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Cow genome map

           
Conread name:
           
Ss1.1-rnbm29b_l4.5
        

               
Conread position:
               
138-303
               

               
Cow position:
               
chr28:14720794-14720953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
138-407
               

               
Cow position:
               
chr28:11931398-11931669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
236, 15
               

               
Conread position:
               
138-408
               

               
Cow position:
               
chr28:23840186-23839928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
239, 101
               

               
Conread position:
               
138-413
               

               
Cow position:
               
chr28:13356591-13356871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
67, 154
               

               
Conread position:
               
138-413
               

               
Cow position:
               
chr28:26269316-26269042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
139-303
               

               
Cow position:
               
chr28:26264791-26264628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
7, 143
               

               
Conread position:
               
139-315
               

               
Cow position:
               
chr28:118068-118243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
139-327
               

               
Cow position:
               
chr28:18186540-18186345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
11, 92
               

               
Conread position:
               
139-327
               

               
Cow position:
               
chr28:27313762-27313948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
139-335
               

               
Cow position:
               
chr28:5437103-5437299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
139-335
               

               
Cow position:
               
chr28:25283182-25282997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
139-336
               

               
Cow position:
               
chr28:3714783-3714593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
139-354
               

               
Cow position:
               
chr28:12987393-12987174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
139-365
               

               
Cow position:
               
chr28:23776030-23775808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
139-367
               

               
Cow position:
               
chr28:11422831-11423043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
139-367
               

               
Cow position:
               
chr28:26220240-26220022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
139-373
               

               
Cow position:
               
chr28:14649333-14649102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
139-375
               

               
Cow position:
               
chr28:8022126-8022358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
139-375
               

               
Cow position:
               
chr28:13865828-13865598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
139-375
               

               
Cow position:
               
chr28:22321409-22321175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
139-379
               

               
Cow position:
               
chr28:3078699-3078930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
236, 59
               

               
Conread position:
               
139-379
               

               
Cow position:
               
chr28:13607871-13607633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 93
               

               
Conread position:
               
139-379
               

               
Cow position:
               
chr28:14512505-14512274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
139-382
               

               
Cow position:
               
chr28:27218306-27218065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 9
               

               
Conread position:
               
139-385
               

               
Cow position:
               
chr28:17029735-17029973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
139-385
               

               
Cow position:
               
chr28:19079863-19080107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
139-386
               

               
Cow position:
               
chr28:19026026-19026262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
28, 100
               

               
Conread position:
               
139-386
               

               
Cow position:
               
chr28:31971770-31972006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
139-387
               

               
Cow position:
               
chr28:3492801-3493044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
73, 79
               

               
Conread position:
               
139-387
               

               
Cow position:
               
chr28:32300372-32300620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 103
               

               
Conread position:
               
139-389
               

               
Cow position:
               
chr28:16243774-16244021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 76
               

               
Conread position:
               
139-396
               

               
Cow position:
               
chr28:28164071-28163827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
139-398
               

               
Cow position:
               
chr28:15263732-15263995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 246
               

               
Conread position:
               
139-398
               

               
Cow position:
               
chr28:18139474-18139727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
139-398
               

               
Cow position:
               
chr28:21868439-21868180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 98
               

               
Conread position:
               
139-398
               

               
Cow position:
               
chr28:26743608-26743351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
55, 126
               

               
Conread position:
               
139-399
               

               
Cow position:
               
chr28:5128747-5128999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
139-404
               

               
Cow position:
               
chr28:12942364-12942108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
7, 103
               

               
Conread position:
               
139-406
               

               
Cow position:
               
chr28:11585220-11585490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr28:4880284-4880547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 45
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr28:5684690-5684421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr28:7267960-7268216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
237, 43
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr28:7549076-7549345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 89
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr28:7607218-7606951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr28:7865309-7865048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr28:9426368-9426625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
101, 74
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr28:11426558-11426827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 98
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr28:11527276-11527537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr28:18934436-18934178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr28:20124766-20124506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
238, 9
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr28:21844940-21844673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr28:34082032-34082301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
16, 116
               

               
Conread position:
               
139-408
               

               
Cow position:
               
chr28:4070954-4070680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
139-408
               

               
Cow position:
               
chr28:9390381-9390649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 78
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr28:4282508-4282781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 10
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr28:4588082-4587807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr28:5817822-5817558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 19
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr28:10606643-10606901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr28:10681839-10682111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr28:16085307-16085036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 46
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr28:21598270-21598542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 98
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr28:28765921-28766199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
238, 0
               

               
Conread position:
               
139-420
               

               
Cow position:
               
chr28:7697996-7698277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 146
               

               
Conread position:
               
140-306
               

               
Cow position:
               
chr28:13290150-13290313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
140-311
               

               
Cow position:
               
chr28:2752511-2752684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
6, 82
               

               
Conread position:
               
140-346
               

               
Cow position:
               
chr28:2737825-2738030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
140-363
               

               
Cow position:
               
chr28:33036491-33036701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
140-374
               

               
Cow position:
               
chr28:17355880-17356110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
91, 33
               

               
Conread position:
               
140-375
               

               
Cow position:
               
chr28:8416129-8416362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 52
               

               
Conread position:
               
140-380
               

               
Cow position:
               
chr28:33052014-33051767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
140-381
               

               
Cow position:
               
chr28:25596609-25596378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
237, 63
               

               
Conread position:
               
140-383
               

               
Cow position:
               
chr28:29199701-29199471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
236, 18
               

               
Conread position:
               
140-389
               

               
Cow position:
               
chr28:20409373-20409141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
217, 44
               

               
Conread position:
               
140-389
               

               
Cow position:
               
chr28:24343353-24343110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
93, 67
               

               
Conread position:
               
140-395
               

               
Cow position:
               
chr28:21672778-21672531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
140-398
               

               
Cow position:
               
chr28:15008144-15007890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
220, 89
               

               
Conread position:
               
140-399
               

               
Cow position:
               
chr28:5204174-5203930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
140-405
               

               
Cow position:
               
chr28:31649062-31648795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
13, 122
               

               
Conread position:
               
140-406
               

               
Cow position:
               
chr28:26784482-26784750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 139
               

               
Conread position:
               
140-407
               

               
Cow position:
               
chr28:4307920-4308181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
15, 127
               

               
Conread position:
               
140-407
               

               
Cow position:
               
chr28:8787521-8787267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
236, 21
               

               
Conread position:
               
140-413
               

               
Cow position:
               
chr28:2124411-2124150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
93, 108
               

               
Conread position:
               
140-413
               

               
Cow position:
               
chr28:16109918-16109664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
140-414
               

               
Cow position:
               
chr28:16363986-16364261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
88, 24
               

               
Conread position:
               
141-275
               

               
Cow position:
               
chr28:30746747-30746879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
141-347
               

               
Cow position:
               
chr28:5074528-5074724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
141-348
               

               
Cow position:
               
chr28:18625213-18625002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
141-357
               

               
Cow position:
               
chr28:751211-750997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
141-359
               

               
Cow position:
               
chr28:5144537-5144754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
141-364
               

               
Cow position:
               
chr28:34430439-34430663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
141-386
               

               
Cow position:
               
chr28:23621526-23621289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
235, 73
               

               
Conread position:
               
141-386
               

               
Cow position:
               
chr28:26922384-26922623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
17, 101
               

               
Conread position:
               
141-389
               

               
Cow position:
               
chr28:16252877-16253117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 123
               

               
Conread position:
               
141-396
               

               
Cow position:
               
chr28:20313257-20313006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
141-398
               

               
Cow position:
               
chr28:21380860-21380610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 96
               

               
Conread position:
               
141-407
               

               
Cow position:
               
chr28:11752161-11752428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 57
               

               
Conread position:
               
141-407
               

               
Cow position:
               
chr28:12964550-12964294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
141-407
               

               
Cow position:
               
chr28:15998278-15998549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
141-407
               

               
Cow position:
               
chr28:26782067-26781800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
235, 22
               

               
Conread position:
               
141-410
               

               
Cow position:
               
chr28:10533952-10534215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
235, 66
               

               
Conread position:
               
141-413
               

               
Cow position:
               
chr28:10900801-10900531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
141-413
               

               
Cow position:
               
chr28:12946928-12946655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
92, 40
               

               
Conread position:
               
142-315
               

               
Cow position:
               
chr28:4834867-4835033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
142-335
               

               
Cow position:
               
chr28:4884282-4884474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
142-389
               

               
Cow position:
               
chr28:18462630-18462874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
12, 52
               

               
Conread position:
               
142-396
               

               
Cow position:
               
chr28:31871766-31872016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
142-398
               

               
Cow position:
               
chr28:11687047-11687296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
142-407
               

               
Cow position:
               
chr28:6546400-6546673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
142-407
               

               
Cow position:
               
chr28:10642036-10642299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
142-407
               

               
Cow position:
               
chr28:18790999-18790729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 163
               

               
Conread position:
               
142-407
               

               
Cow position:
               
chr28:23312331-23312599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
232, 34
               

               
Conread position:
               
142-408
               

               
Cow position:
               
chr28:4022366-4022098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 127
               

               
Conread position:
               
142-408
               

               
Cow position:
               
chr28:21355204-21354940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 86
               

               
Conread position:
               
143-292
               

               
Cow position:
               
chr28:29989135-29989281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
143-309
               

               
Cow position:
               
chr28:28903688-28903848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
94, 120
               

               
Conread position:
               
143-313
               

               
Cow position:
               
chr28:11866687-11866855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 42
               

               
Conread position:
               
143-354
               

               
Cow position:
               
chr28:26685093-26684886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
143-386
               

               
Cow position:
               
chr28:6051713-6051477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
143-398
               

               
Cow position:
               
chr28:16770567-16770321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
143-398
               

               
Cow position:
               
chr28:25700893-25701129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
233, 66
               

               
Conread position:
               
143-399
               

               
Cow position:
               
chr28:616363-616131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
234, 86
               

               
Conread position:
               
143-400
               

               
Cow position:
               
chr28:29455676-29455930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
143-402
               

               
Cow position:
               
chr28:34208688-34208432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
143-407
               

               
Cow position:
               
chr28:15285561-15285827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
231, 10
               

               
Conread position:
               
143-407
               

               
Cow position:
               
chr28:27479004-27478739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
121, 10
               

               
Conread position:
               
143-408
               

               
Cow position:
               
chr28:10615980-10616234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
233, 34
               

               
Conread position:
               
143-408
               

               
Cow position:
               
chr28:21363725-21363474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
233, 87
               

               
Conread position:
               
143-413
               

               
Cow position:
               
chr28:6971371-6971628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
233, 62
               

               
Conread position:
               
144-326
               

               
Cow position:
               
chr28:4138688-4138868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 97
               

               
Conread position:
               
144-348
               

               
Cow position:
               
chr28:13447676-13447488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
144-388
               

               
Cow position:
               
chr28:4841420-4841656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 37
               

               
Conread position:
               
144-389
               

               
Cow position:
               
chr28:11827467-11827234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
94, 38
               

               
Conread position:
               
144-389
               

               
Cow position:
               
chr28:16204351-16204592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 17
               

               
Conread position:
               
144-398
               

               
Cow position:
               
chr28:23676116-23675873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 12
               

               
Conread position:
               
144-407
               

               
Cow position:
               
chr28:19295381-19295645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
216, 93
               

               
Conread position:
               
145-277
               

               
Cow position:
               
chr28:10057611-10057745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
147-380
               

               
Cow position:
               
chr28:2862840-2862608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 21
               

               
Conread position:
               
148-404
               

               
Cow position:
               
chr28:11380068-11380319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
148-407
               

               
Cow position:
               
chr28:5904705-5904453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
228, 13
               

               
Conread position:
               
149-314
               

               
Cow position:
               
chr28:4881263-4881431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
79, 137
               

               
Conread position:
               
149-335
               

               
Cow position:
               
chr28:9108420-9108234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
68, 58
               

               
Conread position:
               
149-360
               

               
Cow position:
               
chr28:2131954-2132155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
149-362
               

               
Cow position:
               
chr28:11884546-11884757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
149-364
               

               
Cow position:
               
chr28:28076436-28076644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
149-379
               

               
Cow position:
               
chr28:8348679-8348905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
149-385
               

               
Cow position:
               
chr28:6861928-6861695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
190, 79
               

               
Conread position:
               
149-386
               

               
Cow position:
               
chr28:25071097-25070857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
149-398
               

               
Cow position:
               
chr28:13474274-13474037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
149-398
               

               
Cow position:
               
chr28:33163490-33163729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
227, 89
               

               
Conread position:
               
149-405
               

               
Cow position:
               
chr28:19222623-19222875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
149-407
               

               
Cow position:
               
chr28:3914685-3914427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 138
               

               
Conread position:
               
149-413
               

               
Cow position:
               
chr28:12619541-12619276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 7
               

               
Conread position:
               
149-433
               

               
Cow position:
               
chr28:24367959-24368256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
150-314
               

               
Cow position:
               
chr28:3105223-3105052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 148
               

               
Conread position:
               
150-353
               

               
Cow position:
               
chr28:1837967-1837767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 81
               

               
Conread position:
               
150-388
               

               
Cow position:
               
chr28:11451491-11451728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 23
               

               
Conread position:
               
150-413
               

               
Cow position:
               
chr28:7751330-7751590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 52
               

               
Conread position:
               
152-414
               

               
Cow position:
               
chr28:2819729-2819469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 32
               

               
Conread position:
               
153-274
               

               
Cow position:
               
chr28:25728169-25728049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
153-313
               

               
Cow position:
               
chr28:19024110-19023947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
85, 49
               

               
Conread position:
               
153-320
               

               
Cow position:
               
chr28:26982767-26982940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
153-358
               

               
Cow position:
               
chr28:11817997-11818191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
153-380
               

               
Cow position:
               
chr28:26103678-26103463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
80, 60
               

               
Conread position:
               
153-384
               

               
Cow position:
               
chr28:6307860-6307635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
153-385
               

               
Cow position:
               
chr28:8408704-8408479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
201, 76
               

               
Conread position:
               
153-385
               

               
Cow position:
               
chr28:21502363-21502137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
86, 45
               

               
Conread position:
               
153-386
               

               
Cow position:
               
chr28:25424330-25424562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr28:28414643-28414410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr28:34133829-34133604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
216, 23
               

               
Conread position:
               
153-389
               

               
Cow position:
               
chr28:9176785-9177016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
223, 61
               

               
Conread position:
               
153-389
               

               
Cow position:
               
chr28:24996619-24996851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
141, 72
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr28:2814538-2814770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
223, 56
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr28:14998034-14997793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
223, 84
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr28:16214934-16215162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
221, 84
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr28:23007764-23007999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
199, 76
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr28:24966354-24966117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
165, 49
               

               
Conread position:
               
153-399
               

               
Cow position:
               
chr28:6059501-6059744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
153-399
               

               
Cow position:
               
chr28:23410355-23410597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 104
               

               
Conread position:
               
153-399
               

               
Cow position:
               
chr28:25727340-25727109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
223, 32
               

               
Conread position:
               
153-402
               

               
Cow position:
               
chr28:17288188-17287949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
147, 74
               

               
Conread position:
               
153-407
               

               
Cow position:
               
chr28:3143916-3144170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 131
               

               
Conread position:
               
153-407
               

               
Cow position:
               
chr28:4215345-4215087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
153-407
               

               
Cow position:
               
chr28:16407060-16406804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
223, 86
               

               
Conread position:
               
153-407
               

               
Cow position:
               
chr28:16412716-16412465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
103, 54
               

               
Conread position:
               
153-407
               

               
Cow position:
               
chr28:22170746-22171002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 133
               

               
Conread position:
               
153-408
               

               
Cow position:
               
chr28:5769168-5768909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
153-408
               

               
Cow position:
               
chr28:34878000-34878254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
85, 123
               

               
Conread position:
               
153-413
               

               
Cow position:
               
chr28:3256767-3256512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
223, 75
               

               
Conread position:
               
153-413
               

               
Cow position:
               
chr28:5826921-5826659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
153-413
               

               
Cow position:
               
chr28:14933936-14933673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 206
               

               
Conread position:
               
153-430
               

               
Cow position:
               
chr28:31987580-31987302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
153-433
               

               
Cow position:
               
chr28:5792676-5792400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
81, 134
               

               
Conread position:
               
156-305
               

               
Cow position:
               
chr28:15944121-15943971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
156-313
               

               
Cow position:
               
chr28:18760081-18760228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
156-357
               

               
Cow position:
               
chr28:8656774-8656965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
156-358
               

               
Cow position:
               
chr28:9099901-9099704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 54
               

               
Conread position:
               
156-358
               

               
Cow position:
               
chr28:12951396-12951202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
156-367
               

               
Cow position:
               
chr28:9636486-9636696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
61, 40
               

               
Conread position:
               
156-370
               

               
Cow position:
               
chr28:25249321-25249113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
156-380
               

               
Cow position:
               
chr28:5773603-5773389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
220, 64
               

               
Conread position:
               
156-388
               

               
Cow position:
               
chr28:26719317-26719099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
219, 72
               

               
Conread position:
               
156-389
               

               
Cow position:
               
chr28:7547360-7547606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
74, 235
               

               
Conread position:
               
156-396
               

               
Cow position:
               
chr28:26614851-26614626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
156-398
               

               
Cow position:
               
chr28:3746170-3745932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
156-398
               

               
Cow position:
               
chr28:7144756-7144519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
156-398
               

               
Cow position:
               
chr28:13267753-13267509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
156-406
               

               
Cow position:
               
chr28:2279699-2279948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
203, 51
               

               
Conread position:
               
156-406
               

               
Cow position:
               
chr28:16416119-16415873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
220, 49
               

               
Conread position:
               
156-407
               

               
Cow position:
               
chr28:8347698-8347439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
200, 120
               

               
Conread position:
               
156-407
               

               
Cow position:
               
chr28:18354357-18354599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
214, 42
               

               
Conread position:
               
156-408
               

               
Cow position:
               
chr28:31110037-31110289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 120
               

               
Conread position:
               
156-413
               

               
Cow position:
               
chr28:15374855-15375111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 60
               

               
Conread position:
               
157-333
               

               
Cow position:
               
chr28:22739758-22739595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
157-362
               

               
Cow position:
               
chr28:3077955-3077759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
157-386
               

               
Cow position:
               
chr28:5931319-5931094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
157-407
               

               
Cow position:
               
chr28:7228419-7228663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 45
               

               
Conread position:
               
157-407
               

               
Cow position:
               
chr28:16401864-16401615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
219, 74
               

               
Conread position:
               
157-414
               

               
Cow position:
               
chr28:7684717-7684968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
219, 49
               

               
Conread position:
               
158-407
               

               
Cow position:
               
chr28:25806537-25806314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
217, 119
               

               
Conread position:
               
159-328
               

               
Cow position:
               
chr28:25459492-25459325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
130, 104
               

               
Conread position:
               
159-335
               

               
Cow position:
               
chr28:29416756-29416924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
159-398
               

               
Cow position:
               
chr28:7590217-7590455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 128
               

               
Conread position:
               
159-398
               

               
Cow position:
               
chr28:8681878-8682122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
100, 68
               

               
Conread position:
               
159-398
               

               
Cow position:
               
chr28:23616372-23616131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
159-399
               

               
Cow position:
               
chr28:12430569-12430337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 13
               

               
Conread position:
               
159-404
               

               
Cow position:
               
chr28:26151987-26151740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
159-407
               

               
Cow position:
               
chr28:7328859-7328626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
159-407
               

               
Cow position:
               
chr28:11047555-11047293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
159-413
               

               
Cow position:
               
chr28:17637903-17638153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
217, 78
               

               
Conread position:
               
159-413
               

               
Cow position:
               
chr28:19222187-19222434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 27
               

               
Conread position:
               
159-421
               

               
Cow position:
               
chr28:22308607-22308366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
218, 26
               

               
Conread position:
               
160-350
               

               
Cow position:
               
chr28:10478380-10478565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
160-355
               

               
Cow position:
               
chr28:10053370-10053566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
79, 138
               

               
Conread position:
               
160-362
               

               
Cow position:
               
chr28:26340305-26340102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
160-365
               

               
Cow position:
               
chr28:9285411-9285615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
160-375
               

               
Cow position:
               
chr28:2898961-2898748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 128
               

               
Conread position:
               
160-375
               

               
Cow position:
               
chr28:10172451-10172661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
160-379
               

               
Cow position:
               
chr28:16386545-16386758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
72, 128
               

               
Conread position:
               
160-380
               

               
Cow position:
               
chr28:4057944-4057733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
213, 70
               

               
Conread position:
               
160-385
               

               
Cow position:
               
chr28:20963569-20963788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
160-388
               

               
Cow position:
               
chr28:29073790-29074015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
160-389
               

               
Cow position:
               
chr28:19133755-19133523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
160-398
               

               
Cow position:
               
chr28:14151196-14150963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
160-405
               

               
Cow position:
               
chr28:3023953-3024190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
214, 36
               

               
Conread position:
               
160-406
               

               
Cow position:
               
chr28:23231102-23231347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
58, 101
               

               
Conread position:
               
160-407
               

               
Cow position:
               
chr28:6486557-6486315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
128, 47
               

               
Conread position:
               
160-407
               

               
Cow position:
               
chr28:11786755-11786989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
236, 23
               

               
Conread position:
               
160-407
               

               
Cow position:
               
chr28:13693714-13693466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 68
               

               
Conread position:
               
160-407
               

               
Cow position:
               
chr28:25564044-25563795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
71, 57
               

               
Conread position:
               
160-408
               

               
Cow position:
               
chr28:2801198-2800962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
134, 54
               

               
Conread position:
               
160-408
               

               
Cow position:
               
chr28:30293623-30293871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
78, 105
               

               
Conread position:
               
160-408
               

               
Cow position:
               
chr28:30303231-30303477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
160-413
               

               
Cow position:
               
chr28:10888627-10888374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 38
               

               
Conread position:
               
160-413
               

               
Cow position:
               
chr28:23530832-23530575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 158
               

               
Conread position:
               
160-413
               

               
Cow position:
               
chr28:24672227-24671984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
216, 41
               

               
Conread position:
               
160-413
               

               
Cow position:
               
chr28:34442793-34443053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
161-388
               

               
Cow position:
               
chr28:13176722-13176940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
218, 23
               

               
Conread position:
               
161-388
               

               
Cow position:
               
chr28:14218513-14218735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
58, 143
               

               
Conread position:
               
161-389
               

               
Cow position:
               
chr28:23460112-23459876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
161-389
               

               
Cow position:
               
chr28:26533511-26533280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
161-406
               

               
Cow position:
               
chr28:7512625-7512871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 0
               

               
Conread position:
               
161-406
               

               
Cow position:
               
chr28:15272300-15272543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 53
               

               
Conread position:
               
161-408
               

               
Cow position:
               
chr28:21103874-21104128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 129
               

               
Conread position:
               
161-413
               

               
Cow position:
               
chr28:10669537-10669285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
97, 115
               

               
Conread position:
               
161-413
               

               
Cow position:
               
chr28:12758540-12758796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 187
               

               
Conread position:
               
161-413
               

               
Cow position:
               
chr28:29806223-29806486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
77, 218
               

               
Conread position:
               
162-348
               

               
Cow position:
               
chr28:5188443-5188622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
162-375
               

               
Cow position:
               
chr28:5236643-5236847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
162-379
               

               
Cow position:
               
chr28:13241867-13242076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
212, 89
               

               
Conread position:
               
162-407
               

               
Cow position:
               
chr28:6960462-6960213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
214, 0
               

               
Conread position:
               
162-408
               

               
Cow position:
               
chr28:17738113-17738363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 0
               

               
Conread position:
               
162-413
               

               
Cow position:
               
chr28:11759587-11759826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
214, 45
               

               
Conread position:
               
162-413
               

               
Cow position:
               
chr28:18717162-18717414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 26
               

               
Conread position:
               
162-413
               

               
Cow position:
               
chr28:25762994-25762743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
50, 81
               

               
Conread position:
               
163-289
               

               
Cow position:
               
chr28:1632695-1632820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
163-326
               

               
Cow position:
               
chr28:10845077-10844920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
163-393
               

               
Cow position:
               
chr28:34230189-34229963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 9
               

               
Conread position:
               
163-407
               

               
Cow position:
               
chr28:12651567-12651320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
230, 0
               

               
Conread position:
               
163-407
               

               
Cow position:
               
chr28:24604136-24603896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
213, 53
               

               
Conread position:
               
163-422
               

               
Cow position:
               
chr28:2905535-2905289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
164-365
               

               
Cow position:
               
chr28:5658510-5658317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
164-367
               

               
Cow position:
               
chr28:22345977-22345780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
164-375
               

               
Cow position:
               
chr28:21873729-21873525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
164-389
               

               
Cow position:
               
chr28:10745171-10744947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 117
               

               
Conread position:
               
164-389
               

               
Cow position:
               
chr28:12048744-12048961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
212, 64
               

               
Conread position:
               
164-407
               

               
Cow position:
               
chr28:30978232-30978000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
212, 61
               

               
Conread position:
               
164-410
               

               
Cow position:
               
chr28:22332493-22332264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
232, 21
               

               
Conread position:
               
165-367
               

               
Cow position:
               
chr28:4914137-4914341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
165-388
               

               
Cow position:
               
chr28:20265352-20265128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 108
               

               
Conread position:
               
165-390
               

               
Cow position:
               
chr28:9822019-9822236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 39
               

               
Conread position:
               
165-404
               

               
Cow position:
               
chr28:21766933-21767176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
211, 0
               

               
Conread position:
               
165-407
               

               
Cow position:
               
chr28:22132884-22132643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
166-316
               

               
Cow position:
               
chr28:2269625-2269775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
166-316
               

               
Cow position:
               
chr28:31433334-31433184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
166-379
               

               
Cow position:
               
chr28:6334446-6334232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-384
               

               
Cow position:
               
chr28:23772340-23772556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
166-385
               

               
Cow position:
               
chr28:34007985-34008205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-389
               

               
Cow position:
               
chr28:24887340-24887116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-389
               

               
Cow position:
               
chr28:33256551-33256327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-398
               

               
Cow position:
               
chr28:7746305-7746072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-398
               

               
Cow position:
               
chr28:11505057-11505287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
210, 85
               

               
Conread position:
               
166-398
               

               
Cow position:
               
chr28:17130648-17130880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
208, 40
               

               
Conread position:
               
166-398
               

               
Cow position:
               
chr28:18096937-18096706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
166-398
               

               
Cow position:
               
chr28:19065543-19065305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr28:332665-332431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr28:800320-800554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr28:3628292-3628058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr28:3892194-3891960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr28:5335298-5335532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr28:7794196-7794431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr28:9277105-9276872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
210, 76
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr28:12117022-12117257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
194, 0
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr28:17370261-17370028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
210, 223
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr28:19186440-19186206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr28:21893564-21893798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr28:23823108-23823342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr28:25682992-25683226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr28:30561426-30561192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 60
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr28:34731948-34731714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
166-401
               

               
Cow position:
               
chr28:10474164-10473934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
208, 55
               

               
Conread position:
               
166-401
               

               
Cow position:
               
chr28:12961783-12961548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
208, 220
               

               
Conread position:
               
166-401
               

               
Cow position:
               
chr28:15605740-15605504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-402
               

               
Cow position:
               
chr28:5638268-5638031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
97, 101
               

               
Conread position:
               
166-406
               

               
Cow position:
               
chr28:97166-97406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
208, 233
               

               
Conread position:
               
166-406
               

               
Cow position:
               
chr28:32275306-32275066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
208, 236
               

               
Conread position:
               
166-406
               

               
Cow position:
               
chr28:34598537-34598293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:786874-786629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:1172711-1172956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:1213586-1213832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:1262222-1261977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:1575288-1575533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:1957580-1957335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:2089458-2089213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:3187327-3187572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:3881733-3881978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:4311205-4310961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
210, 148
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:4583200-4582955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:5071198-5071443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:5212553-5212308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:5270846-5270601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
167, 188
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:5361053-5361298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:5941704-5941459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:6318946-6319191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
92, 143
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:6650764-6651009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:7060246-7060001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:7715597-7715842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:7970522-7970767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:8066745-8066500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:8111567-8111322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:9268058-9267817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
210, 19
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:9709937-9710182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:10192819-10193063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
208, 10
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:11733163-11733408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:12259891-12260136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:12702084-12701839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:15107363-15107608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:15408479-15408724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:15616767-15616522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:15916311-15916556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:16857450-16857695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:17687444-17687689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:20538812-20538567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
114, 106
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:21491209-21491454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:22318688-22318933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:22577417-22577172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:23686255-23686010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:23721291-23721061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
234, 15
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:23802608-23802371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
210, 97
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:24592727-24592482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:24605853-24606094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
210, 154
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:24993704-24993459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:25105052-25104807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:25411835-25411590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:25892868-25893113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:27939037-27938792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:28356569-28356814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:28472217-28471972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:29035435-29035679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
71, 127
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:29683454-29683209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:30099093-30098848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:30209739-30209983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
208, 103
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:30283816-30284061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:30531781-30532026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:33689726-33689481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:34243924-34243679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:34380017-34379772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
166-408
               

               
Cow position:
               
chr28:2422925-2422680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 44
               

               
Conread position:
               
166-410
               

               
Cow position:
               
chr28:28098693-28098444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
166-414
               

               
Cow position:
               
chr28:7196891-7197143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
166-419
               

               
Cow position:
               
chr28:1810786-1811038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
210, 19
               

               
Conread position:
               
166-437
               

               
Cow position:
               
chr28:34852743-34852467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
165, 173
               

               
Conread position:
               
167-388
               

               
Cow position:
               
chr28:4888795-4889017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
167-392
               

               
Cow position:
               
chr28:8382294-8382068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
209, 0
               

               
Conread position:
               
167-407
               

               
Cow position:
               
chr28:1509095-1508851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
209, 0
               

               
Conread position:
               
168-407
               

               
Cow position:
               
chr28:13371218-13371451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
207, 95
               

               
Conread position:
               
168-413
               

               
Cow position:
               
chr28:22323223-22322976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
208, 111
               

               
Conread position:
               
169-398
               

               
Cow position:
               
chr28:33640781-33640547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
83, 164
               

               
Conread position:
               
169-407
               

               
Cow position:
               
chr28:14675464-14675224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
169-407
               

               
Cow position:
               
chr28:26418788-26419029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
170-316
               

               
Cow position:
               
chr28:23724502-23724644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
170-389
               

               
Cow position:
               
chr28:23793354-23793561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
170-399
               

               
Cow position:
               
chr28:1943082-1943314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
171-413
               

               
Cow position:
               
chr28:22304798-22304568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
207, 14
               

               
Conread position:
               
172-407
               

               
Cow position:
               
chr28:16250094-16250327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
172-407
               

               
Cow position:
               
chr28:29824396-29824157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
177, 159
               

               
Conread position:
               
173-389
               

               
Cow position:
               
chr28:2340485-2340271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 65
               

               
Conread position:
               
173-404
               

               
Cow position:
               
chr28:14657652-14657415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
49, 106
               

               
Conread position:
               
174-375
               

               
Cow position:
               
chr28:16354656-16354867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
5, 17
               

               
Conread position:
               
174-390
               

               
Cow position:
               
chr28:3408258-3408480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
38, 70
               

               
Conread position:
               
174-414
               

               
Cow position:
               
chr28:3246280-3246048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
202, 40
               

               
Conread position:
               
175-399
               

               
Cow position:
               
chr28:22040075-22040300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
202, 0
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr28:34626986-34626753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
201, 16
               

               
Conread position:
               
175-406
               

               
Cow position:
               
chr28:15043914-15044138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
196, 62
               

               
Conread position:
               
175-407
               

               
Cow position:
               
chr28:4188477-4188246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
164, 46
               

               
Conread position:
               
175-407
               

               
Cow position:
               
chr28:4536404-4536187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 32
               

               
Conread position:
               
175-407
               

               
Cow position:
               
chr28:13889897-13889661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
175-407
               

               
Cow position:
               
chr28:19515440-19515675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
201, 53
               

               
Conread position:
               
175-407
               

               
Cow position:
               
chr28:23212033-23212268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
135, 206
               

               
Conread position:
               
175-410
               

               
Cow position:
               
chr28:22083545-22083784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
175-413
               

               
Cow position:
               
chr28:5771314-5771077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
185, 53
               

               
Conread position:
               
176-406
               

               
Cow position:
               
chr28:7723444-7723672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
200, 0
               

               
Conread position:
               
176-406
               

               
Cow position:
               
chr28:16686974-16686752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
210, 37
               

               
Conread position:
               
177-407
               

               
Cow position:
               
chr28:12458107-12457873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
177-407
               

               
Cow position:
               
chr28:28798345-28798576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
199, 97
               

               
Conread position:
               
179-399
               

               
Cow position:
               
chr28:30803550-30803331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
198, 19
               

               
Conread position:
               
179-407
               

               
Cow position:
               
chr28:22253996-22254229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
183-407
               

               
Cow position:
               
chr28:16211151-16211380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
183-407
               

               
Cow position:
               
chr28:16441323-16441107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
193, 96
               

               
Conread position:
               
184-408
               

               
Cow position:
               
chr28:21129187-21129407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
170, 53
               

               
Conread position:
               
185-283
               

               
Cow position:
               
chr28:19015346-19015444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
185-394
               

               
Cow position:
               
chr28:2943-3151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
189, 94
               

               
Conread position:
               
185-407
               

               
Cow position:
               
chr28:3751252-3751036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
191, 10
               

               
Conread position:
               
186-313
               

               
Cow position:
               
chr28:3000653-3000780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
186-328
               

               
Cow position:
               
chr28:11829001-11829145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
103, 51
               

               
Conread position:
               
186-358
               

               
Cow position:
               
chr28:7980478-7980649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
186-375
               

               
Cow position:
               
chr28:10529547-10529730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
44, 78
               

               
Conread position:
               
186-379
               

               
Cow position:
               
chr28:4938768-4938586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
191, 18
               

               
Conread position:
               
186-381
               

               
Cow position:
               
chr28:16370139-16370328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
190, 42
               

               
Conread position:
               
186-384
               

               
Cow position:
               
chr28:22485185-22484991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
48, 95
               

               
Conread position:
               
186-384
               

               
Cow position:
               
chr28:31841397-31841594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
10, 52
               

               
Conread position:
               
186-398
               

               
Cow position:
               
chr28:17316810-17316589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
41, 178
               

               
Conread position:
               
186-399
               

               
Cow position:
               
chr28:9183065-9182851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
186-402
               

               
Cow position:
               
chr28:5805454-5805250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
191, 42
               

               
Conread position:
               
186-406
               

               
Cow position:
               
chr28:10456588-10456800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
185, 23
               

               
Conread position:
               
186-406
               

               
Cow position:
               
chr28:22208585-22208809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
186-407
               

               
Cow position:
               
chr28:481513-481738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
186-407
               

               
Cow position:
               
chr28:5311153-5311378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
186-407
               

               
Cow position:
               
chr28:10868214-10868439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
186-407
               

               
Cow position:
               
chr28:13322806-13323031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
186-407
               

               
Cow position:
               
chr28:16598346-16598119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
186-407
               

               
Cow position:
               
chr28:16919223-16919444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
174, 42
               

               
Conread position:
               
186-407
               

               
Cow position:
               
chr28:22371740-22371959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
191, 51
               

               
Conread position:
               
186-407
               

               
Cow position:
               
chr28:28214184-28213960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
190, 42
               

               
Conread position:
               
186-410
               

               
Cow position:
               
chr28:14234910-14234691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
190, 93
               

               
Conread position:
               
186-413
               

               
Cow position:
               
chr28:22279260-22279470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
187-397
               

               
Cow position:
               
chr28:25056906-25056701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
187-398
               

               
Cow position:
               
chr28:20759984-20760195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
189, 50
               

               
Conread position:
               
187-407
               

               
Cow position:
               
chr28:8963464-8963244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
189, 208
               

               
Conread position:
               
190-398
               

               
Cow position:
               
chr28:18591206-18590999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
168, 47
               

               
Conread position:
               
193-375
               

               
Cow position:
               
chr28:13936346-13936169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
193-383
               

               
Cow position:
               
chr28:32813064-32813255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
193-386
               

               
Cow position:
               
chr28:1099711-1099901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
193-388
               

               
Cow position:
               
chr28:29434495-29434688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
183, 42
               

               
Conread position:
               
193-407
               

               
Cow position:
               
chr28:3161140-3161360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
135, 37
               

               
Conread position:
               
194-407
               

               
Cow position:
               
chr28:1885161-1884943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
194-407
               

               
Cow position:
               
chr28:27503663-27503881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 86
               

               
Conread position:
               
194-435
               

               
Cow position:
               
chr28:26723605-26723366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
183, 65
               

               
Conread position:
               
195-407
               

               
Cow position:
               
chr28:28341227-28341014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 174
               

               
Conread position:
               
197-413
               

               
Cow position:
               
chr28:16346602-16346805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
198-407
               

               
Cow position:
               
chr28:16388556-16388363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
179, 30
               

               
Conread position:
               
198-413
               

               
Cow position:
               
chr28:31142041-31142253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
198, 62
               

               
Conread position:
               
200-375
               

               
Cow position:
               
chr28:24646467-24646293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
200-407
               

               
Cow position:
               
chr28:8372397-8372188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
176, 37
               

               
Conread position:
               
200-407
               

               
Cow position:
               
chr28:16450780-16450974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
176, 63
               

               
Conread position:
               
201-407
               

               
Cow position:
               
chr28:28792392-28792190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
174, 15
               

               
Conread position:
               
202-408
               

               
Cow position:
               
chr28:3480193-3479981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
207-407
               

               
Cow position:
               
chr28:7013669-7013871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
173, 37
               

               
Conread position:
               
209-398
               

               
Cow position:
               
chr28:19564678-19564864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
211-406
               

               
Cow position:
               
chr28:16925298-16925493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
165, 67
               

               
Conread position:
               
214-413
               

               
Cow position:
               
chr28:3740754-3740563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
160, 23
               

               
Conread position:
               
214-414
               

               
Cow position:
               
chr28:10296108-10295902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
216-388
               

               
Cow position:
               
chr28:5366221-5366394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
136, 21
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr28:5371000-5371197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
137, 58
               

               
Conread position:
               
217-398
               

               
Cow position:
               
chr28:15063429-15063610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
221-353
               

               
Cow position:
               
chr28:8628873-8629002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
221-407
               

               
Cow position:
               
chr28:3463060-3462874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
9, 123
               

               
Conread position:
               
221-413
               

               
Cow position:
               
chr28:16879372-16879554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
153, 16
               

               
Conread position:
               
222-376
               

               
Cow position:
               
chr28:22583535-22583384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 126
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr28:7372351-7372534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
153, 14
               

               
Conread position:
               
224-398
               

               
Cow position:
               
chr28:8740503-8740330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
94, 47
               

               
Conread position:
               
225-406
               

               
Cow position:
               
chr28:4058627-4058445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
225-407
               

               
Cow position:
               
chr28:2615666-2615852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
225-407
               

               
Cow position:
               
chr28:10871247-10871061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
228-409
               

               
Cow position:
               
chr28:8911319-8911504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
230-375
               

               
Cow position:
               
chr28:9740367-9740224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
230-387
               

               
Cow position:
               
chr28:2618613-2618456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
147, 119
               

               
Conread position:
               
230-398
               

               
Cow position:
               
chr28:29952953-29953116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
230-405
               

               
Cow position:
               
chr28:4957353-4957529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 33
               

               
Conread position:
               
230-405
               

               
Cow position:
               
chr28:13719413-13719239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
23, 135
               

               
Conread position:
               
231-381
               

               
Cow position:
               
chr28:16475886-16475742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
84, 48
               

               
Conread position:
               
231-385
               

               
Cow position:
               
chr28:7389220-7389068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
231-386
               

               
Cow position:
               
chr28:20036649-20036489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
231-388
               

               
Cow position:
               
chr28:28590631-28590478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
145, 47
               

               
Conread position:
               
231-398
               

               
Cow position:
               
chr28:11356026-11356195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
231-398
               

               
Cow position:
               
chr28:23111831-23111663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
231-398
               

               
Cow position:
               
chr28:25334917-25334749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
231-402
               

               
Cow position:
               
chr28:2222216-2222391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
231-406
               

               
Cow position:
               
chr28:16350154-16350322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
231-413
               

               
Cow position:
               
chr28:3011533-3011709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
165, 55
               

               
Conread position:
               
231-414
               

               
Cow position:
               
chr28:22351388-22351201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
127, 18
               

               
Conread position:
               
232-370
               

               
Cow position:
               
chr28:25498608-25498746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
232-397
               

               
Cow position:
               
chr28:29392898-29392732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
232-401
               

               
Cow position:
               
chr28:9265242-9265071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
233-407
               

               
Cow position:
               
chr28:12938891-12938719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
143, 45
               

               
Conread position:
               
233-407
               

               
Cow position:
               
chr28:17762553-17762375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
234-407
               

               
Cow position:
               
chr28:26595638-26595465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
119, 164
               

               
Conread position:
               
235-379
               

               
Cow position:
               
chr28:12933873-12934014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
140, 55
               

               
Conread position:
               
236-414
               

               
Cow position:
               
chr28:7882698-7882514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
237-398
               

               
Cow position:
               
chr28:7485289-7485449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 33
               

               
Conread position:
               
237-407
               

               
Cow position:
               
chr28:31223706-31223877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
139, 36
               

               
Conread position:
               
240-407
               

               
Cow position:
               
chr28:14742689-14742517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
240-410
               

               
Cow position:
               
chr28:3646592-3646423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
136, 85
               

               
Conread position:
               
241-408
               

               
Cow position:
               
chr28:8103505-8103673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
135, 102
               

               
Conread position:
               
246-407
               

               
Cow position:
               
chr28:5837991-5837829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
246-407
               

               
Cow position:
               
chr28:10977744-10977581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 40
               

               
Conread position:
               
247-413
               

               
Cow position:
               
chr28:1315914-1316079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
149, 30
               

               
Conread position:
               
249-374
               

               
Cow position:
               
chr28:23253922-23254045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
256-407
               

               
Cow position:
               
chr28:26452736-26452888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
120, 91
               

               
Conread position:
               
260-397
               

               
Cow position:
               
chr28:1537574-1537434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
263-407
               

               
Cow position:
               
chr28:9647165-9647309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
264-398
               

               
Cow position:
               
chr28:25128119-25128254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
265-398
               

               
Cow position:
               
chr28:16003929-16003795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
266-407
               

               
Cow position:
               
chr28:26627623-26627760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
272-407
               

               
Cow position:
               
chr28:3427008-3427144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
104, 0
               
Show alignments to all cow chromosomes.