• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-rnbm29b_l4.5
        

               
Conread position:
               
126-338
               

               
Cow position:
               
chr27:18434506-18434298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
137-367
               

               
Cow position:
               
chr27:27245377-27245151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
81, 70
               

               
Conread position:
               
138-351
               

               
Cow position:
               
chr27:13251985-13252195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
138-388
               

               
Cow position:
               
chr27:8048763-8048516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
138-396
               

               
Cow position:
               
chr27:30890266-30890517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
238, 16
               

               
Conread position:
               
138-398
               

               
Cow position:
               
chr27:23632572-23632831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
138-406
               

               
Cow position:
               
chr27:6550435-6550695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 10
               

               
Conread position:
               
138-407
               

               
Cow position:
               
chr27:815340-815610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
17, 102
               

               
Conread position:
               
139-306
               

               
Cow position:
               
chr27:715482-715647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
139-306
               

               
Cow position:
               
chr27:20789400-20789239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
139-308
               

               
Cow position:
               
chr27:29816642-29816479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
139-315
               

               
Cow position:
               
chr27:27460594-27460422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
139-326
               

               
Cow position:
               
chr27:27270560-27270377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
97, 44
               

               
Conread position:
               
139-334
               

               
Cow position:
               
chr27:22268480-22268673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
139-340
               

               
Cow position:
               
chr27:9169668-9169470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
16, 138
               

               
Conread position:
               
139-351
               

               
Cow position:
               
chr27:8353455-8353662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
139-355
               

               
Cow position:
               
chr27:30670719-30670927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
139-356
               

               
Cow position:
               
chr27:20037137-20036938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
8, 45
               

               
Conread position:
               
139-356
               

               
Cow position:
               
chr27:20591958-20592174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 143
               

               
Conread position:
               
139-356
               

               
Cow position:
               
chr27:30988776-30988989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
206, 9
               

               
Conread position:
               
139-363
               

               
Cow position:
               
chr27:30844099-30843881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
139-364
               

               
Cow position:
               
chr27:28001833-28001620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
5, 117
               

               
Conread position:
               
139-367
               

               
Cow position:
               
chr27:27003296-27003080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
139-367
               

               
Cow position:
               
chr27:27055553-27055779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
139-373
               

               
Cow position:
               
chr27:18593248-18593475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
139-373
               

               
Cow position:
               
chr27:25277119-25277342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
139-373
               

               
Cow position:
               
chr27:30814396-30814609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
139-375
               

               
Cow position:
               
chr27:15668792-15668558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
139-375
               

               
Cow position:
               
chr27:16871937-16871710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
8, 100
               

               
Conread position:
               
139-375
               

               
Cow position:
               
chr27:17926643-17926428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
139-375
               

               
Cow position:
               
chr27:19660911-19661152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
6, 171
               

               
Conread position:
               
139-375
               

               
Cow position:
               
chr27:20641355-20641137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
139-375
               

               
Cow position:
               
chr27:28164424-28164202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
139-381
               

               
Cow position:
               
chr27:30550977-30551212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
139-383
               

               
Cow position:
               
chr27:25998681-25998923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
139-385
               

               
Cow position:
               
chr27:20369010-20369259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
139-385
               

               
Cow position:
               
chr27:29515873-29515642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
237, 10
               

               
Conread position:
               
139-386
               

               
Cow position:
               
chr27:2592527-2592762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 9
               

               
Conread position:
               
139-387
               

               
Cow position:
               
chr27:1183899-1183654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
139-388
               

               
Cow position:
               
chr27:30765016-30765255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
139-390
               

               
Cow position:
               
chr27:24321165-24321413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
237, 9
               

               
Conread position:
               
139-391
               

               
Cow position:
               
chr27:1353566-1353809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
139-392
               

               
Cow position:
               
chr27:20795769-20796011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
139-398
               

               
Cow position:
               
chr27:4664457-4664705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
139-398
               

               
Cow position:
               
chr27:6541607-6541858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
237, 98
               

               
Conread position:
               
139-398
               

               
Cow position:
               
chr27:10979842-10980097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
139-398
               

               
Cow position:
               
chr27:19387996-19388250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
161, 9
               

               
Conread position:
               
139-398
               

               
Cow position:
               
chr27:26999443-26999191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
139-398
               

               
Cow position:
               
chr27:29831720-29831455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 137
               

               
Conread position:
               
139-398
               

               
Cow position:
               
chr27:30868761-30868507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 10
               

               
Conread position:
               
139-399
               

               
Cow position:
               
chr27:24331699-24331960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 130
               

               
Conread position:
               
139-399
               

               
Cow position:
               
chr27:26398279-26398025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 17
               

               
Conread position:
               
139-403
               

               
Cow position:
               
chr27:24014760-24014503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
139-403
               

               
Cow position:
               
chr27:30792960-30792699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
237, 68
               

               
Conread position:
               
139-406
               

               
Cow position:
               
chr27:2298385-2298656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
234, 0
               

               
Conread position:
               
139-406
               

               
Cow position:
               
chr27:26433828-26433571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
238, 14
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr27:1768643-1768393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr27:19486786-19487058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
235, 0
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr27:22418791-22418526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr27:23483206-23483470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
238, 22
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr27:25411543-25411270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr27:30582713-30582982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 120
               

               
Conread position:
               
139-408
               

               
Cow position:
               
chr27:24477395-24477646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
237, 10
               

               
Conread position:
               
139-408
               

               
Cow position:
               
chr27:24999761-24999490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 10
               

               
Conread position:
               
139-408
               

               
Cow position:
               
chr27:28276261-28276516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
237, 14
               

               
Conread position:
               
139-408
               

               
Cow position:
               
chr27:28931815-28931544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 10
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr27:1123010-1123269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
237, 22
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr27:11435343-11435080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
237, 24
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr27:21351043-21350764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr27:25923770-25924034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
237, 59
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr27:26413275-26413007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 98
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr27:27136541-27136283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
261, 100
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr27:27141581-27141843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
237, 17
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr27:28190236-28189966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 57
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr27:31373000-31372729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
110, 88
               

               
Conread position:
               
140-367
               

               
Cow position:
               
chr27:26885273-26885050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
196, 29
               

               
Conread position:
               
140-372
               

               
Cow position:
               
chr27:19647961-19647738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
140-373
               

               
Cow position:
               
chr27:1498295-1498521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
140-385
               

               
Cow position:
               
chr27:8292025-8291790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
131, 8
               

               
Conread position:
               
140-386
               

               
Cow position:
               
chr27:8571062-8570821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
140-398
               

               
Cow position:
               
chr27:17472788-17473046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 139
               

               
Conread position:
               
140-399
               

               
Cow position:
               
chr27:1290871-1290634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 33
               

               
Conread position:
               
140-405
               

               
Cow position:
               
chr27:4672998-4673262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 88
               

               
Conread position:
               
140-406
               

               
Cow position:
               
chr27:299401-299139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
236, 21
               

               
Conread position:
               
140-407
               

               
Cow position:
               
chr27:2957384-2957649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 37
               

               
Conread position:
               
140-407
               

               
Cow position:
               
chr27:8942704-8942441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
131, 98
               

               
Conread position:
               
140-407
               

               
Cow position:
               
chr27:12549085-12549354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
229, 25
               

               
Conread position:
               
140-407
               

               
Cow position:
               
chr27:19299369-19299640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
140-407
               

               
Cow position:
               
chr27:23472235-23472501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
218, 56
               

               
Conread position:
               
140-413
               

               
Cow position:
               
chr27:7212733-7212471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
8, 68
               

               
Conread position:
               
140-413
               

               
Cow position:
               
chr27:15867376-15867638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
98, 33
               

               
Conread position:
               
140-414
               

               
Cow position:
               
chr27:15866193-15866474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
21, 147
               

               
Conread position:
               
140-414
               

               
Cow position:
               
chr27:18543972-18544250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 128
               

               
Conread position:
               
141-322
               

               
Cow position:
               
chr27:3306750-3306933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 98
               

               
Conread position:
               
141-360
               

               
Cow position:
               
chr27:11296252-11296452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
141-367
               

               
Cow position:
               
chr27:19685730-19685513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
141-382
               

               
Cow position:
               
chr27:18558339-18558581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
95, 108
               

               
Conread position:
               
141-382
               

               
Cow position:
               
chr27:27641020-27640775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
141-384
               

               
Cow position:
               
chr27:20765978-20765744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
141-388
               

               
Cow position:
               
chr27:12596745-12596980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
233, 87
               

               
Conread position:
               
141-398
               

               
Cow position:
               
chr27:15859107-15858858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
235, 52
               

               
Conread position:
               
141-413
               

               
Cow position:
               
chr27:28921917-28921648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 88
               

               
Conread position:
               
142-335
               

               
Cow position:
               
chr27:13841355-13841546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
142-335
               

               
Cow position:
               
chr27:24357239-24357435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
142-345
               

               
Cow position:
               
chr27:3879-4067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
142-364
               

               
Cow position:
               
chr27:30914988-30915200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
142-374
               

               
Cow position:
               
chr27:25471121-25471349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
142-378
               

               
Cow position:
               
chr27:20283623-20283843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
142-388
               

               
Cow position:
               
chr27:10307322-10307072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
142-392
               

               
Cow position:
               
chr27:23554351-23554096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 231
               

               
Conread position:
               
142-398
               

               
Cow position:
               
chr27:22220537-22220787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 89
               

               
Conread position:
               
142-398
               

               
Cow position:
               
chr27:26424604-26424356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
173, 21
               

               
Conread position:
               
142-398
               

               
Cow position:
               
chr27:30676889-30677132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 97
               

               
Conread position:
               
142-406
               

               
Cow position:
               
chr27:28038360-28038098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
142-407
               

               
Cow position:
               
chr27:9090821-9090556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 11
               

               
Conread position:
               
142-407
               

               
Cow position:
               
chr27:21138802-21139072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
12, 90
               

               
Conread position:
               
142-407
               

               
Cow position:
               
chr27:23128437-23128699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
91, 127
               

               
Conread position:
               
142-408
               

               
Cow position:
               
chr27:24227813-24227547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
142-413
               

               
Cow position:
               
chr27:11536122-11535847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
142-413
               

               
Cow position:
               
chr27:22399575-22399844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
234, 28
               

               
Conread position:
               
142-414
               

               
Cow position:
               
chr27:30560895-30561168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 76
               

               
Conread position:
               
142-420
               

               
Cow position:
               
chr27:27040585-27040859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 139
               

               
Conread position:
               
143-288
               

               
Cow position:
               
chr27:10395277-10395135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 96
               

               
Conread position:
               
143-327
               

               
Cow position:
               
chr27:19896737-19896918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
143-328
               

               
Cow position:
               
chr27:30872077-30871897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
143-371
               

               
Cow position:
               
chr27:27053275-27053502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
8, 74
               

               
Conread position:
               
143-380
               

               
Cow position:
               
chr27:12246642-12246874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
200, 30
               

               
Conread position:
               
143-385
               

               
Cow position:
               
chr27:12429385-12429628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
143-388
               

               
Cow position:
               
chr27:19577656-19577897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
66, 87
               

               
Conread position:
               
143-399
               

               
Cow position:
               
chr27:28982928-28982671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
73, 83
               

               
Conread position:
               
143-406
               

               
Cow position:
               
chr27:26299817-26300079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
143-407
               

               
Cow position:
               
chr27:11255502-11255754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
233, 50
               

               
Conread position:
               
143-407
               

               
Cow position:
               
chr27:27038855-27038597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 18
               

               
Conread position:
               
143-413
               

               
Cow position:
               
chr27:12516175-12516448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
144-315
               

               
Cow position:
               
chr27:26489922-26489752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
144-316
               

               
Cow position:
               
chr27:23890920-23891088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
144-348
               

               
Cow position:
               
chr27:6787938-6788141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
144-365
               

               
Cow position:
               
chr27:18031083-18030860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
20, 198
               

               
Conread position:
               
144-372
               

               
Cow position:
               
chr27:18215035-18215262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 52
               

               
Conread position:
               
144-372
               

               
Cow position:
               
chr27:30605666-30605889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
144-398
               

               
Cow position:
               
chr27:6500044-6500298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
144-398
               

               
Cow position:
               
chr27:15319434-15319685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
155, 52
               

               
Conread position:
               
144-398
               

               
Cow position:
               
chr27:27623034-27622780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
232, 22
               

               
Conread position:
               
144-404
               

               
Cow position:
               
chr27:31147687-31147431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 58
               

               
Conread position:
               
144-407
               

               
Cow position:
               
chr27:14670404-14670137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
144-407
               

               
Cow position:
               
chr27:20828726-20828462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
144-407
               

               
Cow position:
               
chr27:31231102-31230850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
230, 10
               

               
Conread position:
               
145-375
               

               
Cow position:
               
chr27:22454794-22454570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
113, 84
               

               
Conread position:
               
145-384
               

               
Cow position:
               
chr27:30354359-30354126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
229, 84
               

               
Conread position:
               
145-408
               

               
Cow position:
               
chr27:16786811-16787078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
232, 16
               

               
Conread position:
               
148-385
               

               
Cow position:
               
chr27:26218693-26218915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
148-397
               

               
Cow position:
               
chr27:26141758-26142026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
148-407
               

               
Cow position:
               
chr27:27020117-27019858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 131
               

               
Conread position:
               
149-280
               

               
Cow position:
               
chr27:30672576-30672445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
149-354
               

               
Cow position:
               
chr27:31499051-31499256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 136
               

               
Conread position:
               
149-358
               

               
Cow position:
               
chr27:16705240-16705439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
149-363
               

               
Cow position:
               
chr27:6037111-6037319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
58, 62
               

               
Conread position:
               
149-386
               

               
Cow position:
               
chr27:4812892-4812656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
228, 88
               

               
Conread position:
               
149-388
               

               
Cow position:
               
chr27:6523025-6523269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 120
               

               
Conread position:
               
149-396
               

               
Cow position:
               
chr27:27389029-27388797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
227, 7
               

               
Conread position:
               
149-398
               

               
Cow position:
               
chr27:26224286-26224036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 195
               

               
Conread position:
               
149-398
               

               
Cow position:
               
chr27:26441073-26440825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
69, 89
               

               
Conread position:
               
149-407
               

               
Cow position:
               
chr27:11081182-11081441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
85, 132
               

               
Conread position:
               
149-456
               

               
Cow position:
               
chr27:22035387-22035081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 44
               

               
Conread position:
               
150-319
               

               
Cow position:
               
chr27:14343477-14343314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
150-375
               

               
Cow position:
               
chr27:17397462-17397240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
200, 0
               

               
Conread position:
               
150-384
               

               
Cow position:
               
chr27:27259600-27259827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
226, 16
               

               
Conread position:
               
150-388
               

               
Cow position:
               
chr27:25676215-25676456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
150-388
               

               
Cow position:
               
chr27:27632617-27632386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
229, 54
               

               
Conread position:
               
150-413
               

               
Cow position:
               
chr27:536454-536704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
226, 44
               

               
Conread position:
               
153-268
               

               
Cow position:
               
chr27:20570111-20570228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
153-271
               

               
Cow position:
               
chr27:29380848-29380967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
77, 104
               

               
Conread position:
               
153-277
               

               
Cow position:
               
chr27:29236573-29236691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
153-279
               

               
Cow position:
               
chr27:26226298-26226173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 61
               

               
Conread position:
               
153-312
               

               
Cow position:
               
chr27:4011669-4011820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
153-348
               

               
Cow position:
               
chr27:27550750-27550565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
153-370
               

               
Cow position:
               
chr27:29250870-29251084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
153-375
               

               
Cow position:
               
chr27:22498549-22498762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
182, 84
               

               
Conread position:
               
153-384
               

               
Cow position:
               
chr27:29399807-29400036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
154, 111
               

               
Conread position:
               
153-386
               

               
Cow position:
               
chr27:6620137-6620367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
153-389
               

               
Cow position:
               
chr27:20543938-20544176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
153-394
               

               
Cow position:
               
chr27:1189823-1189584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
223, 106
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr27:14902661-14902416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 101
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr27:23929968-23930197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
223, 74
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr27:26509168-26508928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 15
               

               
Conread position:
               
153-401
               

               
Cow position:
               
chr27:23882385-23882139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 15
               

               
Conread position:
               
153-403
               

               
Cow position:
               
chr27:29977244-29977496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 48
               

               
Conread position:
               
153-406
               

               
Cow position:
               
chr27:15925333-15925578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 110
               

               
Conread position:
               
153-407
               

               
Cow position:
               
chr27:6454203-6454458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
221, 72
               

               
Conread position:
               
153-407
               

               
Cow position:
               
chr27:13005832-13006076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
224, 61
               

               
Conread position:
               
153-407
               

               
Cow position:
               
chr27:19589467-19589720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
153-407
               

               
Cow position:
               
chr27:27737934-27737688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
65, 87
               

               
Conread position:
               
153-407
               

               
Cow position:
               
chr27:27844003-27843747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 71
               

               
Conread position:
               
153-407
               

               
Cow position:
               
chr27:28518287-28518530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 49
               

               
Conread position:
               
153-408
               

               
Cow position:
               
chr27:26492709-26492454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
223, 51
               

               
Conread position:
               
153-413
               

               
Cow position:
               
chr27:7958849-7958584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 133
               

               
Conread position:
               
153-413
               

               
Cow position:
               
chr27:8962264-8962018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
221, 64
               

               
Conread position:
               
153-413
               

               
Cow position:
               
chr27:11273569-11273818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
201, 23
               

               
Conread position:
               
153-413
               

               
Cow position:
               
chr27:24446163-24445905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 40
               

               
Conread position:
               
153-413
               

               
Cow position:
               
chr27:26833187-26833424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
223, 20
               

               
Conread position:
               
153-413
               

               
Cow position:
               
chr27:27684128-27683863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
221, 77
               

               
Conread position:
               
153-421
               

               
Cow position:
               
chr27:30177584-30177315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 87
               

               
Conread position:
               
156-327
               

               
Cow position:
               
chr27:19668800-19668627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
156-333
               

               
Cow position:
               
chr27:15643166-15643343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
156-359
               

               
Cow position:
               
chr27:22547413-22547211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
156-364
               

               
Cow position:
               
chr27:22330676-22330472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 85
               

               
Conread position:
               
156-367
               

               
Cow position:
               
chr27:20552775-20552568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
156-371
               

               
Cow position:
               
chr27:20354579-20354785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
156-375
               

               
Cow position:
               
chr27:706946-707156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
156-375
               

               
Cow position:
               
chr27:30359403-30359604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
156-378
               

               
Cow position:
               
chr27:21569848-21569631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
76, 96
               

               
Conread position:
               
156-388
               

               
Cow position:
               
chr27:1058684-1058457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 29
               

               
Conread position:
               
156-388
               

               
Cow position:
               
chr27:8430443-8430218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
143, 57
               

               
Conread position:
               
156-388
               

               
Cow position:
               
chr27:29019757-29019523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
78, 53
               

               
Conread position:
               
156-389
               

               
Cow position:
               
chr27:13638999-13638768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
156-396
               

               
Cow position:
               
chr27:21669124-21668894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
213, 27
               

               
Conread position:
               
156-398
               

               
Cow position:
               
chr27:22171295-22171532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
220, 74
               

               
Conread position:
               
156-398
               

               
Cow position:
               
chr27:25379988-25380224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 81
               

               
Conread position:
               
156-403
               

               
Cow position:
               
chr27:26807568-26807325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
218, 73
               

               
Conread position:
               
156-406
               

               
Cow position:
               
chr27:30362241-30362487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 21
               

               
Conread position:
               
156-407
               

               
Cow position:
               
chr27:4829806-4829568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
155, 51
               

               
Conread position:
               
156-407
               

               
Cow position:
               
chr27:22723710-22723464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 108
               

               
Conread position:
               
156-407
               

               
Cow position:
               
chr27:23455160-23454905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
73, 199
               

               
Conread position:
               
156-408
               

               
Cow position:
               
chr27:22440135-22440388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
201, 37
               

               
Conread position:
               
156-409
               

               
Cow position:
               
chr27:16263336-16263574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
156-422
               

               
Cow position:
               
chr27:23576544-23576281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
201, 87
               

               
Conread position:
               
157-367
               

               
Cow position:
               
chr27:19546515-19546303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
157-375
               

               
Cow position:
               
chr27:25790799-25791013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
157-389
               

               
Cow position:
               
chr27:6058497-6058726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
157-398
               

               
Cow position:
               
chr27:4386065-4385832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
197, 73
               

               
Conread position:
               
157-398
               

               
Cow position:
               
chr27:13411367-13411127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
104, 72
               

               
Conread position:
               
157-398
               

               
Cow position:
               
chr27:25809525-25809290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
157-400
               

               
Cow position:
               
chr27:7935162-7934928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
219, 72
               

               
Conread position:
               
158-392
               

               
Cow position:
               
chr27:24559448-24559220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
158-398
               

               
Cow position:
               
chr27:13875728-13875961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 79
               

               
Conread position:
               
158-398
               

               
Cow position:
               
chr27:15349817-15349570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 59
               

               
Conread position:
               
158-407
               

               
Cow position:
               
chr27:8062355-8062117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
177, 14
               

               
Conread position:
               
158-407
               

               
Cow position:
               
chr27:13197917-13198151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
159-307
               

               
Cow position:
               
chr27:17331497-17331644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
159-386
               

               
Cow position:
               
chr27:16478341-16478128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 31
               

               
Conread position:
               
159-407
               

               
Cow position:
               
chr27:8629875-8629629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
218, 70
               

               
Conread position:
               
160-291
               

               
Cow position:
               
chr27:8168432-8168300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
160-292
               

               
Cow position:
               
chr27:26857197-26857064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
160-352
               

               
Cow position:
               
chr27:10992356-10992540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
160-364
               

               
Cow position:
               
chr27:911086-910886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 92
               

               
Conread position:
               
160-370
               

               
Cow position:
               
chr27:2683145-2682939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
68, 105
               

               
Conread position:
               
160-374
               

               
Cow position:
               
chr27:29283410-29283203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
160-388
               

               
Cow position:
               
chr27:11762735-11762516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
219, 53
               

               
Conread position:
               
160-388
               

               
Cow position:
               
chr27:26625130-26625344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 42
               

               
Conread position:
               
160-388
               

               
Cow position:
               
chr27:30374574-30374347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
160-398
               

               
Cow position:
               
chr27:7971568-7971803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
216, 99
               

               
Conread position:
               
160-398
               

               
Cow position:
               
chr27:15315504-15315722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
67, 85
               

               
Conread position:
               
160-407
               

               
Cow position:
               
chr27:21978140-21977892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
71, 123
               

               
Conread position:
               
160-413
               

               
Cow position:
               
chr27:23070360-23070112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 75
               

               
Conread position:
               
161-325
               

               
Cow position:
               
chr27:11480631-11480470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
70, 116
               

               
Conread position:
               
161-399
               

               
Cow position:
               
chr27:15271911-15272140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
73, 43
               

               
Conread position:
               
162-357
               

               
Cow position:
               
chr27:27554682-27554495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
153, 90
               

               
Conread position:
               
162-398
               

               
Cow position:
               
chr27:11723905-11723671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
218, 47
               

               
Conread position:
               
162-413
               

               
Cow position:
               
chr27:11412720-11412967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
162-438
               

               
Cow position:
               
chr27:26935908-26935645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
192, 40
               

               
Conread position:
               
163-389
               

               
Cow position:
               
chr27:4390253-4390030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
210, 51
               

               
Conread position:
               
163-398
               

               
Cow position:
               
chr27:30407035-30406798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
110, 74
               

               
Conread position:
               
163-407
               

               
Cow position:
               
chr27:4983604-4983356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
211, 0
               

               
Conread position:
               
163-407
               

               
Cow position:
               
chr27:26428131-26427883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
163-408
               

               
Cow position:
               
chr27:26785988-26785736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 65
               

               
Conread position:
               
163-413
               

               
Cow position:
               
chr27:15871159-15871413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
164-358
               

               
Cow position:
               
chr27:18739387-18739580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
70, 129
               

               
Conread position:
               
164-367
               

               
Cow position:
               
chr27:24026977-24027173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
164-382
               

               
Cow position:
               
chr27:22771754-22771975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
164-398
               

               
Cow position:
               
chr27:11815755-11815526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
164-398
               

               
Cow position:
               
chr27:21408558-21408315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
164-405
               

               
Cow position:
               
chr27:19717927-19718159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
212, 20
               

               
Conread position:
               
164-407
               

               
Cow position:
               
chr27:16619991-16620233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 75
               

               
Conread position:
               
164-407
               

               
Cow position:
               
chr27:22426829-22426585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
60, 108
               

               
Conread position:
               
164-413
               

               
Cow position:
               
chr27:1903062-1903314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
165-303
               

               
Cow position:
               
chr27:20918894-20919030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
165-387
               

               
Cow position:
               
chr27:22179788-22179575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
212, 17
               

               
Conread position:
               
166-367
               

               
Cow position:
               
chr27:20869687-20869499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
166-374
               

               
Cow position:
               
chr27:14435546-14435753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
166-398
               

               
Cow position:
               
chr27:1675374-1675603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
208, 64
               

               
Conread position:
               
166-398
               

               
Cow position:
               
chr27:11489273-11489045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
211, 62
               

               
Conread position:
               
166-398
               

               
Cow position:
               
chr27:13410169-13409935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
166-398
               

               
Cow position:
               
chr27:28907068-28907301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
209, 0
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr27:26463886-26463652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr27:26584306-26584538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 27
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr27:26787359-26787130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
208, 128
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr27:27700025-27699791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr27:29140451-29140685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-404
               

               
Cow position:
               
chr27:11482090-11481858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
230, 124
               

               
Conread position:
               
166-406
               

               
Cow position:
               
chr27:1030386-1030627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-406
               

               
Cow position:
               
chr27:15644457-15644213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:32963-32718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:724715-724470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:773153-773398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:1521850-1521605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 44
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:1523174-1522929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:2002015-2001770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:2390295-2390540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:3339788-3340033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:3638824-3638579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:3690473-3690718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:4769486-4769241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:4881608-4881853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:5836998-5836754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
210, 73
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:5881698-5881454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
208, 112
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:8187993-8187748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:11094656-11094901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 44
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:11417892-11417647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:12005510-12005755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:12016342-12016585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
233, 214
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:12148063-12147818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:12502285-12502040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:12751684-12751444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
221, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:13442847-13442593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:14129506-14129748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
180, 164
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:14298359-14298115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
210, 62
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:14906732-14906976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
210, 176
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:15032724-15032966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
211, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:15100810-15100565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:17402896-17403141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:18446582-18446336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:18811687-18811932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:19325500-19325745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:19423203-19423449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:19522538-19522783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:19552428-19552183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:22655377-22655132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:23015858-23016101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
208, 112
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:23080257-23080012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:24240948-24241193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:26331072-26330827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:26341621-26341376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:27810066-27809821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:28984937-28984696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
210, 112
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:29035211-29035456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:29198545-29198300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:30683908-30684153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr27:31566584-31566339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-408
               

               
Cow position:
               
chr27:10081665-10081420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
210, 224
               

               
Conread position:
               
166-408
               

               
Cow position:
               
chr27:16182081-16182310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
210, 50
               

               
Conread position:
               
166-410
               

               
Cow position:
               
chr27:11651079-11651327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
166-413
               

               
Cow position:
               
chr27:21393495-21393253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
166-414
               

               
Cow position:
               
chr27:2332667-2332416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-425
               

               
Cow position:
               
chr27:2930594-2930335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
68, 114
               

               
Conread position:
               
167-407
               

               
Cow position:
               
chr27:9335357-9335116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
167-407
               

               
Cow position:
               
chr27:30361207-30361451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
168-407
               

               
Cow position:
               
chr27:19931158-19931398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
208, 121
               

               
Conread position:
               
169-318
               

               
Cow position:
               
chr27:7731243-7731096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 109
               

               
Conread position:
               
169-407
               

               
Cow position:
               
chr27:8973610-8973371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
169, 157
               

               
Conread position:
               
169-407
               

               
Cow position:
               
chr27:12240308-12240071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
164, 56
               

               
Conread position:
               
170-375
               

               
Cow position:
               
chr27:29309033-29309235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
170-389
               

               
Cow position:
               
chr27:3554307-3554528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 46
               

               
Conread position:
               
170-399
               

               
Cow position:
               
chr27:10580105-10579875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
170-406
               

               
Cow position:
               
chr27:5853919-5853674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
85, 156
               

               
Conread position:
               
170-407
               

               
Cow position:
               
chr27:6073929-6074161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
172-321
               

               
Cow position:
               
chr27:9031526-9031675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
172-407
               

               
Cow position:
               
chr27:21349736-21349503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
204, 107
               

               
Conread position:
               
173-375
               

               
Cow position:
               
chr27:13317947-13317745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
173-380
               

               
Cow position:
               
chr27:21453064-21452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
173-397
               

               
Cow position:
               
chr27:25783616-25783834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
173-405
               

               
Cow position:
               
chr27:21419056-21418829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
173-407
               

               
Cow position:
               
chr27:732581-732808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
65, 90
               

               
Conread position:
               
173-413
               

               
Cow position:
               
chr27:28018345-28018585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 71
               

               
Conread position:
               
173-413
               

               
Cow position:
               
chr27:29798952-29799195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
174-388
               

               
Cow position:
               
chr27:19543895-19543686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
38, 106
               

               
Conread position:
               
175-335
               

               
Cow position:
               
chr27:28496365-28496205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
175-379
               

               
Cow position:
               
chr27:20067962-20067765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
201, 31
               

               
Conread position:
               
175-407
               

               
Cow position:
               
chr27:67219-66983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
175-407
               

               
Cow position:
               
chr27:651948-651712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
175-407
               

               
Cow position:
               
chr27:20372818-20372581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
175-407
               

               
Cow position:
               
chr27:27630732-27630496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
175-408
               

               
Cow position:
               
chr27:18507656-18507878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
201, 46
               

               
Conread position:
               
175-422
               

               
Cow position:
               
chr27:27449415-27449179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
177-388
               

               
Cow position:
               
chr27:4825099-4824899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
177-407
               

               
Cow position:
               
chr27:7591673-7591440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 147
               

               
Conread position:
               
178-316
               

               
Cow position:
               
chr27:30483155-30483294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
180-398
               

               
Cow position:
               
chr27:26436862-26436641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
58, 87
               

               
Conread position:
               
183-407
               

               
Cow position:
               
chr27:30921185-30921396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
184-398
               

               
Cow position:
               
chr27:16284492-16284706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
192, 53
               

               
Conread position:
               
185-309
               

               
Cow position:
               
chr27:16589691-16589569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
185-380
               

               
Cow position:
               
chr27:26799540-26799341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
185-407
               

               
Cow position:
               
chr27:14530825-14530599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
185-413
               

               
Cow position:
               
chr27:16960221-16960448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
191, 97
               

               
Conread position:
               
186-381
               

               
Cow position:
               
chr27:26163409-26163594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
186-389
               

               
Cow position:
               
chr27:4835584-4835382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
191, 23
               

               
Conread position:
               
186-389
               

               
Cow position:
               
chr27:15200718-15200921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
186-392
               

               
Cow position:
               
chr27:16041755-16041548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
186-398
               

               
Cow position:
               
chr27:26643705-26643906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
190, 49
               

               
Conread position:
               
186-407
               

               
Cow position:
               
chr27:10384582-10384357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
186-407
               

               
Cow position:
               
chr27:13837336-13837561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
186-407
               

               
Cow position:
               
chr27:16513859-16513637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
186-408
               

               
Cow position:
               
chr27:7426119-7425893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
186-408
               

               
Cow position:
               
chr27:28206819-28207044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
190, 41
               

               
Conread position:
               
186-413
               

               
Cow position:
               
chr27:26952554-26952788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
187-333
               

               
Cow position:
               
chr27:28009035-28008891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 96
               

               
Conread position:
               
187-356
               

               
Cow position:
               
chr27:30989819-30989652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
158, 72
               

               
Conread position:
               
187-389
               

               
Cow position:
               
chr27:2012078-2011879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
187-407
               

               
Cow position:
               
chr27:5882491-5882268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
187-407
               

               
Cow position:
               
chr27:31372266-31372052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
187-413
               

               
Cow position:
               
chr27:15343083-15342881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
188-367
               

               
Cow position:
               
chr27:28061737-28061561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
169, 40
               

               
Conread position:
               
188-407
               

               
Cow position:
               
chr27:164703-164925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
188, 166
               

               
Conread position:
               
189-413
               

               
Cow position:
               
chr27:15454239-15454464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
163, 48
               

               
Conread position:
               
190-356
               

               
Cow position:
               
chr27:27856359-27856524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
190-375
               

               
Cow position:
               
chr27:26239054-26239233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
190-380
               

               
Cow position:
               
chr27:20553749-20553932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
186, 38
               

               
Conread position:
               
190-407
               

               
Cow position:
               
chr27:27521982-27521759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
192-357
               

               
Cow position:
               
chr27:23558363-23558194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
193-398
               

               
Cow position:
               
chr27:7412409-7412616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
29, 48
               

               
Conread position:
               
193-407
               

               
Cow position:
               
chr27:18922482-18922695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
193-413
               

               
Cow position:
               
chr27:6674267-6674487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
194-388
               

               
Cow position:
               
chr27:31217135-31216942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
194-395
               

               
Cow position:
               
chr27:26865087-26864889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
194-398
               

               
Cow position:
               
chr27:10582397-10582596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
182, 65
               

               
Conread position:
               
194-401
               

               
Cow position:
               
chr27:30185322-30185528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
194-407
               

               
Cow position:
               
chr27:160518-160735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
194-407
               

               
Cow position:
               
chr27:26597906-26598120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
180, 11
               

               
Conread position:
               
195-407
               

               
Cow position:
               
chr27:30389185-30388971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
161, 42
               

               
Conread position:
               
198-376
               

               
Cow position:
               
chr27:7495292-7495467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
156, 9
               

               
Conread position:
               
198-407
               

               
Cow position:
               
chr27:4805872-4805663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
111, 39
               

               
Conread position:
               
198-407
               

               
Cow position:
               
chr27:9045692-9045906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
198-407
               

               
Cow position:
               
chr27:22394206-22394414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
178, 44
               

               
Conread position:
               
199-406
               

               
Cow position:
               
chr27:18955163-18954956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
200-407
               

               
Cow position:
               
chr27:8195257-8195461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
137, 9
               

               
Conread position:
               
200-413
               

               
Cow position:
               
chr27:9977855-9978077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
201-408
               

               
Cow position:
               
chr27:9337557-9337759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
204-405
               

               
Cow position:
               
chr27:12650589-12650390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
206-398
               

               
Cow position:
               
chr27:7290063-7289876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
170, 68
               

               
Conread position:
               
207-372
               

               
Cow position:
               
chr27:1884083-1884244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
132, 30
               

               
Conread position:
               
207-401
               

               
Cow position:
               
chr27:30884146-30884340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 135
               

               
Conread position:
               
211-375
               

               
Cow position:
               
chr27:26406992-26406834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
214-407
               

               
Cow position:
               
chr27:2901193-2900996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr27:26617422-26617612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
158, 21
               

               
Conread position:
               
216-414
               

               
Cow position:
               
chr27:13860688-13860493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
158, 21
               

               
Conread position:
               
218-337
               

               
Cow position:
               
chr27:26322407-26322525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr27:30508704-30508540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
220-407
               

               
Cow position:
               
chr27:8589453-8589258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
221-398
               

               
Cow position:
               
chr27:22609083-22608903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
221-413
               

               
Cow position:
               
chr27:264307-264497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
13, 108
               

               
Conread position:
               
222-407
               

               
Cow position:
               
chr27:4719833-4719650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
223-389
               

               
Cow position:
               
chr27:20481343-20481176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 37
               

               
Conread position:
               
223-421
               

               
Cow position:
               
chr27:16099964-16099764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
129, 171
               

               
Conread position:
               
224-407
               

               
Cow position:
               
chr27:26015472-26015658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
150, 50
               

               
Conread position:
               
228-407
               

               
Cow position:
               
chr27:13902232-13902049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
229-398
               

               
Cow position:
               
chr27:26314134-26313966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
147, 114
               

               
Conread position:
               
229-407
               

               
Cow position:
               
chr27:16331404-16331582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
148, 51
               

               
Conread position:
               
230-355
               

               
Cow position:
               
chr27:68374-68252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
230-398
               

               
Cow position:
               
chr27:1173480-1173310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
230-399
               

               
Cow position:
               
chr27:4928452-4928281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
230-407
               

               
Cow position:
               
chr27:3256110-3256283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
123, 48
               

               
Conread position:
               
230-407
               

               
Cow position:
               
chr27:18438972-18439143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
160, 49
               

               
Conread position:
               
231-367
               

               
Cow position:
               
chr27:13847708-13847840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
231-371
               

               
Cow position:
               
chr27:190778-190918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
231-371
               

               
Cow position:
               
chr27:31267213-31267075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
231-375
               

               
Cow position:
               
chr27:30476066-30476209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
231-398
               

               
Cow position:
               
chr27:6899650-6899482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
10, 55
               

               
Conread position:
               
231-398
               

               
Cow position:
               
chr27:26595498-26595661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr27:490957-491132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
145, 47
               

               
Conread position:
               
232-375
               

               
Cow position:
               
chr27:17924243-17924100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
91, 138
               

               
Conread position:
               
232-407
               

               
Cow position:
               
chr27:943590-943410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
232-407
               

               
Cow position:
               
chr27:20866456-20866285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
142, 47
               

               
Conread position:
               
232-407
               

               
Cow position:
               
chr27:26545852-26545678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
144, 18
               

               
Conread position:
               
232-413
               

               
Cow position:
               
chr27:15926842-15927023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
144, 45
               

               
Conread position:
               
233-398
               

               
Cow position:
               
chr27:23452550-23452713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
234-380
               

               
Cow position:
               
chr27:27528289-27528146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
142, 44
               

               
Conread position:
               
234-407
               

               
Cow position:
               
chr27:26653370-26653550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
236-413
               

               
Cow position:
               
chr27:22293636-22293461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
140, 43
               

               
Conread position:
               
245-407
               

               
Cow position:
               
chr27:20092534-20092372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
131, 43
               

               
Conread position:
               
248-358
               

               
Cow position:
               
chr27:23736172-23736282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
248-407
               

               
Cow position:
               
chr27:13977310-13977145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
126, 106
               

               
Conread position:
               
249-398
               

               
Cow position:
               
chr27:27455372-27455224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
127, 100
               

               
Conread position:
               
253-405
               

               
Cow position:
               
chr27:4330676-4330828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
123, 144
               

               
Conread position:
               
253-413
               

               
Cow position:
               
chr27:26984430-26984590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
118, 46
               

               
Conread position:
               
255-406
               

               
Cow position:
               
chr27:23502553-23502705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
256-398
               

               
Cow position:
               
chr27:427216-427358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
121, 98
               

               
Conread position:
               
256-413
               

               
Cow position:
               
chr27:17646106-17645947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
257-393
               

               
Cow position:
               
chr27:14910608-14910473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
259-407
               

               
Cow position:
               
chr27:13273913-13273764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
260-407
               

               
Cow position:
               
chr27:23595371-23595515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
116, 18
               

               
Conread position:
               
260-407
               

               
Cow position:
               
chr27:28146554-28146404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
262-385
               

               
Cow position:
               
chr27:29503037-29502914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
264-403
               

               
Cow position:
               
chr27:23511220-23511360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
265-407
               

               
Cow position:
               
chr27:15632499-15632642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
269-413
               

               
Cow position:
               
chr27:16983892-16984038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 40
               

               
Conread position:
               
279-380
               

               
Cow position:
               
chr27:1564940-1565041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
97, 75
               

               
Conread position:
               
282-375
               

               
Cow position:
               
chr27:20561821-20561914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
284-398
               

               
Cow position:
               
chr27:23083672-23083788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 114
               

               
Conread position:
               
285-398
               

               
Cow position:
               
chr27:21283197-21283311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               
Show alignments to all cow chromosomes.