Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rnbm29b_l4.5
        

               Conread position:
               103-408
               

               Cow position:
               chr25:448332-448637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               274, 173
               

               Conread position:
               136-313
               

               Cow position:
               chr25:32453421-32453591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               137-373
               

               Cow position:
               chr25:6815222-6814998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 41
               

               Conread position:
               138-374
               

               Cow position:
               chr25:36026986-36026753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               138-386
               

               Cow position:
               chr25:35625206-35625438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               238, 47
               

               Conread position:
               138-407
               

               Cow position:
               chr25:20651249-20650975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               216, 0
               

               Conread position:
               139-277
               

               Cow position:
               chr25:8485516-8485656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               139-288
               

               Cow position:
               chr25:31704978-31704821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               139-305
               

               Cow position:
               chr25:18894744-18894908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               139-312
               

               Cow position:
               chr25:17342432-17342257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               139-312
               

               Cow position:
               chr25:26134017-26133846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               6, 23
               

               Conread position:
               139-313
               

               Cow position:
               chr25:13672370-13672195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               139-318
               

               Cow position:
               chr25:7750427-7750252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               13, 65
               

               Conread position:
               139-325
               

               Cow position:
               chr25:8157528-8157715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               13, 104
               

               Conread position:
               139-326
               

               Cow position:
               chr25:13272545-13272363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               139-329
               

               Cow position:
               chr25:13736338-13736520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               139-330
               

               Cow position:
               chr25:26089837-26090025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               8, 57
               

               Conread position:
               139-335
               

               Cow position:
               chr25:12899733-12899540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               139-347
               

               Cow position:
               chr25:10218070-10218278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               15, 151
               

               Conread position:
               139-358
               

               Cow position:
               chr25:15286565-15286778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               139-359
               

               Cow position:
               chr25:7329524-7329305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 56
               

               Conread position:
               139-364
               

               Cow position:
               chr25:18988365-18988132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               139-367
               

               Cow position:
               chr25:36746472-36746692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               139-370
               

               Cow position:
               chr25:12293772-12294001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               95, 17
               

               Conread position:
               139-370
               

               Cow position:
               chr25:20211105-20211336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               153, 46
               

               Conread position:
               139-372
               

               Cow position:
               chr25:24669458-24669682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               18, 100
               

               Conread position:
               139-374
               

               Cow position:
               chr25:15377298-15377079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               139-375
               

               Cow position:
               chr25:8918301-8918533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 63
               

               Conread position:
               139-375
               

               Cow position:
               chr25:35345006-35344783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               20, 58
               

               Conread position:
               139-378
               

               Cow position:
               chr25:19129831-19129594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               15, 100
               

               Conread position:
               139-385
               

               Cow position:
               chr25:24452200-24452434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               16, 58
               

               Conread position:
               139-385
               

               Cow position:
               chr25:35347879-35347640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               139-387
               

               Cow position:
               chr25:37594381-37594146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               7, 62
               

               Conread position:
               139-388
               

               Cow position:
               chr25:11131558-11131316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               139-388
               

               Cow position:
               chr25:18453106-18452855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               101, 75
               

               Conread position:
               139-388
               

               Cow position:
               chr25:20785611-20785852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               239, 19
               

               Conread position:
               139-388
               

               Cow position:
               chr25:33978238-33978470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               10, 69
               

               Conread position:
               139-388
               

               Cow position:
               chr25:40321321-40321561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               237, 82
               

               Conread position:
               139-389
               

               Cow position:
               chr25:12824043-12824285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 121
               

               Conread position:
               139-391
               

               Cow position:
               chr25:9596605-9596354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               238, 24
               

               Conread position:
               139-398
               

               Cow position:
               chr25:1096546-1096298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               237, 33
               

               Conread position:
               139-398
               

               Cow position:
               chr25:7801116-7800857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               139-398
               

               Cow position:
               chr25:8120758-8120498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               139-398
               

               Cow position:
               chr25:8347486-8347230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 125
               

               Conread position:
               139-398
               

               Cow position:
               chr25:17658586-17658336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 68
               

               Conread position:
               139-398
               

               Cow position:
               chr25:24573043-24572793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               66, 43
               

               Conread position:
               139-398
               

               Cow position:
               chr25:26654886-26654628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 121
               

               Conread position:
               139-406
               

               Cow position:
               chr25:9957062-9957324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 129
               

               Conread position:
               139-406
               

               Cow position:
               chr25:10504361-10504626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               139-406
               

               Cow position:
               chr25:22531258-22530997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               16, 46
               

               Conread position:
               139-406
               

               Cow position:
               chr25:27939820-27940090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               56, 134
               

               Conread position:
               139-407
               

               Cow position:
               chr25:788239-787981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               237, 61
               

               Conread position:
               139-407
               

               Cow position:
               chr25:10643333-10643599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 44
               

               Conread position:
               139-407
               

               Cow position:
               chr25:14118070-14117818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               139-407
               

               Cow position:
               chr25:14791732-14791465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 100
               

               Conread position:
               139-407
               

               Cow position:
               chr25:18721145-18721399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 9
               

               Conread position:
               139-407
               

               Cow position:
               chr25:20076469-20076206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               73, 79
               

               Conread position:
               139-407
               

               Cow position:
               chr25:20395167-20394916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               238, 17
               

               Conread position:
               139-407
               

               Cow position:
               chr25:25754023-25754286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 10
               

               Conread position:
               139-407
               

               Cow position:
               chr25:29383348-29383618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               237, 10
               

               Conread position:
               139-407
               

               Cow position:
               chr25:30279233-30279499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               13, 71
               

               Conread position:
               139-408
               

               Cow position:
               chr25:35340305-35340043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               139-413
               

               Cow position:
               chr25:5514989-5514712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 222
               

               Conread position:
               139-413
               

               Cow position:
               chr25:6470239-6470513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               21, 118
               

               Conread position:
               139-413
               

               Cow position:
               chr25:12239171-12239434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               72, 89
               

               Conread position:
               139-413
               

               Cow position:
               chr25:36779473-36779199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 187
               

               Conread position:
               139-414
               

               Cow position:
               chr25:2136334-2136061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               15, 71
               

               Conread position:
               140-259
               

               Cow position:
               chr25:12997569-12997449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               140-261
               

               Cow position:
               chr25:32587904-32588024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               140-294
               

               Cow position:
               chr25:20047479-20047328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               94, 24
               

               Conread position:
               140-388
               

               Cow position:
               chr25:8512113-8512360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               21, 90
               

               Conread position:
               140-388
               

               Cow position:
               chr25:38135722-38135478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               220, 97
               

               Conread position:
               140-396
               

               Cow position:
               chr25:27594272-27594026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               216, 13
               

               Conread position:
               140-407
               

               Cow position:
               chr25:2126441-2126178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               236, 69
               

               Conread position:
               140-407
               

               Cow position:
               chr25:16319168-16319417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               6, 22
               

               Conread position:
               140-413
               

               Cow position:
               chr25:40658278-40658007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               12, 35
               

               Conread position:
               140-414
               

               Cow position:
               chr25:2046585-2046849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               212, 16
               

               Conread position:
               141-301
               

               Cow position:
               chr25:5920916-5920753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               141-375
               

               Cow position:
               chr25:33550482-33550251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               141-380
               

               Cow position:
               chr25:19679317-19679081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 20
               

               Conread position:
               141-381
               

               Cow position:
               chr25:9961196-9961440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               141-386
               

               Cow position:
               chr25:6885999-6886244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               93, 23
               

               Conread position:
               141-388
               

               Cow position:
               chr25:5836991-5837235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               236, 68
               

               Conread position:
               141-388
               

               Cow position:
               chr25:10012070-10012318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               141-389
               

               Cow position:
               chr25:14196834-14196585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 96
               

               Conread position:
               141-392
               

               Cow position:
               chr25:30035521-30035279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               141-393
               

               Cow position:
               chr25:40151369-40151125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               236, 35
               

               Conread position:
               141-398
               

               Cow position:
               chr25:41364011-41364258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               176, 90
               

               Conread position:
               141-399
               

               Cow position:
               chr25:41385128-41385385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               176, 89
               

               Conread position:
               141-405
               

               Cow position:
               chr25:13333401-13333134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               20, 99
               

               Conread position:
               141-406
               

               Cow position:
               chr25:25051406-25051674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 99
               

               Conread position:
               141-407
               

               Cow position:
               chr25:4547745-4548006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               141-407
               

               Cow position:
               chr25:11585491-11585220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 88
               

               Conread position:
               141-407
               

               Cow position:
               chr25:15694955-15694692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               10, 42
               

               Conread position:
               141-407
               

               Cow position:
               chr25:26087492-26087224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 24
               

               Conread position:
               141-416
               

               Cow position:
               chr25:6464057-6464330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               93, 122
               

               Conread position:
               142-326
               

               Cow position:
               chr25:16714297-16714480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               109, 42
               

               Conread position:
               142-392
               

               Cow position:
               chr25:14513086-14512843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               13, 97
               

               Conread position:
               142-397
               

               Cow position:
               chr25:10365779-10366030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 42
               

               Conread position:
               142-398
               

               Cow position:
               chr25:22315171-22314922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               232, 12
               

               Conread position:
               142-407
               

               Cow position:
               chr25:9847763-9847493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               142-407
               

               Cow position:
               chr25:18155574-18155305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               9, 87
               

               Conread position:
               142-407
               

               Cow position:
               chr25:20069696-20069433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               234, 31
               

               Conread position:
               142-407
               

               Cow position:
               chr25:26618429-26618162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               232, 7
               

               Conread position:
               142-413
               

               Cow position:
               chr25:13708987-13708720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               234, 135
               

               Conread position:
               142-413
               

               Cow position:
               chr25:23053532-23053259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 31
               

               Conread position:
               143-307
               

               Cow position:
               chr25:4681205-4681046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 62
               

               Conread position:
               143-348
               

               Cow position:
               chr25:36033412-36033208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               17, 96
               

               Conread position:
               143-387
               

               Cow position:
               chr25:38982074-38981845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               233, 10
               

               Conread position:
               143-398
               

               Cow position:
               chr25:14224831-14225074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               232, 58
               

               Conread position:
               143-398
               

               Cow position:
               chr25:21951095-21950847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               97, 30
               

               Conread position:
               143-403
               

               Cow position:
               chr25:1838209-1837956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 18
               

               Conread position:
               143-405
               

               Cow position:
               chr25:5791829-5792092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               84, 29
               

               Conread position:
               143-407
               

               Cow position:
               chr25:11661842-11662106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               143-407
               

               Cow position:
               chr25:18564464-18564204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               21, 133
               

               Conread position:
               143-435
               

               Cow position:
               chr25:5756667-5756370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               144-280
               

               Cow position:
               chr25:6121794-6121931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               144-354
               

               Cow position:
               chr25:12081348-12081542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               15, 119
               

               Conread position:
               144-367
               

               Cow position:
               chr25:16001553-16001768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               210, 85
               

               Conread position:
               144-379
               

               Cow position:
               chr25:13099505-13099740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               231, 84
               

               Conread position:
               144-401
               

               Cow position:
               chr25:18206331-18206582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               73, 112
               

               Conread position:
               144-406
               

               Cow position:
               chr25:16064861-16064607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               201
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               232, 118
               

               Conread position:
               144-406
               

               Cow position:
               chr25:27531303-27531558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               233, 60
               

               Conread position:
               144-407
               

               Cow position:
               chr25:21245632-21245897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 138
               

               Conread position:
               148-321
               

               Cow position:
               chr25:20133346-20133516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               141, 15
               

               Conread position:
               148-398
               

               Cow position:
               chr25:33663940-33664175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               228, 54
               

               Conread position:
               148-406
               

               Cow position:
               chr25:5341620-5341361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               70, 59
               

               Conread position:
               148-406
               

               Cow position:
               chr25:22203721-22203977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 34
               

               Conread position:
               149-274
               

               Cow position:
               chr25:31732369-31732492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               149-352
               

               Cow position:
               chr25:29826382-29826178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               149-364
               

               Cow position:
               chr25:11139614-11139402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               149-370
               

               Cow position:
               chr25:20085250-20085037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               149-375
               

               Cow position:
               chr25:7581458-7581682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               149-383
               

               Cow position:
               chr25:18075639-18075405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               149-397
               

               Cow position:
               chr25:15411799-15412054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               228, 0
               

               Conread position:
               149-398
               

               Cow position:
               chr25:20348827-20348579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 24
               

               Conread position:
               149-407
               

               Cow position:
               chr25:41107723-41107467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               227, 115
               

               Conread position:
               149-408
               

               Cow position:
               chr25:30319477-30319741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 142
               

               Conread position:
               149-413
               

               Cow position:
               chr25:31732767-31733033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 81
               

               Conread position:
               150-313
               

               Cow position:
               chr25:3983007-3982851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               150-374
               

               Cow position:
               chr25:2194908-2194693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               150-382
               

               Cow position:
               chr25:26058552-26058322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               226, 43
               

               Conread position:
               150-384
               

               Cow position:
               chr25:18475146-18474910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               96, 13
               

               Conread position:
               150-398
               

               Cow position:
               chr25:5834287-5834532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               81, 43
               

               Conread position:
               150-399
               

               Cow position:
               chr25:380012-380261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               226, 128
               

               Conread position:
               150-407
               

               Cow position:
               chr25:10699124-10698863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               226, 0
               

               Conread position:
               150-407
               

               Cow position:
               chr25:17681809-17682065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               227, 48
               

               Conread position:
               152-313
               

               Cow position:
               chr25:35110162-35110323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               153-266
               

               Cow position:
               chr25:22332727-22332612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               153-274
               

               Cow position:
               chr25:35333121-35333000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               153-293
               

               Cow position:
               chr25:11315868-11315733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               82, 30
               

               Conread position:
               153-293
               

               Cow position:
               chr25:15440814-15440957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               153-305
               

               Cow position:
               chr25:23323167-23323017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               153-315
               

               Cow position:
               chr25:2624769-2624610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               65, 31
               

               Conread position:
               153-316
               

               Cow position:
               chr25:21042344-21042191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               153-354
               

               Cow position:
               chr25:6255974-6256172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               164
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               153-356
               

               Cow position:
               chr25:12840760-12840954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               153-358
               

               Cow position:
               chr25:38425324-38425127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               153-367
               

               Cow position:
               chr25:4002763-4002549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 117
               

               Conread position:
               153-367
               

               Cow position:
               chr25:37448398-37448190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               153-373
               

               Cow position:
               chr25:14467117-14467335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               66, 180
               

               Conread position:
               153-375
               

               Cow position:
               chr25:7306264-7306043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               153-377
               

               Cow position:
               chr25:16400300-16400507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               153-384
               

               Cow position:
               chr25:33691518-33691289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               65, 40
               

               Conread position:
               153-385
               

               Cow position:
               chr25:28187984-28188216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 110
               

               Conread position:
               153-386
               

               Cow position:
               chr25:21894924-21895150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 74
               

               Conread position:
               153-388
               

               Cow position:
               chr25:34669207-34668976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               50, 34
               

               Conread position:
               153-390
               

               Cow position:
               chr25:22297056-22297288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               221, 84
               

               Conread position:
               153-398
               

               Cow position:
               chr25:7216791-7216549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 10
               

               Conread position:
               153-398
               

               Cow position:
               chr25:7641492-7641732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               222, 49
               

               Conread position:
               153-398
               

               Cow position:
               chr25:16921834-16922071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 20
               

               Conread position:
               153-402
               

               Cow position:
               chr25:27504215-27504468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               71, 54
               

               Conread position:
               153-406
               

               Cow position:
               chr25:27821380-27821120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               153-407
               

               Cow position:
               chr25:12204432-12204179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 110
               

               Conread position:
               153-407
               

               Cow position:
               chr25:13569208-13569458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               86, 100
               

               Conread position:
               153-407
               

               Cow position:
               chr25:20496498-20496252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 70
               

               Conread position:
               153-407
               

               Cow position:
               chr25:23410626-23410374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               66, 75
               

               Conread position:
               153-413
               

               Cow position:
               chr25:6424625-6424878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 61
               

               Conread position:
               153-413
               

               Cow position:
               chr25:21191449-21191193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 53
               

               Conread position:
               155-394
               

               Cow position:
               chr25:41363188-41363419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               155-407
               

               Cow position:
               chr25:15391367-15391619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               144, 8
               

               Conread position:
               155-413
               

               Cow position:
               chr25:25948439-25948692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               221, 8
               

               Conread position:
               156-302
               

               Cow position:
               chr25:16555721-16555576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               41, 54
               

               Conread position:
               156-309
               

               Cow position:
               chr25:36017495-36017350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               156-315
               

               Cow position:
               chr25:12755531-12755686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               74, 123
               

               Conread position:
               156-316
               

               Cow position:
               chr25:27801246-27801094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               141, 81
               

               Conread position:
               156-356
               

               Cow position:
               chr25:61618-61421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               77, 38
               

               Conread position:
               156-370
               

               Cow position:
               chr25:20020040-20020237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               156-375
               

               Cow position:
               chr25:13642352-13642571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               74, 124
               

               Conread position:
               156-380
               

               Cow position:
               chr25:35612352-35612562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               181, 37
               

               Conread position:
               156-380
               

               Cow position:
               chr25:36036822-36037041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               220, 29
               

               Conread position:
               156-388
               

               Cow position:
               chr25:14833702-14833922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               220, 18
               

               Conread position:
               156-389
               

               Cow position:
               chr25:9990139-9990361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               218, 53
               

               Conread position:
               156-398
               

               Cow position:
               chr25:11436850-11437081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               156-407
               

               Cow position:
               chr25:1735357-1735597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               156-407
               

               Cow position:
               chr25:9396404-9396164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               83, 24
               

               Conread position:
               156-407
               

               Cow position:
               chr25:26112227-26111991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               240, 107
               

               Conread position:
               156-407
               

               Cow position:
               chr25:33839339-33839097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               194
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               82, 108
               

               Conread position:
               156-407
               

               Cow position:
               chr25:36762064-36761815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 37
               

               Conread position:
               156-413
               

               Cow position:
               chr25:3145804-3145549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               220, 162
               

               Conread position:
               156-413
               

               Cow position:
               chr25:23389320-23389569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               157-308
               

               Cow position:
               chr25:18905844-18905693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               157-373
               

               Cow position:
               chr25:18266118-18265911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               157-382
               

               Cow position:
               chr25:6891568-6891783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               197, 52
               

               Conread position:
               157-384
               

               Cow position:
               chr25:18131030-18130810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               13, 53
               

               Conread position:
               157-389
               

               Cow position:
               chr25:26700989-26700770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               219, 36
               

               Conread position:
               157-398
               

               Cow position:
               chr25:26225067-26225318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               56, 153
               

               Conread position:
               157-408
               

               Cow position:
               chr25:6474138-6474392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 70
               

               Conread position:
               157-413
               

               Cow position:
               chr25:2111026-2110786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               219, 24
               

               Conread position:
               157-413
               

               Cow position:
               chr25:25827427-25827164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 203
               

               Conread position:
               158-357
               

               Cow position:
               chr25:13380654-13380853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               156
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               158-387
               

               Cow position:
               chr25:26757394-26757171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               218, 51
               

               Conread position:
               158-389
               

               Cow position:
               chr25:8226058-8225837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               216, 79
               

               Conread position:
               158-407
               

               Cow position:
               chr25:10138048-10137816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               159-362
               

               Cow position:
               chr25:22369348-22369151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               159-375
               

               Cow position:
               chr25:5846852-5847061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               112, 54
               

               Conread position:
               159-394
               

               Cow position:
               chr25:36081833-36081600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               159-397
               

               Cow position:
               chr25:35607764-35607997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               159-398
               

               Cow position:
               chr25:10407459-10407697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               215, 34
               

               Conread position:
               159-398
               

               Cow position:
               chr25:41392703-41392942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               33, 47
               

               Conread position:
               159-399
               

               Cow position:
               chr25:20023433-20023679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               189, 80
               

               Conread position:
               159-405
               

               Cow position:
               chr25:40957031-40957271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               59, 79
               

               Conread position:
               159-407
               

               Cow position:
               chr25:21192978-21193234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               48, 75
               

               Conread position:
               159-407
               

               Cow position:
               chr25:24726825-24727077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               159-407
               

               Cow position:
               chr25:41330055-41329810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               216, 71
               

               Conread position:
               160-328
               

               Cow position:
               chr25:26269984-26270142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               160-335
               

               Cow position:
               chr25:29312385-29312558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               71, 47
               

               Conread position:
               160-361
               

               Cow position:
               chr25:21289302-21289099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               160-367
               

               Cow position:
               chr25:24405780-24405983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               58, 78
               

               Conread position:
               160-382
               

               Cow position:
               chr25:17566543-17566324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               73, 114
               

               Conread position:
               160-394
               

               Cow position:
               chr25:10746853-10746627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               216, 38
               

               Conread position:
               160-407
               

               Cow position:
               chr25:395308-395066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               209, 54
               

               Conread position:
               160-407
               

               Cow position:
               chr25:33959298-33959551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               60, 167
               

               Conread position:
               160-413
               

               Cow position:
               chr25:12817331-12817076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 61
               

               Conread position:
               161-408
               

               Cow position:
               chr25:20402758-20403011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 196
               

               Conread position:
               162-346
               

               Cow position:
               chr25:25861404-25861586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               162-407
               

               Cow position:
               chr25:12097791-12097552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               214, 20
               

               Conread position:
               162-407
               

               Cow position:
               chr25:12234808-12235047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               213, 31
               

               Conread position:
               162-407
               

               Cow position:
               chr25:15319872-15319628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               214, 24
               

               Conread position:
               162-408
               

               Cow position:
               chr25:9023587-9023353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               215, 32
               

               Conread position:
               163-288
               

               Cow position:
               chr25:11318964-11318838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               163-366
               

               Cow position:
               chr25:24008222-24008423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               71, 118
               

               Conread position:
               163-407
               

               Cow position:
               chr25:26882178-26881925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 186
               

               Conread position:
               164-306
               

               Cow position:
               chr25:5271699-5271556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               68, 135
               

               Conread position:
               164-316
               

               Cow position:
               chr25:17914734-17914584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               69, 125
               

               Conread position:
               164-389
               

               Cow position:
               chr25:17712488-17712266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               64, 107
               

               Conread position:
               164-395
               

               Cow position:
               chr25:12260943-12261170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               70, 45
               

               Conread position:
               164-408
               

               Cow position:
               chr25:12778583-12778822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               196, 40
               

               Conread position:
               166-288
               

               Cow position:
               chr25:14931810-14931935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               166-305
               

               Cow position:
               chr25:37562659-37562522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 48
               

               Conread position:
               166-316
               

               Cow position:
               chr25:30074260-30074408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               166-374
               

               Cow position:
               chr25:8675801-8675593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               166-384
               

               Cow position:
               chr25:21458543-21458323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               188, 0
               

               Conread position:
               166-395
               

               Cow position:
               chr25:23406888-23407117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               166-398
               

               Cow position:
               chr25:26849095-26849327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               123, 27
               

               Conread position:
               166-399
               

               Cow position:
               chr25:3141260-3141026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr25:11097662-11097428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr25:12208445-12208211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr25:13315640-13315874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr25:14352252-14352018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr25:16977754-16977523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               208, 174
               

               Conread position:
               166-399
               

               Cow position:
               chr25:17419137-17418903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr25:19138613-19138847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr25:34618150-34618384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-401
               

               Cow position:
               chr25:36554954-36554723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               211, 93
               

               Conread position:
               166-406
               

               Cow position:
               chr25:22412528-22412769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               188, 105
               

               Conread position:
               166-407
               

               Cow position:
               chr25:2510754-2510999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:3689369-3689124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:5536694-5536939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:6740765-6740529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               208, 106
               

               Conread position:
               166-407
               

               Cow position:
               chr25:7446099-7445862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               210, 64
               

               Conread position:
               166-407
               

               Cow position:
               chr25:7609272-7609027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:8235286-8235531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:9415082-9414837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 40
               

               Conread position:
               166-407
               

               Cow position:
               chr25:10895773-10896018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:11269249-11269489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               210, 97
               

               Conread position:
               166-407
               

               Cow position:
               chr25:12157837-12157592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               171, 180
               

               Conread position:
               166-407
               

               Cow position:
               chr25:12176236-12176489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:13062811-13062566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:13445966-13446211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:13787904-13787660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               181, 176
               

               Conread position:
               166-407
               

               Cow position:
               chr25:13955430-13955675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:13961016-13960776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               221, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:13966710-13966955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:14954072-14954316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               210, 154
               

               Conread position:
               166-407
               

               Cow position:
               chr25:15412980-15412735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:15618655-15618410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:16068213-16067971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               208, 27
               

               Conread position:
               166-407
               

               Cow position:
               chr25:16242021-16242260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               210, 108
               

               Conread position:
               166-407
               

               Cow position:
               chr25:16737989-16738232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               140, 240
               

               Conread position:
               166-407
               

               Cow position:
               chr25:17037410-17037165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:17538459-17538704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               44, 40
               

               Conread position:
               166-407
               

               Cow position:
               chr25:17598540-17598785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:17807823-17808068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:18090877-18090631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:18236419-18236664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:19531339-19531094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:19586380-19586625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:22198541-22198296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:23600984-23601229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:24654208-24654460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               76, 133
               

               Conread position:
               166-407
               

               Cow position:
               chr25:25510846-25510604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:25873033-25873278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:26319700-26319455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 52
               

               Conread position:
               166-407
               

               Cow position:
               chr25:26408150-26407909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               167, 112
               

               Conread position:
               166-407
               

               Cow position:
               chr25:27077017-27076772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               97, 101
               

               Conread position:
               166-407
               

               Cow position:
               chr25:27142977-27143222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               171, 179
               

               Conread position:
               166-407
               

               Cow position:
               chr25:28273269-28273024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:29351970-29352215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               171, 179
               

               Conread position:
               166-407
               

               Cow position:
               chr25:29524908-29525153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:29561911-29561673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               208, 18
               

               Conread position:
               166-407
               

               Cow position:
               chr25:33989710-33989955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:34257942-34257697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:34659151-34659395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               210, 154
               

               Conread position:
               166-407
               

               Cow position:
               chr25:35554637-35554392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:35602386-35602141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:36126945-36127190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               209, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:36392010-36392255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr25:39385881-39386122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               210, 7
               

               Conread position:
               166-408
               

               Cow position:
               chr25:34121134-34121380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               97, 101
               

               Conread position:
               166-410
               

               Cow position:
               chr25:9932028-9931784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               211, 238
               

               Conread position:
               167-398
               

               Cow position:
               chr25:4898047-4897818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               186, 112
               

               Conread position:
               167-398
               

               Cow position:
               chr25:26923802-26923570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               209, 0
               

               Conread position:
               167-407
               

               Cow position:
               chr25:9744179-9743934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               167-408
               

               Cow position:
               chr25:27622037-27621790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               64, 166
               

               Conread position:
               168-343
               

               Cow position:
               chr25:2596133-2595954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               76, 69
               

               Conread position:
               168-407
               

               Cow position:
               chr25:12752965-12753208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               169-406
               

               Cow position:
               chr25:35446884-35446656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               227, 108
               

               Conread position:
               169-408
               

               Cow position:
               chr25:18294368-18294606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               65, 112
               

               Conread position:
               170-375
               

               Cow position:
               chr25:13122123-13121918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               170-406
               

               Cow position:
               chr25:16867174-16866942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 27
               

               Conread position:
               170-407
               

               Cow position:
               chr25:18241109-18240862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               170-407
               

               Cow position:
               chr25:21121535-21121294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               67, 55
               

               Conread position:
               173-366
               

               Cow position:
               chr25:19576502-19576686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               181, 18
               

               Conread position:
               173-376
               

               Cow position:
               chr25:31230293-31230479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               173-407
               

               Cow position:
               chr25:8576634-8576400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               193, 44
               

               Conread position:
               173-413
               

               Cow position:
               chr25:20060084-20060325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 107
               

               Conread position:
               174-389
               

               Cow position:
               chr25:6003050-6003261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               202, 39
               

               Conread position:
               175-389
               

               Cow position:
               chr25:17702030-17702233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               42, 53
               

               Conread position:
               175-395
               

               Cow position:
               chr25:7386690-7386469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               175-398
               

               Cow position:
               chr25:12195387-12195604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               41, 32
               

               Conread position:
               175-398
               

               Cow position:
               chr25:26238811-26238591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               201, 62
               

               Conread position:
               175-400
               

               Cow position:
               chr25:3927987-3927762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               199, 219
               

               Conread position:
               175-404
               

               Cow position:
               chr25:18448778-18448553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               201, 10
               

               Conread position:
               175-407
               

               Cow position:
               chr25:12943080-12943316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               175-407
               

               Cow position:
               chr25:16038896-16039130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               201, 130
               

               Conread position:
               175-407
               

               Cow position:
               chr25:20771388-20771624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               177-389
               

               Cow position:
               chr25:21266947-21266736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               141, 9
               

               Conread position:
               177-398
               

               Cow position:
               chr25:12360149-12359927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               177-407
               

               Cow position:
               chr25:12171399-12171174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               169, 105
               

               Conread position:
               177-407
               

               Cow position:
               chr25:16231184-16231415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               177-407
               

               Cow position:
               chr25:20461065-20460840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               178, 60
               

               Conread position:
               177-407
               

               Cow position:
               chr25:34342955-34343189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               177-413
               

               Cow position:
               chr25:18885544-18885777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               199, 74
               

               Conread position:
               179-410
               

               Cow position:
               chr25:25783577-25783346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               16, 7
               

               Conread position:
               181-372
               

               Cow position:
               chr25:33260672-33260488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               183-407
               

               Cow position:
               chr25:14274376-14274150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               194, 11
               

               Conread position:
               183-407
               

               Cow position:
               chr25:15273618-15273399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               193, 11
               

               Conread position:
               185-389
               

               Cow position:
               chr25:21096590-21096791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               190, 58
               

               Conread position:
               185-398
               

               Cow position:
               chr25:2499194-2498983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               131, 52
               

               Conread position:
               185-398
               

               Cow position:
               chr25:8482377-8482592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               185-407
               

               Cow position:
               chr25:12359481-12359259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               128, 97
               

               Conread position:
               186-375
               

               Cow position:
               chr25:15254404-15254586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               186-389
               

               Cow position:
               chr25:6238061-6237853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               111, 58
               

               Conread position:
               186-393
               

               Cow position:
               chr25:5571866-5572072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               190, 73
               

               Conread position:
               186-394
               

               Cow position:
               chr25:9642285-9642080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               193, 43
               

               Conread position:
               186-398
               

               Cow position:
               chr25:13840183-13840397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               70, 170
               

               Conread position:
               186-398
               

               Cow position:
               chr25:40388527-40388735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               186-407
               

               Cow position:
               chr25:6226973-6226750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               44, 21
               

               Conread position:
               186-407
               

               Cow position:
               chr25:16560662-16560881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               190, 93
               

               Conread position:
               186-407
               

               Cow position:
               chr25:17975438-17975658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               191, 51
               

               Conread position:
               186-407
               

               Cow position:
               chr25:18969205-18968981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               190, 28
               

               Conread position:
               186-407
               

               Cow position:
               chr25:24136506-24136727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               24, 42
               

               Conread position:
               186-408
               

               Cow position:
               chr25:6948124-6948346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               191, 175
               

               Conread position:
               186-420
               

               Cow position:
               chr25:18491004-18490767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               73, 61
               

               Conread position:
               187-366
               

               Cow position:
               chr25:18293674-18293511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               188-324
               

               Cow position:
               chr25:17704681-17704545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               188-416
               

               Cow position:
               chr25:30816761-30816524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               190-398
               

               Cow position:
               chr25:34672663-34672872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               193-348
               

               Cow position:
               chr25:34169876-34169726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               193-376
               

               Cow position:
               chr25:11666577-11666400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               41, 88
               

               Conread position:
               193-406
               

               Cow position:
               chr25:12117066-12117265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               194-355
               

               Cow position:
               chr25:16316815-16316662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               194-398
               

               Cow position:
               chr25:5271514-5271308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               194-403
               

               Cow position:
               chr25:15433728-15433521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               183, 80
               

               Conread position:
               194-407
               

               Cow position:
               chr25:17659488-17659266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               194-407
               

               Cow position:
               chr25:33256290-33256082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 96
               

               Conread position:
               195-407
               

               Cow position:
               chr25:12750234-12750454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               196-406
               

               Cow position:
               chr25:15006119-15005916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               11, 85
               

               Conread position:
               196-407
               

               Cow position:
               chr25:23945591-23945805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 84
               

               Conread position:
               197-380
               

               Cow position:
               chr25:40407552-40407730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               41, 101
               

               Conread position:
               198-398
               

               Cow position:
               chr25:36120118-36119922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               176, 38
               

               Conread position:
               200-407
               

               Cow position:
               chr25:21209029-21209237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 37
               

               Conread position:
               201-407
               

               Cow position:
               chr25:6894403-6894202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               20, 15
               

               Conread position:
               202-358
               

               Cow position:
               chr25:19478604-19478449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               141, 22
               

               Conread position:
               206-406
               

               Cow position:
               chr25:8133447-8133249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               169, 88
               

               Conread position:
               206-407
               

               Cow position:
               chr25:8230972-8231173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               170, 67
               

               Conread position:
               206-413
               

               Cow position:
               chr25:6606449-6606655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               151, 44
               

               Conread position:
               207-392
               

               Cow position:
               chr25:14266595-14266775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               61, 30
               

               Conread position:
               207-413
               

               Cow position:
               chr25:6774888-6775097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               169, 71
               

               Conread position:
               209-386
               

               Cow position:
               chr25:14191383-14191563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               210-407
               

               Cow position:
               chr25:9842909-9842714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               150, 27
               

               Conread position:
               214-411
               

               Cow position:
               chr25:10657119-10657312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               215-403
               

               Cow position:
               chr25:11956730-11956542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               161, 137
               

               Conread position:
               216-388
               

               Cow position:
               chr25:18934973-18935144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               216-398
               

               Cow position:
               chr25:10010819-10010998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               216-407
               

               Cow position:
               chr25:3992693-3992499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               160, 12
               

               Conread position:
               216-407
               

               Cow position:
               chr25:11830001-11830187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               160, 21
               

               Conread position:
               216-408
               

               Cow position:
               chr25:15368579-15368384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               155, 21
               

               Conread position:
               216-414
               

               Cow position:
               chr25:10330500-10330690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               160, 9
               

               Conread position:
               218-375
               

               Cow position:
               chr25:13566747-13566590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               17, 138
               

               Conread position:
               221-373
               

               Cow position:
               chr25:36557584-36557438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               221-413
               

               Cow position:
               chr25:13325491-13325305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               133, 39
               

               Conread position:
               222-407
               

               Cow position:
               chr25:36633087-36633275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               17, 179
               

               Conread position:
               223-407
               

               Cow position:
               chr25:31586934-31586749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               149, 37
               

               Conread position:
               228-382
               

               Cow position:
               chr25:38957863-38957715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               47, 83
               

               Conread position:
               229-398
               

               Cow position:
               chr25:36871748-36871580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               147, 22
               

               Conread position:
               230-407
               

               Cow position:
               chr25:35618024-35617846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               147, 123
               

               Conread position:
               230-414
               

               Cow position:
               chr25:13720653-13720838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               146, 30
               

               Conread position:
               231-388
               

               Cow position:
               chr25:22909959-22910113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               145, 68
               

               Conread position:
               231-398
               

               Cow position:
               chr25:41044702-41044537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               146, 40
               

               Conread position:
               231-407
               

               Cow position:
               chr25:9625698-9625516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               231-413
               

               Cow position:
               chr25:25961850-25961665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               145, 34
               

               Conread position:
               232-371
               

               Cow position:
               chr25:32176332-32176472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               232-406
               

               Cow position:
               chr25:11056760-11056589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               57, 27
               

               Conread position:
               232-407
               

               Cow position:
               chr25:4049915-4049743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               145, 69
               

               Conread position:
               232-407
               

               Cow position:
               chr25:17994405-17994583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               144, 68
               

               Conread position:
               232-407
               

               Cow position:
               chr25:21961122-21961297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               142, 76
               

               Conread position:
               233-348
               

               Cow position:
               chr25:35902125-35902011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               233-388
               

               Cow position:
               chr25:10156472-10156322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               146, 46
               

               Conread position:
               233-399
               

               Cow position:
               chr25:19366535-19366689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               143, 73
               

               Conread position:
               233-407
               

               Cow position:
               chr25:15714768-15714590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr25:23829236-23829405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               155, 62
               

               Conread position:
               234-386
               

               Cow position:
               chr25:7440733-7440588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               141, 21
               

               Conread position:
               234-404
               

               Cow position:
               chr25:32898918-32899089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               141, 120
               

               Conread position:
               235-397
               

               Cow position:
               chr25:33457589-33457429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               139, 7
               

               Conread position:
               235-405
               

               Cow position:
               chr25:4488610-4488447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               119, 44
               

               Conread position:
               236-407
               

               Cow position:
               chr25:20434433-20434264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               140, 23
               

               Conread position:
               236-407
               

               Cow position:
               chr25:32513958-32514133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr25:38569718-38569885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               140, 27
               

               Conread position:
               237-364
               

               Cow position:
               chr25:17475638-17475768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               238-407
               

               Cow position:
               chr25:11051256-11051092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               138, 70
               

               Conread position:
               239-360
               

               Cow position:
               chr25:33572325-33572446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               241-380
               

               Cow position:
               chr25:16691395-16691255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               241-407
               

               Cow position:
               chr25:17119314-17119476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               135, 41
               

               Conread position:
               243-413
               

               Cow position:
               chr25:33687020-33687195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               133, 13
               

               Conread position:
               245-388
               

               Cow position:
               chr25:11823653-11823794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               15, 11
               

               Conread position:
               248-373
               

               Cow position:
               chr25:12997223-12997096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               248-375
               

               Cow position:
               chr25:12174633-12174760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               248-413
               

               Cow position:
               chr25:22730503-22730352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               252-380
               

               Cow position:
               chr25:14809179-14809049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               92, 54
               

               Conread position:
               258-407
               

               Cow position:
               chr25:3969256-3969105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               117, 8
               

               Conread position:
               258-408
               

               Cow position:
               chr25:8485674-8485824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               118, 19
               

               Conread position:
               260-388
               

               Cow position:
               chr25:8961319-8961194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               116, 19
               

               Conread position:
               260-413
               

               Cow position:
               chr25:29336351-29336193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               117, 99
               

               Conread position:
               262-398
               

               Cow position:
               chr25:7687714-7687851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               265-399
               

               Cow position:
               chr25:23919997-23920133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               265-402
               

               Cow position:
               chr25:22346498-22346360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               269-407
               

               Cow position:
               chr25:4860594-4860736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               285-398
               

               Cow position:
               chr25:22549778-22549893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               292-407
               

               Cow position:
               chr25:9349429-9349548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               292-407
               

               Cow position:
               chr25:9634747-9634632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               85, 52
               

               Conread position:
               303-407
               

               Cow position:
               chr25:32278212-32278320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               73, 0
               
Show alignments to all cow chromosomes.
Conread position:	103-408
Cow position:	chr25:448332-448637 (view UCSC Genome Browser custom track)
Alignm length:	310
Alignm identity:	168
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	274, 173
Conread position:	136-313
Cow position:	chr25:32453421-32453591 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	126
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	13, 0
Conread position:	137-373
Cow position:	chr25:6815222-6814998 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	165
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	23, 41
Conread position:	138-374
Cow position:	chr25:36026986-36026753 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	182
Alignm E-value:	0
Alignm gaps (pig, cow):	137, 0
Conread position:	138-386
Cow position:	chr25:35625206-35625438 (view UCSC Genome Browser custom track)
Alignm length:	250
Alignm identity:	188
Alignm E-value:	1e-38
Alignm gaps (pig, cow):	238, 47
Conread position:	138-407
Cow position:	chr25:20651249-20650975 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	180
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	216, 0
Conread position:	139-277
Cow position:	chr25:8485516-8485656 (view UCSC Genome Browser custom track)
Alignm length:	141
Alignm identity:	110
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	91, 0
Conread position:	139-288
Cow position:	chr25:31704978-31704821 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	117
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	10, 0
Conread position:	139-305
Cow position:	chr25:18894744-18894908 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	124
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	13, 0
Conread position:	139-312
Cow position:	chr25:17342432-17342257 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	134
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	94, 0
Conread position:	139-313
Cow position:	chr25:13672370-13672195 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	135
Alignm E-value:	8e-35
Alignm gaps (pig, cow):	91, 0
Conread position:	139-318
Cow position:	chr25:7750427-7750252 (view UCSC Genome Browser custom track)
Alignm length:	183
Alignm identity:	132
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	13, 65
Conread position:	139-325
Cow position:	chr25:8157528-8157715 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	141
Alignm E-value:	9e-26
Alignm gaps (pig, cow):	13, 104
Conread position:	139-326
Cow position:	chr25:13272545-13272363 (view UCSC Genome Browser custom track)
Alignm length:	190
Alignm identity:	140
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	20, 74
Conread position:	139-329
Cow position:	chr25:13736338-13736520 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	145
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	17, 0
Conread position:	139-330
Cow position:	chr25:26089837-26090025 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	152
Alignm E-value:	7e-34
Alignm gaps (pig, cow):	8, 57
Conread position:	139-335
Cow position:	chr25:12899733-12899540 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	149
Alignm E-value:	3e-36
Alignm gaps (pig, cow):	98, 0
Conread position:	139-347
Cow position:	chr25:10218070-10218278 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	160
Alignm E-value:	3e-36
Alignm gaps (pig, cow):	15, 151
Conread position:	139-358
Cow position:	chr25:15286565-15286778 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	164
Alignm E-value:	6e-32
Alignm gaps (pig, cow):	10, 26
Conread position:	139-359
Cow position:	chr25:7329524-7329305 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	173
Alignm E-value:	0
Alignm gaps (pig, cow):	8, 56