Cow genome map
| Conread name: | Ss1.1-rmgp028_b8.5 | 
| Conread position: | 1-97 | 
| Cow position: | chr6:44623100-44623004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 97 | 
| Alignm identity: | 83 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-99 | 
| Cow position: | chr6:28100842-28100744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 99 | 
| Alignm identity: | 82 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-99 | 
| Cow position: | chr6:50983857-50983955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 99 | 
| Alignm identity: | 86 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-106 | 
| Cow position: | chr6:16103574-16103470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 106 | 
| Alignm identity: | 87 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-107 | 
| Cow position: | chr6:2894902-2895009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 108 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-107 | 
| Cow position: | chr6:55143450-55143343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 108 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-109 | 
| Cow position: | chr6:42617298-42617407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 1-109 | 
| Cow position: | chr6:49685233-49685340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 109 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-109 | 
| Cow position: | chr6:53140720-53140612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 11, 69 | 
| Conread position: | 1-111 | 
| Cow position: | chr6:53553167-53553278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-117 | 
| Cow position: | chr6:40774696-40774581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 112, 0 | 
| Conread position: | 1-117 | 
| Cow position: | chr6:52697440-52697557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-118 | 
| Cow position: | chr6:39330708-39330590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 46, 39 | 
| Conread position: | 1-119 | 
| Cow position: | chr6:1834815-1834934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-119 | 
| Cow position: | chr6:3484582-3484463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-119 | 
| Cow position: | chr6:16060098-16059979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-119 | 
| Cow position: | chr6:27477677-27477796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-120 | 
| Cow position: | chr6:34115690-34115810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-122 | 
| Cow position: | chr6:50571992-50572114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 45, 39 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:47150089-47150213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 31, 12 | 
| Conread position: | 1-126 | 
| Cow position: | chr6:42131147-42131016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 1-128 | 
| Cow position: | chr6:61136842-61136967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 101, 86 | 
| Conread position: | 1-129 | 
| Cow position: | chr6:31927724-31927850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 101, 57 | 
| Conread position: | 1-129 | 
| Cow position: | chr6:65866604-65866476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 101, 109 | 
| Conread position: | 1-133 | 
| Cow position: | chr6:3444993-3444863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 100, 32 | 
| Conread position: | 1-134 | 
| Cow position: | chr6:4902974-4902847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 97, 0 | 
| Conread position: | 1-134 | 
| Cow position: | chr6:33918464-33918329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 100, 40 | 
| Conread position: | 1-135 | 
| Cow position: | chr6:21608170-21608300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 1-135 | 
| Cow position: | chr6:31739219-31739360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-138 | 
| Cow position: | chr6:14133631-14133771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-138 | 
| Cow position: | chr6:26771298-26771158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 1-138 | 
| Cow position: | chr6:37148496-37148634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 110, 101 | 
| Conread position: | 1-139 | 
| Cow position: | chr6:49444942-49445080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 100, 130 | 
| Conread position: | 1-141 | 
| Cow position: | chr6:65931045-65931196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-143 | 
| Cow position: | chr6:62808833-62808976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 100, 140 | 
| Conread position: | 1-149 | 
| Cow position: | chr6:30159517-30159667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 110, 99 | 
| Conread position: | 1-149 | 
| Cow position: | chr6:66433590-66433744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 1-151 | 
| Cow position: | chr6:59296458-59296604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 100, 74 | 
| Conread position: | 1-154 | 
| Cow position: | chr6:19809353-19809505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 136, 121 | 
| Conread position: | 1-154 | 
| Cow position: | chr6:35260522-35260677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 1-177 | 
| Cow position: | chr6:19712425-19712248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 100, 66 | 
| Conread position: | 1-177 | 
| Cow position: | chr6:20268351-20268528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 100, 175 | 
| Conread position: | 1-177 | 
| Cow position: | chr6:33949326-33949144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 100, 9 | 
| Conread position: | 1-177 | 
| Cow position: | chr6:34405159-34404981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-178 | 
| Cow position: | chr6:21831836-21831656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 1-181 | 
| Cow position: | chr6:59508021-59508206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 37, 129 | 
| Conread position: | 1-186 | 
| Cow position: | chr6:4389535-4389712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 100, 87 | 
| Conread position: | 1-187 | 
| Cow position: | chr6:22921061-22921249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-190 | 
| Cow position: | chr6:33460766-33460953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 100, 40 | 
| Conread position: | 1-190 | 
| Cow position: | chr6:42420940-42421126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 43, 124 | 
| Conread position: | 1-192 | 
| Cow position: | chr6:8599462-8599658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 1-192 | 
| Cow position: | chr6:20245758-20245951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 1-194 | 
| Cow position: | chr6:43345780-43345591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-194 | 
| Cow position: | chr6:48794331-48794135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 33, 24 | 
| Conread position: | 1-194 | 
| Cow position: | chr6:61443426-61443234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 100, 86 | 
| Conread position: | 1-195 | 
| Cow position: | chr6:2640447-2640244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 100, 66 | 
| Conread position: | 1-195 | 
| Cow position: | chr6:11789076-11789272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-195 | 
| Cow position: | chr6:19427124-19427319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 1-195 | 
| Cow position: | chr6:26925716-26925521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-195 | 
| Cow position: | chr6:27870435-27870644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 100, 19 | 
| Conread position: | 1-195 | 
| Cow position: | chr6:37644238-37644438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 61, 49 | 
| Conread position: | 1-195 | 
| Cow position: | chr6:41232286-41232479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 100, 18 | 
| Conread position: | 1-195 | 
| Cow position: | chr6:41824154-41823956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-195 | 
| Cow position: | chr6:47674797-47674992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-195 | 
| Cow position: | chr6:48421986-48421789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 1-195 | 
| Cow position: | chr6:50527333-50527525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 99, 126 | 
| Conread position: | 1-195 | 
| Cow position: | chr6:51071378-51071578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 100, 190 | 
| Conread position: | 1-195 | 
| Cow position: | chr6:54806897-54807093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 1-195 | 
| Cow position: | chr6:64426865-64427060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 129, 101 | 
| Conread position: | 1-196 | 
| Cow position: | chr6:20451781-20451974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 100, 121 | 
| Conread position: | 1-196 | 
| Cow position: | chr6:27815808-27815625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 146, 70 | 
| Conread position: | 1-196 | 
| Cow position: | chr6:38993967-38993770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-196 | 
| Cow position: | chr6:46633937-46634123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 56, 89 | 
| Conread position: | 1-196 | 
| Cow position: | chr6:53740115-53740313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-196 | 
| Cow position: | chr6:59577023-59577219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 104, 100 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:47731-47539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:126284-126086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:1797449-1797647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:1910992-1911190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:2090082-2090280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:2110440-2110245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 100, 69 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:2185678-2185481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 99, 153 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:2196508-2196710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:2389853-2389655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:2668634-2668435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:3153036-3153235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:4948616-4948814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:5367011-5366813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:6181902-6181704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:6614109-6614305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 100, 113 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:8562390-8562588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:9737440-9737241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:10332432-10332224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:10459412-10459608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 23, 18 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:11721104-11720906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:12927797-12927992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 74 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:14063984-14063787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:14198470-14198666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 129, 100 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:14225519-14225321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:16417867-16417669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:17122213-17122409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 129, 77 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:18418778-18418580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:18803235-18803038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 100, 176 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:18961846-18961654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 102, 58 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:19170959-19171157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:19515674-19515872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:19719394-19719592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:21004330-21004528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 119 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:21719106-21718908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:24237529-24237331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:25376082-25376281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:26667200-26667002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:26837710-26837517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 101, 62 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:27939601-27939799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:28172894-28173091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:32854585-32854398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:33147736-33147931 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 100, 87 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:34016899-34016701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:34842885-34842687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:36258778-36258976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:37389133-37389331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:37487628-37487432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 100, 9 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:38917215-38917017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:39797905-39797707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:40358053-40357855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:40710199-40710397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:41823013-41822815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:42267541-42267736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 100, 87 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:43188567-43188764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:43921460-43921658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:45210968-45211166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:45938103-45938301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:45976323-45976521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:46161850-46161652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:46224861-46224663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:46681483-46681680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 135, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:48468476-48468675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 193 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:51150720-51150916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 100, 136 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:51869759-51869957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:52478768-52478555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:53345470-53345668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:55239514-55239712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:55388561-55388758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 100, 93 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:55538449-55538255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 96, 121 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:56441256-56441058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:56501986-56502181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 130, 48 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:57309045-57309243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:60516402-60516602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:60877119-60877317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:62592886-62592688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:65818407-65818212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 100, 136 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:65844880-65845077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:65862360-65862558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:65874280-65874083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 100, 16 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:66566130-66566327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:67403544-67403346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:67818526-67818328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:67968957-67968742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:68252458-68252656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:68272447-68272256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 101, 36 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:68663237-68663037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 1-197 | 
| Cow position: | chr6:68830118-68830315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 100, 126 | 
| Conread position: | 1-198 | 
| Cow position: | chr6:7216506-7216705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-199 | 
| Cow position: | chr6:11442148-11441947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 100, 192 | 
| Conread position: | 1-199 | 
| Cow position: | chr6:16397508-16397309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 195 | 
| Conread position: | 1-199 | 
| Cow position: | chr6:33509255-33509455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 101, 40 | 
| Conread position: | 1-199 | 
| Cow position: | chr6:39088446-39088646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-199 | 
| Cow position: | chr6:39137304-39137508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 100, 28 | 
| Conread position: | 1-199 | 
| Cow position: | chr6:44016998-44016794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-199 | 
| Cow position: | chr6:44578720-44578523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 100, 124 | 
| Conread position: | 1-199 | 
| Cow position: | chr6:49963339-49963139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-199 | 
| Cow position: | chr6:50446085-50445889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 142 | 
| Conread position: | 1-199 | 
| Cow position: | chr6:58031797-58031994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 101, 86 | 
| Conread position: | 1-200 | 
| Cow position: | chr6:706818-707019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-200 | 
| Cow position: | chr6:8194964-8195167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 1-200 | 
| Cow position: | chr6:10107324-10107524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 100, 28 | 
| Conread position: | 1-200 | 
| Cow position: | chr6:25358751-25358945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 101, 135 | 
| Conread position: | 1-200 | 
| Cow position: | chr6:31548755-31548554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-200 | 
| Cow position: | chr6:40278876-40279077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-200 | 
| Cow position: | chr6:40814186-40814387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-200 | 
| Cow position: | chr6:43789546-43789351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 135, 32 | 
| Conread position: | 1-200 | 
| Cow position: | chr6:47540199-47540401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 1-200 | 
| Cow position: | chr6:60673222-60673421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 124 | 
| Conread position: | 1-200 | 
| Cow position: | chr6:62331243-62331045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 100, 136 | 
| Conread position: | 1-200 | 
| Cow position: | chr6:66199464-66199661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 33, 58 | 
| Conread position: | 1-201 | 
| Cow position: | chr6:34075701-34075894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 100, 87 | 
| Conread position: | 1-204 | 
| Cow position: | chr6:366890-367095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-205 | 
| Cow position: | chr6:56651844-56651641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 100, 123 | 
| Conread position: | 1-216 | 
| Cow position: | chr6:14706738-14706520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 100, 12 | 
| Conread position: | 1-218 | 
| Cow position: | chr6:49794782-49795000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 100, 200 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:49706924-49706701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 100, 217 | 
| Conread position: | 1-223 | 
| Cow position: | chr6:55265951-55265729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 100, 113 | 
| Conread position: | 1-227 | 
| Cow position: | chr6:1293591-1293359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 101, 66 | 
| Conread position: | 1-229 | 
| Cow position: | chr6:46529090-46529310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 102, 10 | 
| Conread position: | 1-233 | 
| Cow position: | chr6:1264283-1264513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 100, 195 | 
| Conread position: | 1-233 | 
| Cow position: | chr6:55205763-55205526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 101, 67 | 
| Conread position: | 1-234 | 
| Cow position: | chr6:36918493-36918252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 130, 45 | 
| Conread position: | 1-236 | 
| Cow position: | chr6:52216081-52215839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 101, 141 | 
| Conread position: | 1-236 | 
| Cow position: | chr6:52235572-52235330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 101, 141 | 
| Conread position: | 1-249 | 
| Cow position: | chr6:17631946-17631695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 100, 201 | 
| Conread position: | 1-249 | 
| Cow position: | chr6:36901834-36902084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 100, 200 | 
| Conread position: | 1-256 | 
| Cow position: | chr6:22507420-22507691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-262 | 
| Cow position: | chr6:28180290-28180029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 131, 88 | 
| Conread position: | 1-263 | 
| Cow position: | chr6:10682417-10682680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 49, 204 | 
| Conread position: | 1-265 | 
| Cow position: | chr6:16518182-16517919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 100, 134 | 
| Conread position: | 1-267 | 
| Cow position: | chr6:21312081-21311816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 87 | 
| Conread position: | 1-269 | 
| Cow position: | chr6:31688706-31688429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 105, 88 | 
| Conread position: | 1-269 | 
| Cow position: | chr6:54357701-54357432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 59, 139 | 
| Conread position: | 1-277 | 
| Cow position: | chr6:58594437-58594156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 91, 231 | 
| Conread position: | 1-285 | 
| Cow position: | chr6:1866361-1866649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 101, 88 | 
| Conread position: | 1-289 | 
| Cow position: | chr6:57474054-57474336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 99, 196 | 
| Conread position: | 1-289 | 
| Cow position: | chr6:68297906-68297628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 100, 75 | 
| Conread position: | 1-296 | 
| Cow position: | chr6:13592403-13592676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 132, 40 | 
| Conread position: | 1-309 | 
| Cow position: | chr6:24327461-24327137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 143 | 
| Conread position: | 1-312 | 
| Cow position: | chr6:8318491-8318156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 101, 89 | 
| Conread position: | 1-312 | 
| Cow position: | chr6:9733157-9732836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 59 | 
| Conread position: | 1-313 | 
| Cow position: | chr6:60152710-60153045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 1-322 | 
| Cow position: | chr6:16675500-16675818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 101, 75 | 
| Conread position: | 1-343 | 
| Cow position: | chr6:48807314-48806955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 83, 46 | 
| Conread position: | 1-354 | 
| Cow position: | chr6:60456505-60456878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 95 | 
| Conread position: | 1-358 | 
| Cow position: | chr6:46205692-46206066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 322 | 
| Conread position: | 1-359 | 
| Cow position: | chr6:12629688-12630075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 70, 338 | 
| Conread position: | 1-360 | 
| Cow position: | chr6:3978987-3978607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 194, 100 | 
| Conread position: | 1-371 | 
| Cow position: | chr6:606936-607329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 255 | 
| Conread position: | 1-372 | 
| Cow position: | chr6:11638066-11637689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 74 | 
| Conread position: | 1-372 | 
| Cow position: | chr6:36928327-36928728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 94 | 
| Conread position: | 1-374 | 
| Cow position: | chr6:24652506-24652125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 100 | 
| Conread position: | 1-376 | 
| Cow position: | chr6:49411005-49410626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 100, 53 | 
| Conread position: | 1-377 | 
| Cow position: | chr6:58589710-58590094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 100, 88 | 
| Conread position: | 1-381 | 
| Cow position: | chr6:31081723-31082117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 100, 306 | 
| Conread position: | 1-397 | 
| Cow position: | chr6:44098762-44099178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 88 | 
| Conread position: | 1-407 | 
| Cow position: | chr6:48169619-48170040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 328 | 
| Conread position: | 1-408 | 
| Cow position: | chr6:6768951-6769383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 99, 312 | 
| Conread position: | 1-412 | 
| Cow position: | chr6:6642914-6642501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 137 | 
| Conread position: | 1-412 | 
| Cow position: | chr6:17111342-17110930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 129, 77 | 
| Conread position: | 1-423 | 
| Cow position: | chr6:65711501-65711933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 252 | 
| Conread position: | 1-427 | 
| Cow position: | chr6:14696700-14696243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 327 | 
| Conread position: | 1-427 | 
| Cow position: | chr6:58605956-58606406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 99, 315 | 
| Conread position: | 1-430 | 
| Cow position: | chr6:10695534-10695985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 22 | 
| Conread position: | 1-430 | 
| Cow position: | chr6:18583119-18582688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 13, 93 | 
| Conread position: | 1-432 | 
| Cow position: | chr6:4864864-4864420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 100 | 
| Conread position: | 1-432 | 
| Cow position: | chr6:6943999-6943554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 177, 25 | 
| Conread position: | 1-432 | 
| Cow position: | chr6:31636013-31635557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 153 | 
| Conread position: | 1-432 | 
| Cow position: | chr6:52002044-52002482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 101, 89 | 
| Conread position: | 1-432 | 
| Cow position: | chr6:56842834-56843281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 362 | 
| Conread position: | 1-432 | 
| Cow position: | chr6:58073717-58074175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 389 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:181718-181274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 101, 58 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:1817191-1816735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 100, 338 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:47383676-47384136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 100, 41 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:51733905-51734360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 100, 88 | 
| Conread position: | 1-435 | 
| Cow position: | chr6:65910149-65910603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 100, 316 | 
| Conread position: | 1-436 | 
| Cow position: | chr6:16625622-16626080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 102, 271 | 
| Conread position: | 1-439 | 
| Cow position: | chr6:58747885-58748352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 100, 60 | 
| Conread position: | 1-449 | 
| Cow position: | chr6:12550942-12551417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 176 | 
| Conread position: | 1-455 | 
| Cow position: | chr6:11169382-11169855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 134 | 
| Conread position: | 1-458 | 
| Cow position: | chr6:35103650-35103172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 87 | 
| Conread position: | 1-459 | 
| Cow position: | chr6:9751371-9750900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 292 | 
| Conread position: | 1-459 | 
| Cow position: | chr6:14958668-14958183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 32 | 
| Conread position: | 1-469 | 
| Cow position: | chr6:10612537-10613010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 73 | 
| Conread position: | 1-477 | 
| Cow position: | chr6:14839352-14838871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 144 | 
| Conread position: | 1-477 | 
| Cow position: | chr6:66532128-66531647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 137 | 
| Conread position: | 1-478 | 
| Cow position: | chr6:8209911-8209428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 497 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 87 | 
| Conread position: | 1-478 | 
| Cow position: | chr6:18049351-18048848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 505 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 325 | 
| Conread position: | 1-479 | 
| Cow position: | chr6:25407732-25407215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 520 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 338 | 
| Conread position: | 1-481 | 
| Cow position: | chr6:47339682-47339179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 291 | 
| Conread position: | 1-484 | 
| Cow position: | chr6:24004221-24004720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 512 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 142 | 
| Conread position: | 1-484 | 
| Cow position: | chr6:55474924-55475437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 520 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 100, 126 | 
| Conread position: | 1-495 | 
| Cow position: | chr6:40031867-40032377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 522 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 140 | 
| Conread position: | 1-497 | 
| Cow position: | chr6:6068014-6067512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 521 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 91 | 
| Conread position: | 1-499 | 
| Cow position: | chr6:6060883-6060376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 516 | 
| Alignm identity: | 373 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 200 | 
| Conread position: | 1-502 | 
| Cow position: | chr6:2546918-2547452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 541 | 
| Alignm identity: | 376 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 17 | 
| Conread position: | 1-513 | 
| Cow position: | chr6:7801689-7801187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 520 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 19 | 
| Conread position: | 1-515 | 
| Cow position: | chr6:36470891-36470360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 542 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 93 | 
| Conread position: | 1-516 | 
| Cow position: | chr6:27852030-27851497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 539 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 321 | 
| Conread position: | 1-518 | 
| Cow position: | chr6:45690935-45690402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 551 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 224 | 
| Conread position: | 1-519 | 
| Cow position: | chr6:17414779-17414233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 554 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 191 | 
| Conread position: | 1-519 | 
| Cow position: | chr6:67187371-67187895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 67 | 
| Conread position: | 1-521 | 
| Cow position: | chr6:55688722-55689245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 537 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 100, 37 | 
| Conread position: | 1-527 | 
| Cow position: | chr6:17090267-17090803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 561 | 
| Alignm identity: | 372 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 77, 71 | 
| Conread position: | 1-527 | 
| Cow position: | chr6:28084339-28083809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 106, 69 | 
| Conread position: | 1-527 | 
| Cow position: | chr6:39093436-39093967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 123 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:143684-143155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 545 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 83, 50 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:323636-323079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 558 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:8804869-8804320 (view UCSC Genome Browser custom track) | 
| Alignm length: | 565 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 65 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:10176624-10176076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 86 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:11192777-11192257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 375 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 17 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:16765718-16765175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 549 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 430 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:18080841-18080293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 561 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 331 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:18447835-18447292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 322 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:18987893-18988414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 549 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 12 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:28156443-28155950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 534 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 114 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:29484786-29485306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 101, 111 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:31535882-31535350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 552 | 
| Alignm identity: | 374 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 191, 11 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:32125741-32126275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 547 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 296 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:32269176-32268664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 547 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 51, 89 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:33302085-33302619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 67 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:39358661-39358120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 554 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 198, 19 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:47305002-47305565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 567 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 121 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:49398943-49398406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 380 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 327 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:51835077-51835621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 550 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 9 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:54647851-54647276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 577 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 561 | 
| Conread position: | 1-528 | 
| Cow position: | chr6:56849676-56850240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 567 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 475 | 
| Conread position: | 2-96 | 
| Cow position: | chr6:30826377-30826283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 95 | 
| Alignm identity: | 80 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 2-109 | 
| Cow position: | chr6:24583560-24583455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 108 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 2-122 | 
| Cow position: | chr6:19695217-19695338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 2-122 | 
| Cow position: | chr6:40157707-40157587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 100, 62 | 
| Conread position: | 2-173 | 
| Cow position: | chr6:55763065-55763235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 98, 134 | 
| Conread position: | 2-177 | 
| Cow position: | chr6:18904896-18904721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 99, 151 | 
| Conread position: | 2-195 | 
| Cow position: | chr6:48946690-48946499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 77, 62 | 
| Conread position: | 2-196 | 
| Cow position: | chr6:12623146-12623339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 142 | 
| Conread position: | 2-197 | 
| Cow position: | chr6:10106325-10106124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 2-197 | 
| Cow position: | chr6:60931222-60931026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 65, 26 | 
| Conread position: | 2-199 | 
| Cow position: | chr6:22877479-22877287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 99 | 
| Conread position: | 2-200 | 
| Cow position: | chr6:5672905-5673104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 55 | 
| Conread position: | 2-259 | 
| Cow position: | chr6:39916852-39917124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 94, 237 | 
| Conread position: | 2-262 | 
| Cow position: | chr6:3017114-3017386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 97, 145 | 
| Conread position: | 2-264 | 
| Cow position: | chr6:16251870-16252125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 99, 136 | 
| Conread position: | 2-309 | 
| Cow position: | chr6:66431520-66431826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 229 | 
| Conread position: | 2-312 | 
| Cow position: | chr6:29112985-29112670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 100, 192 | 
| Conread position: | 2-334 | 
| Cow position: | chr6:41557158-41557486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 228, 96 | 
| Conread position: | 2-342 | 
| Cow position: | chr6:45617764-45617419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 99, 11 | 
| Conread position: | 2-376 | 
| Cow position: | chr6:44372263-44371874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 100, 57 | 
| Conread position: | 2-413 | 
| Cow position: | chr6:53178314-53178737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 38 | 
| Conread position: | 2-458 | 
| Cow position: | chr6:19681841-19681369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 174, 98 | 
| Conread position: | 2-458 | 
| Cow position: | chr6:42565361-42565843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 373 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 155 | 
| Conread position: | 2-476 | 
| Cow position: | chr6:67214417-67214924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 509 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 309 | 
| Conread position: | 2-478 | 
| Cow position: | chr6:51674585-51675084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 504 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 315 | 
| Conread position: | 2-493 | 
| Cow position: | chr6:36652105-36652615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 99, 61 | 
| Conread position: | 2-499 | 
| Cow position: | chr6:445002-445522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 527 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 137, 99 | 
| Conread position: | 2-526 | 
| Cow position: | chr6:2607289-2607829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 552 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 87 | 
| Conread position: | 2-527 | 
| Cow position: | chr6:1770519-1769972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 551 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 18 | 
| Conread position: | 2-527 | 
| Cow position: | chr6:66363569-66363010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 561 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 341 | 
| Conread position: | 2-528 | 
| Cow position: | chr6:5302724-5302179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 556 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 84 | 
| Conread position: | 4-154 | 
| Cow position: | chr6:21302296-21302445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 97, 84 | 
| Conread position: | 4-458 | 
| Cow position: | chr6:63047255-63047748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 9 | 
| Conread position: | 4-528 | 
| Cow position: | chr6:32121589-32122118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 548 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 6 | 
| Conread position: | 5-98 | 
| Cow position: | chr6:59620318-59620412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 95 | 
| Alignm identity: | 84 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 5-114 | 
| Cow position: | chr6:6459937-6460047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 5-154 | 
| Cow position: | chr6:63094485-63094636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 5-182 | 
| Cow position: | chr6:64888774-64888946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 5-194 | 
| Cow position: | chr6:41961287-41961099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 82, 94 | 
| Conread position: | 5-194 | 
| Cow position: | chr6:44510913-44511109 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 5-195 | 
| Cow position: | chr6:10335487-10335296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 92, 88 | 
| Conread position: | 5-195 | 
| Cow position: | chr6:12515834-12516015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 51, 7 | 
| Conread position: | 5-195 | 
| Cow position: | chr6:35274789-35274597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 97, 111 | 
| Conread position: | 5-195 | 
| Cow position: | chr6:61066764-61066956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 59, 143 | 
| Conread position: | 5-195 | 
| Cow position: | chr6:65891254-65891065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 96, 155 | 
| Conread position: | 5-197 | 
| Cow position: | chr6:561298-561490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 96, 84 | 
| Conread position: | 5-197 | 
| Cow position: | chr6:6117878-6117677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 5-197 | 
| Cow position: | chr6:9375693-9375502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 57 | 
| Conread position: | 5-197 | 
| Cow position: | chr6:10605362-10605557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 5-197 | 
| Cow position: | chr6:20056310-20056500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 124, 15 | 
| Conread position: | 5-197 | 
| Cow position: | chr6:44146121-44145928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 97, 116 | 
| Conread position: | 5-197 | 
| Cow position: | chr6:49684888-49684694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 5-200 | 
| Cow position: | chr6:12116372-12116179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 97, 24 | 
| Conread position: | 5-201 | 
| Cow position: | chr6:3936225-3936421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 96, 84 | 
| Conread position: | 5-202 | 
| Cow position: | chr6:55573429-55573229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 5-203 | 
| Cow position: | chr6:24649533-24649723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 5-243 | 
| Cow position: | chr6:13307579-13307342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 96, 196 | 
| Conread position: | 5-263 | 
| Cow position: | chr6:12844988-12845269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 187 | 
| Conread position: | 5-263 | 
| Cow position: | chr6:44906163-44906428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 59, 101 | 
| Conread position: | 5-265 | 
| Cow position: | chr6:1174823-1174562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 96 | 
| Conread position: | 5-278 | 
| Cow position: | chr6:10422843-10423140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 55, 254 | 
| Conread position: | 5-278 | 
| Cow position: | chr6:47848022-47847740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 5-289 | 
| Cow position: | chr6:61180753-61180478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 38, 91 | 
| Conread position: | 5-309 | 
| Cow position: | chr6:55608128-55607804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 5-352 | 
| Cow position: | chr6:67544614-67544249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 289 | 
| Conread position: | 5-358 | 
| Cow position: | chr6:5958337-5957975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 53 | 
| Conread position: | 5-402 | 
| Cow position: | chr6:62925315-62924899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 30 | 
| Conread position: | 5-418 | 
| Cow position: | chr6:54140497-54140910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 194, 5 | 
| Conread position: | 5-432 | 
| Cow position: | chr6:65871596-65872014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 101, 93 | 
| Conread position: | 5-433 | 
| Cow position: | chr6:55842482-55842036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 97, 340 | 
| Conread position: | 5-436 | 
| Cow position: | chr6:63197489-63197032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 130, 58 | 
| Conread position: | 5-476 | 
| Cow position: | chr6:54867197-54867691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 504 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 33 | 
| Conread position: | 5-484 | 
| Cow position: | chr6:28811317-28810824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 505 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 96, 331 | 
| Conread position: | 5-489 | 
| Cow position: | chr6:42518648-42519171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 527 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 441 | 
| Conread position: | 5-513 | 
| Cow position: | chr6:23695676-23696207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 536 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 482 | 
| Conread position: | 5-516 | 
| Cow position: | chr6:18955355-18954876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 517 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 162 | 
| Conread position: | 5-516 | 
| Cow position: | chr6:61269013-61269523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 374 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 85 | 
| Conread position: | 5-524 | 
| Cow position: | chr6:35990550-35990020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 541 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 290 | 
| Conread position: | 5-526 | 
| Cow position: | chr6:24902459-24901934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 537 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 95 | 
| Conread position: | 5-527 | 
| Cow position: | chr6:36195892-36196428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 545 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 295 | 
| Conread position: | 5-527 | 
| Cow position: | chr6:46283284-46282770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 97, 142 | 
| Conread position: | 5-527 | 
| Cow position: | chr6:46292652-46292133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 536 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 98 | 
| Conread position: | 5-528 | 
| Cow position: | chr6:5095876-5095319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 562 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 339 | 
| Conread position: | 5-528 | 
| Cow position: | chr6:13366976-13367505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 547 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 53 | 
| Conread position: | 5-528 | 
| Cow position: | chr6:29210180-29210700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 544 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 117 | 
| Conread position: | 5-528 | 
| Cow position: | chr6:32867528-32866998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 544 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 283 | 
| Conread position: | 5-528 | 
| Cow position: | chr6:35181574-35181031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 548 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 65 | 
| Conread position: | 5-528 | 
| Cow position: | chr6:44078195-44078738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 551 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 20 | 
| Conread position: | 5-528 | 
| Cow position: | chr6:45596846-45596323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 547 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 101, 70 | 
| Conread position: | 6-109 | 
| Cow position: | chr6:32300880-32300778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 104 | 
| Alignm identity: | 85 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-122 | 
| Cow position: | chr6:28636349-28636232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-122 | 
| Cow position: | chr6:44598222-44598105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-125 | 
| Cow position: | chr6:1228943-1228823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-136 | 
| Cow position: | chr6:39080746-39080878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-138 | 
| Cow position: | chr6:11185253-11185387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-138 | 
| Cow position: | chr6:13597340-13597206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-138 | 
| Cow position: | chr6:19707258-19707392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-138 | 
| Cow position: | chr6:26916062-26916196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 6-138 | 
| Cow position: | chr6:45747178-45747044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-138 | 
| Cow position: | chr6:50755702-50755836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-138 | 
| Cow position: | chr6:63714460-63714327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 96, 84 | 
| Conread position: | 6-139 | 
| Cow position: | chr6:28161235-28161370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-140 | 
| Cow position: | chr6:8283948-8283812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-156 | 
| Cow position: | chr6:50625291-50625445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 6-159 | 
| Cow position: | chr6:45723295-45723142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 95, 136 | 
| Conread position: | 6-174 | 
| Cow position: | chr6:65920930-65920760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-177 | 
| Cow position: | chr6:24757669-24757496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-177 | 
| Cow position: | chr6:64895766-64895937 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 95, 41 | 
| Conread position: | 6-181 | 
| Cow position: | chr6:52627294-52627467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 96, 88 | 
| Conread position: | 6-186 | 
| Cow position: | chr6:46948641-46948823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-186 | 
| Cow position: | chr6:62578612-62578794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 6-187 | 
| Cow position: | chr6:17865219-17865401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 95, 104 | 
| Conread position: | 6-187 | 
| Cow position: | chr6:28700736-28700553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-187 | 
| Cow position: | chr6:68340120-68339937 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-195 | 
| Cow position: | chr6:5751661-5751850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 95, 144 | 
| Conread position: | 6-195 | 
| Cow position: | chr6:12662501-12662310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-195 | 
| Cow position: | chr6:25783992-25784182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 94, 141 | 
| Conread position: | 6-195 | 
| Cow position: | chr6:38987994-38987805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 123, 95 | 
| Conread position: | 6-195 | 
| Cow position: | chr6:45901164-45900973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-195 | 
| Cow position: | chr6:55610556-55610369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 94, 116 | 
| Conread position: | 6-196 | 
| Cow position: | chr6:1278831-1278640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 95, 27 | 
| Conread position: | 6-196 | 
| Cow position: | chr6:11869108-11868916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-196 | 
| Cow position: | chr6:27152504-27152696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:76613-76420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:180684-180494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 95, 134 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:444099-443906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:758052-758245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:1406324-1406131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:1957092-1956899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:2867631-2867438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:2898591-2898784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:3095277-3095084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:3157547-3157354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:3719663-3719856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:6557700-6557893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:6578095-6577902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:7137513-7137321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:7449324-7449517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:9226347-9226538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 95, 170 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:9741994-9742187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:10013626-10013819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:10536110-10535917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:10865769-10865962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:11020487-11020680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:11034428-11034235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:11402149-11402341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 96, 53 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:11453038-11452845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:12972225-12972418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:12998245-12998438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:13489223-13489416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:13531493-13531686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:13605550-13605357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:13619792-13619599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:13945692-13945885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:14388897-14388704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:14891153-14890960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:15881995-15881802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:16049467-16049281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 95, 65 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:17352174-17351981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:17935347-17935154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:18502985-18502792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:18649085-18648892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:18911905-18911712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:19737356-19737549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:19819273-19819466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:19843102-19843295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:20174211-20174404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:20580950-20580757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:20689647-20689456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 95, 120 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:21164132-21164325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:21712535-21712728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:21857565-21857757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 95, 88 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:22043181-22042991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 95, 64 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:22627899-22627706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:22736877-22736688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 95, 121 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:23426872-23427065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:23567779-23567586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:24074887-24074694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:24262946-24263139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:25095703-25095896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:25207265-25207458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:25363380-25363573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:25374279-25374086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:25410285-25410478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:26830356-26830549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:27093758-27093566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 97, 79 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:27173670-27173863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:27401403-27401212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 95, 136 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:27541390-27541583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:28000568-28000376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:28184492-28184299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:28293996-28293803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:28343330-28343521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 94, 108 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:28486832-28486640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 95, 136 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:28791513-28791705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 95, 64 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:30708368-30708175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:31192648-31192454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:31752731-31752922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 94, 108 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:33466783-33466972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 56, 84 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:33489405-33489213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 95, 31 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:33863435-33863628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:33884254-33884061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:33897547-33897361 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 124, 95 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:34111255-34111062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:37217447-37217640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:37736749-37736942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:38053568-38053761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:38061441-38061633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 95, 120 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:38776280-38776473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:40250975-40250783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:40449838-40449645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:40450449-40450641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 95, 143 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:40912721-40912532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 95, 121 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:41033742-41033935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:41158492-41158299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:41470746-41470939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:41835129-41835322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:42481710-42481900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 95, 110 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:43049840-43050030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 130 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:43389744-43389937 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:43404269-43404462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:43604450-43604643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:43955381-43955574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:43999330-43999137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:45130244-45130051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:45591974-45592172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:45694690-45694883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:45751762-45751955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:45765292-45765099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:46371765-46371574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 95, 29 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:46607680-46607487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:46666786-46666974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 81, 19 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:49579926-49580119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:52482174-52482367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:53052408-53052601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:53271483-53271676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:53448727-53448920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:53542640-53542447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:54202215-54202022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:54886786-54886593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:54980781-54980974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:55361785-55361978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:55582318-55582125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:55594071-55594264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:55720997-55721190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:56888241-56888425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 95, 131 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:57522004-57522197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:57796218-57796025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:58761772-58761966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:58940543-58940350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:59052247-59052440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:59834907-59835100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:60066152-60066345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:61051294-61051101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:61257688-61257881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:62038224-62038413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 95, 80 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:62323353-62323160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:63177949-63178142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:64096972-64096779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:64337943-64337750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:64720975-64721161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 95, 150 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:65041153-65040960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:65863153-65863346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:67554059-67554253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-197 | 
| Cow position: | chr6:68871100-68870907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-199 | 
| Cow position: | chr6:10266306-10266112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 95, 186 | 
| Conread position: | 6-199 | 
| Cow position: | chr6:14827008-14827201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 96, 33 | 
| Conread position: | 6-199 | 
| Cow position: | chr6:24125604-24125409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 96, 115 | 
| Conread position: | 6-199 | 
| Cow position: | chr6:56080088-56079891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-199 | 
| Cow position: | chr6:63716084-63716277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 96, 149 | 
| Conread position: | 6-200 | 
| Cow position: | chr6:8207669-8207473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-200 | 
| Cow position: | chr6:9235341-9235537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-200 | 
| Cow position: | chr6:11288639-11288442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 81, 145 | 
| Conread position: | 6-200 | 
| Cow position: | chr6:17871077-17871273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-200 | 
| Cow position: | chr6:55040538-55040341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-200 | 
| Cow position: | chr6:63040506-63040310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-201 | 
| Cow position: | chr6:58390195-58389997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 6-203 | 
| Cow position: | chr6:327534-327333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 105, 95 | 
| Conread position: | 6-208 | 
| Cow position: | chr6:59076883-59076678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-220 | 
| Cow position: | chr6:57597320-57597095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 6-249 | 
| Cow position: | chr6:13494262-13494017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 95, 195 | 
| Conread position: | 6-263 | 
| Cow position: | chr6:29077408-29077665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 96, 57 | 
| Conread position: | 6-267 | 
| Cow position: | chr6:62665605-62665869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 95, 195 | 
| Conread position: | 6-291 | 
| Cow position: | chr6:23987058-23986762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 44, 192 | 
| Conread position: | 6-318 | 
| Cow position: | chr6:1784086-1783763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 70 | 
| Conread position: | 6-376 | 
| Cow position: | chr6:52556792-52556409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 96, 83 | 
| Conread position: | 6-381 | 
| Cow position: | chr6:43621845-43622224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 95, 185 | 
| Conread position: | 6-435 | 
| Cow position: | chr6:2074327-2074766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 95, 143 | 
| Conread position: | 6-455 | 
| Cow position: | chr6:16706689-16707165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 88 | 
| Conread position: | 6-478 | 
| Cow position: | chr6:6343107-6343607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 507 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 59 | 
| Conread position: | 6-495 | 
| Cow position: | chr6:28147935-28148448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 521 | 
| Alignm identity: | 363 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 22 | 
| Conread position: | 6-496 | 
| Cow position: | chr6:54979338-54979830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 6-528 | 
| Cow position: | chr6:24781885-24781328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 337 | 
| Conread position: | 7-116 | 
| Cow position: | chr6:7538993-7539103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 7-157 | 
| Cow position: | chr6:34608854-34608702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 7-177 | 
| Cow position: | chr6:54218352-54218523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 7-185 | 
| Cow position: | chr6:31520268-31520448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 7-187 | 
| Cow position: | chr6:21732430-21732247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 28, 120 | 
| Conread position: | 7-193 | 
| Cow position: | chr6:4681436-4681624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 44, 117 | 
| Conread position: | 7-194 | 
| Cow position: | chr6:19570105-19569918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 124, 94 | 
| Conread position: | 7-195 | 
| Cow position: | chr6:1891181-1890976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 7-195 | 
| Cow position: | chr6:3885676-3885486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 7-195 | 
| Cow position: | chr6:66304160-66303977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 95, 72 | 
| Conread position: | 7-197 | 
| Cow position: | chr6:596056-595864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 7-197 | 
| Cow position: | chr6:10045036-10045228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 7-197 | 
| Cow position: | chr6:20215566-20215374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 7-197 | 
| Cow position: | chr6:23117719-23117527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 7-197 | 
| Cow position: | chr6:45666110-45665918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 95, 157 | 
| Conread position: | 7-197 | 
| Cow position: | chr6:62851598-62851408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 95, 106 | 
| Conread position: | 7-197 | 
| Cow position: | chr6:67430209-67430017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 7-199 | 
| Cow position: | chr6:3575119-3575318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 7-199 | 
| Cow position: | chr6:46391376-46391566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 94, 81 | 
| Conread position: | 7-368 | 
| Cow position: | chr6:50120105-50119719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 81 | 
| Conread position: | 7-373 | 
| Cow position: | chr6:28148525-28148903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 96 | 
| Conread position: | 7-449 | 
| Cow position: | chr6:37634470-37634942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 118 | 
| Conread position: | 7-526 | 
| Cow position: | chr6:28482695-28483238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 551 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 315 | 
| Conread position: | 8-118 | 
| Cow position: | chr6:479377-479488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 8-176 | 
| Cow position: | chr6:17050201-17050372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 8-195 | 
| Cow position: | chr6:9207604-9207417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 94, 5 | 
| Conread position: | 8-195 | 
| Cow position: | chr6:28112007-28111822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 93, 130 | 
| Conread position: | 8-199 | 
| Cow position: | chr6:52120922-52121112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 128, 5 | 
| Conread position: | 8-200 | 
| Cow position: | chr6:6471091-6470900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 96, 49 | 
| Conread position: | 8-200 | 
| Cow position: | chr6:32858579-32858775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 31, 5 | 
| Conread position: | 8-219 | 
| Cow position: | chr6:33451651-33451860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 30, 54 | 
| Conread position: | 8-222 | 
| Cow position: | chr6:64815341-64815116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 82, 6 | 
| Conread position: | 8-255 | 
| Cow position: | chr6:7009418-7009649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 182, 80 | 
| Conread position: | 8-286 | 
| Cow position: | chr6:16618849-16619130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 187, 91 | 
| Conread position: | 9-197 | 
| Cow position: | chr6:32054852-32054666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 92, 78 | 
| Conread position: | 9-197 | 
| Cow position: | chr6:43014499-43014309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 9-199 | 
| Cow position: | chr6:15137338-15137146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 92, 157 | 
| Conread position: | 9-291 | 
| Cow position: | chr6:47625276-47624976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 93, 26 | 
| Conread position: | 9-423 | 
| Cow position: | chr6:456863-457293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 29 | 
| Conread position: | 9-434 | 
| Cow position: | chr6:2324514-2324095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 92, 132 | 
| Conread position: | 9-524 | 
| Cow position: | chr6:60859621-60859079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 552 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 128, 85 | 
| Conread position: | 9-528 | 
| Cow position: | chr6:64431624-64432156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 545 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 80 | 
| Conread position: | 10-117 | 
| Cow position: | chr6:1637124-1637015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-119 | 
| Cow position: | chr6:89422-89312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-119 | 
| Cow position: | chr6:34494501-34494611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-135 | 
| Cow position: | chr6:15310180-15310054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-135 | 
| Cow position: | chr6:54963687-54963561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 10-137 | 
| Cow position: | chr6:28065820-28065949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-139 | 
| Cow position: | chr6:14929277-14929407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 10-139 | 
| Cow position: | chr6:51468148-51468274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 126, 78 | 
| Conread position: | 10-173 | 
| Cow position: | chr6:37762072-37762237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-173 | 
| Cow position: | chr6:52209350-52209515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-186 | 
| Cow position: | chr6:41193180-41193360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 13, 164 | 
| Conread position: | 10-187 | 
| Cow position: | chr6:875641-875462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 91, 7 | 
| Conread position: | 10-191 | 
| Cow position: | chr6:12934456-12934272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 92, 67 | 
| Conread position: | 10-195 | 
| Cow position: | chr6:16645704-16645891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 92, 0 | 
| Conread position: | 10-195 | 
| Cow position: | chr6:39099400-39099213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 91, 150 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:452314-452504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:1538487-1538667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:2875212-2875023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:5851743-5851558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 91, 31 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:5944618-5944429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:7466818-7466629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:8753626-8753437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:9321113-9321304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:11032510-11032321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:12947671-12947482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:13741381-13741567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 71 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:14631272-14631463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:17364677-17364488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:19103074-19102885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:23879226-23879037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:27526172-27525984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 91, 31 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:28276343-28276532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:31568016-31567827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:36532107-36532296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:39998648-39998459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:40549868-40549679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:40975996-40976185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:41876368-41876181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:43039745-43039931 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 91, 132 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:44535998-44535815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 38, 92 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:51718388-51718577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:52431350-52431160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 10-199 | 
| Cow position: | chr6:47773532-47773338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 79, 112 | 
| Conread position: | 10-200 | 
| Cow position: | chr6:35872904-35872714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 91, 78 | 
| Conread position: | 10-200 | 
| Cow position: | chr6:40497256-40497452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 92, 0 | 
| Conread position: | 10-200 | 
| Cow position: | chr6:61548894-61548702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 10-226 | 
| Cow position: | chr6:6569804-6570020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 91, 195 | 
| Conread position: | 10-232 | 
| Cow position: | chr6:28322496-28322272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 91, 171 | 
| Conread position: | 10-265 | 
| Cow position: | chr6:50800728-50800457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 92, 53 | 
| Conread position: | 10-268 | 
| Cow position: | chr6:12387637-12387364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 168, 91 | 
| Conread position: | 10-275 | 
| Cow position: | chr6:33852100-33851828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 91, 126 | 
| Conread position: | 10-278 | 
| Cow position: | chr6:42693046-42693313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 91, 123 | 
| Conread position: | 10-323 | 
| Cow position: | chr6:20231142-20230810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 141 | 
| Conread position: | 10-358 | 
| Cow position: | chr6:16737704-16738072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 326 | 
| Conread position: | 10-423 | 
| Cow position: | chr6:65016207-65015798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 191 | 
| Conread position: | 10-432 | 
| Cow position: | chr6:20255697-20255284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 126, 72 | 
| Conread position: | 10-435 | 
| Cow position: | chr6:3271648-3271217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 26, 216 | 
| Conread position: | 10-435 | 
| Cow position: | chr6:25822320-25821878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 91, 322 | 
| Conread position: | 10-524 | 
| Cow position: | chr6:35842344-35842879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 541 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 117 | 
| Conread position: | 10-528 | 
| Cow position: | chr6:16699945-16700477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 547 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 77 | 
| Conread position: | 12-122 | 
| Cow position: | chr6:37468429-37468318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 12-182 | 
| Cow position: | chr6:37598049-37598215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 65, 91 | 
| Conread position: | 12-195 | 
| Cow position: | chr6:22804681-22804497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 90, 42 | 
| Conread position: | 12-211 | 
| Cow position: | chr6:41152338-41152531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 12-234 | 
| Cow position: | chr6:6167088-6167320 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 104, 90 | 
| Conread position: | 12-243 | 
| Cow position: | chr6:32287305-32287529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 142 | 
| Conread position: | 13-120 | 
| Cow position: | chr6:54974998-54975106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 109 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 13-125 | 
| Cow position: | chr6:51968851-51968963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 114 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 84, 65 | 
| Conread position: | 13-146 | 
| Cow position: | chr6:47977766-47977897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 13-174 | 
| Cow position: | chr6:119662-119827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 37, 51 | 
| Conread position: | 13-185 | 
| Cow position: | chr6:40238393-40238220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 85, 146 | 
| Conread position: | 13-190 | 
| Cow position: | chr6:37390700-37390881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 13-190 | 
| Cow position: | chr6:49627040-49627221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 13-191 | 
| Cow position: | chr6:62015331-62015511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 13-195 | 
| Cow position: | chr6:5501105-5500924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 120, 66 | 
| Conread position: | 13-195 | 
| Cow position: | chr6:11704884-11705066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 123, 88 | 
| Conread position: | 13-195 | 
| Cow position: | chr6:27366009-27366189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 87, 154 | 
| Conread position: | 13-195 | 
| Cow position: | chr6:32461880-32461696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 13-195 | 
| Cow position: | chr6:35132852-35133036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 13-197 | 
| Cow position: | chr6:8206023-8206208 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 89, 165 | 
| Conread position: | 13-197 | 
| Cow position: | chr6:13345227-13345041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 13-197 | 
| Cow position: | chr6:14690640-14690823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 88, 28 | 
| Conread position: | 13-197 | 
| Cow position: | chr6:15275405-15275219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 13-197 | 
| Cow position: | chr6:20552417-20552230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 13-197 | 
| Cow position: | chr6:25789901-25789715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 13-197 | 
| Cow position: | chr6:26413068-26413253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 13-197 | 
| Cow position: | chr6:36299492-36299306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 13-197 | 
| Cow position: | chr6:38872693-38872508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 88, 22 | 
| Conread position: | 13-197 | 
| Cow position: | chr6:46584970-46585158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 13-197 | 
| Cow position: | chr6:48872520-48872335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 88, 60 | 
| Conread position: | 13-197 | 
| Cow position: | chr6:50423714-50423533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 88, 133 | 
| Conread position: | 13-197 | 
| Cow position: | chr6:52424707-52424893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 13-200 | 
| Cow position: | chr6:58075914-58076099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 76 | 
| Conread position: | 13-230 | 
| Cow position: | chr6:41357485-41357713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 13-232 | 
| Cow position: | chr6:37331650-37331882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 24, 73 | 
| Conread position: | 13-273 | 
| Cow position: | chr6:66751561-66751828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 62, 170 | 
| Conread position: | 13-284 | 
| Cow position: | chr6:6187951-6188218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 162, 47 | 
| Conread position: | 13-296 | 
| Cow position: | chr6:30285375-30285660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 88, 114 | 
| Conread position: | 13-303 | 
| Cow position: | chr6:32916234-32915926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 13-313 | 
| Cow position: | chr6:57685845-57686161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 89, 311 | 
| Conread position: | 13-322 | 
| Cow position: | chr6:31879676-31879368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 159, 58 | 
| Conread position: | 13-369 | 
| Cow position: | chr6:16410882-16411255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 13-401 | 
| Cow position: | chr6:1944416-1944809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 125 | 
| Conread position: | 13-409 | 
| Cow position: | chr6:59597343-59597752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 188 | 
| Conread position: | 13-473 | 
| Cow position: | chr6:222754-222289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 261 | 
| Conread position: | 13-484 | 
| Cow position: | chr6:12500543-12501032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 225 | 
| Conread position: | 13-506 | 
| Cow position: | chr6:8636961-8637478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 523 | 
| Alignm identity: | 374 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 476 | 
| Conread position: | 13-526 | 
| Cow position: | chr6:53933163-53932624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 552 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 133 | 
| Conread position: | 13-528 | 
| Cow position: | chr6:12337671-12338213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 547 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 432 | 
| Conread position: | 13-528 | 
| Cow position: | chr6:15305275-15305794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 540 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 76 | 
| Conread position: | 13-528 | 
| Cow position: | chr6:65870711-65871254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 554 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 22 | 
| Conread position: | 14-134 | 
| Cow position: | chr6:50042793-50042914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 14-177 | 
| Cow position: | chr6:62979555-62979394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 116, 87 | 
| Conread position: | 14-194 | 
| Cow position: | chr6:6079218-6079033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 14-195 | 
| Cow position: | chr6:30892832-30892651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 88, 70 | 
| Conread position: | 14-197 | 
| Cow position: | chr6:58439668-58439840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 116, 87 | 
| Conread position: | 14-435 | 
| Cow position: | chr6:52308021-52308461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 87, 262 | 
| Conread position: | 14-435 | 
| Cow position: | chr6:55903920-55904344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 87, 187 | 
| Conread position: | 15-177 | 
| Cow position: | chr6:33215689-33215527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 87, 30 | 
| Conread position: | 15-181 | 
| Cow position: | chr6:41162013-41161844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 15-195 | 
| Cow position: | chr6:23888970-23888794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 90, 39 | 
| Conread position: | 15-195 | 
| Cow position: | chr6:37393025-37392847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 86, 104 | 
| Conread position: | 15-195 | 
| Cow position: | chr6:61162403-61162583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 118, 85 | 
| Conread position: | 15-196 | 
| Cow position: | chr6:10426119-10426301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 86, 99 | 
| Conread position: | 15-197 | 
| Cow position: | chr6:25218617-25218801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 15-197 | 
| Cow position: | chr6:41052555-41052738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 85, 181 | 
| Conread position: | 15-197 | 
| Cow position: | chr6:42416530-42416713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 96, 86 | 
| Conread position: | 15-200 | 
| Cow position: | chr6:54841215-54841024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 51, 168 | 
| Conread position: | 15-213 | 
| Cow position: | chr6:42106360-42106165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 87, 39 | 
| Conread position: | 15-216 | 
| Cow position: | chr6:14932032-14931826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 15-224 | 
| Cow position: | chr6:55387885-55388099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 84, 40 | 
| Conread position: | 15-237 | 
| Cow position: | chr6:17557063-17557284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 175 | 
| Conread position: | 15-305 | 
| Cow position: | chr6:40264511-40264200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 15-308 | 
| Cow position: | chr6:2012707-2013022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 15-525 | 
| Cow position: | chr6:9008919-9008406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 532 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 87 | 
| Conread position: | 15-527 | 
| Cow position: | chr6:48567654-48567138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 531 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 235 | 
| Conread position: | 15-528 | 
| Cow position: | chr6:13688121-13687593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 21 | 
| Conread position: | 15-528 | 
| Cow position: | chr6:61631925-61631385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 550 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 73 | 
| Conread position: | 16-186 | 
| Cow position: | chr6:6239856-6240030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 85, 0 | 
| Conread position: | 16-195 | 
| Cow position: | chr6:27942729-27942906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 85, 133 | 
| Conread position: | 16-376 | 
| Cow position: | chr6:67044660-67045023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 41 | 
| Conread position: | 16-528 | 
| Cow position: | chr6:46465517-46466041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 534 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 311 | 
| Conread position: | 16-528 | 
| Cow position: | chr6:46557747-46558277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 107 | 
| Conread position: | 17-190 | 
| Cow position: | chr6:61452201-61452374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 114, 84 | 
| Conread position: | 17-196 | 
| Cow position: | chr6:1104358-1104178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 84, 44 | 
| Conread position: | 17-197 | 
| Cow position: | chr6:24243119-24243301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 17-197 | 
| Cow position: | chr6:68127144-68127326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 17-528 | 
| Cow position: | chr6:5609768-5609219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 283 | 
| Conread position: | 17-528 | 
| Cow position: | chr6:21587731-21587211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 184 | 
| Conread position: | 18-196 | 
| Cow position: | chr6:7312283-7312462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 83, 57 | 
| Conread position: | 20-195 | 
| Cow position: | chr6:61519137-61519314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 20-527 | 
| Cow position: | chr6:611261-611765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 523 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 8 | 
| Conread position: | 20-528 | 
| Cow position: | chr6:15938171-15937629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 549 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 155 | 
| Conread position: | 21-308 | 
| Cow position: | chr6:32210935-32210625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 21-454 | 
| Cow position: | chr6:26728832-26728381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 281 | 
| Conread position: | 21-528 | 
| Cow position: | chr6:24031069-24031586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 541 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 274 | 
| Conread position: | 22-195 | 
| Cow position: | chr6:10502590-10502416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 80, 46 | 
| Conread position: | 22-253 | 
| Cow position: | chr6:60017765-60018013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 111, 76 | 
| Conread position: | 23-153 | 
| Cow position: | chr6:7010413-7010283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 88, 65 | 
| Conread position: | 23-178 | 
| Cow position: | chr6:58370271-58370430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 23-187 | 
| Cow position: | chr6:50527766-50527600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 23-195 | 
| Cow position: | chr6:4698480-4698310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 26, 117 | 
| Conread position: | 23-195 | 
| Cow position: | chr6:16492218-16492050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 79, 47 | 
| Conread position: | 23-197 | 
| Cow position: | chr6:7174813-7174637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 23-199 | 
| Cow position: | chr6:21300825-21300647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 23-199 | 
| Cow position: | chr6:57574255-57574435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 23-199 | 
| Cow position: | chr6:60467724-60467898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 79, 115 | 
| Conread position: | 23-212 | 
| Cow position: | chr6:56596971-56597160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 78, 176 | 
| Conread position: | 23-373 | 
| Cow position: | chr6:58315743-58316117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 79, 115 | 
| Conread position: | 23-412 | 
| Cow position: | chr6:47039377-47038973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 78, 130 | 
| Conread position: | 23-484 | 
| Cow position: | chr6:4022801-4023283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 28, 79 | 
| Conread position: | 23-528 | 
| Cow position: | chr6:38770995-38771494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 520 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 10 | 
| Conread position: | 24-195 | 
| Cow position: | chr6:51296521-51296349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 77, 46 | 
| Conread position: | 24-199 | 
| Cow position: | chr6:45775700-45775524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 24-432 | 
| Cow position: | chr6:31525749-31526173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 65 | 
| Conread position: | 25-197 | 
| Cow position: | chr6:48290640-48290814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 25-197 | 
| Cow position: | chr6:56926895-56927069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 25-484 | 
| Cow position: | chr6:28476876-28477349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 77, 303 | 
| Conread position: | 26-174 | 
| Cow position: | chr6:34393716-34393567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 26-184 | 
| Cow position: | chr6:41214386-41214548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 26-197 | 
| Cow position: | chr6:5329854-5330023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 76, 101 | 
| Conread position: | 26-200 | 
| Cow position: | chr6:61575303-61575478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 76, 123 | 
| Conread position: | 26-233 | 
| Cow position: | chr6:56626937-56627150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 56, 122 | 
| Conread position: | 26-269 | 
| Cow position: | chr6:47150477-47150722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 7, 30 | 
| Conread position: | 26-432 | 
| Cow position: | chr6:52248431-52248003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 75, 27 | 
| Conread position: | 27-197 | 
| Cow position: | chr6:54447729-54447558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 75, 57 | 
| Conread position: | 27-267 | 
| Cow position: | chr6:10649318-10649063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 73, 120 | 
| Conread position: | 27-438 | 
| Cow position: | chr6:53401071-53401489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 104, 74 | 
| Conread position: | 27-528 | 
| Cow position: | chr6:47519751-47520277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 75, 178 | 
| Conread position: | 28-197 | 
| Cow position: | chr6:12913785-12913614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 28-286 | 
| Cow position: | chr6:19508730-19508460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 201 | 
| Conread position: | 28-376 | 
| Cow position: | chr6:17248434-17248789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 73, 11 | 
| Conread position: | 28-459 | 
| Cow position: | chr6:60057964-60057502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 95 | 
| Conread position: | 29-194 | 
| Cow position: | chr6:58172890-58173052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 72, 59 | 
| Conread position: | 29-478 | 
| Cow position: | chr6:46570823-46571282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 50 | 
| Conread position: | 30-197 | 
| Cow position: | chr6:23545763-23545594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 30-433 | 
| Cow position: | chr6:55577869-55578292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 71, 286 | 
| Conread position: | 30-435 | 
| Cow position: | chr6:63272914-63272482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 260 | 
| Conread position: | 30-497 | 
| Cow position: | chr6:40713796-40713317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 50 | 
| Conread position: | 31-197 | 
| Cow position: | chr6:12389803-12389967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 70, 96 | 
| Conread position: | 31-214 | 
| Cow position: | chr6:49442794-49442978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 71, 181 | 
| Conread position: | 32-497 | 
| Cow position: | chr6:21590423-21590897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 142 | 
| Conread position: | 33-528 | 
| Cow position: | chr6:61489053-61489543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 509 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 67, 42 | 
| Conread position: | 34-275 | 
| Cow position: | chr6:34235728-34235467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 14, 219 | 
| Conread position: | 34-366 | 
| Cow position: | chr6:38233690-38234020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 68 | 
| Conread position: | 35-197 | 
| Cow position: | chr6:38257447-38257283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 35-197 | 
| Cow position: | chr6:47387204-47387370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 35-213 | 
| Cow position: | chr6:6136597-6136777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 66, 166 | 
| Conread position: | 35-433 | 
| Cow position: | chr6:54369188-54368776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 54 | 
| Conread position: | 35-528 | 
| Cow position: | chr6:34196440-34195939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 516 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 296 | 
| Conread position: | 36-197 | 
| Cow position: | chr6:46565059-46564900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 72, 54 | 
| Conread position: | 36-200 | 
| Cow position: | chr6:28559128-28559289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 67, 45 | 
| Conread position: | 36-203 | 
| Cow position: | chr6:15046385-15046216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 66, 23 | 
| Conread position: | 36-527 | 
| Cow position: | chr6:7103520-7103017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 513 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 95, 18 | 
| Conread position: | 36-527 | 
| Cow position: | chr6:7131162-7130639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 374 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 241 | 
| Conread position: | 37-175 | 
| Cow position: | chr6:27887767-27887907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 37-186 | 
| Cow position: | chr6:26696897-26696747 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 38-153 | 
| Cow position: | chr6:22607535-22607422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 93, 62 | 
| Conread position: | 38-363 | 
| Cow position: | chr6:62479454-62479102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 64, 305 | 
| Conread position: | 38-423 | 
| Cow position: | chr6:19330043-19329649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 63, 50 | 
| Conread position: | 39-195 | 
| Cow position: | chr6:32778817-32778659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 40-186 | 
| Cow position: | chr6:11901412-11901552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 40-197 | 
| Cow position: | chr6:69500043-69500196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 62, 132 | 
| Conread position: | 41-197 | 
| Cow position: | chr6:642863-642705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 41-428 | 
| Cow position: | chr6:57164141-57164552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 109 | 
| Conread position: | 41-454 | 
| Cow position: | chr6:38218378-38218819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 61, 210 | 
| Conread position: | 41-528 | 
| Cow position: | chr6:6201162-6201656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 512 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 48 | 
| Conread position: | 42-197 | 
| Cow position: | chr6:41798590-41798433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 42-436 | 
| Cow position: | chr6:51387481-51387880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 182, 97 | 
| Conread position: | 44-197 | 
| Cow position: | chr6:61629987-61629832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 67, 57 | 
| Conread position: | 44-527 | 
| Cow position: | chr6:6264363-6264874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 520 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 46 | 
| Conread position: | 45-142 | 
| Cow position: | chr6:25072452-25072550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 99 | 
| Alignm identity: | 82 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 45-152 | 
| Cow position: | chr6:19012051-19012162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 42, 57 | 
| Conread position: | 45-197 | 
| Cow position: | chr6:7694634-7694483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 56, 39 | 
| Conread position: | 45-197 | 
| Cow position: | chr6:20951677-20951831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 45-297 | 
| Cow position: | chr6:57411361-57411625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 18, 128 | 
| Conread position: | 45-528 | 
| Cow position: | chr6:61515481-61514975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 521 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 401 | 
| Conread position: | 46-197 | 
| Cow position: | chr6:32024618-32024466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 56, 19 | 
| Conread position: | 46-528 | 
| Cow position: | chr6:21534778-21535263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 178 | 
| Conread position: | 47-200 | 
| Cow position: | chr6:59363214-59363056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 47-436 | 
| Cow position: | chr6:57119207-57118811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 57, 45 | 
| Conread position: | 47-528 | 
| Cow position: | chr6:22332678-22332172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 507 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 48-197 | 
| Cow position: | chr6:13597171-13597020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 48-197 | 
| Cow position: | chr6:56808368-56808217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 49-197 | 
| Cow position: | chr6:8527018-8527168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 50-197 | 
| Cow position: | chr6:3591849-3591995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 53, 39 | 
| Conread position: | 50-197 | 
| Cow position: | chr6:32298745-32298596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 50-197 | 
| Cow position: | chr6:44705618-44705469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 50-199 | 
| Cow position: | chr6:60274500-60274350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 50-200 | 
| Cow position: | chr6:1273634-1273481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 51-197 | 
| Cow position: | chr6:2833151-2833003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 51-197 | 
| Cow position: | chr6:25348046-25347898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 51-197 | 
| Cow position: | chr6:54899827-54899975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 52-197 | 
| Cow position: | chr6:42961642-42961495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 52-197 | 
| Cow position: | chr6:43394394-43394539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 49, 138 | 
| Conread position: | 52-197 | 
| Cow position: | chr6:62418805-62418658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 52-527 | 
| Cow position: | chr6:60473859-60474357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 201 | 
| Conread position: | 52-528 | 
| Cow position: | chr6:27240253-27239781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 35 | 
| Conread position: | 52-528 | 
| Cow position: | chr6:50746702-50747223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 161 | 
| Conread position: | 53-200 | 
| Cow position: | chr6:57149229-57149081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 49, 93 | 
| Conread position: | 54-197 | 
| Cow position: | chr6:1331699-1331554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 54-199 | 
| Cow position: | chr6:13603194-13603340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 47, 137 | 
| Conread position: | 54-528 | 
| Cow position: | chr6:54365596-54365106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 94 | 
| Conread position: | 55-196 | 
| Cow position: | chr6:53960283-53960140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 55-197 | 
| Cow position: | chr6:43896944-43896800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 55-525 | 
| Cow position: | chr6:48281723-48282215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 501 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 240 | 
| Conread position: | 58-156 | 
| Cow position: | chr6:55584208-55584308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 101 | 
| Alignm identity: | 84 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 58-197 | 
| Cow position: | chr6:35471795-35471651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 58-199 | 
| Cow position: | chr6:53799149-53799006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 44, 97 | 
| Conread position: | 58-199 | 
| Cow position: | chr6:59688571-59688431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 44, 123 | 
| Conread position: | 58-463 | 
| Cow position: | chr6:16352588-16352193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 92 | 
| Conread position: | 59-197 | 
| Cow position: | chr6:54735472-54735610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 43, 86 | 
| Conread position: | 60-278 | 
| Cow position: | chr6:59277207-59276982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 42, 99 | 
| Conread position: | 62-199 | 
| Cow position: | chr6:35769747-35769608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 65-313 | 
| Cow position: | chr6:54293849-54294116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 65-484 | 
| Cow position: | chr6:65872797-65873210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 66, 92 | 
| Conread position: | 66-185 | 
| Cow position: | chr6:67573864-67573982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 36, 71 | 
| Conread position: | 66-518 | 
| Cow position: | chr6:49422043-49421580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 34, 115 | 
| Conread position: | 70-528 | 
| Cow position: | chr6:3952268-3952744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 67 | 
| Conread position: | 72-358 | 
| Cow position: | chr6:2423494-2423798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 30, 95 | 
| Conread position: | 72-411 | 
| Cow position: | chr6:64449137-64449483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 30, 92 | 
| Conread position: | 73-197 | 
| Cow position: | chr6:17068074-17067948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 77-515 | 
| Cow position: | chr6:26915080-26915538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 257 | 
| Conread position: | 78-197 | 
| Cow position: | chr6:3719257-3719134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 78-197 | 
| Cow position: | chr6:11829917-11830038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 78-312 | 
| Cow position: | chr6:53710867-53711122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 24, 68 | 
| Conread position: | 78-528 | 
| Cow position: | chr6:65676008-65676467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 24, 175 | 
| Conread position: | 79-408 | 
| Cow position: | chr6:20329773-20330111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 29, 122 | 
| Conread position: | 79-528 | 
| Cow position: | chr6:13040203-13040676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 6, 123 | 
| Conread position: | 79-528 | 
| Cow position: | chr6:15242588-15243062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 40 | 
| Conread position: | 79-528 | 
| Cow position: | chr6:54132571-54133034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 13 | 
| Conread position: | 82-199 | 
| Cow position: | chr6:17549087-17549203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 21, 67 | 
| Conread position: | 82-478 | 
| Cow position: | chr6:1002479-1002087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 20, 39 | 
| Conread position: | 82-528 | 
| Cow position: | chr6:38853903-38853433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 211 | 
| Conread position: | 83-518 | 
| Cow position: | chr6:40774591-40774121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 51, 418 | 
| Conread position: | 84-478 | 
| Cow position: | chr6:54991235-54990826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 18, 56 | 
| Conread position: | 86-195 | 
| Cow position: | chr6:61113509-61113620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 86-292 | 
| Cow position: | chr6:40138946-40138729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 86-478 | 
| Cow position: | chr6:9736880-9736485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 16, 51 | 
| Conread position: | 88-528 | 
| Cow position: | chr6:46860404-46859947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 15 | 
| Conread position: | 89-420 | 
| Cow position: | chr6:20098202-20097844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 90-196 | 
| Cow position: | chr6:61978418-61978310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 109 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 90-277 | 
| Cow position: | chr6:62967124-62966929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 12, 145 | 
| Conread position: | 90-355 | 
| Cow position: | chr6:32335580-32335851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 12, 97 | 
| Conread position: | 93-197 | 
| Cow position: | chr6:39994695-39994589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 107 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 93-414 | 
| Cow position: | chr6:3929088-3929427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 105, 62 | 
| Conread position: | 94-358 | 
| Cow position: | chr6:45160523-45160245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 5, 9 | 
| Conread position: | 94-358 | 
| Cow position: | chr6:54885146-54884852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 8, 265 | 
| Conread position: | 94-431 | 
| Cow position: | chr6:38614592-38614938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 9 | 
| Conread position: | 98-528 | 
| Cow position: | chr6:6063507-6063069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 215 | 
| Conread position: | 100-313 | 
| Cow position: | chr6:48344102-48344340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 100-432 | 
| Cow position: | chr6:49002950-49002613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 105, 265 | 
| Conread position: | 100-506 | 
| Cow position: | chr6:14949707-14949286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 196 | 
| Conread position: | 101-188 | 
| Cow position: | chr6:48811689-48811601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 89 | 
| Alignm identity: | 83 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 101-200 | 
| Cow position: | chr6:6671412-6671512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 101 | 
| Alignm identity: | 85 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 101-289 | 
| Cow position: | chr6:20605709-20605919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 101-313 | 
| Cow position: | chr6:66057427-66057637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 30, 77 | 
| Conread position: | 101-384 | 
| Cow position: | chr6:21542095-21542402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 101-421 | 
| Cow position: | chr6:130389-130047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 78, 201 | 
| Conread position: | 101-426 | 
| Cow position: | chr6:54600144-54600469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 35 | 
| Conread position: | 101-449 | 
| Cow position: | chr6:60350524-60350145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 101-457 | 
| Cow position: | chr6:66874137-66874503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 126 | 
| Conread position: | 101-475 | 
| Cow position: | chr6:21869870-21869476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 36, 194 | 
| Conread position: | 101-515 | 
| Cow position: | chr6:14201473-14201902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 30, 142 | 
| Conread position: | 101-526 | 
| Cow position: | chr6:66087730-66088164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 30, 94 | 
| Conread position: | 101-528 | 
| Cow position: | chr6:16103427-16102969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 32, 207 | 
| Conread position: | 101-528 | 
| Cow position: | chr6:19401637-19402068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 162 | 
| Conread position: | 101-528 | 
| Cow position: | chr6:29239718-29240155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 195 | 
| Conread position: | 101-528 | 
| Cow position: | chr6:34475768-34475335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 97, 35 | 
| Conread position: | 101-528 | 
| Cow position: | chr6:46865824-46865362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 32, 235 | 
| Conread position: | 101-528 | 
| Cow position: | chr6:60144402-60143976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 93 | 
| Conread position: | 101-528 | 
| Cow position: | chr6:67950734-67951180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 174 | 
| Conread position: | 101-528 | 
| Cow position: | chr6:68376527-68376092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 99 | 
| Conread position: | 102-197 | 
| Cow position: | chr6:59302048-59301953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 97 | 
| Alignm identity: | 84 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 34, 12 | 
| Conread position: | 102-199 | 
| Cow position: | chr6:51398577-51398675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 99 | 
| Alignm identity: | 87 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 102-290 | 
| Cow position: | chr6:388947-389155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 34, 64 | 
| Conread position: | 102-436 | 
| Cow position: | chr6:38018050-38018392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 33, 39 | 
| Conread position: | 103-213 | 
| Cow position: | chr6:50640607-50640721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 115 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 103-360 | 
| Cow position: | chr6:49685362-49685640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 103-502 | 
| Cow position: | chr6:56376570-56376149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 72, 33 | 
| Conread position: | 103-517 | 
| Cow position: | chr6:37148974-37149398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 31 | 
| Conread position: | 103-528 | 
| Cow position: | chr6:24468615-24468176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 197 | 
| Conread position: | 103-528 | 
| Cow position: | chr6:41733404-41733858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 213 | 
| Conread position: | 104-528 | 
| Cow position: | chr6:4383271-4383697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 213 | 
| Conread position: | 104-528 | 
| Cow position: | chr6:38207717-38207263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 217 | 
| Conread position: | 105-313 | 
| Cow position: | chr6:30786369-30786147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 105-434 | 
| Cow position: | chr6:23248184-23247837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 31, 171 | 
| Conread position: | 105-459 | 
| Cow position: | chr6:37783194-37783557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 34, 25 | 
| Conread position: | 105-459 | 
| Cow position: | chr6:68049215-68049574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 94, 193 | 
| Conread position: | 105-522 | 
| Cow position: | chr6:7190340-7189912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 31, 131 | 
| Conread position: | 105-522 | 
| Cow position: | chr6:21737105-21736685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 15, 274 | 
| Conread position: | 105-528 | 
| Cow position: | chr6:7539352-7539796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 136 | 
| Conread position: | 106-197 | 
| Cow position: | chr6:54430599-54430691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 93 | 
| Alignm identity: | 79 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 106-459 | 
| Cow position: | chr6:21110749-21111108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 30, 206 | 
| Conread position: | 106-520 | 
| Cow position: | chr6:55282509-55282075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 60, 102 | 
| Conread position: | 107-197 | 
| Cow position: | chr6:19045167-19045257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 91 | 
| Alignm identity: | 78 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 107-197 | 
| Cow position: | chr6:65846666-65846575 (view UCSC Genome Browser custom track) | 
| Alignm length: | 92 | 
| Alignm identity: | 80 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 107-197 | 
| Cow position: | chr6:67304583-67304673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 91 | 
| Alignm identity: | 80 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 107-216 | 
| Cow position: | chr6:10225895-10225788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 107-238 | 
| Cow position: | chr6:10635958-10636098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 107-327 | 
| Cow position: | chr6:5462267-5462041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 87, 159 | 
| Conread position: | 107-365 | 
| Cow position: | chr6:34031449-34031721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 29, 209 | 
| Conread position: | 107-433 | 
| Cow position: | chr6:45065225-45064889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 25, 158 | 
| Conread position: | 107-458 | 
| Cow position: | chr6:28977250-28976884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 95 | 
| Conread position: | 107-526 | 
| Cow position: | chr6:16746121-16746567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 25, 216 | 
| Conread position: | 107-528 | 
| Cow position: | chr6:15301036-15300617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 185 | 
| Conread position: | 107-528 | 
| Cow position: | chr6:24110085-24110507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 93 | 
| Conread position: | 107-528 | 
| Cow position: | chr6:35435784-35436210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 26, 342 | 
| Conread position: | 107-528 | 
| Cow position: | chr6:36202609-36203044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 170 | 
| Conread position: | 107-528 | 
| Cow position: | chr6:44194764-44194333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 196 | 
| Conread position: | 107-528 | 
| Cow position: | chr6:54490959-54490523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 311 | 
| Conread position: | 107-528 | 
| Cow position: | chr6:66433729-66434177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 304 | 
| Conread position: | 108-309 | 
| Cow position: | chr6:242596-242814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 109-313 | 
| Cow position: | chr6:1510396-1510597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 129, 71 | 
| Conread position: | 109-327 | 
| Cow position: | chr6:17669093-17669315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 22, 81 | 
| Conread position: | 109-460 | 
| Cow position: | chr6:60442202-60442565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 90, 122 | 
| Conread position: | 109-528 | 
| Cow position: | chr6:6460325-6460729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 96, 27 | 
| Conread position: | 109-528 | 
| Cow position: | chr6:8965873-8966311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 27, 32 | 
| Conread position: | 109-528 | 
| Cow position: | chr6:38440965-38441403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 134 | 
| Conread position: | 109-528 | 
| Cow position: | chr6:50090423-50090868 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 27, 210 | 
| Conread position: | 110-460 | 
| Cow position: | chr6:53651824-53652198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 28, 174 | 
| Conread position: | 110-506 | 
| Cow position: | chr6:58304214-58304617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 21, 74 | 
| Conread position: | 110-528 | 
| Cow position: | chr6:53460787-53460348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 349 | 
| Conread position: | 111-235 | 
| Cow position: | chr6:16288633-16288499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 111-235 | 
| Cow position: | chr6:31048721-31048586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 111-528 | 
| Cow position: | chr6:17997530-17997094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 192 | 
| Conread position: | 112-525 | 
| Cow position: | chr6:59620455-59620876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 19, 88 | 
| Conread position: | 113-466 | 
| Cow position: | chr6:31564546-31564174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 23, 11 | 
| Conread position: | 114-459 | 
| Cow position: | chr6:59069840-59069463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 18, 192 | 
| Conread position: | 114-525 | 
| Cow position: | chr6:57405336-57404916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 19, 37 | 
| Conread position: | 114-528 | 
| Cow position: | chr6:53025010-53024588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 22, 89 | 
| Conread position: | 115-348 | 
| Cow position: | chr6:46400616-46400370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 29, 203 | 
| Conread position: | 115-528 | 
| Cow position: | chr6:21456900-21456454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 83, 261 | 
| Conread position: | 117-499 | 
| Cow position: | chr6:45606657-45606260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 84, 29 | 
| Conread position: | 118-479 | 
| Cow position: | chr6:54864874-54864483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 69, 288 | 
| Conread position: | 118-528 | 
| Cow position: | chr6:21231329-21231735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 5 | 
| Conread position: | 119-528 | 
| Cow position: | chr6:19695600-19696032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 225 | 
| Conread position: | 120-467 | 
| Cow position: | chr6:6098488-6098101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 120-521 | 
| Cow position: | chr6:38641292-38641710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 277 | 
| Conread position: | 122-471 | 
| Cow position: | chr6:51463820-51463465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 14, 145 | 
| Conread position: | 122-528 | 
| Cow position: | chr6:63252126-63251698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 79, 201 | 
| Conread position: | 123-463 | 
| Cow position: | chr6:66131105-66131465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 13, 266 | 
| Conread position: | 124-527 | 
| Cow position: | chr6:10400097-10399686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 12, 203 | 
| Conread position: | 125-376 | 
| Cow position: | chr6:46245524-46245265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 127-452 | 
| Cow position: | chr6:8788236-8787887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 9, 189 | 
| Conread position: | 127-527 | 
| Cow position: | chr6:55546359-55545950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 28 | 
| Conread position: | 129-430 | 
| Cow position: | chr6:28318213-28318522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 70, 201 | 
| Conread position: | 129-528 | 
| Cow position: | chr6:12092180-12091763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 129-528 | 
| Cow position: | chr6:63720003-63720415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 346 | 
| Conread position: | 130-373 | 
| Cow position: | chr6:3545509-3545763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 130-436 | 
| Cow position: | chr6:24545422-24545744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 61, 298 | 
| Conread position: | 130-455 | 
| Cow position: | chr6:63299218-63298878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 64, 16 | 
| Conread position: | 130-471 | 
| Cow position: | chr6:16191472-16191840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 59, 14 | 
| Conread position: | 130-479 | 
| Cow position: | chr6:16423504-16423883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 69, 299 | 
| Conread position: | 130-525 | 
| Cow position: | chr6:37467734-37467317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 69, 122 | 
| Conread position: | 130-528 | 
| Cow position: | chr6:6400753-6401188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 59, 265 | 
| Conread position: | 130-528 | 
| Cow position: | chr6:7128597-7128181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 39, 352 | 
| Conread position: | 132-487 | 
| Cow position: | chr6:53519816-53519432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 58, 208 | 
| Conread position: | 132-528 | 
| Cow position: | chr6:21062076-21061668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 62, 259 | 
| Conread position: | 134-528 | 
| Cow position: | chr6:47355633-47356049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 61, 164 | 
| Conread position: | 137-472 | 
| Cow position: | chr6:65259655-65259322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 58, 39 | 
| Conread position: | 137-514 | 
| Cow position: | chr6:47799110-47799503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 360 | 
| Conread position: | 138-528 | 
| Cow position: | chr6:14153058-14152668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 298, 369 | 
| Conread position: | 141-512 | 
| Cow position: | chr6:1703630-1704004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 83, 57 | 
| Conread position: | 142-528 | 
| Cow position: | chr6:12668921-12669321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 157 | 
| Conread position: | 143-528 | 
| Cow position: | chr6:47574723-47575114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 49, 314 | 
| Conread position: | 144-426 | 
| Cow position: | chr6:32518054-32517759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 55, 126 | 
| Conread position: | 149-455 | 
| Cow position: | chr6:19012893-19013216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 53, 259 | 
| Conread position: | 150-509 | 
| Cow position: | chr6:59798493-59798858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 51, 128 | 
| Conread position: | 150-510 | 
| Cow position: | chr6:59104433-59104803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 49, 160 | 
| Conread position: | 150-521 | 
| Cow position: | chr6:8125157-8125545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 98 | 
| Conread position: | 152-528 | 
| Cow position: | chr6:65264708-65264328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 42, 176 | 
| Conread position: | 154-355 | 
| Cow position: | chr6:54287909-54288121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 48, 163 | 
| Conread position: | 154-528 | 
| Cow position: | chr6:33451103-33450754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 150, 76 | 
| Conread position: | 158-478 | 
| Cow position: | chr6:16764809-16764470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 123 | 
| Conread position: | 161-527 | 
| Cow position: | chr6:60783706-60784093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 38, 328 | 
| Conread position: | 162-528 | 
| Cow position: | chr6:14914402-14914011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 207 | 
| Conread position: | 163-506 | 
| Cow position: | chr6:35725947-35726291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 34, 21 | 
| Conread position: | 166-491 | 
| Cow position: | chr6:48112045-48112382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 33, 155 | 
| Conread position: | 173-527 | 
| Cow position: | chr6:19292660-19293020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 25, 35 | 
| Conread position: | 181-528 | 
| Cow position: | chr6:17313605-17313961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 59, 8 | 
| Conread position: | 182-453 | 
| Cow position: | chr6:60667293-60667561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 22, 7 | 
| Conread position: | 182-528 | 
| Cow position: | chr6:21004540-21004903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 55, 7 | 
| Conread position: | 183-527 | 
| Cow position: | chr6:50467008-50467360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 53, 6 | 
| Conread position: | 187-528 | 
| Cow position: | chr6:10225763-10225427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 51, 111 | 
| Conread position: | 189-524 | 
| Cow position: | chr6:22850367-22850033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 46, 86 | 
| Conread position: | 193-366 | 
| Cow position: | chr6:44984211-44984391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 194-430 | 
| Cow position: | chr6:12543050-12542805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 194-430 | 
| Cow position: | chr6:55763737-55763978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 44, 18 | 
| Conread position: | 194-432 | 
| Cow position: | chr6:61608394-61608639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 194-449 | 
| Cow position: | chr6:47640550-47640286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 194-455 | 
| Cow position: | chr6:528390-528131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 243, 85 | 
| Conread position: | 194-478 | 
| Cow position: | chr6:67456596-67456894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 50, 140 | 
| Conread position: | 194-479 | 
| Cow position: | chr6:7989529-7989243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 44, 117 | 
| Conread position: | 194-497 | 
| Cow position: | chr6:8562603-8562910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 42, 198 | 
| Conread position: | 194-502 | 
| Cow position: | chr6:57571360-57571675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 46, 281 | 
| Conread position: | 194-506 | 
| Cow position: | chr6:36189580-36189901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 40, 118 | 
| Conread position: | 194-512 | 
| Cow position: | chr6:27888235-27888554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 42, 18 | 
| Conread position: | 194-518 | 
| Cow position: | chr6:15243139-15243475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 59, 115 | 
| Conread position: | 194-521 | 
| Cow position: | chr6:38640114-38640450 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 60, 278 | 
| Conread position: | 194-523 | 
| Cow position: | chr6:26450204-26450518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 49, 102 | 
| Conread position: | 194-525 | 
| Cow position: | chr6:4692097-4691745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 240 | 
| Conread position: | 194-527 | 
| Cow position: | chr6:60739898-60740232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 133 | 
| Conread position: | 194-528 | 
| Cow position: | chr6:120126-120460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 42, 184 | 
| Conread position: | 194-528 | 
| Cow position: | chr6:5114162-5113824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 44, 93 | 
| Conread position: | 194-528 | 
| Cow position: | chr6:11246646-11246991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 173 | 
| Conread position: | 194-528 | 
| Cow position: | chr6:15447321-15446970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 194-528 | 
| Cow position: | chr6:19446142-19446476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 42, 74 | 
| Conread position: | 194-528 | 
| Cow position: | chr6:31847337-31847021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 37, 127 | 
| Conread position: | 194-528 | 
| Cow position: | chr6:38609851-38610197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 42, 116 | 
| Conread position: | 194-528 | 
| Cow position: | chr6:51581370-51581032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 27, 93 | 
| Conread position: | 194-528 | 
| Cow position: | chr6:57546331-57546006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 89, 42 | 
| Conread position: | 194-528 | 
| Cow position: | chr6:60118031-60118365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 44, 113 | 
| Conread position: | 195-477 | 
| Cow position: | chr6:37199651-37199365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 41, 196 | 
| Conread position: | 195-518 | 
| Cow position: | chr6:19264612-19264285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 40, 118 | 
| Conread position: | 197-402 | 
| Cow position: | chr6:54365109-54364895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 83, 23 | 
| Conread position: | 197-527 | 
| Cow position: | chr6:16261679-16262003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 39, 15 | 
| Conread position: | 198-506 | 
| Cow position: | chr6:67323203-67323507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 38, 75 | 
| Conread position: | 198-528 | 
| Cow position: | chr6:23402102-23401772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 40, 127 | 
| Conread position: | 198-528 | 
| Cow position: | chr6:30123305-30122944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 198-528 | 
| Cow position: | chr6:32287525-32287854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 36, 254 | 
| Conread position: | 198-528 | 
| Cow position: | chr6:44566303-44566649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 37, 119 | 
| Conread position: | 198-528 | 
| Cow position: | chr6:45388217-45388544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 40, 112 | 
| Conread position: | 198-528 | 
| Cow position: | chr6:48010634-48010301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 37, 107 | 
| Conread position: | 198-528 | 
| Cow position: | chr6:54854136-54854473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 166, 84 | 
| Conread position: | 199-475 | 
| Cow position: | chr6:21234932-21235216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 37, 86 | 
| Conread position: | 199-506 | 
| Cow position: | chr6:46274232-46273929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 87, 15 | 
| Conread position: | 199-524 | 
| Cow position: | chr6:52412746-52413081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 35, 117 | 
| Conread position: | 199-524 | 
| Cow position: | chr6:55209444-55209779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 37, 126 | 
| Conread position: | 199-528 | 
| Cow position: | chr6:6965499-6965172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 27, 69 | 
| Conread position: | 199-528 | 
| Cow position: | chr6:10039609-10039949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 81 | 
| Conread position: | 199-528 | 
| Cow position: | chr6:19755185-19754855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 36, 54 | 
| Conread position: | 199-528 | 
| Cow position: | chr6:25615214-25614867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 37, 19 | 
| Conread position: | 199-528 | 
| Cow position: | chr6:50577412-50577738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 41, 114 | 
| Conread position: | 200-471 | 
| Cow position: | chr6:582382-582104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 193 | 
| Conread position: | 200-524 | 
| Cow position: | chr6:54036246-54035921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 53, 99 | 
| Conread position: | 201-473 | 
| Cow position: | chr6:30973942-30974207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 37, 71 | 
| Conread position: | 201-528 | 
| Cow position: | chr6:17557271-17557598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 34, 113 | 
| Conread position: | 201-528 | 
| Cow position: | chr6:59603317-59602992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 46, 236 | 
| Conread position: | 204-528 | 
| Cow position: | chr6:43345553-43345217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 32, 268 | 
| Conread position: | 205-512 | 
| Cow position: | chr6:50984119-50984432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 103 | 
| Conread position: | 205-527 | 
| Cow position: | chr6:62669765-62670093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 100 | 
| Conread position: | 205-528 | 
| Cow position: | chr6:19996512-19996838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 33, 87 | 
| Conread position: | 205-528 | 
| Cow position: | chr6:52478514-52478188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 5, 30 | 
| Conread position: | 206-463 | 
| Cow position: | chr6:16316200-16316477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 206-521 | 
| Cow position: | chr6:6724402-6724725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 17, 12 | 
| Conread position: | 206-528 | 
| Cow position: | chr6:33206642-33206952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 41, 30 | 
| Conread position: | 206-528 | 
| Cow position: | chr6:59718691-59719034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 28, 179 | 
| Conread position: | 207-528 | 
| Cow position: | chr6:7119714-7119407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 48, 63 | 
| Conread position: | 208-497 | 
| Cow position: | chr6:58370650-58370939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 26, 191 | 
| Conread position: | 208-527 | 
| Cow position: | chr6:60274109-60273788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 45, 14 | 
| Conread position: | 209-497 | 
| Cow position: | chr6:17794858-17794567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 37, 72 | 
| Conread position: | 211-452 | 
| Cow position: | chr6:20196393-20196153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 31, 74 | 
| Conread position: | 211-458 | 
| Cow position: | chr6:1429539-1429795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 27, 41 | 
| Conread position: | 211-524 | 
| Cow position: | chr6:40049976-40050297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 72, 11 | 
| Conread position: | 212-484 | 
| Cow position: | chr6:3592309-3592579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 71, 21 | 
| Conread position: | 212-491 | 
| Cow position: | chr6:17549080-17548777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 24, 251 | 
| Conread position: | 216-528 | 
| Cow position: | chr6:5330324-5330637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 37 | 
| Conread position: | 221-490 | 
| Cow position: | chr6:1371313-1371038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 15, 208 | 
| Conread position: | 225-524 | 
| Cow position: | chr6:48988358-48988653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 11, 82 | 
| Conread position: | 230-512 | 
| Cow position: | chr6:17068725-17068445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 55, 82 | 
| Conread position: | 232-430 | 
| Cow position: | chr6:377056-377250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 137, 48 | 
| Conread position: | 232-528 | 
| Cow position: | chr6:694221-693922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 217, 48 | 
| Conread position: | 232-528 | 
| Cow position: | chr6:22985932-22985639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 55, 210 | 
| Conread position: | 232-528 | 
| Cow position: | chr6:23353479-23353779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 52, 77 | 
| Conread position: | 233-435 | 
| Cow position: | chr6:20206203-20206405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 5, 76 | 
| Conread position: | 233-478 | 
| Cow position: | chr6:36284169-36284417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 53, 79 | 
| Conread position: | 233-516 | 
| Cow position: | chr6:22525259-22525537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 50, 88 | 
| Conread position: | 233-518 | 
| Cow position: | chr6:8599932-8600221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 50, 72 | 
| Conread position: | 233-528 | 
| Cow position: | chr6:41375697-41375993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 52, 154 | 
| Conread position: | 235-458 | 
| Cow position: | chr6:66375401-66375177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 50, 71 | 
| Conread position: | 235-499 | 
| Cow position: | chr6:17334124-17333856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 48, 91 | 
| Conread position: | 235-506 | 
| Cow position: | chr6:21514684-21514405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 47, 264 | 
| Conread position: | 235-509 | 
| Cow position: | chr6:17817053-17816787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 117, 47 | 
| Conread position: | 235-521 | 
| Cow position: | chr6:54208208-54207916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 235-525 | 
| Cow position: | chr6:16266651-16266949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 235-527 | 
| Cow position: | chr6:10332161-10331876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 47, 59 | 
| Conread position: | 235-527 | 
| Cow position: | chr6:13565013-13565308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 50, 139 | 
| Conread position: | 235-527 | 
| Cow position: | chr6:21399821-21399532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 202, 47 | 
| Conread position: | 235-528 | 
| Cow position: | chr6:4468697-4468989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 69 | 
| Conread position: | 235-528 | 
| Cow position: | chr6:16288123-16287844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 48, 77 | 
| Conread position: | 235-528 | 
| Cow position: | chr6:33509719-33510012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 45, 69 | 
| Conread position: | 235-528 | 
| Cow position: | chr6:46173323-46173035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 45, 67 | 
| Conread position: | 236-478 | 
| Cow position: | chr6:35993516-35993759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 202, 46 | 
| Conread position: | 236-527 | 
| Cow position: | chr6:3595721-3596016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 72, 84 | 
| Conread position: | 236-528 | 
| Cow position: | chr6:19045556-19045851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 49, 71 | 
| Conread position: | 236-528 | 
| Cow position: | chr6:37462952-37463228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 95, 36 | 
| Conread position: | 236-528 | 
| Cow position: | chr6:60516758-60517061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 142, 24 | 
| Conread position: | 237-472 | 
| Cow position: | chr6:61142633-61142391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 237-523 | 
| Cow position: | chr6:43135005-43134722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 200, 42 | 
| Conread position: | 237-527 | 
| Cow position: | chr6:20157262-20157557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 48, 248 | 
| Conread position: | 237-527 | 
| Cow position: | chr6:55205381-55205085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 26, 44 | 
| Conread position: | 237-528 | 
| Cow position: | chr6:18118121-18117828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 48, 147 | 
| Conread position: | 237-528 | 
| Cow position: | chr6:24339215-24339512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 47, 15 | 
| Conread position: | 238-462 | 
| Cow position: | chr6:11830127-11830347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 47, 60 | 
| Conread position: | 238-515 | 
| Cow position: | chr6:67643759-67643479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 48, 233 | 
| Conread position: | 238-528 | 
| Cow position: | chr6:9302784-9302500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 16, 42 | 
| Conread position: | 238-528 | 
| Cow position: | chr6:22215536-22215239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 39, 100 | 
| Conread position: | 238-528 | 
| Cow position: | chr6:62371243-62370964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 23, 75 | 
| Conread position: | 239-525 | 
| Cow position: | chr6:9718987-9718697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 49, 122 | 
| Conread position: | 239-528 | 
| Cow position: | chr6:37395475-37395180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 237 | 
| Conread position: | 240-528 | 
| Cow position: | chr6:12964788-12965077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 197, 20 | 
| Conread position: | 240-528 | 
| Cow position: | chr6:28559465-28559763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 78, 16 | 
| Conread position: | 241-525 | 
| Cow position: | chr6:2153657-2153377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 42, 22 | 
| Conread position: | 241-527 | 
| Cow position: | chr6:44867605-44867324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 43, 80 | 
| Conread position: | 242-512 | 
| Cow position: | chr6:60468173-60468443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 45, 186 | 
| Conread position: | 242-528 | 
| Cow position: | chr6:24536606-24536303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 247-516 | 
| Cow position: | chr6:51530245-51529974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 36, 60 | 
| Conread position: | 247-528 | 
| Cow position: | chr6:23025172-23024875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 248-477 | 
| Cow position: | chr6:18144135-18144372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 124, 31 | 
| Conread position: | 249-528 | 
| Cow position: | chr6:35319188-35318910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 188, 46 | 
| Conread position: | 251-528 | 
| Cow position: | chr6:56986700-56986425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 36, 61 | 
| Conread position: | 253-527 | 
| Cow position: | chr6:18608868-18608588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 30, 65 | 
| Conread position: | 255-506 | 
| Cow position: | chr6:16640707-16640958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 43, 38 | 
| Conread position: | 256-495 | 
| Cow position: | chr6:68652403-68652162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 27, 214 | 
| Conread position: | 257-478 | 
| Cow position: | chr6:19131380-19131606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 257-528 | 
| Cow position: | chr6:68816117-68816393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 33, 93 | 
| Conread position: | 258-507 | 
| Cow position: | chr6:31078920-31078666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 24, 50 | 
| Conread position: | 259-527 | 
| Cow position: | chr6:2078867-2078594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 26, 207 | 
| Conread position: | 263-528 | 
| Cow position: | chr6:55417570-55417310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 21, 49 | 
| Conread position: | 263-528 | 
| Cow position: | chr6:62437371-62437640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 23, 33 | 
| Conread position: | 270-528 | 
| Cow position: | chr6:47245750-47246005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 165, 25 | 
| Conread position: | 270-528 | 
| Cow position: | chr6:47958776-47959028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 17, 102 | 
| Conread position: | 271-528 | 
| Cow position: | chr6:15587627-15587369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 7, 47 | 
| Conread position: | 272-528 | 
| Cow position: | chr6:8094325-8094063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 11, 161 | 
| Conread position: | 279-528 | 
| Cow position: | chr6:2584915-2585164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 38, 187 | 
| Conread position: | 282-491 | 
| Cow position: | chr6:51086047-51086252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 282-524 | 
| Cow position: | chr6:47778850-47779097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 40, 25 | 
| Conread position: | 282-528 | 
| Cow position: | chr6:3329964-3330219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 282-528 | 
| Cow position: | chr6:41015000-41014751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 155, 25 | 
| Conread position: | 282-528 | 
| Cow position: | chr6:57089173-57089427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 40, 184 | 
| Conread position: | 283-499 | 
| Cow position: | chr6:55502743-55502967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 283-528 | 
| Cow position: | chr6:53546013-53546252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 149, 176 | 
| Conread position: | 284-512 | 
| Cow position: | chr6:67451394-67451161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 284-521 | 
| Cow position: | chr6:36920996-36920759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 42, 65 | 
| Conread position: | 284-528 | 
| Cow position: | chr6:21293518-21293275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 28, 65 | 
| Conread position: | 284-528 | 
| Cow position: | chr6:26155130-26155370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 150, 26 | 
| Conread position: | 284-528 | 
| Cow position: | chr6:47540868-47540617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 80, 15 | 
| Conread position: | 284-528 | 
| Cow position: | chr6:61109769-61110005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 18, 24 | 
| Conread position: | 286-528 | 
| Cow position: | chr6:42567472-42567719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 287-528 | 
| Cow position: | chr6:35727823-35728072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 35, 233 | 
| Conread position: | 288-524 | 
| Cow position: | chr6:24183573-24183337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 149, 21 | 
| Conread position: | 290-516 | 
| Cow position: | chr6:1103752-1103529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 145, 29 | 
| Conread position: | 296-528 | 
| Cow position: | chr6:27219169-27219389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 27, 53 | 
| Conread position: | 299-528 | 
| Cow position: | chr6:48379622-48379388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 301-528 | 
| Cow position: | chr6:66590077-66590295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 16, 106 | 
| Conread position: | 302-524 | 
| Cow position: | chr6:58459717-58459936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 20, 163 | 
| Conread position: | 305-528 | 
| Cow position: | chr6:30023884-30024100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 9, 156 | 
| Conread position: | 307-528 | 
| Cow position: | chr6:48097601-48097380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 52, 7 | 
| Conread position: | 308-524 | 
| Cow position: | chr6:13653356-13653564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 126, 63 | 
| Conread position: | 310-528 | 
| Cow position: | chr6:60850706-60850922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 124, 21 | 
| Conread position: | 311-528 | 
| Cow position: | chr6:63065832-63066060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 82, 136 | 
| Conread position: | 312-528 | 
| Cow position: | chr6:8369430-8369647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 5, 73 | 
| Conread position: | 312-528 | 
| Cow position: | chr6:58725377-58725590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 122, 79 | 
| Conread position: | 312-528 | 
| Cow position: | chr6:62078930-62079141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 125, 30 | 
| Conread position: | 316-528 | 
| Cow position: | chr6:8688837-8688627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 10, 145 | 
| Conread position: | 317-506 | 
| Cow position: | chr6:8365823-8366015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 317-526 | 
| Cow position: | chr6:64429183-64428973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 120, 8 | 
| Conread position: | 318-528 | 
| Cow position: | chr6:12761292-12761503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 116, 90 | 
| Conread position: | 321-499 | 
| Cow position: | chr6:14063293-14063105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 321-523 | 
| Cow position: | chr6:12928162-12928358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 116, 47 | 
| Conread position: | 321-524 | 
| Cow position: | chr6:30502108-30501906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 116, 54 | 
| Conread position: | 321-524 | 
| Cow position: | chr6:53145667-53145461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 116, 0 | 
| Conread position: | 321-524 | 
| Cow position: | chr6:66947802-66947604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 116, 54 | 
| Conread position: | 321-525 | 
| Cow position: | chr6:17704847-17705054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 116, 0 | 
| Conread position: | 321-526 | 
| Cow position: | chr6:67728391-67728599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 116, 0 | 
| Conread position: | 321-527 | 
| Cow position: | chr6:1871182-1870975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 110, 143 | 
| Conread position: | 321-527 | 
| Cow position: | chr6:47782877-47783089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 116, 0 | 
| Conread position: | 321-527 | 
| Cow position: | chr6:50504472-50504678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 17, 26 | 
| Conread position: | 321-528 | 
| Cow position: | chr6:1866748-1866954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 113, 26 | 
| Conread position: | 321-528 | 
| Cow position: | chr6:1941816-1941611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 76, 60 | 
| Conread position: | 321-528 | 
| Cow position: | chr6:3351044-3351251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 106, 139 | 
| Conread position: | 321-528 | 
| Cow position: | chr6:10105963-10105760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 115, 144 | 
| Conread position: | 321-528 | 
| Cow position: | chr6:12623531-12623732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 113, 83 | 
| Conread position: | 321-528 | 
| Cow position: | chr6:21470413-21470209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 112, 137 | 
| Conread position: | 321-528 | 
| Cow position: | chr6:23110184-23109968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 321-528 | 
| Cow position: | chr6:37827937-37827724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 43, 74 | 
| Conread position: | 321-528 | 
| Cow position: | chr6:42034788-42034993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 106, 145 | 
| Conread position: | 321-528 | 
| Cow position: | chr6:48435851-48436053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 116, 7 | 
| Conread position: | 321-528 | 
| Cow position: | chr6:54831492-54831701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 118, 0 | 
| Conread position: | 321-528 | 
| Cow position: | chr6:57079439-57079649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 116, 0 | 
| Conread position: | 321-528 | 
| Cow position: | chr6:61681093-61681301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 17, 27 | 
| Conread position: | 321-528 | 
| Cow position: | chr6:65535155-65534945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 116, 0 | 
| Conread position: | 322-509 | 
| Cow position: | chr6:31865115-31865299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 115, 29 | 
| Conread position: | 322-527 | 
| Cow position: | chr6:54846262-54846054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 115, 0 | 
| Conread position: | 322-528 | 
| Cow position: | chr6:21475744-21475948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 115, 148 | 
| Conread position: | 322-528 | 
| Cow position: | chr6:32453402-32453612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 115, 101 | 
| Conread position: | 322-528 | 
| Cow position: | chr6:36809191-36808979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 322-528 | 
| Cow position: | chr6:55297078-55296869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 113, 0 | 
| Conread position: | 323-527 | 
| Cow position: | chr6:47648218-47648012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 112, 0 | 
| Conread position: | 323-528 | 
| Cow position: | chr6:37692769-37692972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 27, 35 | 
| Conread position: | 324-512 | 
| Cow position: | chr6:67069796-67069605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 81, 24 | 
| Conread position: | 324-528 | 
| Cow position: | chr6:28089029-28088824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 113, 159 | 
| Conread position: | 324-528 | 
| Cow position: | chr6:50771340-50771138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 113, 44 | 
| Conread position: | 328-478 | 
| Cow position: | chr6:21066861-21066707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 328-528 | 
| Cow position: | chr6:33150269-33150071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 99, 124 | 
| Conread position: | 328-528 | 
| Cow position: | chr6:42483438-42483638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 109, 47 | 
| Conread position: | 328-528 | 
| Cow position: | chr6:54127790-54127598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 109, 80 | 
| Conread position: | 329-527 | 
| Cow position: | chr6:16090927-16091119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 105, 122 | 
| Conread position: | 330-528 | 
| Cow position: | chr6:67574412-67574613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 19, 67 | 
| Conread position: | 331-528 | 
| Cow position: | chr6:42728671-42728869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 104, 172 | 
| Conread position: | 335-528 | 
| Cow position: | chr6:66259759-66259960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 102, 187 | 
| Conread position: | 336-515 | 
| Cow position: | chr6:16380575-16380757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 338-528 | 
| Cow position: | chr6:3936817-3937010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 97, 34 | 
| Conread position: | 339-489 | 
| Cow position: | chr6:8731442-8731599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 25, 87 | 
| Conread position: | 339-509 | 
| Cow position: | chr6:21467230-21467061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 98, 30 | 
| Conread position: | 339-528 | 
| Cow position: | chr6:22876897-22876705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 339-528 | 
| Cow position: | chr6:51933588-51933762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 97, 41 | 
| Conread position: | 340-499 | 
| Cow position: | chr6:8468700-8468858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 97, 140 | 
| Conread position: | 340-528 | 
| Cow position: | chr6:48792806-48793003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 343-527 | 
| Cow position: | chr6:36537322-36537141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 91, 7 | 
| Conread position: | 343-528 | 
| Cow position: | chr6:23058249-23058437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 344-528 | 
| Cow position: | chr6:34380776-34380593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 93, 67 | 
| Conread position: | 346-527 | 
| Cow position: | chr6:55044601-55044419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 91, 170 | 
| Conread position: | 347-475 | 
| Cow position: | chr6:28900368-28900499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 85, 0 | 
| Conread position: | 347-515 | 
| Cow position: | chr6:24491070-24491244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 49, 127 | 
| Conread position: | 347-528 | 
| Cow position: | chr6:6614662-6614848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 26, 76 | 
| Conread position: | 347-528 | 
| Cow position: | chr6:15058418-15058598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 90, 133 | 
| Conread position: | 347-528 | 
| Cow position: | chr6:24776180-24776361 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 90, 107 | 
| Conread position: | 347-528 | 
| Cow position: | chr6:34569449-34569639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 347-528 | 
| Cow position: | chr6:53711444-53711626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 90, 107 | 
| Conread position: | 347-528 | 
| Cow position: | chr6:62724597-62724781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 348-477 | 
| Cow position: | chr6:62478827-62478695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 348-515 | 
| Cow position: | chr6:36225151-36225320 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 89, 106 | 
| Conread position: | 348-528 | 
| Cow position: | chr6:13742031-13742210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 89, 60 | 
| Conread position: | 348-528 | 
| Cow position: | chr6:15974477-15974300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 89, 29 | 
| Conread position: | 348-528 | 
| Cow position: | chr6:19563441-19563256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 348-528 | 
| Cow position: | chr6:55548491-55548311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 88, 119 | 
| Conread position: | 348-528 | 
| Cow position: | chr6:59101279-59101096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 349-478 | 
| Cow position: | chr6:107381-107248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 349-527 | 
| Cow position: | chr6:44540850-44541026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 11, 98 | 
| Conread position: | 349-528 | 
| Cow position: | chr6:39356155-39356337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 21, 164 | 
| Conread position: | 349-528 | 
| Cow position: | chr6:44544106-44543924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 11, 107 | 
| Conread position: | 350-528 | 
| Cow position: | chr6:21184178-21184000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 87, 67 | 
| Conread position: | 350-528 | 
| Cow position: | chr6:25773171-25772996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 84, 29 | 
| Conread position: | 350-528 | 
| Cow position: | chr6:50883633-50883455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 11, 112 | 
| Conread position: | 353-528 | 
| Cow position: | chr6:8187142-8186964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 353-528 | 
| Cow position: | chr6:26408455-26408279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 84, 16 | 
| Conread position: | 354-499 | 
| Cow position: | chr6:58076442-58076590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 354-509 | 
| Cow position: | chr6:69153458-69153616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 354-512 | 
| Cow position: | chr6:30895943-30895783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 83, 100 | 
| Conread position: | 354-527 | 
| Cow position: | chr6:54820880-54821056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 355-527 | 
| Cow position: | chr6:26054855-26054678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 355-528 | 
| Cow position: | chr6:16411664-16411836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 82, 20 | 
| Conread position: | 355-528 | 
| Cow position: | chr6:45160008-45159832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 356-527 | 
| Cow position: | chr6:61644808-61644634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 356-528 | 
| Cow position: | chr6:35985086-35984911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 357-528 | 
| Cow position: | chr6:62805694-62805868 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 358-528 | 
| Cow position: | chr6:60186610-60186431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 360-527 | 
| Cow position: | chr6:58697577-58697407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 361-528 | 
| Cow position: | chr6:57467652-57467822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 363-519 | 
| Cow position: | chr6:18440420-18440261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 363-528 | 
| Cow position: | chr6:14263833-14263666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 31, 56 | 
| Conread position: | 363-528 | 
| Cow position: | chr6:21052392-21052223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 363-528 | 
| Cow position: | chr6:28562111-28561945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 363-528 | 
| Cow position: | chr6:30983577-30983737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 103, 71 | 
| Conread position: | 363-528 | 
| Cow position: | chr6:32006397-32006233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 71, 104 | 
| Conread position: | 363-528 | 
| Cow position: | chr6:32336088-32336262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 363-528 | 
| Cow position: | chr6:36938925-36939097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 363-528 | 
| Cow position: | chr6:49685876-49686043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 74, 25 | 
| Conread position: | 363-528 | 
| Cow position: | chr6:55014936-55015106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 74, 158 | 
| Conread position: | 363-528 | 
| Cow position: | chr6:57299816-57299993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 363-528 | 
| Cow position: | chr6:59297110-59297268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 363-528 | 
| Cow position: | chr6:66293542-66293706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 74, 148 | 
| Conread position: | 366-513 | 
| Cow position: | chr6:35342121-35341974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 15, 99 | 
| Conread position: | 370-528 | 
| Cow position: | chr6:14471427-14471588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 370-528 | 
| Cow position: | chr6:16137706-16137544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 370-528 | 
| Cow position: | chr6:43906619-43906458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 370-528 | 
| Cow position: | chr6:53811647-53811809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 372-524 | 
| Cow position: | chr6:33290035-33290191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 372-528 | 
| Cow position: | chr6:14150313-14150158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 65, 139 | 
| Conread position: | 376-528 | 
| Cow position: | chr6:8726747-8726900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 5, 79 | 
| Conread position: | 379-519 | 
| Cow position: | chr6:62224495-62224638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 56, 115 | 
| Conread position: | 381-527 | 
| Cow position: | chr6:53732057-53732207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 381-528 | 
| Cow position: | chr6:19936494-19936345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 381-528 | 
| Cow position: | chr6:24903502-24903352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 383-528 | 
| Cow position: | chr6:54840430-54840277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 386-527 | 
| Cow position: | chr6:67374596-67374455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 51, 69 | 
| Conread position: | 388-527 | 
| Cow position: | chr6:39414905-39415047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 10, 89 | 
| Conread position: | 388-528 | 
| Cow position: | chr6:54889682-54889827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 389-528 | 
| Cow position: | chr6:54406716-54406580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 45, 71 | 
| Conread position: | 393-528 | 
| Cow position: | chr6:31928724-31928862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 393-528 | 
| Cow position: | chr6:38032945-38033081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 41, 67 | 
| Conread position: | 394-524 | 
| Cow position: | chr6:5445755-5445887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 43, 60 | 
| Conread position: | 394-528 | 
| Cow position: | chr6:54828234-54828097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 394-528 | 
| Cow position: | chr6:57935484-57935353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 43, 16 | 
| Conread position: | 395-528 | 
| Cow position: | chr6:16016123-16016258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 397-528 | 
| Cow position: | chr6:15111750-15111612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 400-528 | 
| Cow position: | chr6:23381574-23381443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 404-528 | 
| Cow position: | chr6:30688413-30688286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 408-528 | 
| Cow position: | chr6:57143594-57143471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 29, 0 | 
Show alignments to all cow chromosomes.
