow position: chr21:36793602-36793924 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 78, 0

Conread position: 23-375
Cow position: chr21:44108729-44109097 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 75

Conread position: 23-441
Cow position: chr21:1529508-1529075 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 289
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 109, 277

Conread position: 23-458
Cow position: chr21:30607383-30606916 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 439

Conread position: 23-487
Cow position: chr21:8420385-8420828 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 302
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 108, 64

Conread position: 23-521
Cow position: chr21:22855939-22856460 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 91

Conread position: 23-528
Cow position: chr21:23672466-23672992 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 79

Conread position: 24-194
Cow position: chr21:43603501-43603332 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 74

Conread position: 24-197
Cow position: chr21:19974469-19974644 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 72, 29

Conread position: 24-197
Cow position: chr21:39822089-39821914 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 77, 0

Conread position: 24-229
Cow position: chr21:23309760-23309966 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 74, 70

Conread position: 24-469
Cow position: chr21:23801399-23800937 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 44

Conread position: 24-478
Cow position: chr21:33562735-33563203 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 101

Conread position: 25-194
Cow position: chr21:8546495-8546315 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 149
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 77, 112

Conread position: 25-199
Cow position: chr21:39313447-39313275 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 150

Conread position: 25-200
Cow position: chr21:22311499-22311670 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 76, 139

Conread position: 25-434
Cow position: chr21:17475542-17475970 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 283
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 65

Conread position: 25-495
Cow position: chr21:17511501-17511996 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 45

Conread position: 26-478
Cow position: chr21:36795323-36795803 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 26-499
Cow position: chr21:17643240-17642771 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 75

Conread position: 26-528
Cow position: chr21:39889021-39888479 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 302

Conread position: 27-197
Cow position: chr21:35919312-35919484 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 28-238
Cow position: chr21:40524727-40524508 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 28-437
Cow position: chr21:24945172-24944739 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 288
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 77, 273

Conread position: 28-528
Cow position: chr21:41155587-41156118 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 95

Conread position: 29-197
Cow position: chr21:5418576-5418755 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 72, 138

Conread position: 29-199
Cow position: chr21:10966959-10967131 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 72, 0

Conread position: 30-195
Cow position: chr21:5482478-5482645 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 30-197
Cow position: chr21:32356627-32356458 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 30-197
Cow position: chr21:43251850-43251681 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 30-204
Cow position: chr21:25282060-25281891 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 30-238
Cow position: chr21:15304501-15304286 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 71, 138

Conread position: 30-249
Cow position: chr21:27336549-27336770 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 171

Conread position: 30-285
Cow position: chr21:41040592-41040847 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 198

Conread position: 30-288
Cow position: chr21:23478989-23478738 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 101, 17

Conread position: 30-431
Cow position: chr21:16188068-16187657 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 38

Conread position: 31-197
Cow position: chr21:5985027-5985194 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 31-526
Cow position: chr21:44114402-44113891 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 337
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 47, 103

Conread position: 32-293
Cow position: chr21:18783954-18783673 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 106

Conread position: 33-195
Cow position: chr21:16230832-16230995 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 34-197
Cow position: chr21:17417032-17416866 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 35-139
Cow position: chr21:36377069-36377175 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 35-200
Cow position: chr21:1641980-1641819 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 67, 54

Conread position: 35-528
Cow position: chr21:5971103-5970599 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 5

Conread position: 36-341
Cow position: chr21:15586601-15586295 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 36-489
Cow position: chr21:13728024-13727553 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 313
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 32

Conread position: 38-195
Cow position: chr21:14462035-14461876 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 38-197
Cow position: chr21:26241563-26241721 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 138
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 64, 43

Conread position: 40-197
Cow position: chr21:30650791-30650631 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 40-197
Cow position: chr21:34011366-34011204 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 41-167
Cow position: chr21:14383974-14384102 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 41-469
Cow position: chr21:36819485-36819044 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 312
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 78, 60

Conread position: 41-485
Cow position: chr21:33350483-33350948 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 48

Conread position: 41-524
Cow position: chr21:15867053-15867544 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 327
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 47

Conread position: 41-527
Cow position: chr21:44252090-44251595 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 229

Conread position: 41-528
Cow position: chr21:3585618-3585117 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 80

Conread position: 42-197
Cow position: chr21:34877538-34877382 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 11

Conread position: 42-268
Cow position: chr21:16166894-16166651 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 42-268
Cow position: chr21:49646436-49646198 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 42-507
Cow position: chr21:17722764-17723242 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 316
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 11

Conread position: 42-527
Cow position: chr21:6713800-6713278 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 254

Conread position: 42-527
Cow position: chr21:13035310-13034789 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 216

Conread position: 43-197
Cow position: chr21:21223024-21223185 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 44-197
Cow position: chr21:4811992-4811841 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 57, 83

Conread position: 44-199
Cow position: chr21:36857371-36857525 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 44-200
Cow position: chr21:35395547-35395388 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 44-528
Cow position: chr21:39403797-39403281 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 261

Conread position: 45-400
Cow position: chr21:23150277-23149902 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 320

Conread position: 45-528
Cow position: chr21:44826133-44825628 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 34

Conread position: 47-202
Cow position: chr21:19070845-19070687 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 146

Conread position: 49-195
Cow position: chr21:30859119-30859266 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 51-195
Cow position: chr21:25184041-25183895 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 51-527
Cow position: chr21:40899086-40899587 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 9

Conread position: 51-528
Cow position: chr21:49700288-49699790 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 267

Conread position: 52-475
Cow position: chr21:23322332-23321881 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 85

Conread position: 53-220
Cow position: chr21:17049342-17049512 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 54-197
Cow position: chr21:4267599-4267454 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 54-459
Cow position: chr21:10151546-10151986 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 56-197
Cow position: chr21:24348417-24348560 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 59-195
Cow position: chr21:28919867-28919732 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 117
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 72, 41

Conread position: 59-197
Cow position: chr21:13410067-13409927 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 122
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 59-413
Cow position: chr21:5636965-5636588 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 273

Conread position: 61-528
Cow position: chr21:29015131-29014670 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 31

Conread position: 62-528
Cow position: chr21:38917977-38918449 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 27

Conread position: 63-525
Cow position: chr21:1483252-1483718 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 312
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 25

Conread position: 65-190
Cow position: chr21:28907890-28907756 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 114

Conread position: 67-528
Cow position: chr21:27569400-27568912 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 76

Conread position: 68-197
Cow position: chr21:30257939-30257808 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 112
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 70-526
Cow position: chr21:33489-33978 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 21

Conread position: 72-435
Cow position: chr21:41878245-41878623 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 102

Conread position: 72-455
Cow position: chr21:42348909-42348519 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 137

Conread position: 72-526
Cow position: chr21:27124359-27123880 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 320
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 183

Conread position: 72-528
Cow position: chr21:15445310-15444835 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 311

Conread position: 73-197
Cow position: chr21:9278138-9278268 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 77-196
Cow position: chr21:11877158-11877274 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 106
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 25, 73

Conread position: 78-322
Cow position: chr21:39765626-39765883 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 11

Conread position: 78-528
Cow position: chr21:8351526-8351047 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 328
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 23

Conread position: 79-459
Cow position: chr21:28626017-28626418 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 284
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 24, 78

Conread position: 81-479
Cow position: chr21:40168830-40168425 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 55

Conread position: 81-528
Cow position: chr21:24797473-24797902 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 307
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 56

Conread position: 82-197
Cow position: chr21:17936147-17936266 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 82-414
Cow position: chr21:10601589-10601242 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 29, 183

Conread position: 86-197
Cow position: chr21:13316166-13316279 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 89-497
Cow position: chr21:45330156-45329738 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 298
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 13, 81

Conread position: 90-293
Cow position: chr21:13303606-13303831 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 207

Conread position: 90-436
Cow position: chr21:31662247-31662622 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 249
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 90-528
Cow position: chr21:23535500-23535960 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 215

Conread position: 90-528
Cow position: chr21:30592511-30592067 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 27

Conread position: 94-190
Cow position: chr21:9359498-9359595 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 90
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 9

Conread position: 98-356
Cow position: chr21:31676294-31676574 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 33, 218

Conread position: 101-199
Cow position: chr21:41620918-41621018 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 101-200
Cow position: chr21:12075554-12075458 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 101-268
Cow position: chr21:24669211-24669379 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 98

Conread position: 101-335
Cow position: chr21:37361675-37361423 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 196
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 23, 229

Conread position: 101-385
Cow position: chr21:3381282-3380974 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 98, 0

Conread position: 101-410
Cow position: chr21:47067088-47066772 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 34

Conread position: 101-463
Cow position: chr21:40133954-40134342 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 268
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 109

Conread position: 101-473
Cow position: chr21:41597614-41598006 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 99

Conread position: 101-475
Cow position: chr21:8618073-8618461 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 30, 228

Conread position: 101-478
Cow position: chr21:29484783-29485178 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 295

Conread position: 101-494
Cow position: chr21:3818015-3818426 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 239

Conread position: 101-499
Cow position: chr21:41579550-41579973 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 291
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 78, 35

Conread position: 101-506
Cow position: chr21:19258625-19259041 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 287
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 30, 198

Conread position: 101-515
Cow position: chr21:24094945-24094526 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 294
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 30, 209

Conread position: 101-516
Cow position: chr21:3498297-3498731 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 293
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 30, 201

Conread position: 101-525
Cow position: chr21:27521526-27521097 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 35

Conread position: 101-528
Cow position: chr21:8206589-8207004 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 79

Conread position: 101-528
Cow position: chr21:9310842-9311302 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 308
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 33, 248

Conread position: 101-528
Cow position: chr21:19083801-19083338 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 313
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 88, 237

Conread position: 101-528
Cow position: chr21:47465325-47464872 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 89

Conread position: 102-197
Cow position: chr21:42145716-42145813 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 102-478
Cow position: chr21:26244734-26245114 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 12

Conread position: 102-528
Cow position: chr21:18318526-18318960 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 278
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 49, 109

Conread position: 103-435
Cow position: chr21:13738372-13738706 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 254
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 95, 33

Conread position: 103-435
Cow position: chr21:18940756-18940427 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 97, 34

Conread position: 103-449
Cow position: chr21:33791567-33791211 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 236

Conread position: 103-528
Cow position: chr21:22860803-22861239 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 326

Conread position: 104-527
Cow position: chr21:3361212-3360770 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 228

Conread position: 105-197
Cow position: chr21:42465632-42465725 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 85
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 105-481
Cow position: chr21:32339932-32339537 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 21

Conread position: 106-512
Cow position: chr21:29979953-29979541 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 267
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 142

Conread position: 106-528
Cow position: chr21:38449648-38449205 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 301

Conread position: 107-289
Cow position: chr21:34835618-34835426 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 41

Conread position: 107-443
Cow position: chr21:28955327-28955666 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 25, 96

Conread position: 107-453
Cow position: chr21:21077134-21077484 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 94

Conread position: 107-455
Cow position: chr21:45355641-45356010 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 29, 225

Conread position: 107-482
Cow position: chr21:18780165-18779774 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 270
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 71, 30

Conread position: 107-485
Cow position: chr21:12801939-12801540 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 275
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 91, 29

Conread position: 107-487
Cow position: chr21:13752698-13753083 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 249
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 118

Conread position: 107-515
Cow position: chr21:1058882-1059300 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 295
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 92, 264

Conread position: 107-528
Cow position: chr21:6051311-6051752 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 225

Conread position: 107-528
Cow position: chr21:13585253-13584805 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 33

Conread position: 107-528
Cow position: chr21:14464382-14464833 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 315
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 78, 202

Conread position: 107-528
Cow position: chr21:29002357-29001899 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 305
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 24, 350

Conread position: 107-528
Cow position: chr21:42135819-42135372 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 310
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 25, 386

Conread position: 108-453
Cow position: chr21:1591357-1591722 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 79, 28

Conread position: 108-528
Cow position: chr21:42841785-42841338 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 303
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 87, 27

Conread position: 109-259
Cow position: chr21:9334452-9334283 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 110-459
Cow position: chr21:45850902-45850526 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 260
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 89, 294

Conread position: 110-528
Cow position: chr21:17193952-17193501 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 111-203
Cow position: chr21:30237294-30237202 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 70

Conread position: 111-455
Cow position: chr21:5426755-5427114 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 23

Conread position: 111-528
Cow position: chr21:32559545-32559124 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 84

Conread position: 112-477
Cow position: chr21:13365151-13365539 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 280

Conread position: 113-448
Cow position: chr21:18828498-18828135 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 244
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 78, 0

Conread position: 113-506
Cow position: chr21:47764301-47763892 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 211

Conread position: 113-528
Cow position: chr21:14452041-14452480 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 71

Conread position: 114-197
Cow position: chr21:22464870-22464954 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 114-376
Cow position: chr21:6102457-6102166 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 176

Conread position: 114-527
Cow position: chr21:40589671-40589234 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 143

Conread position: 115-200
Cow position: chr21:4268686-4268772 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 115-432
Cow position: chr21:18845202-18844861 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 226
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 48

Conread position: 115-525
Cow position: chr21:28027616-28028043 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 302
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 191

Conread position: 118-432
Cow position: chr21:15610971-15611291 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 83, 18

Conread position: 118-479
Cow position: chr21:37345286-37344899 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 219

Conread position: 119-463
Cow position: chr21:28190845-28191217 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 257
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 17, 171

Conread position: 120-413
Cow position: chr21:13488337-13488659 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 16, 106

Conread position: 120-433
Cow position: chr21:15911218-15911552 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 291

Conread position: 121-528
Cow position: chr21:802475-802076 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 74

Conread position: 122-527
Cow position: chr21:17183741-17184164 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 124-452
Cow position: chr21:8235722-8235388 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 72, 208

Conread position: 125-478
Cow position: chr21:18790733-18790366 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 260
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 10, 208

Conread position: 129-527
Cow position: chr21:22194283-22193848 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 284
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 72, 0

Conread position: 130-497
Cow position: chr21:27146163-27145772 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 276
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 69, 209

Conread position: 130-528
Cow position: chr21:28919673-28919284 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 268
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 157, 101

Conread position: 131-496
Cow position: chr21:712764-713161 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 278
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 64, 0

Conread position: 131-515
Cow position: chr21:10007812-10007403 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 265
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 125

Conread position: 132-499
Cow position: chr21:21169664-21169275 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 268

Conread position: 133-466
Cow position: chr21:10000912-10001263 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 43

Conread position: 135-528
Cow position: chr21:28244310-28244714 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 9

Conread position: 137-527
Cow position: chr21:10114493-10114087 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 150

Conread position: 142-527
Cow position: chr21:41590716-41590320 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 57, 179

Conread position: 143-525
Cow position: chr21:13840164-13840572 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 276
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 56, 38

Conread position: 145-454
Cow position: chr21:45921215-45920883 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 146-528
Cow position: chr21:16083236-16082865 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 249
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 79, 53

Conread position: 147-478
Cow position: chr21:24642364-24642710 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 264

Conread position: 150-526
Cow position: chr21:12749376-12748991 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 242
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 181

Conread position: 151-528
Cow position: chr21:44658451-44658808 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 254
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 38

Conread position: 155-391
Cow position: chr21:18041989-18041737 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 163

Conread position: 155-528
Cow position: chr21:10005032-10004636 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 85

Conread position: 156-477
Cow position: chr21:19673669-19674005 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 219
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 133

Conread position: 157-528
Cow position: chr21:7825320-7824943 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 253
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 42

Conread position: 158-506
Cow position: chr21:42007603-42007234 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 206

Conread position: 169-528
Cow position: chr21:5464638-5464994 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 244
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 114, 29

Conread position: 170-458
Cow position: chr21:2810275-2809985 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 53, 215

Conread position: 179-528
Cow position: chr21:30835251-30835613 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 18, 196

Conread position: 181-432
Cow position: chr21:45330709-45330456 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 8

Conread position: 181-527
Cow position: chr21:17637797-17638141 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 53, 7

Conread position: 181-528
Cow position: chr21:17560035-17559669 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 243
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 182-526
Cow position: chr21:37790108-37789757 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 18, 44

Conread position: 186-528
Cow position: chr21:21686316-21686664 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 234
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 13, 100

Conread position: 187-528
Cow position: chr21:11740216-11739872 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 98, 221

Conread position: 188-528
Cow position: chr21:22121423-22121749 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 234
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 65, 92

Conread position: 189-460
Cow position: chr21:22465099-22465372 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 131

Conread position: 189-481
Cow position: chr21:29978854-29978556 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 64, 0

Conread position: 189-528
Cow position: chr21:9301120-9301472 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 224
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 9, 49

Conread position: 191-528
Cow position: chr21:45906717-45906374 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 93

Conread position: 193-497
Cow position: chr21:9990422-9990727 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 60, 90

Conread position: 194-372
Cow position: chr21:39450258-39450068 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 194-407
Cow position: chr21:17856454-17856670 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 146
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 42

Conread position: 194-435
Cow position: chr21:36789704-36789950 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 42, 57

Conread position: 194-458
Cow position: chr21:21077508-21077780 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 122

Conread position: 194-458
Cow position: chr21:45262904-45262630 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 46, 19

Conread position: 194-471
Cow position: chr21:25629001-25628721 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 29, 121

Conread position: 194-472
Cow position: chr21:42022197-42022463 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 194-475
Cow position: chr21:2657726-2658006 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 13, 78

Conread position: 194-478
Cow position: chr21:30250283-30250004 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 91, 72

Conread position: 194-478
Cow position: chr21:36297397-36297690 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 194
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 42, 163

Conread position: 194-499
Cow position: chr21:34151487-34151798 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 40, 198

Conread position: 194-515
Cow position: chr21:27810315-27810626 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 130, 72

Conread position: 194-528
Cow position: chr21:957579-957916 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 64

Conread position: 194-528
Cow position: chr21:10673038-10673357 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 219
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 43, 105

Conread position: 194-528
Cow position: chr21:12462063-12461722 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 276

Conread position: 194-528
Cow position: chr21:27712308-27711987 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 212, 44

Conread position: 194-528
Cow position: chr21:41621031-41621375 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 197-528
Cow position: chr21:6997855-6998188 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 86, 121

Conread position: 197-528
Cow position: chr21:22210334-22209996 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 231
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 49, 125

Conread position: 198-407
Cow position: chr21:38664549-38664765 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 36, 78

Conread position: 198-524
Cow position: chr21:11027443-11027115 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 215
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 87

Conread position: 198-527
Cow position: chr21:10816933-10817280 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 223
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 198-527
Cow position: chr21:17875281-17874944 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 119

Conread position: 198-528
Cow position: chr21:9477073-9477411 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 229
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 130

Conread position: 198-528
Cow position: chr21:12916515-12916171 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 227
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 139

Conread position: 198-528
Cow position: chr21:16914686-16915028 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 226
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 37, 100

Conread position: 198-528
Cow position: chr21:23980271-23979932 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 130

Conread position: 198-528
Cow position: chr21:30222256-30222589 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 235
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 42, 9

Conread position: 198-528
Cow position: chr21:30236906-30236595 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 113

Conread position: 199-526
Cow position: chr21:41198495-41198152 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 221
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 332

Conread position: 199-528
Cow position: chr21:10561672-10561338 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 134

Conread position: 201-521
Cow position: chr21:9036209-9036541 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 120

Conread position: 201-525
Cow position: chr21:31253457-31253777 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 218
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 113

Conread position: 203-528
Cow position: chr21:44214040-44214358 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 195

Conread position: 205-399
Cow position: chr21:37014485-37014288 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 94

Conread position: 206-528
Cow position: chr21:46956-47294 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 207-430
Cow position: chr21:40432368-40432594 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 116

Conread position: 207-505
Cow position: chr21:10979021-10978722 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 199
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 27, 111

Conread position: 210-528
Cow position: chr21:17890230-17890550 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 99

Conread position: 211-473
Cow position: chr21:27429390-27429646 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 109, 50

Conread position: 211-518
Cow position: chr21:36909858-36910167 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 23, 113

Conread position: 212-502
Cow position: chr21:4280747-4280454 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 59

Conread position: 212-528
Cow position: chr21:7394304-7394616 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 174

Conread position: 212-528
Cow position: chr21:48527338-48527663 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 211
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 108

Conread position: 213-528
Cow position: chr21:47719373-47719057 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 96, 53

Conread position: 219-528
Cow position: chr21:18060018-18059712 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 105, 14

Conread position: 222-427
Cow position: chr21:46140983-46141194 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 91

Conread position: 222-524
Cow position: chr21:10292432-10292737 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 200
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 63, 97

Conread position: 226-528
Cow position: chr21:40266069-40266371 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 7

Conread position: 232-492
Cow position: chr21:297703-297952 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 34

Conread position: 232-509
Cow position: chr21:16569851-16570123 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 95

Conread position: 232-513
Cow position: chr21:41522457-41522176 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 76

Conread position: 232-527
Cow position: chr21:24343312-24343019 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 187
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 210, 84

Conread position: 233-499
Cow position: chr21:47009285-47009029 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 44, 60

Conread position: 233-528
Cow position: chr21:1511242-1511533 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 147

Conread position: 233-528
Cow position: chr21:16152387-16152687 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 47, 238

Conread position: 233-528
Cow position: chr21:28237759-28237452 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 44, 19

Conread position: 235-432
Cow position: chr21:20418731-20418531 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 235-475
Cow position: chr21:3400875-3400635 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 40

Conread position: 235-506
Cow position: chr21:34049926-34049661 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 61

Conread position: 235-515
Cow position: chr21:9698130-9697844 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 235-525
Cow position: chr21:18155614-18155320 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 194
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 50, 257

Conread position: 235-525
Cow position: chr21:19060134-19059847 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 47, 81

Conread position: 235-527
Cow position: chr21:23568174-23568471 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 61

Conread position: 235-527
Cow position: chr21:38728119-38728402 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 193
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 202, 38

Conread position: 235-528
Cow position: chr21:868972-868672 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 59

Conread position: 235-528
Cow position: chr21:10410173-10410470 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 235-528
Cow position: chr21:20152907-20153204 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 235-528
Cow position: chr21:21907476-21907194 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 48, 119

Conread position: 235-528
Cow position: chr21:47363785-47363477 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 48, 272

Conread position: 235-528
Cow position: chr21:47714050-47713760 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 48, 30

Conread position: 236-506
Cow position: chr21:4905012-4904739 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 76

Conread position: 236-515
Cow position: chr21:7377975-7377689 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 236-528
Cow position: chr21:11779575-11779291 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 47, 60

Conread position: 237-528
Cow position: chr21:33580376-33580658 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 67

Conread position: 237-528
Cow position: chr21:41140762-41140468 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 46, 80

Conread position: 238-528
Cow position: chr21:8349284-8349569 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 145

Conread position: 238-528
Cow position: chr21:22014143-22014438 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 68, 251

Conread position: 239-528
Cow position: chr21:742245-742521 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 22

Conread position: 242-454
Cow position: chr21:471637-471850 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 41, 83

Conread position: 244-525
Cow position: chr21:10883962-10883674 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 183
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 245-528
Cow position: chr21:10657139-10656854 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 183
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 65

Conread position: 250-488
Cow position: chr21:31159370-31159605 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 76

Conread position: 252-525
Cow position: chr21:20165611-20165884 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 75

Conread position: 252-528
Cow position: chr21:22850889-22851162 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 100

Conread position: 254-528
Cow position: chr21:10147960-10148246 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 188
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 208

Conread position: 256-478
Cow position: chr21:10538276-10538055 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 182, 23

Conread position: 256-528
Cow position: chr21:8426421-8426690 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 10

Conread position: 256-528
Cow position: chr21:8546044-8545773 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 10, 19

Conread position: 256-528
Cow position: chr21:38720226-38720496 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 28, 52

Conread position: 257-528
Cow position: chr21:28030263-28030526 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 28, 134

Conread position: 261-528
Cow position: chr21:46599339-46599605 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 186

Conread position: 262-528
Cow position: chr21:13656655-13656387 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 23, 44

Conread position: 265-524
Cow position: chr21:829227-828967 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 50, 14

Conread position: 273-528
Cow position: chr21:71577-71833 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 42, 152

Conread position: 282-498
Cow position: chr21:7768435-7768652 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 186

Conread position: 282-525
Cow position: chr21:13588763-13589006 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 31, 95

Conread position: 282-528
Cow position: chr21:12739080-12739335 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 142

Conread position: 282-528
Cow position: chr21:36508242-36508477 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 155, 35

Conread position: 282-528
Cow position: chr21:44724364-44724129 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 284-512
Cow position: chr21:36696087-36695856 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 153, 0

Conread position: 284-522
Cow position: chr21:37640560-37640807 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 40

Conread position: 284-528
Cow position: chr21:8431099-8430850 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 20

Conread position: 284-528
Cow position: chr21:8950183-8950440 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 284-528
Cow position: chr21:12104367-12104600 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 154

Conread position: 284-528
Cow position: chr21:41287792-41287549 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 182

Conread position: 293-515
Cow position: chr21:20318528-20318752 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 144, 23

Conread position: 301-528
Cow position: chr21:31279278-31279500 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 302-528
Cow position: chr21:28907523-28907302 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 109, 82

Conread position: 304-525
Cow position: chr21:19868931-19868718 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 8

Conread position: 310-478
Cow position: chr21:19360147-19359976 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 311-528
Cow position: chr21:20163738-20163954 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 121, 144

Conread position: 313-528
Cow position: chr21:37928679-37928898 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 203

Conread position: 314-525
Cow position: chr21:17155918-17155704 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 28

Conread position: 316-515
Cow position: chr21:49276170-49276371 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 136
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 121, 13

Conread position: 317-458
Cow position: chr21:9334524-9334668 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 120, 71

Conread position: 317-526
Cow position: chr21:9504903-9505114 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 120, 8

Conread position: 317-526
Cow position: chr21:17842961-17842750 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 143
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 120, 108

Conread position: 317-528
Cow position: chr21:9278555-9278775 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 318-528
Cow position: chr21:2537102-2536889 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 119, 0

Conread position: 319-512
Cow position: chr21:10009785-10009583 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 43

Conread position: 319-528
Cow position: chr21:20213739-20213524 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 118, 135

Conread position: 320-528
Cow position: chr21:12310516-12310720 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 117, 93

Conread position: 320-528
Cow position: chr21:13580452-13580662 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 26

Conread position: 320-528
Cow position: chr21:26018418-26018628 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 117, 93

Conread position: 321-478
Cow position: chr21:36682365-36682525 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 321-479
Cow position: chr21:11057838-11057680 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 111, 53

Conread position: 321-522
Cow position: chr21:22005869-22005659 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 65

Conread position: 321-524
Cow position: chr21:11174279-11174487 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 140
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 321-524
Cow position: chr21:11625783-11625989 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 73, 59

Conread position: 321-525
Cow position: chr21:27677522-27677727 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 116, 56

Conread position: 321-527
Cow position: chr21:8713919-8713711 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 32

Conread position: 321-527
Cow position: chr21:19561528-19561318 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 321-528
Cow position: chr21:7066341-7066138 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 116, 67

Conread position: 321-528
Cow position: chr21:13842529-13842740 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 321-528
Cow position: chr21:16498559-16498762 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 114, 57

Conread position: 321-528
Cow position: chr21:21615822-21616023 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 28

Conread position: 321-528
Cow position: chr21:24266525-24266314 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 116, 21

Conread position: 321-528
Cow position: chr21:29658316-29658521 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 321-528
Cow position: chr21:30980537-30980312 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 111, 67

Conread position: 321-528
Cow position: chr21:39393788-39393996 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 111, 145

Conread position: 321-528
Cow position: chr21:41610207-41610426 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 321-528
Cow position: chr21:42328625-42328414 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 321-528
Cow position: chr21:46809731-46809517 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 177

Conread position: 322-528
Cow position: chr21:6851213-6851412 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 26

Conread position: 322-528
Cow position: chr21:19240832-19240631 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 112, 124

Conread position: 323-521
Cow position: chr21:7221298-7221108 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 180, 111

Conread position: 323-522
Cow position: chr21:31652430-31652628 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 114, 41

Conread position: 323-527
Cow position: chr21:16604275-16604068 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 323-527
Cow position: chr21:17252936-17252731 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 111, 51

Conread position: 323-528
Cow position: chr21:24875394-24875599 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 58, 138

Conread position: 324-478
Cow position: chr21:5342051-5341893 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 324-488
Cow position: chr21:13225758-13225925 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 327-517
Cow position: chr21:18341264-18341458 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 328-528
Cow position: chr21:40475546-40475748 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 109, 30

Conread position: 329-527
Cow position: chr21:39319362-39319160 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 329-528
Cow position: chr21:30938624-30938419 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 155

Conread position: 330-506
Cow position: chr21:30243632-30243460 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 21

Conread position: 331-527
Cow position: chr21:3415704-3415903 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 106, 124

Conread position: 331-527
Cow position: chr21:17519071-17519274 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 332-519
Cow position: chr21:6153853-6154041 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 105, 10

Conread position: 334-518
Cow position: chr21:15012492-15012671 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 125

Conread position: 335-520
Cow position: chr21:19148164-19148355 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 126, 102

Conread position: 335-528
Cow position: chr21:25012136-25012325 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 104, 128

Conread position: 335-528
Cow position: chr21:40820799-40820604 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 336-528
Cow position: chr21:11182609-11182796 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 9

Conread position: 336-528
Cow position: chr21:41040999-41041195 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 101, 115

Conread position: 338-527
Cow position: chr21:8506488-8506301 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 94, 7

Conread position: 338-527
Cow position: chr21:8509376-8509189 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 94, 7

Conread position: 338-528
Cow position: chr21:17531186-17531382 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 339-509
Cow position: chr21:6736131-6735965 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 121

Conread position: 339-528
Cow position: chr21:19161770-19161962 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 340-528
Cow position: chr21:31659088-31658907 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 97, 38

Conread position: 340-528
Cow position: chr21:48482469-48482283 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 29

Conread position: 341-528
Cow position: chr21:6584078-6583893 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 94, 74

Conread position: 342-528
Cow position: chr21:5218763-5218955 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 44, 124

Conread position: 343-526
Cow position: chr21:22211315-22211501 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 345-528
Cow position: chr21:29418634-29418818 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 92, 28

Conread position: 347-519
Cow position: chr21:27409666-27409497 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 81

Conread position: 347-528
Cow position: chr21:38482449-38482629 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 90, 21

Conread position: 347-528
Cow position: chr21:43316829-43316645 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 348-528
Cow position: chr21:26828904-26828724 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 88, 36

Conread position: 349-526
Cow position: chr21:41737976-41738153 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 113

Conread position: 350-528
Cow position: chr21:11743435-11743246 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 350-528
Cow position: chr21:42017534-42017354 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 86, 154

Conread position: 351-528
Cow position: chr21:14745839-14746019 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 353-476
Cow position: chr21:42131283-42131157 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 353-499
Cow position: chr21:9346494-9346644 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 353-528
Cow position: chr21:646245-646068 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 26

Conread position: 353-528
Cow position: chr21:745247-745417 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 66

Conread position: 353-528
Cow position: chr21:4108847-4109024 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 134

Conread position: 353-528
Cow position: chr21:5214420-5214599 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 353-528
Cow position: chr21:8986094-8986273 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 28

Conread position: 353-528
Cow position: chr21:12348837-12349015 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 353-528
Cow position: chr21:18783397-18783219 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 78, 115

Conread position: 354-528
Cow position: chr21:32648116-32647939 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 355-512
Cow position: chr21:12640544-12640704 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 356-528
Cow position: chr21:24350927-24351098 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 45

Conread position: 361-527
Cow position: chr21:7539448-7539279 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 361-528
Cow position: chr21:15271357-15271192 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 76, 99

Conread position: 361-528
Cow position: chr21:15305219-15305048 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 121

Conread position: 363-526
Cow position: chr21:27744107-27744274 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 89

Conread position: 363-528
Cow position: chr21:11006689-11006521 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 363-528
Cow position: chr21:16796933-16797099 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 157

Conread position: 363-528
Cow position: chr21:30970017-30970182 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 74, 96

Conread position: 370-500
Cow position: chr21:13134690-13134822 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 67, 18

Conread position: 370-517
Cow position: chr21:3177936-3178084 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 67, 82

Conread position: 370-518
Cow position: chr21:1464432-1464583 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 370-524
Cow position: chr21:11353149-11353306 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 370-526
Cow position: chr21:27567983-27568139 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 67, 99

Conread position: 370-528
Cow position: chr21:3135780-3135621 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 144

Conread position: 371-527
Cow position: chr21:6291836-6291995 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 371-528
Cow position: chr21:28882271-28882430 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 91

Conread position: 373-528
Cow position: chr21:40930383-40930229 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 61, 95

Conread position: 376-528
Cow position: chr21:6041879-6042036 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 379-528
Cow position: chr21:18056031-18055882 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 81

Conread position: 379-528
Cow position: chr21:32536494-32536638 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 87

Conread position: 380-528
Cow position: chr21:37495847-37495697 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 21, 85

Conread position: 380-528
Cow position: chr21:44732944-44732796 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 9

Conread position: 384-527
Cow position: chr21:5344981-5345127 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 388-527
Cow position: chr21:7424907-7424767 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 49, 79

Conread position: 388-528
Cow position: chr21:40089661-40089517 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 389-528
Cow position: chr21:31258574-31258716 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 393-528
Cow position: chr21:16120049-16119915 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 77

Conread position: 394-527
Cow position: chr21:19340119-19339984 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 74

Conread position: 396-528
Cow position: chr21:48205106-48204971 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 408-528
Cow position: chr21:34209889-34209767 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 99

Show alignments to all cow chromosomes.