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Cow genome map

           
Conread name:
           
Ss1.1-rmgp028_b8.5
        

               
Conread position:
               
1-97
               

               
Cow position:
               
chr29:43517090-43516995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-109
               

               
Cow position:
               
chr29:5109647-5109540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-115
               

               
Cow position:
               
chr29:6333180-6333293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-115
               

               
Cow position:
               
chr29:21427950-21427835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-116
               

               
Cow position:
               
chr29:34774230-34774114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-117
               

               
Cow position:
               
chr29:6334419-6334534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr29:15902658-15902541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr29:29565474-29565355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr29:35738871-35738752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-121
               

               
Cow position:
               
chr29:14500706-14500827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr29:5963345-5963467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-123
               

               
Cow position:
               
chr29:26915812-26915935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-129
               

               
Cow position:
               
chr29:27702941-27703070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-131
               

               
Cow position:
               
chr29:3574733-3574603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
100, 60
               

               
Conread position:
               
1-131
               

               
Cow position:
               
chr29:19254510-19254385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-133
               

               
Cow position:
               
chr29:23980593-23980726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr29:4519600-4519734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr29:11563171-11563035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr29:13101774-13101906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr29:42253878-42253743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr29:19891428-19891561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
100, 86
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr29:39213984-39213845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr29:41183106-41182965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr29:18772972-18772819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 141
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr29:28503726-28503884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr29:32644548-32644708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
100, 92
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr29:1021905-1022079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 23
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr29:12451018-12451175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr29:27873047-27873215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr29:24420508-24420332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr29:36209561-36209732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
100, 117
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr29:28506727-28506896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
100, 34
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr29:23240145-23240330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr29:3460454-3460642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr29:16035532-16035342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr29:24345831-24345642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr29:18963376-18963563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
100, 87
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr29:2308913-2309107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
97, 126
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr29:2401220-2401416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr29:11334863-11334667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr29:17041283-17041475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
100, 87
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr29:17077871-17078069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
100, 60
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr29:18072571-18072758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
131, 88
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr29:18724122-18723927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr29:21665608-21665799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
135, 88
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr29:26633658-26633462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr29:12189504-12189310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 145
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr29:19398816-19399013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr29:24659467-24659271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
100, 87
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr29:28665434-28665629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
73, 88
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr29:29530696-29530892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 46
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:43860-43662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:292353-292551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:406631-406434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
40, 45
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:457413-457216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:756770-756572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:1743365-1743552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 122
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:2484928-2485126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:2694567-2694765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:3972915-3972719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:4611226-4611424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:4620810-4621008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:6455511-6455709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:7041200-7041008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
100, 60
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:7290541-7290724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:7427277-7427079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:7560768-7560570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:7865929-7865732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:8125960-8125764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
100, 136
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:8623370-8623177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:8935118-8935316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
86, 164
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:9717285-9717479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 155
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:9977428-9977230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
100, 141
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:10643262-10643064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:10819849-10819654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
130, 97
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:11697081-11697279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:12571070-12571268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:12610962-12611160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:13017757-13017559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:13590078-13589881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 170
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:14888754-14888951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
100, 157
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:15289378-15289571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
101, 38
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:15570400-15570598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:15576425-15576227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:15965688-15965490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:16097680-16097490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
100, 70
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:16348075-16348271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 93
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:17795053-17795251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:19514473-19514275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:21227841-21228039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:21231216-21231016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:22339586-22339382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:24728435-24728237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:25926921-25926723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:26449998-26449800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:27588324-27588516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
101, 70
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:31185241-31185438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 72
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:32942865-32943061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
100, 69
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:34530070-34530271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:34552085-34552283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:38271873-38272071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:38349495-38349298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 170
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:38581602-38581798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 149
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:38910371-38910173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:39075570-39075372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:40014067-40013874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 124
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:40621299-40621100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:40656321-40656524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:42406300-42406492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
101, 11
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:43328271-43328469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr29:43692590-43692788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr29:606782-606582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr29:686558-686359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr29:6771619-6771828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 53
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr29:8110225-8110030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
133, 97
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr29:8190846-8190629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr29:10225393-10225201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr29:10674647-10674845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
100, 146
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr29:13107971-13108162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
100, 137
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr29:2415174-2414983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 75
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr29:7666397-7666197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 131
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr29:7811332-7811132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
86, 97
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr29:19792634-19792447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
128, 99
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr29:26160964-26160766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
135, 97
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr29:30433314-30433513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
101, 60
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr29:13848302-13848116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
136, 29
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr29:4875271-4875065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr29:3539621-3539403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
119, 170
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr29:3282330-3282565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
100, 225
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr29:8588871-8588605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr29:5786561-5786825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
100, 127
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr29:9332777-9333051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr29:26346270-26346538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 31
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr29:18748948-18748661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 93
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr29:35281136-35281492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 136
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr29:4327128-4327501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
96, 136
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr29:11696173-11696539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
135, 77
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr29:44902069-44901684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
99, 160
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr29:3704565-3704140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr29:18212343-18211939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr29:26771059-26771501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 359
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr29:35484878-35485314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 43
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr29:17460-17037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr29:26130426-26130850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 79
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr29:1307230-1306780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr29:15828589-15828160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 199
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr29:20462984-20462525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 249
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr29:32290235-32290697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr29:40498014-40497561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
100, 201
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr29:35076996-35077453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 203
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr29:39567319-39567792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 333
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr29:19428306-19428774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 88
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr29:43495703-43496154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
174, 51
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr29:22935920-22936386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr29:32963173-32963652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
94, 352
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr29:13127474-13127000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 19
               

               
Conread position:
               
1-471
               

               
Cow position:
               
chr29:15738711-15738213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 153
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr29:12309632-12310136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr29:17408966-17409468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 121
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr29:10156656-10156172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 186
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr29:25088368-25088876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 292
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr29:11365890-11366374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
176, 94
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr29:40337899-40337402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
55, 277
               

               
Conread position:
               
1-498
               

               
Cow position:
               
chr29:13639720-13639211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 99
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr29:28775815-28775310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr29:87380-86844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 74
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr29:26981136-26981643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
100, 75
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr29:465766-465223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 87
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr29:29056816-29057353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 171
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr29:961556-962083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 36
               

               
Conread position:
               
1-527
               

               
Cow position:
               
chr29:16609373-16609931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 76
               

               
Conread position:
               
1-527
               

               
Cow position:
               
chr29:27833620-27834168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 317
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr29:732259-732792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 88
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr29:2744639-2744087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 482
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr29:4480541-4479985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr29:19124993-19125512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 135
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr29:19761908-19762445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 87
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr29:24952320-24952869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 9
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr29:28197375-28196838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 303
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr29:31786311-31786856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 271
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr29:35291731-35292268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 281
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr29:35459126-35458587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 88
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr29:35502012-35501483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 93
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr29:41113212-41112708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
101, 170
               

               
Conread position:
               
2-99
               

               
Cow position:
               
chr29:23844404-23844501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-115
               

               
Cow position:
               
chr29:34298114-34298003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
99, 86
               

               
Conread position:
               
2-119
               

               
Cow position:
               
chr29:4218302-4218417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 86
               

               
Conread position:
               
2-119
               

               
Cow position:
               
chr29:8136612-8136497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr29:34734542-34734364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
2-195
               

               
Cow position:
               
chr29:13652925-13653119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chr29:12674775-12674972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
100, 169
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr29:13040919-13040645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
100, 42
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr29:16612318-16612056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
220, 99
               

               
Conread position:
               
2-376
               

               
Cow position:
               
chr29:6217921-6217525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
13, 243
               

               
Conread position:
               
2-432
               

               
Cow position:
               
chr29:5948153-5947721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 270
               

               
Conread position:
               
2-455
               

               
Cow position:
               
chr29:9911796-9912286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr29:13616023-13615540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
44, 170
               

               
Conread position:
               
2-467
               

               
Cow position:
               
chr29:26616102-26615593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr29:45005982-45005480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 134
               

               
Conread position:
               
2-521
               

               
Cow position:
               
chr29:21933492-21932946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 306
               

               
Conread position:
               
2-528
               

               
Cow position:
               
chr29:21197016-21196470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 294
               

               
Conread position:
               
2-528
               

               
Cow position:
               
chr29:28195885-28195351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr29:22949028-22948834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
3-197
               

               
Cow position:
               
chr29:5550636-5550831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
98, 42
               

               
Conread position:
               
4-197
               

               
Cow position:
               
chr29:28047554-28047360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr29:35286565-35286758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
178, 50
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr29:26559883-26559636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
8, 85
               

               
Conread position:
               
4-528
               

               
Cow position:
               
chr29:11398291-11397731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 144
               

               
Conread position:
               
5-119
               

               
Cow position:
               
chr29:42709138-42709023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
5-135
               

               
Cow position:
               
chr29:23263215-23263341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
5-165
               

               
Cow position:
               
chr29:10154902-10155059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr29:6150424-6150270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr29:5187148-5186971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
145, 89
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr29:37617792-37617967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
97, 82
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr29:4084709-4084885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 5
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chr29:28637424-28637245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
125, 83
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr29:22560328-22560140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
91, 82
               

               
Conread position:
               
5-194
               

               
Cow position:
               
chr29:29504714-29504525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr29:2837421-2837229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr29:7959886-7959686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr29:37719549-37719739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
96, 132
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr29:42821423-42821612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr29:13403301-13403495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr29:14116681-14116873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr29:15251719-15251913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr29:18781503-18781693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 130
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr29:23119740-23119550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
96, 130
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr29:25423462-25423655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
96, 84
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr29:26285391-26285204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
96, 79
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr29:29302388-29302196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
127, 96
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr29:2715774-2715974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr29:45208367-45208561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
96, 70
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr29:1612934-1612745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr29:40894578-40894769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr29:11915171-11915386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
111, 97
               

               
Conread position:
               
5-234
               

               
Cow position:
               
chr29:16302659-16302424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
97, 8
               

               
Conread position:
               
5-242
               

               
Cow position:
               
chr29:34535587-34535331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr29:629271-629523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr29:26519822-26519523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 45
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr29:27007757-27008074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
110, 5
               

               
Conread position:
               
5-314
               

               
Cow position:
               
chr29:27005522-27005837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
99, 215
               

               
Conread position:
               
5-362
               

               
Cow position:
               
chr29:16175634-16175258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 164
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr29:28883717-28884154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 331
               

               
Conread position:
               
5-431
               

               
Cow position:
               
chr29:6925655-6926089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 126
               

               
Conread position:
               
5-440
               

               
Cow position:
               
chr29:4524497-4524949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 54
               

               
Conread position:
               
5-455
               

               
Cow position:
               
chr29:41811937-41811479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 83
               

               
Conread position:
               
5-456
               

               
Cow position:
               
chr29:17607053-17607528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 254
               

               
Conread position:
               
5-483
               

               
Cow position:
               
chr29:29512493-29512002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
170, 28
               

               
Conread position:
               
5-499
               

               
Cow position:
               
chr29:6635741-6636230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 231
               

               
Conread position:
               
5-503
               

               
Cow position:
               
chr29:39329936-39329441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
97, 44
               

               
Conread position:
               
5-506
               

               
Cow position:
               
chr29:24623879-24624407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
5-512
               

               
Cow position:
               
chr29:19756085-19756606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 295
               

               
Conread position:
               
5-520
               

               
Cow position:
               
chr29:2188712-2188181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 270
               

               
Conread position:
               
5-525
               

               
Cow position:
               
chr29:4625356-4624818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 307
               

               
Conread position:
               
5-525
               

               
Cow position:
               
chr29:35434507-35435038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 220
               

               
Conread position:
               
5-527
               

               
Cow position:
               
chr29:36633197-36632679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 176
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr29:1933923-1933388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 254
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr29:4120490-4121038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 17
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr29:7956328-7955806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 59
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr29:26334748-26334207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
125, 85
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr29:27846143-27846666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
97, 84
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr29:35406148-35405608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 65
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr29:36530501-36531048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
5-528
               

               
Cow position:
               
chr29:40764034-40763514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
98, 82
               

               
Conread position:
               
6-108
               

               
Cow position:
               
chr29:26415652-26415753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-121
               

               
Cow position:
               
chr29:5952330-5952210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
6-124
               

               
Cow position:
               
chr29:37486029-37486148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-125
               

               
Cow position:
               
chr29:4164676-4164794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
6-136
               

               
Cow position:
               
chr29:13923949-13924081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-137
               

               
Cow position:
               
chr29:13586075-13586208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-137
               

               
Cow position:
               
chr29:32349671-32349538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-138
               

               
Cow position:
               
chr29:526966-526832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
6-138
               

               
Cow position:
               
chr29:13853703-13853837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-138
               

               
Cow position:
               
chr29:16694062-16694195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 64
               

               
Conread position:
               
6-138
               

               
Cow position:
               
chr29:18752104-18752238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-138
               

               
Cow position:
               
chr29:23448963-23448829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-139
               

               
Cow position:
               
chr29:6194351-6194216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
6-177
               

               
Cow position:
               
chr29:28656503-28656331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
6-177
               

               
Cow position:
               
chr29:40157615-40157788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-178
               

               
Cow position:
               
chr29:6774200-6774027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-180
               

               
Cow position:
               
chr29:9641792-9641968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-185
               

               
Cow position:
               
chr29:32378442-32378623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-187
               

               
Cow position:
               
chr29:561470-561653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-187
               

               
Cow position:
               
chr29:31765911-31766094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-189
               

               
Cow position:
               
chr29:23703203-23703020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
96, 7
               

               
Conread position:
               
6-195
               

               
Cow position:
               
chr29:649906-650103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-195
               

               
Cow position:
               
chr29:34805963-34805784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
136, 5
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:727600-727790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
95, 80
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:734900-734707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:1479321-1479514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:1688605-1688798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:1911773-1911580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:2374365-2374173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
95, 170
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:2402557-2402749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 108
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:2483604-2483411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:2521218-2521413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:2534306-2534499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:3330453-3330646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:4649082-4648889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:5138871-5139063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:5425987-5425794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:5935830-5936023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:6414152-6414345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:6879061-6878870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:7953700-7953893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:9861231-9861038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:10031782-10031589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:10122467-10122274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:10145606-10145413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:10200560-10200753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:11118841-11118648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:12898429-12898622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:13128279-13128086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:13623503-13623310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:13876550-13876357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:14569167-14569360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:14611116-14611309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:15116656-15116463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:15401118-15400925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:15755296-15755103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:15767755-15767562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:15808613-15808807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:15936624-15936432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:16065580-16065772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
95, 158
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:16067223-16067416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:16109996-16110189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:16785548-16785741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:18011442-18011635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:18300356-18300549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:18561159-18560966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:19386058-19386251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:19524270-19524077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:19925115-19924922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:20014417-20014224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:20213431-20213624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:20593602-20593794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
95, 151
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:21209804-21209997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:21237098-21237290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:21475319-21475512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:21619806-21619613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:22341383-22341576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:23763465-23763272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:24013372-24013565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:24616271-24616464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:24945347-24945154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:24982700-24982508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
106, 95
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:25824586-25824778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
95, 110
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:28579011-28579204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:30707910-30707717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:32292462-32292655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:32298595-32298788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:32317733-32317922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 34
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:32329389-32329196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:32353466-32353659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:32516364-32516556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
95, 52
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:32555876-32555685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
96, 82
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:32582048-32581851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:34293531-34293338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:34780115-34779924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 30
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:34865458-34865651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:35075585-35075392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:35264497-35264303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:35455331-35455138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:35735749-35735556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:37618805-37618998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:38261620-38261427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:38672222-38672028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:39047971-39048164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:40330410-40330603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:40618098-40617905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:42413805-42413998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr29:43499829-43499636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-199
               

               
Cow position:
               
chr29:21592341-21592532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
49, 167
               

               
Conread position:
               
6-200
               

               
Cow position:
               
chr29:45583169-45582978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
6-203
               

               
Cow position:
               
chr29:32308686-32308486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
6-220
               

               
Cow position:
               
chr29:28990583-28990803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
6-244
               

               
Cow position:
               
chr29:25775409-25775166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 178
               

               
Conread position:
               
6-249
               

               
Cow position:
               
chr29:15855430-15855672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
95, 130
               

               
Conread position:
               
6-249
               

               
Cow position:
               
chr29:26987202-26987447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
95, 195
               

               
Conread position:
               
6-249
               

               
Cow position:
               
chr29:36008032-36008277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
95, 201
               

               
Conread position:
               
6-250
               

               
Cow position:
               
chr29:16152448-16152701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
6-267
               

               
Cow position:
               
chr29:16382492-16382755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
95, 136
               

               
Conread position:
               
6-275
               

               
Cow position:
               
chr29:37268094-37267822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
94, 144
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr29:45820609-45820326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
96, 81
               

               
Conread position:
               
6-302
               

               
Cow position:
               
chr29:21528940-21529241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 82
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr29:17131979-17131559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 147
               

               
Conread position:
               
6-435
               

               
Cow position:
               
chr29:4201757-4202209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
94, 334
               

               
Conread position:
               
6-467
               

               
Cow position:
               
chr29:36216757-36217235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 90
               

               
Conread position:
               
6-469
               

               
Cow position:
               
chr29:15941000-15940512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 460
               

               
Conread position:
               
6-528
               

               
Cow position:
               
chr29:17109610-17110135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
6-528
               

               
Cow position:
               
chr29:23874095-23874644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 75
               

               
Conread position:
               
7-124
               

               
Cow position:
               
chr29:16185796-16185678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
7-159
               

               
Cow position:
               
chr29:27694068-27693918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
102, 49
               

               
Conread position:
               
7-187
               

               
Cow position:
               
chr29:43729709-43729889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr29:10451928-10451736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr29:11321708-11321523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
94, 68
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr29:16501524-16501717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr29:19857330-19857526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr29:20933345-20933536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 53
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr29:24121220-24121028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr29:45624621-45624436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
94, 49
               

               
Conread position:
               
7-199
               

               
Cow position:
               
chr29:45650699-45650511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
95, 50
               

               
Conread position:
               
7-200
               

               
Cow position:
               
chr29:29632298-29632103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
7-211
               

               
Cow position:
               
chr29:20308109-20308315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
7-218
               

               
Cow position:
               
chr29:30105982-30105770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr29:26289447-26289146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
7-422
               

               
Cow position:
               
chr29:17668145-17668562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 199
               

               
Conread position:
               
7-435
               

               
Cow position:
               
chr29:28868270-28868731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr29:9638673-9638220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 313
               

               
Conread position:
               
7-458
               

               
Cow position:
               
chr29:31926651-31926186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 164
               

               
Conread position:
               
7-474
               

               
Cow position:
               
chr29:18085214-18085704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 234
               

               
Conread position:
               
7-513
               

               
Cow position:
               
chr29:21443705-21443169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 366
               

               
Conread position:
               
7-525
               

               
Cow position:
               
chr29:10652977-10653501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
7, 278
               

               
Conread position:
               
7-528
               

               
Cow position:
               
chr29:3584486-3583934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
94, 320
               

               
Conread position:
               
8-155
               

               
Cow position:
               
chr29:14372633-14372485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
89, 6
               

               
Conread position:
               
8-182
               

               
Cow position:
               
chr29:8493144-8492970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
93, 158
               

               
Conread position:
               
8-195
               

               
Cow position:
               
chr29:41850179-41849986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
8-473
               

               
Cow position:
               
chr29:42771306-42771764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 93
               

               
Conread position:
               
10-126
               

               
Cow position:
               
chr29:40306358-40306241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-138
               

               
Cow position:
               
chr29:13903398-13903268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-165
               

               
Cow position:
               
chr29:43009470-43009311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
10-177
               

               
Cow position:
               
chr29:15257858-15258027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-182
               

               
Cow position:
               
chr29:31093687-31093513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
10-186
               

               
Cow position:
               
chr29:16184904-16184726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-187
               

               
Cow position:
               
chr29:20055286-20055465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-195
               

               
Cow position:
               
chr29:2103716-2103903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
37, 31
               

               
Conread position:
               
10-196
               

               
Cow position:
               
chr29:10267495-10267311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
91, 117
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr29:528648-528459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr29:903574-903763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr29:5238360-5238549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr29:5241270-5241459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr29:6935358-6935546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr29:11703665-11703854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr29:24260195-24260006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr29:32543992-32544181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr29:32808239-32808428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr29:34793692-34793505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
91, 138
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr29:37785544-37785348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr29:38229875-38230064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr29:42807851-42808039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 106
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr29:43327669-43327854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 45
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr29:45627205-45627392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
91, 79
               

               
Conread position:
               
10-199
               

               
Cow position:
               
chr29:6261678-6261489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
91, 110
               

               
Conread position:
               
10-200
               

               
Cow position:
               
chr29:25695671-25695479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-233
               

               
Cow position:
               
chr29:33520348-33520119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr29:7799458-7799696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
90, 196
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr29:24304216-24304457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
91, 191
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr29:24305076-24304835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
91, 191
               

               
Conread position:
               
10-435
               

               
Cow position:
               
chr29:26263497-26263924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 117
               

               
Conread position:
               
10-476
               

               
Cow position:
               
chr29:40096607-40097094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 125
               

               
Conread position:
               
10-499
               

               
Cow position:
               
chr29:34746012-34745504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 359
               

               
Conread position:
               
10-510
               

               
Cow position:
               
chr29:856761-856236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 297
               

               
Conread position:
               
10-515
               

               
Cow position:
               
chr29:32732976-32733464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 65
               

               
Conread position:
               
10-527
               

               
Cow position:
               
chr29:20674166-20673627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 218
               

               
Conread position:
               
10-528
               

               
Cow position:
               
chr29:32800065-32799521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 326
               

               
Conread position:
               
11-195
               

               
Cow position:
               
chr29:9864388-9864578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 132
               

               
Conread position:
               
11-513
               

               
Cow position:
               
chr29:29974688-29975206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
12-195
               

               
Cow position:
               
chr29:8968763-8968948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
12-197
               

               
Cow position:
               
chr29:8426970-8426783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
89, 149
               

               
Conread position:
               
13-176
               

               
Cow position:
               
chr29:8296181-8296344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
13-177
               

               
Cow position:
               
chr29:16168392-16168225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
13-190
               

               
Cow position:
               
chr29:36193023-36192844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
13-195
               

               
Cow position:
               
chr29:4221031-4221206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
120, 80
               

               
Conread position:
               
13-195
               

               
Cow position:
               
chr29:5636606-5636786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 85
               

               
Conread position:
               
13-195
               

               
Cow position:
               
chr29:16939652-16939836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
13-195
               

               
Cow position:
               
chr29:19596605-19596427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
50, 132
               

               
Conread position:
               
13-195
               

               
Cow position:
               
chr29:36242987-36243169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
13-195
               

               
Cow position:
               
chr29:38214998-38214819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
13-197
               

               
Cow position:
               
chr29:16209504-16209318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
13-197
               

               
Cow position:
               
chr29:20255041-20255227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
13-197
               

               
Cow position:
               
chr29:28689255-28689441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
13-197
               

               
Cow position:
               
chr29:29066072-29066257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
88, 57
               

               
Conread position:
               
13-197
               

               
Cow position:
               
chr29:38410074-38410260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
13-200
               

               
Cow position:
               
chr29:24669592-24669781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
13-203
               

               
Cow position:
               
chr29:20429324-20429136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 75
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr29:2481687-2481396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 129
               

               
Conread position:
               
13-313
               

               
Cow position:
               
chr29:3822509-3822805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
162, 29
               

               
Conread position:
               
13-358
               

               
Cow position:
               
chr29:11684650-11685018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 267
               

               
Conread position:
               
13-395
               

               
Cow position:
               
chr29:6775340-6774949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
89, 45
               

               
Conread position:
               
13-398
               

               
Cow position:
               
chr29:11136243-11135845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
89, 159
               

               
Conread position:
               
13-518
               

               
Cow position:
               
chr29:5892495-5893021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
13-527
               

               
Cow position:
               
chr29:36586224-36586750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
13-528
               

               
Cow position:
               
chr29:26778536-26779058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 76
               

               
Conread position:
               
14-195
               

               
Cow position:
               
chr29:4537712-4537896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
87, 158
               

               
Conread position:
               
14-195
               

               
Cow position:
               
chr29:26017865-26017685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
87, 143
               

               
Conread position:
               
14-195
               

               
Cow position:
               
chr29:39331930-39331751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
87, 124
               

               
Conread position:
               
14-197
               

               
Cow position:
               
chr29:27928018-27927833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
14-256
               

               
Cow position:
               
chr29:19930999-19931243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 42
               

               
Conread position:
               
14-343
               

               
Cow position:
               
chr29:19508593-19508950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 41
               

               
Conread position:
               
15-178
               

               
Cow position:
               
chr29:38247098-38246934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
15-194
               

               
Cow position:
               
chr29:34390036-34389855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
15-195
               

               
Cow position:
               
chr29:133837-134022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
15-195
               

               
Cow position:
               
chr29:7750227-7750047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
87, 121
               

               
Conread position:
               
15-195
               

               
Cow position:
               
chr29:30028784-30028602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
15-195
               

               
Cow position:
               
chr29:40464716-40464893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
120, 45
               

               
Conread position:
               
15-196
               

               
Cow position:
               
chr29:44598176-44597993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 158
               

               
Conread position:
               
15-197
               

               
Cow position:
               
chr29:19619392-19619208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
15-197
               

               
Cow position:
               
chr29:28621623-28621449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
87, 92
               

               
Conread position:
               
15-268
               

               
Cow position:
               
chr29:18400274-18400533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 213
               

               
Conread position:
               
15-304
               

               
Cow position:
               
chr29:1956439-1956151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
87, 32
               

               
Conread position:
               
15-376
               

               
Cow position:
               
chr29:12005117-12004733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 330
               

               
Conread position:
               
15-455
               

               
Cow position:
               
chr29:6293817-6293369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 74
               

               
Conread position:
               
15-515
               

               
Cow position:
               
chr29:29589267-29588756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 73
               

               
Conread position:
               
15-525
               

               
Cow position:
               
chr29:15944216-15944740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 290
               

               
Conread position:
               
16-197
               

               
Cow position:
               
chr29:39425133-39425316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
16-304
               

               
Cow position:
               
chr29:29477384-29477076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
85, 221
               

               
Conread position:
               
17-195
               

               
Cow position:
               
chr29:20244935-20245111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
84, 118
               

               
Conread position:
               
17-197
               

               
Cow position:
               
chr29:8164217-8164030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
18-199
               

               
Cow position:
               
chr29:40903069-40902887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
84, 124
               

               
Conread position:
               
19-290
               

               
Cow position:
               
chr29:18338894-18338622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
112, 181
               

               
Conread position:
               
20-170
               

               
Cow position:
               
chr29:32870889-32871040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 89
               

               
Conread position:
               
20-195
               

               
Cow position:
               
chr29:2298450-2298282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
20-195
               

               
Cow position:
               
chr29:5977469-5977293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
20-197
               

               
Cow position:
               
chr29:37470922-37470737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
20-321
               

               
Cow position:
               
chr29:29550975-29551291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
114, 67
               

               
Conread position:
               
20-497
               

               
Cow position:
               
chr29:1325093-1325589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 123
               

               
Conread position:
               
22-189
               

               
Cow position:
               
chr29:31899366-31899200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
22-200
               

               
Cow position:
               
chr29:35630759-35630581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
79, 66
               

               
Conread position:
               
23-197
               

               
Cow position:
               
chr29:21640068-21639892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
23-197
               

               
Cow position:
               
chr29:25958045-25957869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
23-197
               

               
Cow position:
               
chr29:44233294-44233118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
23-296
               

               
Cow position:
               
chr29:15041860-15042125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
80, 5
               

               
Conread position:
               
23-306
               

               
Cow position:
               
chr29:23541607-23541328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 184
               

               
Conread position:
               
23-309
               

               
Cow position:
               
chr29:12798587-12798882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 78
               

               
Conread position:
               
23-313
               

               
Cow position:
               
chr29:2136444-2136145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
77, 258
               

               
Conread position:
               
23-375
               

               
Cow position:
               
chr29:42848885-42849253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
107, 64
               

               
Conread position:
               
23-518
               

               
Cow position:
               
chr29:40583452-40583960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 310
               

               
Conread position:
               
23-528
               

               
Cow position:
               
chr29:40117226-40117747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 115
               

               
Conread position:
               
24-195
               

               
Cow position:
               
chr29:38858886-38859060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
24-329
               

               
Cow position:
               
chr29:9686353-9686021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
77, 320
               

               
Conread position:
               
24-433
               

               
Cow position:
               
chr29:17543106-17543526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
77, 277
               

               
Conread position:
               
25-194
               

               
Cow position:
               
chr29:26415758-26415929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
25-195
               

               
Cow position:
               
chr29:16057150-16056973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
25-196
               

               
Cow position:
               
chr29:26290924-26290753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
76, 63
               

               
Conread position:
               
25-197
               

               
Cow position:
               
chr29:5897072-5896898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
25-197
               

               
Cow position:
               
chr29:26335721-26335547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
25-217
               

               
Cow position:
               
chr29:35300385-35300578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
76, 176
               

               
Conread position:
               
26-192
               

               
Cow position:
               
chr29:41347209-41347373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 50
               

               
Conread position:
               
26-195
               

               
Cow position:
               
chr29:7930401-7930232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 38
               

               
Conread position:
               
27-197
               

               
Cow position:
               
chr29:17773600-17773772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
28-195
               

               
Cow position:
               
chr29:7697773-7697942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
77, 70
               

               
Conread position:
               
28-197
               

               
Cow position:
               
chr29:6014757-6014932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 144
               

               
Conread position:
               
28-199
               

               
Cow position:
               
chr29:36356514-36356684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
28-492
               

               
Cow position:
               
chr29:40892054-40891558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
71, 194
               

               
Conread position:
               
28-528
               

               
Cow position:
               
chr29:20626237-20626752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 273
               

               
Conread position:
               
29-196
               

               
Cow position:
               
chr29:30696003-30695832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
30-197
               

               
Cow position:
               
chr29:1582963-1582796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
30-197
               

               
Cow position:
               
chr29:8415596-8415766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
71, 129
               

               
Conread position:
               
30-315
               

               
Cow position:
               
chr29:36037374-36037669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 142
               

               
Conread position:
               
30-528
               

               
Cow position:
               
chr29:9709361-9709875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 299
               

               
Conread position:
               
32-162
               

               
Cow position:
               
chr29:27000450-27000581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
69, 82
               

               
Conread position:
               
32-518
               

               
Cow position:
               
chr29:10058863-10058368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 259
               

               
Conread position:
               
33-197
               

               
Cow position:
               
chr29:28696502-28696338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
33-433
               

               
Cow position:
               
chr29:7408225-7407818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
21, 169
               

               
Conread position:
               
34-309
               

               
Cow position:
               
chr29:27811561-27811836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
69, 84
               

               
Conread position:
               
34-314
               

               
Cow position:
               
chr29:29547915-29548209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
154, 29
               

               
Conread position:
               
36-195
               

               
Cow position:
               
chr29:12901436-12901284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
37-170
               

               
Cow position:
               
chr29:32176430-32176560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
65, 38
               

               
Conread position:
               
40-376
               

               
Cow position:
               
chr29:14037042-14036693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
6, 215
               

               
Conread position:
               
41-141
               

               
Cow position:
               
chr29:10158655-10158554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
41-197
               

               
Cow position:
               
chr29:20616608-20616450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
41-432
               

               
Cow position:
               
chr29:19907033-19907440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
41-435
               

               
Cow position:
               
chr29:8630399-8630001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
41-528
               

               
Cow position:
               
chr29:10838624-10839121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
42-197
               

               
Cow position:
               
chr29:13391195-13391038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
42-197
               

               
Cow position:
               
chr29:18603873-18603716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
42-197
               

               
Cow position:
               
chr29:22021111-22020954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
42-197
               

               
Cow position:
               
chr29:27976568-27976412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
42-327
               

               
Cow position:
               
chr29:8645393-8645680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
42-367
               

               
Cow position:
               
chr29:20178456-20178114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
60, 110
               

               
Conread position:
               
42-367
               

               
Cow position:
               
chr29:28273711-28273366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 29
               

               
Conread position:
               
44-197
               

               
Cow position:
               
chr29:1445700-1445855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
45-197
               

               
Cow position:
               
chr29:14207345-14207191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
45-528
               

               
Cow position:
               
chr29:16657368-16657873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 158
               

               
Conread position:
               
47-197
               

               
Cow position:
               
chr29:3782805-3782653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
47-203
               

               
Cow position:
               
chr29:32521542-32521704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
55, 155
               

               
Conread position:
               
47-475
               

               
Cow position:
               
chr29:13372345-13372794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 51
               

               
Conread position:
               
50-411
               

               
Cow position:
               
chr29:2071886-2071507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 278
               

               
Conread position:
               
51-384
               

               
Cow position:
               
chr29:4328117-4328459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 103
               

               
Conread position:
               
52-197
               

               
Cow position:
               
chr29:2490577-2490724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
52-197
               

               
Cow position:
               
chr29:21000322-21000470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 124
               

               
Conread position:
               
53-197
               

               
Cow position:
               
chr29:21478629-21478483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
56-197
               

               
Cow position:
               
chr29:39446465-39446322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
56-199
               

               
Cow position:
               
chr29:44310340-44310196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
57-523
               

               
Cow position:
               
chr29:10456863-10456403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 252
               

               
Conread position:
               
63-302
               

               
Cow position:
               
chr29:24197933-24197689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
63-363
               

               
Cow position:
               
chr29:26734728-26735045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 249
               

               
Conread position:
               
63-506
               

               
Cow position:
               
chr29:14112070-14112545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
64-194
               

               
Cow position:
               
chr29:27825940-27826073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
66-197
               

               
Cow position:
               
chr29:38760453-38760326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 33
               

               
Conread position:
               
67-512
               

               
Cow position:
               
chr29:45589886-45589434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
35, 222
               

               
Conread position:
               
72-502
               

               
Cow position:
               
chr29:37961268-37960816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
73-197
               

               
Cow position:
               
chr29:40960212-40960087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 8
               

               
Conread position:
               
74-195
               

               
Cow position:
               
chr29:4087574-4087453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
76-197
               

               
Cow position:
               
chr29:43252979-43252857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
77-200
               

               
Cow position:
               
chr29:36329187-36329313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
78-199
               

               
Cow position:
               
chr29:29171345-29171468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
78-331
               

               
Cow position:
               
chr29:3395823-3396092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
78-478
               

               
Cow position:
               
chr29:6844919-6844498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 255
               

               
Conread position:
               
78-528
               

               
Cow position:
               
chr29:22162547-22162082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 383
               

               
Conread position:
               
79-527
               

               
Cow position:
               
chr29:699898-699447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
79-528
               

               
Cow position:
               
chr29:39111594-39111142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
80-197
               

               
Cow position:
               
chr29:33392283-33392403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
83-199
               

               
Cow position:
               
chr29:45588760-45588640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
84-195
               

               
Cow position:
               
chr29:10296724-10296611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
84-512
               

               
Cow position:
               
chr29:18878784-18878313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 6
               

               
Conread position:
               
85-293
               

               
Cow position:
               
chr29:3502776-3502999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
85-528
               

               
Cow position:
               
chr29:5062848-5063325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
5, 186
               

               
Conread position:
               
86-197
               

               
Cow position:
               
chr29:479104-479217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
87-528
               

               
Cow position:
               
chr29:27816092-27816518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
15, 41
               

               
Conread position:
               
88-196
               

               
Cow position:
               
chr29:4002405-4002515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
89-528
               

               
Cow position:
               
chr29:42364293-42363837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
90-196
               

               
Cow position:
               
chr29:22720850-22720956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
90-527
               

               
Cow position:
               
chr29:14501316-14501776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
90-527
               

               
Cow position:
               
chr29:34360072-34359645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 108
               

               
Conread position:
               
91-332
               

               
Cow position:
               
chr29:35636147-35636413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 216
               

               
Conread position:
               
93-197
               

               
Cow position:
               
chr29:2263302-2263195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
94-469
               

               
Cow position:
               
chr29:12761694-12762081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
5, 9
               

               
Conread position:
               
98-528
               

               
Cow position:
               
chr29:29769615-29769172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 230
               

               
Conread position:
               
101-195
               

               
Cow position:
               
chr29:21265469-21265563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
101-197
               

               
Cow position:
               
chr29:5046540-5046443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
101-313
               

               
Cow position:
               
chr29:34736732-34736501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
101-435
               

               
Cow position:
               
chr29:2984621-2984978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
98, 35
               

               
Conread position:
               
101-453
               

               
Cow position:
               
chr29:94811-94465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
98, 35
               

               
Conread position:
               
101-473
               

               
Cow position:
               
chr29:19338713-19339130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
32, 108
               

               
Conread position:
               
101-475
               

               
Cow position:
               
chr29:25333719-25333330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 189
               

               
Conread position:
               
101-476
               

               
Cow position:
               
chr29:22175427-22175814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
101-527
               

               
Cow position:
               
chr29:12679888-12680339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 229
               

               
Conread position:
               
101-528
               

               
Cow position:
               
chr29:2644571-2644139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
101-528
               

               
Cow position:
               
chr29:17463045-17462597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
35, 188
               

               
Conread position:
               
101-528
               

               
Cow position:
               
chr29:22069013-22068559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
102-195
               

               
Cow position:
               
chr29:30227399-30227493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 74
               

               
Conread position:
               
102-528
               

               
Cow position:
               
chr29:41530585-41531033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
103-195
               

               
Cow position:
               
chr29:5919589-5919496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
103-197
               

               
Cow position:
               
chr29:41076292-41076197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
103-197
               

               
Cow position:
               
chr29:43516945-43516850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
103-509
               

               
Cow position:
               
chr29:4492301-4491886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
104-406
               

               
Cow position:
               
chr29:4647249-4646933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
78, 219
               

               
Conread position:
               
104-435
               

               
Cow position:
               
chr29:26329955-26330286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
104-528
               

               
Cow position:
               
chr29:31928716-31929168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
105-432
               

               
Cow position:
               
chr29:5099024-5098681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 199
               

               
Conread position:
               
106-435
               

               
Cow position:
               
chr29:26318933-26319253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
101, 31
               

               
Conread position:
               
107-195
               

               
Cow position:
               
chr29:1886937-1886847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
107-199
               

               
Cow position:
               
chr29:3237619-3237525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
107-199
               

               
Cow position:
               
chr29:38731365-38731457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
24, 84
               

               
Conread position:
               
107-303
               

               
Cow position:
               
chr29:21236856-21237072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
107-372
               

               
Cow position:
               
chr29:2522318-2522590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 130
               

               
Conread position:
               
107-466
               

               
Cow position:
               
chr29:37599464-37599098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
89, 192
               

               
Conread position:
               
107-506
               

               
Cow position:
               
chr29:109450-109840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 143
               

               
Conread position:
               
107-524
               

               
Cow position:
               
chr29:44236208-44236620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
117, 29
               

               
Conread position:
               
107-525
               

               
Cow position:
               
chr29:19389226-19389659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
24, 64
               

               
Conread position:
               
107-528
               

               
Cow position:
               
chr29:16195592-16196037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 186
               

               
Conread position:
               
107-528
               

               
Cow position:
               
chr29:27668902-27668472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
107-528
               

               
Cow position:
               
chr29:29475507-29475071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
65, 98
               

               
Conread position:
               
108-365
               

               
Cow position:
               
chr29:35738529-35738254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
28, 179
               

               
Conread position:
               
108-527
               

               
Cow position:
               
chr29:35677801-35677360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
109-528
               

               
Cow position:
               
chr29:34297823-34297389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 142
               

               
Conread position:
               
110-297
               

               
Cow position:
               
chr29:29312772-29312569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 179
               

               
Conread position:
               
110-469
               

               
Cow position:
               
chr29:18021932-18021557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
24, 137
               

               
Conread position:
               
110-515
               

               
Cow position:
               
chr29:28674943-28674533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
110-528
               

               
Cow position:
               
chr29:12784212-12783773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 221
               

               
Conread position:
               
111-524
               

               
Cow position:
               
chr29:8926715-8926268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 184
               

               
Conread position:
               
111-528
               

               
Cow position:
               
chr29:17222152-17222598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 216
               

               
Conread position:
               
111-528
               

               
Cow position:
               
chr29:22613179-22613603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
113-376
               

               
Cow position:
               
chr29:31594369-31594098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
114-335
               

               
Cow position:
               
chr29:585029-585262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 181
               

               
Conread position:
               
115-490
               

               
Cow position:
               
chr29:1556680-1557073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
16, 157
               

               
Conread position:
               
115-528
               

               
Cow position:
               
chr29:13028205-13028632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
117-478
               

               
Cow position:
               
chr29:40299257-40298886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
118-528
               

               
Cow position:
               
chr29:24292627-24293052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
119-435
               

               
Cow position:
               
chr29:23984212-23983867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
119-470
               

               
Cow position:
               
chr29:34773975-34773609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
64, 189
               

               
Conread position:
               
120-512
               

               
Cow position:
               
chr29:25737664-25737250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 366
               

               
Conread position:
               
120-528
               

               
Cow position:
               
chr29:44378665-44378225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
76, 289
               

               
Conread position:
               
121-455
               

               
Cow position:
               
chr29:10235361-10235027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
121-460
               

               
Cow position:
               
chr29:20903534-20903174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 184
               

               
Conread position:
               
123-528
               

               
Cow position:
               
chr29:38440021-38440439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 78
               

               
Conread position:
               
124-521
               

               
Cow position:
               
chr29:23578019-23577610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
7, 82
               

               
Conread position:
               
127-528
               

               
Cow position:
               
chr29:19949070-19949487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 127
               

               
Conread position:
               
128-528
               

               
Cow position:
               
chr29:23697740-23698152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
71, 204
               

               
Conread position:
               
128-528
               

               
Cow position:
               
chr29:34744855-34744449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 166
               

               
Conread position:
               
129-383
               

               
Cow position:
               
chr29:1395368-1395633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
129-438
               

               
Cow position:
               
chr29:868535-868866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
70, 201
               

               
Conread position:
               
130-489
               

               
Cow position:
               
chr29:24578640-24578994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
130-492
               

               
Cow position:
               
chr29:7966010-7966391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
130-527
               

               
Cow position:
               
chr29:21706611-21706216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
130-528
               

               
Cow position:
               
chr29:4520099-4520514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 271
               

               
Conread position:
               
130-528
               

               
Cow position:
               
chr29:16309514-16309903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
66, 177
               

               
Conread position:
               
130-528
               

               
Cow position:
               
chr29:22714964-22714528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
48, 251
               

               
Conread position:
               
131-469
               

               
Cow position:
               
chr29:6286393-6286036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
66, 196
               

               
Conread position:
               
133-527
               

               
Cow position:
               
chr29:19254056-19253648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
57, 183
               

               
Conread position:
               
137-452
               

               
Cow position:
               
chr29:1229379-1229715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 163
               

               
Conread position:
               
138-448
               

               
Cow position:
               
chr29:19821068-19821384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
56, 193
               

               
Conread position:
               
143-525
               

               
Cow position:
               
chr29:12025676-12025300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
143-528
               

               
Cow position:
               
chr29:23155027-23155417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
81, 56
               

               
Conread position:
               
146-453
               

               
Cow position:
               
chr29:463874-463543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 106
               

               
Conread position:
               
146-524
               

               
Cow position:
               
chr29:28739408-28739805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
154-528
               

               
Cow position:
               
chr29:6337450-6337833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
42, 277
               

               
Conread position:
               
173-458
               

               
Cow position:
               
chr29:27329714-27330004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
70, 40
               

               
Conread position:
               
176-475
               

               
Cow position:
               
chr29:27588749-27589054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
177-459
               

               
Cow position:
               
chr29:11646914-11647209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
181-528
               

               
Cow position:
               
chr29:38580809-38581174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
182-472
               

               
Cow position:
               
chr29:28166382-28166094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
58, 7
               

               
Conread position:
               
184-528
               

               
Cow position:
               
chr29:31943712-31944050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
187-528
               

               
Cow position:
               
chr29:2055895-2056242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
193-512
               

               
Cow position:
               
chr29:12900710-12900384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
43, 89
               

               
Conread position:
               
194-469
               

               
Cow position:
               
chr29:4085161-4085434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
44, 92
               

               
Conread position:
               
194-473
               

               
Cow position:
               
chr29:23244038-23243749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 161
               

               
Conread position:
               
194-475
               

               
Cow position:
               
chr29:24252080-24252362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 170
               

               
Conread position:
               
194-477
               

               
Cow position:
               
chr29:4334569-4334852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 92
               

               
Conread position:
               
194-479
               

               
Cow position:
               
chr29:32211214-32210936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
194-480
               

               
Cow position:
               
chr29:5186653-5186354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 83
               

               
Conread position:
               
194-496
               

               
Cow position:
               
chr29:22778336-22778028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
40, 202
               

               
Conread position:
               
194-499
               

               
Cow position:
               
chr29:31891681-31891383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
194-513
               

               
Cow position:
               
chr29:8669208-8669522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
41, 90
               

               
Conread position:
               
194-526
               

               
Cow position:
               
chr29:38581817-38582150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
41, 90
               

               
Conread position:
               
194-527
               

               
Cow position:
               
chr29:31674472-31674812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
194-527
               

               
Cow position:
               
chr29:43099900-43099568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr29:11433964-11434294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr29:22029097-22028779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
155, 79
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr29:25091954-25092286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 98
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr29:26275459-26275783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 97
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr29:31489163-31489506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
50, 123
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr29:36210004-36210332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 81
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr29:37618149-37618490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
43, 89
               

               
Conread position:
               
196-528
               

               
Cow position:
               
chr29:35084374-35084041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
198-478
               

               
Cow position:
               
chr29:1022139-1022429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 258
               

               
Conread position:
               
198-478
               

               
Cow position:
               
chr29:29314809-29314526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
42, 233
               

               
Conread position:
               
198-524
               

               
Cow position:
               
chr29:14838961-14838629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 250
               

               
Conread position:
               
198-528
               

               
Cow position:
               
chr29:22690069-22690409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
36, 104
               

               
Conread position:
               
199-519
               

               
Cow position:
               
chr29:3100411-3100092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
37, 112
               

               
Conread position:
               
199-525
               

               
Cow position:
               
chr29:28396535-28396876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 88
               

               
Conread position:
               
199-526
               

               
Cow position:
               
chr29:23844682-23845020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
67, 114
               

               
Conread position:
               
199-527
               

               
Cow position:
               
chr29:25814988-25814654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
200-525
               

               
Cow position:
               
chr29:28587305-28587623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
201-528
               

               
Cow position:
               
chr29:17296980-17297320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
205-458
               

               
Cow position:
               
chr29:40995031-40994777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
206-470
               

               
Cow position:
               
chr29:11054006-11053732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
28, 125
               

               
Conread position:
               
206-528
               

               
Cow position:
               
chr29:36220382-36220725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
30, 6
               

               
Conread position:
               
222-528
               

               
Cow position:
               
chr29:28735168-28734865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
63, 50
               

               
Conread position:
               
226-525
               

               
Cow position:
               
chr29:24045872-24046177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
232-527
               

               
Cow position:
               
chr29:34359095-34358797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
94, 79
               

               
Conread position:
               
233-423
               

               
Cow position:
               
chr29:11719850-11720043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
233-474
               

               
Cow position:
               
chr29:21941485-21941731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
233-527
               

               
Cow position:
               
chr29:20243923-20243622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
51, 46
               

               
Conread position:
               
233-528
               

               
Cow position:
               
chr29:3685625-3685339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
153, 10
               

               
Conread position:
               
233-528
               

               
Cow position:
               
chr29:25474806-25475115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
234-528
               

               
Cow position:
               
chr29:26017615-26017318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
235-419
               

               
Cow position:
               
chr29:29942842-29942655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
235-490
               

               
Cow position:
               
chr29:8176539-8176801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
235-516
               

               
Cow position:
               
chr29:29795497-29795210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
235-528
               

               
Cow position:
               
chr29:3825861-3826148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
50, 38
               

               
Conread position:
               
235-528
               

               
Cow position:
               
chr29:30440819-30441121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 199
               

               
Conread position:
               
236-476
               

               
Cow position:
               
chr29:27858683-27858919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 46
               

               
Conread position:
               
236-489
               

               
Cow position:
               
chr29:12626090-12625834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
44, 228
               

               
Conread position:
               
236-521
               

               
Cow position:
               
chr29:16272617-16272919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
236-528
               

               
Cow position:
               
chr29:5409251-5408960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
47, 58
               

               
Conread position:
               
237-512
               

               
Cow position:
               
chr29:23389666-23389397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
46, 144
               

               
Conread position:
               
237-522
               

               
Cow position:
               
chr29:7621677-7621382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
237-527
               

               
Cow position:
               
chr29:1007706-1007999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 119
               

               
Conread position:
               
237-528
               

               
Cow position:
               
chr29:11611729-11612029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
48, 90
               

               
Conread position:
               
238-518
               

               
Cow position:
               
chr29:5046543-5046828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
240-455
               

               
Cow position:
               
chr29:6015015-6015237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
45, 123
               

               
Conread position:
               
240-524
               

               
Cow position:
               
chr29:17168298-17168583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 144
               

               
Conread position:
               
240-528
               

               
Cow position:
               
chr29:5520612-5520302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 252
               

               
Conread position:
               
243-527
               

               
Cow position:
               
chr29:28814083-28813791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
245-528
               

               
Cow position:
               
chr29:38755031-38754756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
149, 16
               

               
Conread position:
               
253-476
               

               
Cow position:
               
chr29:2263091-2262863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
28, 131
               

               
Conread position:
               
256-516
               

               
Cow position:
               
chr29:30713800-30713547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
256-528
               

               
Cow position:
               
chr29:15947080-15947351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
181, 25
               

               
Conread position:
               
257-478
               

               
Cow position:
               
chr29:13867301-13867075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
258-479
               

               
Cow position:
               
chr29:22519219-22518990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 171
               

               
Conread position:
               
258-528
               

               
Cow position:
               
chr29:1614836-1615109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
259-528
               

               
Cow position:
               
chr29:42630033-42630299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
263-489
               

               
Cow position:
               
chr29:31813864-31814086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
263-528
               

               
Cow position:
               
chr29:20770259-20770526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
263-528
               

               
Cow position:
               
chr29:32894184-32894439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
270-527
               

               
Cow position:
               
chr29:36248958-36249219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
280-525
               

               
Cow position:
               
chr29:27926708-27926953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
10, 90
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr29:27911525-27911774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
10, 90
               

               
Conread position:
               
280-528
               

               
Cow position:
               
chr29:31092382-31092631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 91
               

               
Conread position:
               
281-528
               

               
Cow position:
               
chr29:23813103-23812866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
156, 30
               

               
Conread position:
               
282-458
               

               
Cow position:
               
chr29:23825604-23825787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
282-479
               

               
Cow position:
               
chr29:7103491-7103693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
282-515
               

               
Cow position:
               
chr29:38348095-38347858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
282-527
               

               
Cow position:
               
chr29:18450199-18449957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
282-528
               

               
Cow position:
               
chr29:20167358-20167605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
282-528
               

               
Cow position:
               
chr29:21645260-21645499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
152, 29
               

               
Conread position:
               
283-528
               

               
Cow position:
               
chr29:1011637-1011411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
284-518
               

               
Cow position:
               
chr29:30548711-30548948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 185
               

               
Conread position:
               
284-528
               

               
Cow position:
               
chr29:38396301-38396546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
153, 23
               

               
Conread position:
               
284-528
               

               
Cow position:
               
chr29:44139308-44139063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
38, 128
               

               
Conread position:
               
287-528
               

               
Cow position:
               
chr29:43544661-43544423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
152, 37
               

               
Conread position:
               
288-527
               

               
Cow position:
               
chr29:32656373-32656617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
288-528
               

               
Cow position:
               
chr29:16290666-16290905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 161
               

               
Conread position:
               
303-528
               

               
Cow position:
               
chr29:22533913-22534145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
20, 26
               

               
Conread position:
               
305-528
               

               
Cow position:
               
chr29:29324464-29324238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
314-528
               

               
Cow position:
               
chr29:28420723-28420939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
317-525
               

               
Cow position:
               
chr29:30827376-30827587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
317-526
               

               
Cow position:
               
chr29:5831050-5830837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
317-528
               

               
Cow position:
               
chr29:9310570-9310785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
317-528
               

               
Cow position:
               
chr29:24188095-24187881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
319-475
               

               
Cow position:
               
chr29:34687808-34687964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
118, 7
               

               
Conread position:
               
319-518
               

               
Cow position:
               
chr29:28066464-28066655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
118, 7
               

               
Conread position:
               
319-527
               

               
Cow position:
               
chr29:30681737-30681522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
118, 7
               

               
Conread position:
               
319-527
               

               
Cow position:
               
chr29:38858241-38858031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
118, 178
               

               
Conread position:
               
320-528
               

               
Cow position:
               
chr29:4423466-4423268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
117, 140
               

               
Conread position:
               
320-528
               

               
Cow position:
               
chr29:7124785-7125003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
320-528
               

               
Cow position:
               
chr29:33321323-33321531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
6, 62
               

               
Conread position:
               
321-506
               

               
Cow position:
               
chr29:35258959-35259145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
116, 133
               

               
Conread position:
               
321-525
               

               
Cow position:
               
chr29:27524861-27524654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
321-526
               

               
Cow position:
               
chr29:17804509-17804710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
113, 83
               

               
Conread position:
               
321-527
               

               
Cow position:
               
chr29:5568464-5568673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
321-527
               

               
Cow position:
               
chr29:23115027-23114819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
321-527
               

               
Cow position:
               
chr29:31981805-31982003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
116, 139
               

               
Conread position:
               
321-528
               

               
Cow position:
               
chr29:4070602-4070802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
113, 56
               

               
Conread position:
               
321-528
               

               
Cow position:
               
chr29:18556646-18556849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
116, 146
               

               
Conread position:
               
321-528
               

               
Cow position:
               
chr29:22167104-22166905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
321-528
               

               
Cow position:
               
chr29:22720677-22720465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
321-528
               

               
Cow position:
               
chr29:22735131-22734924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
111, 58
               

               
Conread position:
               
321-528
               

               
Cow position:
               
chr29:26540566-26540358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
321-528
               

               
Cow position:
               
chr29:31934353-31934558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
116, 141
               

               
Conread position:
               
321-528
               

               
Cow position:
               
chr29:32197671-32197876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
112, 133
               

               
Conread position:
               
321-528
               

               
Cow position:
               
chr29:36357103-36357310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
322-527
               

               
Cow position:
               
chr29:22723576-22723777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
112, 143
               

               
Conread position:
               
322-528
               

               
Cow position:
               
chr29:25944328-25944112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
324-528
               

               
Cow position:
               
chr29:685199-684995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
325-528
               

               
Cow position:
               
chr29:9378614-9378817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 144
               

               
Conread position:
               
327-527
               

               
Cow position:
               
chr29:23825230-23825031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
102, 135
               

               
Conread position:
               
327-528
               

               
Cow position:
               
chr29:39038289-39038087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
107, 133
               

               
Conread position:
               
328-478
               

               
Cow position:
               
chr29:16365908-16365751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
328-528
               

               
Cow position:
               
chr29:3292929-3293125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
109, 131
               

               
Conread position:
               
328-528
               

               
Cow position:
               
chr29:30294884-30294689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
109, 50
               

               
Conread position:
               
331-509
               

               
Cow position:
               
chr29:29974030-29973850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
331-528
               

               
Cow position:
               
chr29:16200494-16200294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
335-528
               

               
Cow position:
               
chr29:36781316-36781128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
336-528
               

               
Cow position:
               
chr29:19363701-19363890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
98, 9
               

               
Conread position:
               
339-528
               

               
Cow position:
               
chr29:16278980-16279159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
339-528
               

               
Cow position:
               
chr29:23637686-23637492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
339-528
               

               
Cow position:
               
chr29:32656100-32655912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
339-528
               

               
Cow position:
               
chr29:34832393-34832211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
109, 39
               

               
Conread position:
               
340-528
               

               
Cow position:
               
chr29:23913400-23913215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
95, 124
               

               
Conread position:
               
346-518
               

               
Cow position:
               
chr29:19420614-19420445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
91, 120
               

               
Conread position:
               
346-528
               

               
Cow position:
               
chr29:15796485-15796666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
346-528
               

               
Cow position:
               
chr29:15797951-15798133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
88, 173
               

               
Conread position:
               
347-499
               

               
Cow position:
               
chr29:629538-629695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
347-509
               

               
Cow position:
               
chr29:24051381-24051215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 59
               

               
Conread position:
               
347-524
               

               
Cow position:
               
chr29:26411469-26411288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
347-528
               

               
Cow position:
               
chr29:14576859-14577039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
90, 117
               

               
Conread position:
               
348-528
               

               
Cow position:
               
chr29:4441204-4441023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
348-528
               

               
Cow position:
               
chr29:19187027-19187208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
89, 116
               

               
Conread position:
               
348-528
               

               
Cow position:
               
chr29:26211053-26211235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
88, 104
               

               
Conread position:
               
348-528
               

               
Cow position:
               
chr29:41422906-41422727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
349-528
               

               
Cow position:
               
chr29:5953857-5953674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
350-528
               

               
Cow position:
               
chr29:43088314-43088488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 29
               

               
Conread position:
               
351-525
               

               
Cow position:
               
chr29:8799010-8798830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
351-528
               

               
Cow position:
               
chr29:25288919-25288737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 56
               

               
Conread position:
               
351-528
               

               
Cow position:
               
chr29:26539239-26539413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
29, 38
               

               
Conread position:
               
353-528
               

               
Cow position:
               
chr29:14375875-14375697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
353-528
               

               
Cow position:
               
chr29:17436757-17436929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 60
               

               
Conread position:
               
353-528
               

               
Cow position:
               
chr29:44684105-44684279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
84, 43
               

               
Conread position:
               
354-527
               

               
Cow position:
               
chr29:8163822-8163646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
354-528
               

               
Cow position:
               
chr29:23142327-23142150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
357-527
               

               
Cow position:
               
chr29:40351065-40350900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
361-498
               

               
Cow position:
               
chr29:42865573-42865712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
361-528
               

               
Cow position:
               
chr29:4484114-4484279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
361-528
               

               
Cow position:
               
chr29:22127884-22128046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
76, 104
               

               
Conread position:
               
363-528
               

               
Cow position:
               
chr29:14746796-14746960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 105
               

               
Conread position:
               
363-528
               

               
Cow position:
               
chr29:22577163-22576996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 92
               

               
Conread position:
               
363-528
               

               
Cow position:
               
chr29:33393694-33393870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
369-527
               

               
Cow position:
               
chr29:17282090-17282242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 84
               

               
Conread position:
               
370-524
               

               
Cow position:
               
chr29:16735247-16735404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
370-528
               

               
Cow position:
               
chr29:11894721-11894882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
370-528
               

               
Cow position:
               
chr29:23819367-23819202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
370-528
               

               
Cow position:
               
chr29:35189630-35189791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
371-528
               

               
Cow position:
               
chr29:42404971-42405131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
373-528
               

               
Cow position:
               
chr29:11081370-11081212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
376-527
               

               
Cow position:
               
chr29:33143325-33143175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
380-524
               

               
Cow position:
               
chr29:28257174-28257320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 81
               

               
Conread position:
               
380-526
               

               
Cow position:
               
chr29:41223198-41223344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
54, 40
               

               
Conread position:
               
380-528
               

               
Cow position:
               
chr29:38732186-38732337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
381-512
               

               
Cow position:
               
chr29:7414535-7414663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
381-523
               

               
Cow position:
               
chr29:2414718-2414573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
381-528
               

               
Cow position:
               
chr29:22019152-22019005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 7
               

               
Conread position:
               
384-528
               

               
Cow position:
               
chr29:30920366-30920218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 122
               

               
Conread position:
               
388-528
               

               
Cow position:
               
chr29:11685208-11685351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
388-528
               

               
Cow position:
               
chr29:24604937-24605078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 81
               

               
Conread position:
               
389-516
               

               
Cow position:
               
chr29:27042314-27042446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
390-528
               

               
Cow position:
               
chr29:36546739-36546600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
396-528
               

               
Cow position:
               
chr29:24119451-24119316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
404-528
               

               
Cow position:
               
chr29:4741334-4741207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               
Show alignments to all cow chromosomes.