Cow genome map


           Conread name:
           Ss1.1-rnbm29b_l4.5
        

               Conread position:
               115-407
               

               Cow position:
               chr3:16004010-16004298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               61, 123
               

               Conread position:
               132-407
               

               Cow position:
               chr3:6853542-6853815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               215
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               14, 136
               

               Conread position:
               135-413
               

               Cow position:
               chr3:61361363-61361099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               99, 26
               

               Conread position:
               136-388
               

               Cow position:
               chr3:18458702-18458944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               138-325
               

               Cow position:
               chr3:26960633-26960821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               138-375
               

               Cow position:
               chr3:26065959-26065725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               138-388
               

               Cow position:
               chr3:17936885-17937129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               16, 36
               

               Conread position:
               138-388
               

               Cow position:
               chr3:73417478-73417232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 71
               

               Conread position:
               138-398
               

               Cow position:
               chr3:49327896-49327646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               138-407
               

               Cow position:
               chr3:8159910-8159643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               238, 133
               

               Conread position:
               138-407
               

               Cow position:
               chr3:34016701-34016430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               236, 11
               

               Conread position:
               138-408
               

               Cow position:
               chr3:56582793-56582533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               238, 66
               

               Conread position:
               138-413
               

               Cow position:
               chr3:18459566-18459838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 23
               

               Conread position:
               139-270
               

               Cow position:
               chr3:55819704-55819572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 9
               

               Conread position:
               139-275
               

               Cow position:
               chr3:45743693-45743556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               96, 111
               

               Conread position:
               139-276
               

               Cow position:
               chr3:26982021-26981883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 30
               

               Conread position:
               139-281
               

               Cow position:
               chr3:75687484-75687625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               139-293
               

               Cow position:
               chr3:65381103-65380955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               139-301
               

               Cow position:
               chr3:7940599-7940758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               7, 70
               

               Conread position:
               139-313
               

               Cow position:
               chr3:3062518-3062348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               91, 119
               

               Conread position:
               139-314
               

               Cow position:
               chr3:70609579-70609407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               139-315
               

               Cow position:
               chr3:4319664-4319494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               139-324
               

               Cow position:
               chr3:74134654-74134480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               139-347
               

               Cow position:
               chr3:55947537-55947327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               139-347
               

               Cow position:
               chr3:55991911-55992120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 114
               

               Conread position:
               139-348
               

               Cow position:
               chr3:15752682-15752877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               139-356
               

               Cow position:
               chr3:56476635-56476425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               23, 56
               

               Conread position:
               139-358
               

               Cow position:
               chr3:45307889-45307675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               20, 87
               

               Conread position:
               139-361
               

               Cow position:
               chr3:75080721-75080504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               139-364
               

               Cow position:
               chr3:55971182-55970960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               24, 10
               

               Conread position:
               139-366
               

               Cow position:
               chr3:28938951-28939182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 35
               

               Conread position:
               139-371
               

               Cow position:
               chr3:70899846-70899628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               139-372
               

               Cow position:
               chr3:10347307-10347081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               216, 9
               

               Conread position:
               139-373
               

               Cow position:
               chr3:54946084-54945851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               11, 99
               

               Conread position:
               139-373
               

               Cow position:
               chr3:75045923-75046144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               139-374
               

               Cow position:
               chr3:32585103-32584883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               139-375
               

               Cow position:
               chr3:53046706-53046933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               13, 45
               

               Conread position:
               139-375
               

               Cow position:
               chr3:68627731-68627951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 64
               

               Conread position:
               139-376
               

               Cow position:
               chr3:6873293-6873522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               139-379
               

               Cow position:
               chr3:81277745-81277985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               139-380
               

               Cow position:
               chr3:81473967-81473722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               12, 122
               

               Conread position:
               139-381
               

               Cow position:
               chr3:5416273-5416514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               107, 9
               

               Conread position:
               139-381
               

               Cow position:
               chr3:39171526-39171767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 101
               

               Conread position:
               139-382
               

               Cow position:
               chr3:8457610-8457373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               139-382
               

               Cow position:
               chr3:68583051-68583286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               237, 9
               

               Conread position:
               139-384
               

               Cow position:
               chr3:74409438-74409211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 90
               

               Conread position:
               139-385
               

               Cow position:
               chr3:4050149-4049926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               97, 123
               

               Conread position:
               139-385
               

               Cow position:
               chr3:66292223-66292465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               139-385
               

               Cow position:
               chr3:73443135-73443374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 29
               

               Conread position:
               139-386
               

               Cow position:
               chr3:55124326-55124566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               15, 66
               

               Conread position:
               139-386
               

               Cow position:
               chr3:67704499-67704252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 100
               

               Conread position:
               139-387
               

               Cow position:
               chr3:83815834-83816082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 104
               

               Conread position:
               139-388
               

               Cow position:
               chr3:5097160-5096913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 10
               

               Conread position:
               139-388
               

               Cow position:
               chr3:13329820-13330062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 101
               

               Conread position:
               139-388
               

               Cow position:
               chr3:17895798-17895564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 45
               

               Conread position:
               139-388
               

               Cow position:
               chr3:23471509-23471758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 59
               

               Conread position:
               139-388
               

               Cow position:
               chr3:45647633-45647387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               12, 58
               

               Conread position:
               139-388
               

               Cow position:
               chr3:78894372-78894604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               100, 13
               

               Conread position:
               139-389
               

               Cow position:
               chr3:8393893-8393648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 92
               

               Conread position:
               139-389
               

               Cow position:
               chr3:55085218-55085475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               8, 157
               

               Conread position:
               139-389
               

               Cow position:
               chr3:65413325-65413566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 89
               

               Conread position:
               139-389
               

               Cow position:
               chr3:75711264-75711028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               237, 17
               

               Conread position:
               139-390
               

               Cow position:
               chr3:26553758-26554000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               12, 138
               

               Conread position:
               139-394
               

               Cow position:
               chr3:12287183-12286939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               237, 14
               

               Conread position:
               139-394
               

               Cow position:
               chr3:52863229-52863477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               139-395
               

               Cow position:
               chr3:8393303-8393049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 9
               

               Conread position:
               139-398
               

               Cow position:
               chr3:2396826-2397083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 9
               

               Conread position:
               139-398
               

               Cow position:
               chr3:2903343-2903598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               35, 9
               

               Conread position:
               139-398
               

               Cow position:
               chr3:8147714-8147963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               237, 10
               

               Conread position:
               139-398
               

               Cow position:
               chr3:11728120-11728382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               139-398
               

               Cow position:
               chr3:17952611-17952356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 121
               

               Conread position:
               139-398
               

               Cow position:
               chr3:26920862-26920595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 54
               

               Conread position:
               139-398
               

               Cow position:
               chr3:49650341-49650080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 217
               

               Conread position:
               139-398
               

               Cow position:
               chr3:55970460-55970207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 24
               

               Conread position:
               139-398
               

               Cow position:
               chr3:67161897-67161632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 226
               

               Conread position:
               139-398
               

               Cow position:
               chr3:71497185-71497446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 67
               

               Conread position:
               139-398
               

               Cow position:
               chr3:82461133-82460883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               218, 123
               

               Conread position:
               139-399
               

               Cow position:
               chr3:24304962-24305206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               99, 118
               

               Conread position:
               139-399
               

               Cow position:
               chr3:48296665-48296410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               16, 91
               

               Conread position:
               139-401
               

               Cow position:
               chr3:66708116-66708378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               71, 91
               

               Conread position:
               139-407
               

               Cow position:
               chr3:210272-210010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 59
               

               Conread position:
               139-407
               

               Cow position:
               chr3:4134860-4135130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               235, 10
               

               Conread position:
               139-407
               

               Cow position:
               chr3:5475663-5475390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               139-407
               

               Cow position:
               chr3:10958287-10958537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               13, 99
               

               Conread position:
               139-407
               

               Cow position:
               chr3:29807419-29807151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 14
               

               Conread position:
               139-407
               

               Cow position:
               chr3:42178113-42177848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 114
               

               Conread position:
               139-407
               

               Cow position:
               chr3:48241572-48241309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 91
               

               Conread position:
               139-407
               

               Cow position:
               chr3:52017724-52017448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 134
               

               Conread position:
               139-407
               

               Cow position:
               chr3:53113128-53112856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 98
               

               Conread position:
               139-407
               

               Cow position:
               chr3:53790582-53790856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               66, 78
               

               Conread position:
               139-407
               

               Cow position:
               chr3:55272092-55272352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               255, 98
               

               Conread position:
               139-407
               

               Cow position:
               chr3:59000798-59001057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 34
               

               Conread position:
               139-407
               

               Cow position:
               chr3:59268046-59267773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               7, 57
               

               Conread position:
               139-407
               

               Cow position:
               chr3:65800545-65800287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               12, 30
               

               Conread position:
               139-407
               

               Cow position:
               chr3:74601067-74600808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               19, 99
               

               Conread position:
               139-407
               

               Cow position:
               chr3:80081869-80082129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               238, 10
               

               Conread position:
               139-408
               

               Cow position:
               chr3:30180038-30179771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               139-408
               

               Cow position:
               chr3:64716978-64716710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               255, 22
               

               Conread position:
               139-409
               

               Cow position:
               chr3:46350626-46350338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               215
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               139-410
               

               Cow position:
               chr3:54960143-54959879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 74
               

               Conread position:
               139-413
               

               Cow position:
               chr3:20802667-20802946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               139-413
               

               Cow position:
               chr3:49382900-49382634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               98, 9
               

               Conread position:
               139-413
               

               Cow position:
               chr3:54903529-54903255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               95, 14
               

               Conread position:
               139-413
               

               Cow position:
               chr3:55189801-55190065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               6, 69
               

               Conread position:
               139-413
               

               Cow position:
               chr3:59451544-59451277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               91, 54
               

               Conread position:
               139-413
               

               Cow position:
               chr3:60597496-60597235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 74
               

               Conread position:
               140-311
               

               Cow position:
               chr3:36375589-36375760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               77, 8
               

               Conread position:
               140-354
               

               Cow position:
               chr3:26970780-26970570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               140-356
               

               Cow position:
               chr3:22820524-22820312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               9, 100
               

               Conread position:
               140-370
               

               Cow position:
               chr3:84000567-84000341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               140-376
               

               Cow position:
               chr3:13507420-13507189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               19, 60
               

               Conread position:
               140-381
               

               Cow position:
               chr3:60892576-60892350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               236, 41
               

               Conread position:
               140-386
               

               Cow position:
               chr3:23111549-23111792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               17, 76
               

               Conread position:
               140-386
               

               Cow position:
               chr3:54770963-54770718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               131, 33
               

               Conread position:
               140-386
               

               Cow position:
               chr3:64280979-64281224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 13
               

               Conread position:
               140-390
               

               Cow position:
               chr3:70467870-70468095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               10, 62
               

               Conread position:
               140-391
               

               Cow position:
               chr3:27274481-27274247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               236, 13
               

               Conread position:
               140-398
               

               Cow position:
               chr3:14725256-14724997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               234, 0
               

               Conread position:
               140-398
               

               Cow position:
               chr3:15684971-15685210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               171, 42
               

               Conread position:
               140-398
               

               Cow position:
               chr3:49230967-49230715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               119, 20
               

               Conread position:
               140-398
               

               Cow position:
               chr3:77496779-77496517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 103
               

               Conread position:
               140-399
               

               Cow position:
               chr3:5394012-5394271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               197, 13
               

               Conread position:
               140-399
               

               Cow position:
               chr3:13353314-13353059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               236, 9
               

               Conread position:
               140-401
               

               Cow position:
               chr3:39328350-39328110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               24, 121
               

               Conread position:
               140-402
               

               Cow position:
               chr3:5419909-5420170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               94, 44
               

               Conread position:
               140-402
               

               Cow position:
               chr3:56161262-56160997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               83, 46
               

               Conread position:
               140-406
               

               Cow position:
               chr3:2015726-2015464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               7, 60
               

               Conread position:
               140-407
               

               Cow position:
               chr3:2075907-2075637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               234, 13
               

               Conread position:
               140-407
               

               Cow position:
               chr3:5456290-5456557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               237, 13
               

               Conread position:
               140-407
               

               Cow position:
               chr3:19708150-19708409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 138
               

               Conread position:
               140-407
               

               Cow position:
               chr3:35852521-35852781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               236, 45
               

               Conread position:
               140-407
               

               Cow position:
               chr3:42452466-42452198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               213, 25
               

               Conread position:
               140-413
               

               Cow position:
               chr3:31903160-31903426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               236, 67
               

               Conread position:
               140-413
               

               Cow position:
               chr3:59101783-59101517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               237, 114
               

               Conread position:
               140-414
               

               Cow position:
               chr3:2630749-2630481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               11, 68
               

               Conread position:
               141-277
               

               Cow position:
               chr3:79092438-79092577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               141-288
               

               Cow position:
               chr3:57274016-57273873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               141-295
               

               Cow position:
               chr3:67698231-67698079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               141-297
               

               Cow position:
               chr3:53094981-53095138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               89, 15
               

               Conread position:
               141-309
               

               Cow position:
               chr3:83727296-83727461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               93, 15
               

               Conread position:
               141-317
               

               Cow position:
               chr3:62790059-62790238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               87, 36
               

               Conread position:
               141-345
               

               Cow position:
               chr3:55835871-55836075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               35, 98
               

               Conread position:
               141-357
               

               Cow position:
               chr3:28692479-28692688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               141-357
               

               Cow position:
               chr3:71238109-71237899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               141-361
               

               Cow position:
               chr3:74621039-74621259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               93, 20
               

               Conread position:
               141-367
               

               Cow position:
               chr3:60933367-60933147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               93, 50
               

               Conread position:
               141-367
               

               Cow position:
               chr3:74611518-74611294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               13, 53
               

               Conread position:
               141-375
               

               Cow position:
               chr3:57624418-57624187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               14, 73
               

               Conread position:
               141-375
               

               Cow position:
               chr3:74500194-74499948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               141-386
               

               Cow position:
               chr3:39969912-39970160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               19, 99
               

               Conread position:
               141-397
               

               Cow position:
               chr3:1830622-1830864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               234, 61
               

               Conread position:
               141-398
               

               Cow position:
               chr3:48269814-48269563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 57
               

               Conread position:
               141-398
               

               Cow position:
               chr3:61171553-61171802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               121, 45
               

               Conread position:
               141-398
               

               Cow position:
               chr3:81371599-81371356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               9, 75
               

               Conread position:
               141-399
               

               Cow position:
               chr3:41018184-41018443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               233, 0
               

               Conread position:
               141-399
               

               Cow position:
               chr3:53588432-53588693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               13, 99
               

               Conread position:
               141-401
               

               Cow position:
               chr3:62292170-62292418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               235, 61
               

               Conread position:
               141-407
               

               Cow position:
               chr3:15417594-15417323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               141-407
               

               Cow position:
               chr3:16656536-16656780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               219, 49
               

               Conread position:
               141-407
               

               Cow position:
               chr3:37637020-37637288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               233, 52
               

               Conread position:
               141-407
               

               Cow position:
               chr3:46160893-46161157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               93, 40
               

               Conread position:
               141-407
               

               Cow position:
               chr3:54572812-54573082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               233, 0
               

               Conread position:
               141-408
               

               Cow position:
               chr3:7858321-7858039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               141-408
               

               Cow position:
               chr3:61539756-61539484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               141-413
               

               Cow position:
               chr3:2036254-2035980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               19, 137
               

               Conread position:
               141-413
               

               Cow position:
               chr3:4457121-4457394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 20
               

               Conread position:
               141-413
               

               Cow position:
               chr3:31225391-31225132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               233, 66
               

               Conread position:
               141-420
               

               Cow position:
               chr3:25690743-25690464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 20
               

               Conread position:
               142-304
               

               Cow position:
               chr3:57760451-57760293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               142-326
               

               Cow position:
               chr3:74119488-74119673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               142-328
               

               Cow position:
               chr3:76015242-76015070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 31
               

               Conread position:
               142-334
               

               Cow position:
               chr3:39661504-39661685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               92, 38
               

               Conread position:
               142-335
               

               Cow position:
               chr3:83201571-83201764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               142-349
               

               Cow position:
               chr3:77006444-77006254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               203, 31
               

               Conread position:
               142-357
               

               Cow position:
               chr3:4087212-4087424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               173
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               96, 130
               

               Conread position:
               142-379
               

               Cow position:
               chr3:77365346-77365575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 109
               

               Conread position:
               142-388
               

               Cow position:
               chr3:27544381-27544619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               232, 75
               

               Conread position:
               142-389
               

               Cow position:
               chr3:73759563-73759810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               28, 87
               

               Conread position:
               142-398
               

               Cow position:
               chr3:69849554-69849802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               35, 95
               

               Conread position:
               142-406
               

               Cow position:
               chr3:50614588-50614334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               142-407
               

               Cow position:
               chr3:33698680-33698413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 19
               

               Conread position:
               142-407
               

               Cow position:
               chr3:65058653-65058390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 59
               

               Conread position:
               142-408
               

               Cow position:
               chr3:11987282-11987018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               18, 123
               

               Conread position:
               142-413
               

               Cow position:
               chr3:2025137-2024866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 46
               

               Conread position:
               142-413
               

               Cow position:
               chr3:80053587-80053852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               96, 136
               

               Conread position:
               143-313
               

               Cow position:
               chr3:25060029-25059859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-335
               

               Cow position:
               chr3:80922528-80922332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 145
               

               Conread position:
               143-367
               

               Cow position:
               chr3:51578370-51578589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               143-385
               

               Cow position:
               chr3:73467573-73467332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 20
               

               Conread position:
               143-388
               

               Cow position:
               chr3:17957415-17957177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               191
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               91, 18
               

               Conread position:
               143-390
               

               Cow position:
               chr3:9663220-9663479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               8, 54
               

               Conread position:
               143-398
               

               Cow position:
               chr3:2216316-2216060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 218
               

               Conread position:
               143-398
               

               Cow position:
               chr3:59610771-59611016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               81, 30
               

               Conread position:
               143-399
               

               Cow position:
               chr3:41367035-41367284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 86
               

               Conread position:
               143-405
               

               Cow position:
               chr3:53270780-53270519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 135
               

               Conread position:
               143-407
               

               Cow position:
               chr3:3032356-3032089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               107, 183
               

               Conread position:
               143-407
               

               Cow position:
               chr3:21155560-21155293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               231, 10
               

               Conread position:
               143-407
               

               Cow position:
               chr3:71231350-71231094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               12, 115
               

               Conread position:
               143-413
               

               Cow position:
               chr3:29891461-29891735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               120, 178
               

               Conread position:
               143-413
               

               Cow position:
               chr3:30358683-30358952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               17, 132
               

               Conread position:
               143-413
               

               Cow position:
               chr3:53592744-53593017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 13
               

               Conread position:
               143-413
               

               Cow position:
               chr3:67929311-67929584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 18
               

               Conread position:
               144-284
               

               Cow position:
               chr3:34669777-34669917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               144-345
               

               Cow position:
               chr3:11711911-11711707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               86, 180
               

               Conread position:
               144-358
               

               Cow position:
               chr3:16333750-16333547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               144-373
               

               Cow position:
               chr3:51543038-51542811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               144-375
               

               Cow position:
               chr3:38864065-38863837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               173, 93
               

               Conread position:
               144-384
               

               Cow position:
               chr3:71161747-71161508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               8, 134
               

               Conread position:
               144-388
               

               Cow position:
               chr3:56637620-56637376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 72
               

               Conread position:
               144-396
               

               Cow position:
               chr3:57553901-57554145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 84
               

               Conread position:
               144-398
               

               Cow position:
               chr3:26219101-26219361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               144-398
               

               Cow position:
               chr3:31771636-31771400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               232, 45
               

               Conread position:
               144-398
               

               Cow position:
               chr3:50768632-50768379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 84
               

               Conread position:
               144-398
               

               Cow position:
               chr3:58206502-58206751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               216, 81
               

               Conread position:
               144-405
               

               Cow position:
               chr3:23476952-23476691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               80, 70
               

               Conread position:
               144-407
               

               Cow position:
               chr3:4864562-4864829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               232, 0
               

               Conread position:
               144-407
               

               Cow position:
               chr3:14626206-14626462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 136
               

               Conread position:
               144-407
               

               Cow position:
               chr3:24939275-24939535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               232, 123
               

               Conread position:
               144-407
               

               Cow position:
               chr3:26904060-26903805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 41
               

               Conread position:
               144-408
               

               Cow position:
               chr3:49455188-49454919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 129
               

               Conread position:
               145-315
               

               Cow position:
               chr3:15859720-15859887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               145-347
               

               Cow position:
               chr3:44932460-44932260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               145-376
               

               Cow position:
               chr3:70334746-70334980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               85, 124
               

               Conread position:
               145-398
               

               Cow position:
               chr3:83491035-83490776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               145-406
               

               Cow position:
               chr3:14465764-14466015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               201
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               231, 51
               

               Conread position:
               145-407
               

               Cow position:
               chr3:15161118-15161391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               145-407
               

               Cow position:
               chr3:45881852-45881597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 59
               

               Conread position:
               146-370
               

               Cow position:
               chr3:69778953-69779175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               146-407
               

               Cow position:
               chr3:79292777-79292523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 50
               

               Conread position:
               147-315
               

               Cow position:
               chr3:75535055-75534896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               147-406
               

               Cow position:
               chr3:68586967-68586730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               227, 90
               

               Conread position:
               148-294
               

               Cow position:
               chr3:70631958-70631819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               148-332
               

               Cow position:
               chr3:71135738-71135555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               71, 8
               

               Conread position:
               148-380
               

               Cow position:
               chr3:14801687-14801469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 37
               

               Conread position:
               148-382
               

               Cow position:
               chr3:20155776-20155546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               228, 131
               

               Conread position:
               148-383
               

               Cow position:
               chr3:19789169-19789404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               101, 52
               

               Conread position:
               148-385
               

               Cow position:
               chr3:30418075-30417842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               228, 111
               

               Conread position:
               148-386
               

               Cow position:
               chr3:34316012-34316252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               86, 68
               

               Conread position:
               148-398
               

               Cow position:
               chr3:44534814-44535060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               76, 141
               

               Conread position:
               148-407
               

               Cow position:
               chr3:35283144-35283397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               12, 93
               

               Conread position:
               148-407
               

               Cow position:
               chr3:59515049-59514802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               228, 37
               

               Conread position:
               149-326
               

               Cow position:
               chr3:22900046-22900220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               90, 49
               

               Conread position:
               149-348
               

               Cow position:
               chr3:52652137-52652323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               149-355
               

               Cow position:
               chr3:2680462-2680255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               149-356
               

               Cow position:
               chr3:74088225-74088431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               149-357
               

               Cow position:
               chr3:8604069-8604272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               149-364
               

               Cow position:
               chr3:67543923-67544139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               149-375
               

               Cow position:
               chr3:23478171-23477959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               197, 35
               

               Conread position:
               149-375
               

               Cow position:
               chr3:49482762-49482980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               86, 125
               

               Conread position:
               149-388
               

               Cow position:
               chr3:58540582-58540820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 74
               

               Conread position:
               149-389
               

               Cow position:
               chr3:9641510-9641273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 58
               

               Conread position:
               149-389
               

               Cow position:
               chr3:15228876-15229110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               86, 35
               

               Conread position:
               149-389
               

               Cow position:
               chr3:31419646-31419413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               149-389
               

               Cow position:
               chr3:56059752-56059516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 139
               

               Conread position:
               149-389
               

               Cow position:
               chr3:73956971-73956735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               137, 44
               

               Conread position:
               149-389
               

               Cow position:
               chr3:77271329-77271559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               205, 80
               

               Conread position:
               149-398
               

               Cow position:
               chr3:28675935-28675689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               12, 82
               

               Conread position:
               149-398
               

               Cow position:
               chr3:49218369-49218607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 88
               

               Conread position:
               149-398
               

               Cow position:
               chr3:65969106-65968855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 207
               

               Conread position:
               149-398
               

               Cow position:
               chr3:83934455-83934214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               211, 50
               

               Conread position:
               149-403
               

               Cow position:
               chr3:62826674-62826928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 89
               

               Conread position:
               149-405
               

               Cow position:
               chr3:53150272-53150016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 12
               

               Conread position:
               149-406
               

               Cow position:
               chr3:48363021-48362772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               227, 33
               

               Conread position:
               149-407
               

               Cow position:
               chr3:4223258-4223007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               198, 71
               

               Conread position:
               149-407
               

               Cow position:
               chr3:5100822-5101072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 78
               

               Conread position:
               149-407
               

               Cow position:
               chr3:20129889-20129629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               149-407
               

               Cow position:
               chr3:20663587-20663850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               149-407
               

               Cow position:
               chr3:22021030-22021285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               224, 58
               

               Conread position:
               149-407
               

               Cow position:
               chr3:30531904-30531642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               227, 0
               

               Conread position:
               149-407
               

               Cow position:
               chr3:61840221-61839979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               227, 81
               

               Conread position:
               149-407
               

               Cow position:
               chr3:80072072-80071805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 89
               

               Conread position:
               149-407
               

               Cow position:
               chr3:82657140-82657397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               70, 84
               

               Conread position:
               149-408
               

               Cow position:
               chr3:24548903-24549145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               227, 15
               

               Conread position:
               149-413
               

               Cow position:
               chr3:8717196-8716929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               149-413
               

               Cow position:
               chr3:31298209-31298475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 7
               

               Conread position:
               149-414
               

               Cow position:
               chr3:33632947-33633205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               228, 55
               

               Conread position:
               149-414
               

               Cow position:
               chr3:72168772-72169039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               228, 109
               

               Conread position:
               150-316
               

               Cow position:
               chr3:49627416-49627580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               150-344
               

               Cow position:
               chr3:30055503-30055691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               84, 35
               

               Conread position:
               150-345
               

               Cow position:
               chr3:23444953-23445136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               150-353
               

               Cow position:
               chr3:41328390-41328201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               150-374
               

               Cow position:
               chr3:53674294-53674516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               150-382
               

               Cow position:
               chr3:59208758-59208530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               226, 87
               

               Conread position:
               150-385
               

               Cow position:
               chr3:50258916-50259154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               94, 208
               

               Conread position:
               150-388
               

               Cow position:
               chr3:56433-56659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               150, 78
               

               Conread position:
               150-388
               

               Cow position:
               chr3:43007456-43007694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               185, 35
               

               Conread position:
               150-388
               

               Cow position:
               chr3:48275777-48275537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               92, 206
               

               Conread position:
               150-388
               

               Cow position:
               chr3:68708060-68708291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               226, 87
               

               Conread position:
               150-389
               

               Cow position:
               chr3:12675089-12675331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 25
               

               Conread position:
               150-389
               

               Cow position:
               chr3:15057665-15057889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               226, 57
               

               Conread position:
               150-389
               

               Cow position:
               chr3:68881168-68881400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               150-389
               

               Cow position:
               chr3:71430263-71430502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               150-398
               

               Cow position:
               chr3:53221957-53221719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               66, 31
               

               Conread position:
               150-398
               

               Cow position:
               chr3:70565794-70566038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 77
               

               Conread position:
               150-399
               

               Cow position:
               chr3:46683950-46683701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               226, 187
               

               Conread position:
               150-406
               

               Cow position:
               chr3:45214696-45214947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               226, 101
               

               Conread position:
               150-407
               

               Cow position:
               chr3:6443184-6442923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               224, 0
               

               Conread position:
               150-407
               

               Cow position:
               chr3:15080802-15081051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               226, 57
               

               Conread position:
               150-407
               

               Cow position:
               chr3:55039474-55039734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               227, 138
               

               Conread position:
               150-407
               

               Cow position:
               chr3:73708991-73708747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               226, 51
               

               Conread position:
               150-408
               

               Cow position:
               chr3:79591938-79592201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               150-413
               

               Cow position:
               chr3:79902450-79902185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 130
               

               Conread position:
               151-413
               

               Cow position:
               chr3:72676035-72675769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 86
               

               Conread position:
               152-413
               

               Cow position:
               chr3:23277601-23277860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               185, 34
               

               Conread position:
               153-259
               

               Cow position:
               chr3:59884131-59884237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               153-274
               

               Cow position:
               chr3:78739796-78739676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               110, 67
               

               Conread position:
               153-284
               

               Cow position:
               chr3:27212302-27212173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               153-288
               

               Cow position:
               chr3:55318962-55319096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               153-288
               

               Cow position:
               chr3:61024362-61024497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               85, 93
               

               Conread position:
               153-301
               

               Cow position:
               chr3:3638128-3637980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               153-305
               

               Cow position:
               chr3:56612301-56612149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               153-314
               

               Cow position:
               chr3:78896588-78896433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               153-316
               

               Cow position:
               chr3:10173192-10173352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               153-333
               

               Cow position:
               chr3:15192506-15192329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               85, 21
               

               Conread position:
               153-334
               

               Cow position:
               chr3:8061066-8060897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               153-334
               

               Cow position:
               chr3:17447671-17447843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               62, 28
               

               Conread position:
               153-334
               

               Cow position:
               chr3:59885328-59885138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               153-335
               

               Cow position:
               chr3:34937784-34937604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               153-347
               

               Cow position:
               chr3:43571681-43571492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               153-348
               

               Cow position:
               chr3:74878648-74878838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               85, 111
               

               Conread position:
               153-351
               

               Cow position:
               chr3:82359983-82359793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               153-363
               

               Cow position:
               chr3:73590058-73590262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               153-364
               

               Cow position:
               chr3:13577248-13577449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               153-364
               

               Cow position:
               chr3:73395062-73394851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               153-365
               

               Cow position:
               chr3:75050681-75050886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               201, 19
               

               Conread position:
               153-367
               

               Cow position:
               chr3:8923986-8923777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               153-367
               

               Cow position:
               chr3:14633046-14633254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               153-375
               

               Cow position:
               chr3:5374273-5374059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               153-375
               

               Cow position:
               chr3:42367561-42367765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               153-375
               

               Cow position:
               chr3:63860951-63861177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 33
               

               Conread position:
               153-375
               

               Cow position:
               chr3:75158300-75158089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               153-376
               

               Cow position:
               chr3:5899764-5899549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               33, 86
               

               Conread position:
               153-380
               

               Cow position:
               chr3:20437711-20437927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               221, 48
               

               Conread position:
               153-380
               

               Cow position:
               chr3:20674932-20675161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               7, 171
               

               Conread position:
               153-380
               

               Cow position:
               chr3:26681863-26682075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               223, 49
               

               Conread position:
               153-380
               

               Cow position:
               chr3:49731700-49731918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               77, 99
               

               Conread position:
               153-380
               

               Cow position:
               chr3:50763064-50762843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               223, 40
               

               Conread position:
               153-384
               

               Cow position:
               chr3:4031911-4031682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 84
               

               Conread position:
               153-385
               

               Cow position:
               chr3:36100776-36100541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               153-386
               

               Cow position:
               chr3:2393022-2393254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 111
               

               Conread position:
               153-386
               

               Cow position:
               chr3:56704603-56704825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 76
               

               Conread position:
               153-388
               

               Cow position:
               chr3:9843527-9843294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 32
               

               Conread position:
               153-388
               

               Cow position:
               chr3:15158983-15158751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               49, 85
               

               Conread position:
               153-388
               

               Cow position:
               chr3:78945894-78946129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 65
               

               Conread position:
               153-389
               

               Cow position:
               chr3:14601771-14602004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 155
               

               Conread position:
               153-389
               

               Cow position:
               chr3:19006600-19006376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               224, 32
               

               Conread position:
               153-389
               

               Cow position:
               chr3:53509744-53509976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               79, 56
               

               Conread position:
               153-390
               

               Cow position:
               chr3:48600858-48600616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               75, 153
               

               Conread position:
               153-394
               

               Cow position:
               chr3:25691695-25691452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 107
               

               Conread position:
               153-394
               

               Cow position:
               chr3:27532716-27532959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               153-394
               

               Cow position:
               chr3:66116170-66116407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               66, 75
               

               Conread position:
               153-395
               

               Cow position:
               chr3:22089336-22089579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               7, 159
               

               Conread position:
               153-398
               

               Cow position:
               chr3:4461551-4461789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               223, 32
               

               Conread position:
               153-398
               

               Cow position:
               chr3:12711977-12712223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 0
               

               Conread position:
               153-398
               

               Cow position:
               chr3:15052011-15052242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               230, 76
               

               Conread position:
               153-398
               

               Cow position:
               chr3:18763834-18763594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               85, 15
               

               Conread position:
               153-398
               

               Cow position:
               chr3:59691835-59691604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               223, 15
               

               Conread position:
               153-398
               

               Cow position:
               chr3:66609902-66610138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 84
               

               Conread position:
               153-398
               

               Cow position:
               chr3:70401842-70401603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 72
               

               Conread position:
               153-399
               

               Cow position:
               chr3:77227263-77227017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               221, 84
               

               Conread position:
               153-402
               

               Cow position:
               chr3:26973520-26973771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               92, 23
               

               Conread position:
               153-403
               

               Cow position:
               chr3:53538462-53538218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               193, 59
               

               Conread position:
               153-406
               

               Cow position:
               chr3:12255418-12255169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               71, 54
               

               Conread position:
               153-406
               

               Cow position:
               chr3:53739245-53739500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 94
               

               Conread position:
               153-406
               

               Cow position:
               chr3:59799188-59798943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               223, 76
               

               Conread position:
               153-407
               

               Cow position:
               chr3:2506535-2506791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 0
               

               Conread position:
               153-407
               

               Cow position:
               chr3:5365618-5365373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               224, 86
               

               Conread position:
               153-407
               

               Cow position:
               chr3:7566484-7566728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 49
               

               Conread position:
               153-407
               

               Cow position:
               chr3:15661759-15662010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 109
               

               Conread position:
               153-407
               

               Cow position:
               chr3:18067076-18066822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 84
               

               Conread position:
               153-407
               

               Cow position:
               chr3:22872106-22872364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 138
               

               Conread position:
               153-407
               

               Cow position:
               chr3:47284776-47284528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               85, 29
               

               Conread position:
               153-407
               

               Cow position:
               chr3:72019054-72018811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               197
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               80, 24
               

               Conread position:
               153-407
               

               Cow position:
               chr3:82056168-82056421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               85, 133
               

               Conread position:
               153-408
               

               Cow position:
               chr3:34270856-34270621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               110, 68
               

               Conread position:
               153-413
               

               Cow position:
               chr3:2483387-2483138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               83, 111
               

               Conread position:
               153-413
               

               Cow position:
               chr3:2674969-2674711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 99
               

               Conread position:
               153-413
               

               Cow position:
               chr3:4332307-4332040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               153-413
               

               Cow position:
               chr3:13899505-13899771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               153-413
               

               Cow position:
               chr3:17695064-17695321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 49
               

               Conread position:
               153-413
               

               Cow position:
               chr3:43528302-43528555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 60
               

               Conread position:
               153-413
               

               Cow position:
               chr3:49119085-49119350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               153-413
               

               Cow position:
               chr3:59630561-59630818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 84
               

               Conread position:
               153-413
               

               Cow position:
               chr3:80581605-80581357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 97
               

               Conread position:
               153-413
               

               Cow position:
               chr3:81940197-81939936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 0
               

               Conread position:
               153-420
               

               Cow position:
               chr3:37041355-37041111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               223, 76
               

               Conread position:
               154-411
               

               Cow position:
               chr3:3738426-3738178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               222, 12
               

               Conread position:
               155-295
               

               Cow position:
               chr3:39606325-39606468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               155-327
               

               Cow position:
               chr3:23215633-23215812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               155-375
               

               Cow position:
               chr3:42588296-42588073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 114
               

               Conread position:
               155-407
               

               Cow position:
               chr3:64010884-64011128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               218, 71
               

               Conread position:
               156-332
               

               Cow position:
               chr3:67930245-67930411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               172, 74
               

               Conread position:
               156-347
               

               Cow position:
               chr3:63332756-63332562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               156-349
               

               Cow position:
               chr3:16362797-16362988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               5, 97
               

               Conread position:
               156-352
               

               Cow position:
               chr3:5044865-5045063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               157
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               156-354
               

               Cow position:
               chr3:48578769-48578586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               156-357
               

               Cow position:
               chr3:61144037-61143835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               103, 17
               

               Conread position:
               156-360
               

               Cow position:
               chr3:51234157-51234357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               5, 120
               

               Conread position:
               156-364
               

               Cow position:
               chr3:81401369-81401569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               156-367
               

               Cow position:
               chr3:52650593-52650797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               156-375
               

               Cow position:
               chr3:30701244-30701046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               149, 71
               

               Conread position:
               156-375
               

               Cow position:
               chr3:44101909-44101705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               74, 124
               

               Conread position:
               156-375
               

               Cow position:
               chr3:57764165-57763947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               156-378
               

               Cow position:
               chr3:67744689-67744908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 46
               

               Conread position:
               156-380
               

               Cow position:
               chr3:80564901-80564681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               218, 81
               

               Conread position:
               156-382
               

               Cow position:
               chr3:15388150-15387927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               220, 16
               

               Conread position:
               156-384
               

               Cow position:
               chr3:17935002-17935209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               219, 25
               

               Conread position:
               156-384
               

               Cow position:
               chr3:38691469-38691692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 104
               

               Conread position:
               156-384
               

               Cow position:
               chr3:73764257-73764477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               26, 46
               

               Conread position:
               156-387
               

               Cow position:
               chr3:28898283-28898511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 124
               

               Conread position:
               156-388
               

               Cow position:
               chr3:21081438-21081675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               91, 45
               

               Conread position:
               156-388
               

               Cow position:
               chr3:29813183-29812954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 82
               

               Conread position:
               156-389
               

               Cow position:
               chr3:3985266-3985039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               7, 82
               

               Conread position:
               156-389
               

               Cow position:
               chr3:44622947-44623188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               104, 73
               

               Conread position:
               156-395
               

               Cow position:
               chr3:17222208-17222439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 28
               

               Conread position:
               156-396
               

               Cow position:
               chr3:11020059-11019820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 150
               

               Conread position:
               156-398
               

               Cow position:
               chr3:2518594-2518837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               220, 0
               

               Conread position:
               156-398
               

               Cow position:
               chr3:48371074-48370831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               25, 82
               

               Conread position:
               156-398
               

               Cow position:
               chr3:59271478-59271259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               218, 75
               

               Conread position:
               156-398
               

               Cow position:
               chr3:66978774-66978543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               220, 58
               

               Conread position:
               156-398
               

               Cow position:
               chr3:69750764-69751001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               198, 74
               

               Conread position:
               156-398
               

               Cow position:
               chr3:72391023-72390783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 111
               

               Conread position:
               156-398
               

               Cow position:
               chr3:72473850-72473607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               220, 0
               

               Conread position:
               156-405
               

               Cow position:
               chr3:29887485-29887734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 29
               

               Conread position:
               156-407
               

               Cow position:
               chr3:31047013-31047254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               217, 73
               

               Conread position:
               156-407
               

               Cow position:
               chr3:54434912-54434661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 73
               

               Conread position:
               156-407
               

               Cow position:
               chr3:55010226-55010464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               82, 101
               

               Conread position:
               156-407
               

               Cow position:
               chr3:81471159-81471409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               65, 16
               

               Conread position:
               156-408
               

               Cow position:
               chr3:2008198-2007961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               240, 15
               

               Conread position:
               156-408
               

               Cow position:
               chr3:68648103-68647847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 0
               

               Conread position:
               156-413
               

               Cow position:
               chr3:7763594-7763348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               198, 46
               

               Conread position:
               156-413
               

               Cow position:
               chr3:14552814-14552560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 40
               

               Conread position:
               156-413
               

               Cow position:
               chr3:16157618-16157367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               83, 16
               

               Conread position:
               156-413
               

               Cow position:
               chr3:48252820-48252579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               220, 16
               

               Conread position:
               156-413
               

               Cow position:
               chr3:59366492-59366232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               156-413
               

               Cow position:
               chr3:61678632-61678373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 111
               

               Conread position:
               156-415
               

               Cow position:
               chr3:61278853-61278595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               65, 118
               

               Conread position:
               156-420
               

               Cow position:
               chr3:31501288-31501026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 33
               

               Conread position:
               156-420
               

               Cow position:
               chr3:57754540-57754805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 21
               

               Conread position:
               156-429
               

               Cow position:
               chr3:28908266-28908523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               251, 46
               

               Conread position:
               157-261
               

               Cow position:
               chr3:30222124-30222019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               157-271
               

               Cow position:
               chr3:19792830-19792716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               157-311
               

               Cow position:
               chr3:55712368-55712213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               157-314
               

               Cow position:
               chr3:25477750-25477597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               157-314
               

               Cow position:
               chr3:76713387-76713537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               73, 100
               

               Conread position:
               157-319
               

               Cow position:
               chr3:55062932-55063088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               157-375
               

               Cow position:
               chr3:59333707-59333499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               127, 43
               

               Conread position:
               157-382
               

               Cow position:
               chr3:49140105-49140331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               119, 72
               

               Conread position:
               157-395
               

               Cow position:
               chr3:80740500-80740281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               218, 61
               

               Conread position:
               157-398
               

               Cow position:
               chr3:46901134-46900895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 63
               

               Conread position:
               157-398
               

               Cow position:
               chr3:53910047-53909814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               76, 15
               

               Conread position:
               157-406
               

               Cow position:
               chr3:69961779-69962020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               219, 13
               

               Conread position:
               157-407
               

               Cow position:
               chr3:7678605-7678364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               190
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               219, 120
               

               Conread position:
               157-407
               

               Cow position:
               chr3:58285962-58286207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               218, 73
               

               Conread position:
               157-410
               

               Cow position:
               chr3:23169130-23169385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 34
               

               Conread position:
               157-413
               

               Cow position:
               chr3:11333376-11333632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               107, 20
               

               Conread position:
               157-413
               

               Cow position:
               chr3:49679068-49678804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               37, 117
               

               Conread position:
               158-285
               

               Cow position:
               chr3:59597119-59596995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               158-316
               

               Cow position:
               chr3:23265358-23265512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               158-372
               

               Cow position:
               chr3:79208062-79208276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 39
               

               Conread position:
               158-398
               

               Cow position:
               chr3:66375254-66375023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               35, 53
               

               Conread position:
               158-407
               

               Cow position:
               chr3:45312985-45312740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               196
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               75, 27
               

               Conread position:
               158-414
               

               Cow position:
               chr3:59474056-59473797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               5, 34
               

               Conread position:
               159-288
               

               Cow position:
               chr3:66884005-66884134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               159-292
               

               Cow position:
               chr3:63269157-63269028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               159-300
               

               Cow position:
               chr3:14598885-14598745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               159-367
               

               Cow position:
               chr3:69416848-69417056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               159-375
               

               Cow position:
               chr3:74234125-74233924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               159-379
               

               Cow position:
               chr3:17456333-17456550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               216, 39
               

               Conread position:
               159-381
               

               Cow position:
               chr3:36570112-36570332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               130, 34
               

               Conread position:
               159-386
               

               Cow position:
               chr3:23876930-23876710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               217, 118
               

               Conread position:
               159-388
               

               Cow position:
               chr3:23945032-23944807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               159-389
               

               Cow position:
               chr3:45534362-45534590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               217, 43
               

               Conread position:
               159-398
               

               Cow position:
               chr3:75727649-75727889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               215, 0
               

               Conread position:
               159-399
               

               Cow position:
               chr3:35975172-35975406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               217, 78
               

               Conread position:
               159-406
               

               Cow position:
               chr3:83921132-83920890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 43
               

               Conread position:
               159-407
               

               Cow position:
               chr3:26894596-26894359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               217, 78
               

               Conread position:
               159-407
               

               Cow position:
               chr3:39066267-39066021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               80, 34
               

               Conread position:
               159-407
               

               Cow position:
               chr3:70895981-70895734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 23
               

               Conread position:
               159-407
               

               Cow position:
               chr3:78077124-78076880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 39
               

               Conread position:
               159-413
               

               Cow position:
               chr3:77188372-77188131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               159-416
               

               Cow position:
               chr3:46341397-46341141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               237, 60
               

               Conread position:
               160-277
               

               Cow position:
               chr3:15751787-15751904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               160-277
               

               Cow position:
               chr3:26739483-26739602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               160-315
               

               Cow position:
               chr3:35005712-35005561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               160-318
               

               Cow position:
               chr3:45211227-45211076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               78, 6
               

               Conread position:
               160-336
               

               Cow position:
               chr3:55373635-55373812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               72, 49
               

               Conread position:
               160-341
               

               Cow position:
               chr3:12705612-12705801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               129, 77
               

               Conread position:
               160-356
               

               Cow position:
               chr3:3556489-3556287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 188
               

               Conread position:
               160-360
               

               Cow position:
               chr3:67165846-67165651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               160-375
               

               Cow position:
               chr3:56703920-56704130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               152, 52
               

               Conread position:
               160-375
               

               Cow position:
               chr3:77225049-77224844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               160-377
               

               Cow position:
               chr3:30008980-30009188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               74, 42
               

               Conread position:
               160-379
               

               Cow position:
               chr3:22171121-22170908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               50, 68
               

               Conread position:
               160-379
               

               Cow position:
               chr3:32596993-32597209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               59, 68
               

               Conread position:
               160-380
               

               Cow position:
               chr3:66900803-66901024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               74, 29
               

               Conread position:
               160-389
               

               Cow position:
               chr3:11949422-11949644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               39, 25
               

               Conread position:
               160-389
               

               Cow position:
               chr3:54862481-54862715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               50, 135
               

               Conread position:
               160-394
               

               Cow position:
               chr3:73777218-73776980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               57, 173
               

               Conread position:
               160-398
               

               Cow position:
               chr3:13118275-13118047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               74, 44
               

               Conread position:
               160-398
               

               Cow position:
               chr3:35884019-35884253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               216, 91
               

               Conread position:
               160-398
               

               Cow position:
               chr3:45648066-45647835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               209, 77
               

               Conread position:
               160-398
               

               Cow position:
               chr3:49460996-49461237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               160-398
               

               Cow position:
               chr3:49787348-49787110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               78, 13
               

               Conread position:
               160-398
               

               Cow position:
               chr3:59588453-59588219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               81, 47
               

               Conread position:
               160-400
               

               Cow position:
               chr3:33327639-33327405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               160-401
               

               Cow position:
               chr3:23092044-23092292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               72, 65
               

               Conread position:
               160-403
               

               Cow position:
               chr3:43657774-43658021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               180, 54
               

               Conread position:
               160-406
               

               Cow position:
               chr3:14263328-14263084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 111
               

               Conread position:
               160-406
               

               Cow position:
               chr3:36174135-36174387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               59, 68
               

               Conread position:
               160-407
               

               Cow position:
               chr3:50462272-50462030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               147, 30
               

               Conread position:
               160-407
               

               Cow position:
               chr3:54782084-54782323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               58, 10
               

               Conread position:
               160-407
               

               Cow position:
               chr3:75479934-75479705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               160-408
               

               Cow position:
               chr3:24852653-24852900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 38
               

               Conread position:
               160-413
               

               Cow position:
               chr3:3164561-3164811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 126
               

               Conread position:
               160-413
               

               Cow position:
               chr3:11254225-11254470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               203, 69
               

               Conread position:
               160-413
               

               Cow position:
               chr3:12324008-12323750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               71, 128
               

               Conread position:
               160-413
               

               Cow position:
               chr3:16547610-16547358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 12
               

               Conread position:
               160-413
               

               Cow position:
               chr3:35299600-35299356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               216, 101
               

               Conread position:
               160-413
               

               Cow position:
               chr3:36672056-36672323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               160-413
               

               Cow position:
               chr3:37599493-37599734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               216, 53
               

               Conread position:
               160-413
               

               Cow position:
               chr3:59649189-59648945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               228, 114
               

               Conread position:
               160-413
               

               Cow position:
               chr3:76172730-76172980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 34
               

               Conread position:
               160-413
               

               Cow position:
               chr3:79220788-79220531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               74, 122
               

               Conread position:
               160-452
               

               Cow position:
               chr3:13301914-13302206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 112
               

               Conread position:
               161-307
               

               Cow position:
               chr3:21693880-21693733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               70, 12
               

               Conread position:
               161-352
               

               Cow position:
               chr3:35074614-35074427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               182, 11
               

               Conread position:
               161-355
               

               Cow position:
               chr3:23270031-23269846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               161-374
               

               Cow position:
               chr3:7331180-7331394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               197, 67
               

               Conread position:
               161-375
               

               Cow position:
               chr3:16809852-16810067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               161-383
               

               Cow position:
               chr3:59206178-59205956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               62, 53
               

               Conread position:
               161-389
               

               Cow position:
               chr3:20471433-20471647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               77, 23
               

               Conread position:
               161-402
               

               Cow position:
               chr3:6689935-6689687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               161-407
               

               Cow position:
               chr3:2538193-2537945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 111
               

               Conread position:
               161-407
               

               Cow position:
               chr3:19717159-19717402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               197, 41
               

               Conread position:
               161-407
               

               Cow position:
               chr3:42423399-42423643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 103
               

               Conread position:
               161-407
               

               Cow position:
               chr3:58968968-58969205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               82, 9
               

               Conread position:
               161-407
               

               Cow position:
               chr3:82473991-82473739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               49, 67
               

               Conread position:
               161-408
               

               Cow position:
               chr3:34096018-34096262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               54, 26
               

               Conread position:
               161-413
               

               Cow position:
               chr3:15954154-15954395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               215, 68
               

               Conread position:
               161-413
               

               Cow position:
               chr3:15955483-15955226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               162-332
               

               Cow position:
               chr3:55106505-55106676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               162-375
               

               Cow position:
               chr3:42483831-42483624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               162-385
               

               Cow position:
               chr3:15655216-15655435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 24
               

               Conread position:
               162-389
               

               Cow position:
               chr3:48433882-48433655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 66
               

               Conread position:
               162-394
               

               Cow position:
               chr3:17284777-17284541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               52, 226
               

               Conread position:
               162-398
               

               Cow position:
               chr3:27286164-27285925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               162-399
               

               Cow position:
               chr3:30463238-30463467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 36
               

               Conread position:
               162-406
               

               Cow position:
               chr3:14437884-14438132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               214, 0
               

               Conread position:
               162-407
               

               Cow position:
               chr3:4663272-4663042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               214, 22
               

               Conread position:
               162-407
               

               Cow position:
               chr3:79884550-79884798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 62
               

               Conread position:
               162-408
               

               Cow position:
               chr3:997893-997646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 77
               

               Conread position:
               162-413
               

               Cow position:
               chr3:57577629-57577381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               70, 25
               

               Conread position:
               162-413
               

               Cow position:
               chr3:58951547-58951303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               214, 32
               

               Conread position:
               162-426
               

               Cow position:
               chr3:78201201-78200936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 31
               

               Conread position:
               162-429
               

               Cow position:
               chr3:18198699-18198431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               212, 241
               

               Conread position:
               163-276
               

               Cow position:
               chr3:16891229-16891117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               163-305
               

               Cow position:
               chr3:27697046-27697189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               163-385
               

               Cow position:
               chr3:65236956-65236738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               76, 139
               

               Conread position:
               163-389
               

               Cow position:
               chr3:68145911-68146112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               213, 100
               

               Conread position:
               163-403
               

               Cow position:
               chr3:44535665-44535907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               167, 111
               

               Conread position:
               163-407
               

               Cow position:
               chr3:5887970-5887733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               238, 43
               

               Conread position:
               163-407
               

               Cow position:
               chr3:6078399-6078643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               213, 234
               

               Conread position:
               163-407
               

               Cow position:
               chr3:53384356-53384595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 18
               

               Conread position:
               163-413
               

               Cow position:
               chr3:20997061-20997290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               213, 31
               

               Conread position:
               163-413
               

               Cow position:
               chr3:42603761-42603510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               136, 41
               

               Conread position:
               164-298
               

               Cow position:
               chr3:38828698-38828563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               164-319
               

               Cow position:
               chr3:25945014-25944857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               164-327
               

               Cow position:
               chr3:53836755-53836913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               66, 61
               

               Conread position:
               164-334
               

               Cow position:
               chr3:188793-188624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               69, 99
               

               Conread position:
               164-380
               

               Cow position:
               chr3:364282-364501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               164-388
               

               Cow position:
               chr3:70129881-70130103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               151, 50
               

               Conread position:
               164-389
               

               Cow position:
               chr3:58383896-58383677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               212, 30
               

               Conread position:
               164-406
               

               Cow position:
               chr3:37186756-37186530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               209, 22
               

               Conread position:
               164-407
               

               Cow position:
               chr3:80655380-80655150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               190, 20
               

               Conread position:
               164-413
               

               Cow position:
               chr3:13512817-13513052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               70, 32
               

               Conread position:
               164-413
               

               Cow position:
               chr3:27289868-27289619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               20, 44
               

               Conread position:
               164-413
               

               Cow position:
               chr3:51604674-51604925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 29
               

               Conread position:
               164-413
               

               Cow position:
               chr3:55117035-55117287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 230
               

               Conread position:
               164-413
               

               Cow position:
               chr3:61857433-61857178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               164-413
               

               Cow position:
               chr3:72777178-72776922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 62
               

               Conread position:
               165-407
               

               Cow position:
               chr3:46506875-46506628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               91, 191
               

               Conread position:
               165-407
               

               Cow position:
               chr3:79921157-79921403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               209, 0
               

               Conread position:
               166-335
               

               Cow position:
               chr3:29334583-29334750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               166-365
               

               Cow position:
               chr3:35915633-35915438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               166-367
               

               Cow position:
               chr3:19751962-19752160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               166-372
               

               Cow position:
               chr3:43307603-43307809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               166-373
               

               Cow position:
               chr3:45958465-45958257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               166-373
               

               Cow position:
               chr3:45961634-45961426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               166-374
               

               Cow position:
               chr3:10124062-10124270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               166-375
               

               Cow position:
               chr3:66603301-66603510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               166-375
               

               Cow position:
               chr3:78443632-78443839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               166-385
               

               Cow position:
               chr3:13686181-13685967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 139
               

               Conread position:
               166-386
               

               Cow position:
               chr3:77886598-77886373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               166-389
               

               Cow position:
               chr3:31119673-31119897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               211, 0
               

               Conread position:
               166-392
               

               Cow position:
               chr3:19198604-19198387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               7, 21
               

               Conread position:
               166-392
               

               Cow position:
               chr3:52137577-52137355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               210, 47
               

               Conread position:
               166-393
               

               Cow position:
               chr3:23011447-23011219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               211, 0
               

               Conread position:
               166-394
               

               Cow position:
               chr3:4635271-4635042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               210, 62
               

               Conread position:
               166-398
               

               Cow position:
               chr3:3651127-3651363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               102, 192
               

               Conread position:
               166-398
               

               Cow position:
               chr3:3836501-3836735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               166-398
               

               Cow position:
               chr3:14453757-14453527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               179, 93
               

               Conread position:
               166-398
               

               Cow position:
               chr3:21022616-21022383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-398
               

               Cow position:
               chr3:21070314-21070542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               210, 85
               

               Conread position:
               166-398
               

               Cow position:
               chr3:65771380-65771614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               30, 47
               

               Conread position:
               166-399
               

               Cow position:
               chr3:3618902-3618668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr3:14261534-14261300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr3:14889401-14889167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr3:14923752-14923517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               171, 179
               

               Conread position:
               166-399
               

               Cow position:
               chr3:15687592-15687822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 44
               

               Conread position:
               166-399
               

               Cow position:
               chr3:24266299-24266065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr3:35613244-35613010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr3:36122276-36122042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr3:40194972-40194738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr3:41206470-41206704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr3:43463358-43463591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               191, 116
               

               Conread position:
               166-399
               

               Cow position:
               chr3:44927915-44927681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr3:47107021-47106787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr3:52225521-52225287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr3:62305160-62304926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               50, 60
               

               Conread position:
               166-399
               

               Cow position:
               chr3:68888471-68888705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr3:73001838-73001604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr3:74061569-74061335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr3:75264840-75265074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               40, 44
               

               Conread position:
               166-400
               

               Cow position:
               chr3:18855023-18854792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 130
               

               Conread position:
               166-400
               

               Cow position:
               chr3:34949929-34949694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-402
               

               Cow position:
               chr3:26639056-26638821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               93, 19
               

               Conread position:
               166-404
               

               Cow position:
               chr3:70450280-70450038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-405
               

               Cow position:
               chr3:60092649-60092892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               166-406
               

               Cow position:
               chr3:34571330-34571087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-406
               

               Cow position:
               chr3:47520309-47520065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-406
               

               Cow position:
               chr3:48605629-48605385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-406
               

               Cow position:
               chr3:49540834-49541073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               210, 19
               

               Conread position:
               166-406
               

               Cow position:
               chr3:53879164-53879408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-406
               

               Cow position:
               chr3:59603896-59603656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               208, 121
               

               Conread position:
               166-407
               

               Cow position:
               chr3:11836-11591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:859668-859423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:1035189-1034944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:2364158-2364403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:2874567-2874814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:2922731-2922486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:3302057-3301814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               210, 62
               

               Conread position:
               166-407
               

               Cow position:
               chr3:5065024-5064781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               210, 85
               

               Conread position:
               166-407
               

               Cow position:
               chr3:5117361-5117118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               208, 27
               

               Conread position:
               166-407
               

               Cow position:
               chr3:5361689-5361934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:5950497-5950739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:6024930-6024685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:6058653-6058898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:6262999-6262754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:6839133-6838888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:6863693-6863937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               230, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:7280759-7280514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:7359887-7360132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:7475493-7475732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               210, 220
               

               Conread position:
               166-407
               

               Cow position:
               chr3:7696952-7696707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:7768015-7767770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:8240861-8240616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:8331378-8331133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 60
               

               Conread position:
               166-407
               

               Cow position:
               chr3:10018047-10017802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:10051002-10050756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               167, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:10448369-10448614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:11186593-11186838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:11385606-11385361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:11410170-11410415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               163, 179
               

               Conread position:
               166-407
               

               Cow position:
               chr3:11418648-11418403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               40, 60
               

               Conread position:
               166-407
               

               Cow position:
               chr3:12933097-12932852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:13274445-13274690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:14027862-14028107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:14144479-14144724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:14863272-14863517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:15233062-15233306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 154
               

               Conread position:
               166-407
               

               Cow position:
               chr3:16233646-16233891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:18051820-18052065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:18111051-18111296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:18715553-18715796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               208, 18
               

               Conread position:
               166-407
               

               Cow position:
               chr3:19234875-19234630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               40, 44
               

               Conread position:
               166-407
               

               Cow position:
               chr3:19977521-19977766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:20863163-20862918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:20997753-20997992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               208, 18
               

               Conread position:
               166-407
               

               Cow position:
               chr3:21100901-21100659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:21178156-21178400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               211, 116
               

               Conread position:
               166-407
               

               Cow position:
               chr3:22490722-22490478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               210, 20
               

               Conread position:
               166-407
               

               Cow position:
               chr3:22919620-22919377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               64, 18
               

               Conread position:
               166-407
               

               Cow position:
               chr3:23285879-23286121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:26217784-26218028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               208, 73
               

               Conread position:
               166-407
               

               Cow position:
               chr3:26892592-26892347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:27673934-27674179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:27687261-27687506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:28434475-28434720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 44
               

               Conread position:
               166-407
               

               Cow position:
               chr3:28472460-28472215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:28934005-28933760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:29461083-29461328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:29559985-29560229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 40
               

               Conread position:
               166-407
               

               Cow position:
               chr3:30568216-30567971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:30609366-30609611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:30753684-30753439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:32307262-32307017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:32411465-32411710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:33124160-33124404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               211, 202
               

               Conread position:
               166-407
               

               Cow position:
               chr3:33215024-33214779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:36014259-36014014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:36126586-36126341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:36417841-36417596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:36861009-36861254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:37281014-37280769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:37894926-37894680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 61
               

               Conread position:
               166-407
               

               Cow position:
               chr3:38870663-38870422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               210, 113
               

               Conread position:
               166-407
               

               Cow position:
               chr3:39858074-39857831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               211, 40
               

               Conread position:
               166-407
               

               Cow position:
               chr3:39920847-39921092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               97, 102
               

               Conread position:
               166-407
               

               Cow position:
               chr3:40205101-40205346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:40689025-40689266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               210, 176
               

               Conread position:
               166-407
               

               Cow position:
               chr3:40827787-40827542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:41396469-41396224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:41568858-41569103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:42359243-42359002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               210, 121
               

               Conread position:
               166-407
               

               Cow position:
               chr3:42976216-42976459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               210, 27
               

               Conread position:
               166-407
               

               Cow position:
               chr3:43633750-43633995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:44335486-44335243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               210, 62
               

               Conread position:
               166-407
               

               Cow position:
               chr3:44352663-44352418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:45025846-45026090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               210, 223
               

               Conread position:
               166-407
               

               Cow position:
               chr3:46128037-46128282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:46261471-46261226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:47233298-47233543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:47978637-47978391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               79, 122
               

               Conread position:
               166-407
               

               Cow position:
               chr3:48043381-48043136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:48059489-48059734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:49415752-49415995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               210, 18
               

               Conread position:
               166-407
               

               Cow position:
               chr3:49530685-49530930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:49604346-49604591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:49930144-49930389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:50218090-50217845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:50922498-50922254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               210, 94
               

               Conread position:
               166-407
               

               Cow position:
               chr3:51242202-51242446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               208, 105
               

               Conread position:
               166-407
               

               Cow position:
               chr3:51362236-51362481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:51519965-51520210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:51666818-51666573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               40, 52
               

               Conread position:
               166-407
               

               Cow position:
               chr3:51857952-51857707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:53519873-53519635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               198, 113
               

               Conread position:
               166-407
               

               Cow position:
               chr3:54495996-54495751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:58060680-58060929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               62, 27
               

               Conread position:
               166-407
               

               Cow position:
               chr3:58283078-58283322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               210, 51
               

               Conread position:
               166-407
               

               Cow position:
               chr3:59747720-59747965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:59865580-59865336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               210, 164
               

               Conread position:
               166-407
               

               Cow position:
               chr3:60514008-60514253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:63945047-63945287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               167, 121
               

               Conread position:
               166-407
               

               Cow position:
               chr3:64198413-64198169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               233, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:64875204-64875447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               233, 214
               

               Conread position:
               166-407
               

               Cow position:
               chr3:65086034-65085790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               97, 102
               

               Conread position:
               166-407
               

               Cow position:
               chr3:67022493-67022251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               208, 50
               

               Conread position:
               166-407
               

               Cow position:
               chr3:67264889-67264644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:68259822-68259577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:68631421-68631666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:68688497-68688744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:69486638-69486393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:69945006-69945251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:70731401-70731156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:70871455-70871210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:72173914-72174159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               71, 40
               

               Conread position:
               166-407
               

               Cow position:
               chr3:73211917-73211672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               211, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:77754027-77753783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               210, 59
               

               Conread position:
               166-407
               

               Cow position:
               chr3:78111043-78110801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               230, 134
               

               Conread position:
               166-407
               

               Cow position:
               chr3:79669212-79668967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:80741972-80741727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr3:81064525-81064281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 171
               

               Conread position:
               166-407
               

               Cow position:
               chr3:83479509-83479264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-408
               

               Cow position:
               chr3:3954424-3954182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               210, 110
               

               Conread position:
               166-408
               

               Cow position:
               chr3:20796394-20796148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-410
               

               Cow position:
               chr3:22632871-22632623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-410
               

               Cow position:
               chr3:81033843-81034092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               166-413
               

               Cow position:
               chr3:16380645-16380895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               208, 62
               

               Conread position:
               166-413
               

               Cow position:
               chr3:64375621-64375869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               124, 62
               

               Conread position:
               167-398
               

               Cow position:
               chr3:11640360-11640134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 94
               

               Conread position:
               167-398
               

               Cow position:
               chr3:15786494-15786263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               113, 92
               

               Conread position:
               167-407
               

               Cow position:
               chr3:14864968-14864728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               210, 96
               

               Conread position:
               167-407
               

               Cow position:
               chr3:16619653-16619897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               70, 39
               

               Conread position:
               167-407
               

               Cow position:
               chr3:28634797-28635041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               209, 0
               

               Conread position:
               167-407
               

               Cow position:
               chr3:56697871-56697627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               151, 165
               

               Conread position:
               167-408
               

               Cow position:
               chr3:53572827-53573063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               67, 47
               

               Conread position:
               168-280
               

               Cow position:
               chr3:74502394-74502507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               168-388
               

               Cow position:
               chr3:56102362-56102148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               97, 46
               

               Conread position:
               168-407
               

               Cow position:
               chr3:65990005-65989762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               168-407
               

               Cow position:
               chr3:69929739-69929982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               168-424
               

               Cow position:
               chr3:70676150-70675894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               201, 86
               

               Conread position:
               169-316
               

               Cow position:
               chr3:495314-495461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               169-367
               

               Cow position:
               chr3:31276173-31276372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               101, 68
               

               Conread position:
               169-385
               

               Cow position:
               chr3:79112449-79112664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               120, 201
               

               Conread position:
               169-389
               

               Cow position:
               chr3:31309429-31309645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               169-389
               

               Cow position:
               chr3:51609746-51609525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 0
               

               Conread position:
               169-398
               

               Cow position:
               chr3:13310905-13311132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 29
               

               Conread position:
               169-400
               

               Cow position:
               chr3:48852036-48852268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 176
               

               Conread position:
               170-387
               

               Cow position:
               chr3:14429898-14430114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               204, 165
               

               Conread position:
               170-388
               

               Cow position:
               chr3:51255712-51255494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               49, 58
               

               Conread position:
               170-388
               

               Cow position:
               chr3:63179786-63179578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               60, 84
               

               Conread position:
               170-392
               

               Cow position:
               chr3:79148345-79148570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               170-402
               

               Cow position:
               chr3:51013910-51014140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               206, 36
               

               Conread position:
               170-407
               

               Cow position:
               chr3:5495571-5495809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               78, 106
               

               Conread position:
               170-407
               

               Cow position:
               chr3:20746658-20746891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               206, 109
               

               Conread position:
               170-407
               

               Cow position:
               chr3:56159094-56158854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               184, 128
               

               Conread position:
               170-407
               

               Cow position:
               chr3:68342329-68342566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               49, 58
               

               Conread position:
               170-407
               

               Cow position:
               chr3:78471894-78472134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               36, 40
               

               Conread position:
               172-317
               

               Cow position:
               chr3:46006104-46006249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               172-335
               

               Cow position:
               chr3:4861609-4861453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               172-397
               

               Cow position:
               chr3:20772782-20772559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               189, 87
               

               Conread position:
               172-398
               

               Cow position:
               chr3:42461623-42461400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               47, 56
               

               Conread position:
               172-407
               

               Cow position:
               chr3:18393466-18393696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               186
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               201, 67
               

               Conread position:
               173-302
               

               Cow position:
               chr3:20841936-20842063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               173-331
               

               Cow position:
               chr3:21547175-21547334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               173-347
               

               Cow position:
               chr3:43233429-43233255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               173-367
               

               Cow position:
               chr3:70913156-70913347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 107
               

               Conread position:
               173-375
               

               Cow position:
               chr3:42489385-42489582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 65
               

               Conread position:
               173-382
               

               Cow position:
               chr3:59701930-59701732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               64, 89
               

               Conread position:
               173-384
               

               Cow position:
               chr3:23448217-23448415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 36
               

               Conread position:
               173-388
               

               Cow position:
               chr3:55815259-55815054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               201, 41
               

               Conread position:
               173-389
               

               Cow position:
               chr3:33252956-33253171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 109
               

               Conread position:
               173-392
               

               Cow position:
               chr3:72334-72121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               201, 34
               

               Conread position:
               173-394
               

               Cow position:
               chr3:70333555-70333769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               57, 82
               

               Conread position:
               173-399
               

               Cow position:
               chr3:13361541-13361314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               203, 0
               

               Conread position:
               173-407
               

               Cow position:
               chr3:1133170-1133404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               72, 120
               

               Conread position:
               173-413
               

               Cow position:
               chr3:6265433-6265189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               204, 0
               

               Conread position:
               173-413
               

               Cow position:
               chr3:11026842-11026608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               26, 77
               

               Conread position:
               173-413
               

               Cow position:
               chr3:52147749-52147994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               57, 39
               

               Conread position:
               173-413
               

               Cow position:
               chr3:53904100-53903871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               203, 31
               

               Conread position:
               173-413
               

               Cow position:
               chr3:68303250-68303010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               55, 35
               

               Conread position:
               173-413
               

               Cow position:
               chr3:80973274-80973035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               203, 18
               

               Conread position:
               174-407
               

               Cow position:
               chr3:54340492-54340728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               176, 40
               

               Conread position:
               175-379
               

               Cow position:
               chr3:26493302-26493505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               175-380
               

               Cow position:
               chr3:52665123-52664920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               175-399
               

               Cow position:
               chr3:18874593-18874818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               175-399
               

               Cow position:
               chr3:27610056-27609831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               175-399
               

               Cow position:
               chr3:64877603-64877379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               199, 50
               

               Conread position:
               175-406
               

               Cow position:
               chr3:18279510-18279743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               201, 103
               

               Conread position:
               175-407
               

               Cow position:
               chr3:470013-470248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               199, 53
               

               Conread position:
               175-407
               

               Cow position:
               chr3:2573620-2573384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               175-407
               

               Cow position:
               chr3:17710255-17710028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               202, 99
               

               Conread position:
               175-407
               

               Cow position:
               chr3:21341043-21341275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               78, 62
               

               Conread position:
               175-407
               

               Cow position:
               chr3:36595779-36595543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               175-407
               

               Cow position:
               chr3:40052236-40052001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               161, 169
               

               Conread position:
               175-407
               

               Cow position:
               chr3:73762545-73762770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               201, 77
               

               Conread position:
               175-407
               

               Cow position:
               chr3:83884609-83884371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               176-324
               

               Cow position:
               chr3:56301426-56301573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               176-385
               

               Cow position:
               chr3:61467525-61467322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               200, 26
               

               Conread position:
               176-387
               

               Cow position:
               chr3:29596309-29596106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               78, 34
               

               Conread position:
               176-388
               

               Cow position:
               chr3:44861385-44861598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               42, 62
               

               Conread position:
               176-388
               

               Cow position:
               chr3:74699473-74699685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               200, 146
               

               Conread position:
               176-401
               

               Cow position:
               chr3:64172362-64172141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               198, 53
               

               Conread position:
               176-407
               

               Cow position:
               chr3:62542234-62542002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               198, 91
               

               Conread position:
               177-398
               

               Cow position:
               chr3:20136927-20137153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               177-398
               

               Cow position:
               chr3:65273479-65273699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               197, 132
               

               Conread position:
               177-407
               

               Cow position:
               chr3:31056082-31056314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 37
               

               Conread position:
               177-407
               

               Cow position:
               chr3:57457725-57457496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               167, 102
               

               Conread position:
               177-413
               

               Cow position:
               chr3:18887507-18887261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               49, 21
               

               Conread position:
               178-375
               

               Cow position:
               chr3:34392181-34392372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               112, 59
               

               Conread position:
               179-388
               

               Cow position:
               chr3:54050105-54050309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               55, 34
               

               Conread position:
               179-408
               

               Cow position:
               chr3:45524181-45523952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               55, 108
               

               Conread position:
               180-407
               

               Cow position:
               chr3:65325457-65325684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               196, 219
               

               Conread position:
               180-410
               

               Cow position:
               chr3:34525725-34525959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               58, 175
               

               Conread position:
               182-375
               

               Cow position:
               chr3:18607285-18607092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               7, 31
               

               Conread position:
               182-407
               

               Cow position:
               chr3:35919645-35919416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               182-407
               

               Cow position:
               chr3:53935380-53935151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               194, 0
               

               Conread position:
               182-407
               

               Cow position:
               chr3:60054895-60054664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               183-334
               

               Cow position:
               chr3:78067222-78067373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               183-406
               

               Cow position:
               chr3:14446696-14446478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               193, 90
               

               Conread position:
               184-384
               

               Cow position:
               chr3:83369227-83369036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               192, 29
               

               Conread position:
               185-398
               

               Cow position:
               chr3:77276498-77276704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               191, 44
               

               Conread position:
               185-399
               

               Cow position:
               chr3:8556876-8557082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               189, 52
               

               Conread position:
               185-407
               

               Cow position:
               chr3:29310939-29311161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               169, 9
               

               Conread position:
               185-407
               

               Cow position:
               chr3:48530556-48530326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               182
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               53, 103
               

               Conread position:
               185-407
               

               Cow position:
               chr3:51012623-51012845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 94
               

               Conread position:
               185-419
               

               Cow position:
               chr3:20257114-20256868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               186-315
               

               Cow position:
               chr3:11063290-11063162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               186-315
               

               Cow position:
               chr3:78092600-78092726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               186-326
               

               Cow position:
               chr3:15506359-15506220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               186-372
               

               Cow position:
               chr3:525258-525081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               186-397
               

               Cow position:
               chr3:45946444-45946656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               186-398
               

               Cow position:
               chr3:16752346-16752547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               190, 21
               

               Conread position:
               186-398
               

               Cow position:
               chr3:66738686-66738473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               112, 169
               

               Conread position:
               186-399
               

               Cow position:
               chr3:82019929-82020150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               186-402
               

               Cow position:
               chr3:45294151-45293934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               186-407
               

               Cow position:
               chr3:303302-303078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               190, 119
               

               Conread position:
               186-407
               

               Cow position:
               chr3:18671104-18670879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               186-407
               

               Cow position:
               chr3:30352363-30352138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               186-407
               

               Cow position:
               chr3:31023398-31023173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               186-407
               

               Cow position:
               chr3:54809068-54808847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               188, 101
               

               Conread position:
               186-407
               

               Cow position:
               chr3:62999089-62999310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               52, 183
               

               Conread position:
               186-407
               

               Cow position:
               chr3:65474509-65474284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               186-414
               

               Cow position:
               chr3:22676183-22676398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               190, 51
               

               Conread position:
               186-419
               

               Cow position:
               chr3:42563365-42563133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               31, 42
               

               Conread position:
               187-399
               

               Cow position:
               chr3:2430932-2431144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               189, 22
               

               Conread position:
               187-407
               

               Cow position:
               chr3:5851016-5851239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 51
               

               Conread position:
               187-407
               

               Cow position:
               chr3:56976084-56976299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               186, 86
               

               Conread position:
               187-407
               

               Cow position:
               chr3:72131388-72131613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 20
               

               Conread position:
               187-407
               

               Cow position:
               chr3:72604262-72604038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               188, 0
               

               Conread position:
               188-314
               

               Cow position:
               chr3:5082732-5082857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 19
               

               Conread position:
               188-366
               

               Cow position:
               chr3:83455244-83455419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               104, 41
               

               Conread position:
               188-389
               

               Cow position:
               chr3:53222733-53222933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               46, 93
               

               Conread position:
               188-407
               

               Cow position:
               chr3:14717716-14717502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               187, 13
               

               Conread position:
               188-407
               

               Cow position:
               chr3:36656863-36657082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               188, 90
               

               Conread position:
               190-358
               

               Cow position:
               chr3:52608091-52607924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               190-389
               

               Cow position:
               chr3:42594749-42594947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 48
               

               Conread position:
               190-407
               

               Cow position:
               chr3:38347107-38346891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               48, 24
               

               Conread position:
               193-393
               

               Cow position:
               chr3:18895689-18895487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 109
               

               Conread position:
               193-398
               

               Cow position:
               chr3:23416968-23417165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               181, 21
               

               Conread position:
               193-398
               

               Cow position:
               chr3:27553461-27553251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               8, 171
               

               Conread position:
               193-407
               

               Cow position:
               chr3:7337873-7338090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               166, 14
               

               Conread position:
               193-407
               

               Cow position:
               chr3:9116804-9116598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               181, 44
               

               Conread position:
               193-408
               

               Cow position:
               chr3:48566759-48566978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               41, 62
               

               Conread position:
               194-375
               

               Cow position:
               chr3:55460595-55460777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 34
               

               Conread position:
               194-386
               

               Cow position:
               chr3:80202509-80202319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               182, 71
               

               Conread position:
               194-394
               

               Cow position:
               chr3:35473694-35473493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               194-407
               

               Cow position:
               chr3:40231836-40231621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               7, 206
               

               Conread position:
               194-407
               

               Cow position:
               chr3:53428995-53429200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 13
               

               Conread position:
               194-407
               

               Cow position:
               chr3:62321232-62321447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 155
               

               Conread position:
               194-407
               

               Cow position:
               chr3:62611806-62611602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               7, 35
               

               Conread position:
               195-375
               

               Cow position:
               chr3:37485879-37486059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               103, 42
               

               Conread position:
               195-375
               

               Cow position:
               chr3:61262703-61262527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               20, 43
               

               Conread position:
               195-407
               

               Cow position:
               chr3:65020235-65020020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 70
               

               Conread position:
               196-371
               

               Cow position:
               chr3:45279365-45279185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               38, 144
               

               Conread position:
               197-405
               

               Cow position:
               chr3:59392207-59392412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               198-398
               

               Cow position:
               chr3:24639489-24639290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               159
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               35, 154
               

               Conread position:
               198-407
               

               Cow position:
               chr3:10244729-10244516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               198-407
               

               Cow position:
               chr3:14280743-14280532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 83
               

               Conread position:
               198-407
               

               Cow position:
               chr3:40568126-40568337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               178, 145
               

               Conread position:
               198-413
               

               Cow position:
               chr3:79905022-79905230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               35, 123
               

               Conread position:
               198-413
               

               Cow position:
               chr3:83988383-83988166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               35, 86
               

               Conread position:
               200-367
               

               Cow position:
               chr3:48923617-48923781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               200-385
               

               Cow position:
               chr3:33693544-33693362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               177, 25
               

               Conread position:
               200-398
               

               Cow position:
               chr3:58158569-58158764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               175, 28
               

               Conread position:
               200-398
               

               Cow position:
               chr3:73961786-73961979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               34, 81
               

               Conread position:
               200-407
               

               Cow position:
               chr3:28357700-28357911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               176, 0
               

               Conread position:
               200-413
               

               Cow position:
               chr3:59604765-59604553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               174, 14
               

               Conread position:
               201-394
               

               Cow position:
               chr3:44603165-44603360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               201-413
               

               Cow position:
               chr3:32325883-32326099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               203-373
               

               Cow position:
               chr3:84368481-84368643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 77
               

               Conread position:
               203-407
               

               Cow position:
               chr3:22907940-22908143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               163
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               88, 35
               

               Conread position:
               206-390
               

               Cow position:
               chr3:79613128-79612948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               170, 15
               

               Conread position:
               206-407
               

               Cow position:
               chr3:18245531-18245728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               123, 73
               

               Conread position:
               207-398
               

               Cow position:
               chr3:68514672-68514849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               169, 30
               

               Conread position:
               211-407
               

               Cow position:
               chr3:68704733-68704932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               163, 49
               

               Conread position:
               211-408
               

               Cow position:
               chr3:71488436-71488632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               165, 19
               

               Conread position:
               212-396
               

               Cow position:
               chr3:60389515-60389346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               164, 11
               

               Conread position:
               214-313
               

               Cow position:
               chr3:15153524-15153425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               214-385
               

               Cow position:
               chr3:8901299-8901134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               162, 23
               

               Conread position:
               214-389
               

               Cow position:
               chr3:49388720-49388551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               142, 46
               

               Conread position:
               215-373
               

               Cow position:
               chr3:75164033-75164184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               215-407
               

               Cow position:
               chr3:82618267-82618079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               161, 22
               

               Conread position:
               216-389
               

               Cow position:
               chr3:24276587-24276416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               160, 14
               

               Conread position:
               216-414
               

               Cow position:
               chr3:48811102-48811304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               17, 82
               

               Conread position:
               217-386
               

               Cow position:
               chr3:45333721-45333888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               162, 20
               

               Conread position:
               217-413
               

               Cow position:
               chr3:76092163-76091970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               159, 20
               

               Conread position:
               218-388
               

               Cow position:
               chr3:58135157-58135324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               16, 56
               

               Conread position:
               218-398
               

               Cow position:
               chr3:11276840-11277014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               120, 60
               

               Conread position:
               219-366
               

               Cow position:
               chr3:22716405-22716548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               140, 18
               

               Conread position:
               220-407
               

               Cow position:
               chr3:24823854-24823662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               220-407
               

               Cow position:
               chr3:48900627-48900814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               78, 59
               

               Conread position:
               221-367
               

               Cow position:
               chr3:17451057-17451202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               126
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               221-375
               

               Cow position:
               chr3:76411172-76411325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               221-381
               

               Cow position:
               chr3:51228034-51227872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               105, 38
               

               Conread position:
               221-386
               

               Cow position:
               chr3:44254551-44254715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               12, 134
               

               Conread position:
               221-389
               

               Cow position:
               chr3:52836026-52836193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               88, 100
               

               Conread position:
               221-404
               

               Cow position:
               chr3:56125625-56125442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               169, 156
               

               Conread position:
               221-407
               

               Cow position:
               chr3:2628191-2628006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               221-407
               

               Cow position:
               chr3:55107231-55107420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               221-410
               

               Cow position:
               chr3:1498748-1498557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               221-413
               

               Cow position:
               chr3:51033220-51033027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               156, 58
               

               Conread position:
               221-420
               

               Cow position:
               chr3:41947244-41947443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               155, 147
               

               Conread position:
               222-407
               

               Cow position:
               chr3:68291443-68291254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               11, 84
               

               Conread position:
               224-398
               

               Cow position:
               chr3:18917979-18917800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               225-398
               

               Cow position:
               chr3:50329205-50329375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               151, 54
               

               Conread position:
               225-407
               

               Cow position:
               chr3:18179622-18179438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               152, 22
               

               Conread position:
               225-407
               

               Cow position:
               chr3:23942952-23942766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               225-407
               

               Cow position:
               chr3:39232754-39232568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               225-413
               

               Cow position:
               chr3:20226026-20225838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               151, 65
               

               Conread position:
               225-413
               

               Cow position:
               chr3:32363698-32363891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               226-413
               

               Cow position:
               chr3:24531701-24531520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               25, 54
               

               Conread position:
               227-406
               

               Cow position:
               chr3:72531054-72530872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               132, 165
               

               Conread position:
               229-388
               

               Cow position:
               chr3:17681035-17680872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               230-385
               

               Cow position:
               chr3:77560013-77559857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               230-386
               

               Cow position:
               chr3:16886012-16886167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               146, 122
               

               Conread position:
               230-390
               

               Cow position:
               chr3:51813629-51813787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               143, 14
               

               Conread position:
               230-398
               

               Cow position:
               chr3:51315351-51315188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               231-357
               

               Cow position:
               chr3:5536042-5536168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-378
               

               Cow position:
               chr3:17742376-17742230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               231-386
               

               Cow position:
               chr3:42914320-42914165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               145, 91
               

               Conread position:
               231-388
               

               Cow position:
               chr3:58130868-58130710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               231-388
               

               Cow position:
               chr3:66964433-66964583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               143, 46
               

               Conread position:
               231-393
               

               Cow position:
               chr3:5889642-5889808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               66, 103
               

               Conread position:
               231-406
               

               Cow position:
               chr3:41157422-41157600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               50, 170
               

               Conread position:
               231-406
               

               Cow position:
               chr3:70754233-70754057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               30, 49
               

               Conread position:
               231-406
               

               Cow position:
               chr3:80138893-80139065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr3:41818228-41818400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               165, 48
               

               Conread position:
               231-407
               

               Cow position:
               chr3:51146798-51146977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr3:51491330-51491156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               145, 83
               

               Conread position:
               231-411
               

               Cow position:
               chr3:202567-202748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               145, 112
               

               Conread position:
               231-413
               

               Cow position:
               chr3:75143168-75143350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               143, 48
               

               Conread position:
               232-386
               

               Cow position:
               chr3:16622163-16622316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               144, 82
               

               Conread position:
               232-386
               

               Cow position:
               chr3:49307831-49307983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 58
               

               Conread position:
               232-388
               

               Cow position:
               chr3:470559-470716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               232-389
               

               Cow position:
               chr3:58865597-58865750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               142, 36
               

               Conread position:
               232-398
               

               Cow position:
               chr3:6403159-6402997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               144, 45
               

               Conread position:
               232-398
               

               Cow position:
               chr3:40100808-40100972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               232-405
               

               Cow position:
               chr3:64294544-64294369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               232-405
               

               Cow position:
               chr3:78242207-78242032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               232-406
               

               Cow position:
               chr3:35029232-35029410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               120, 88
               

               Conread position:
               232-407
               

               Cow position:
               chr3:19560257-19560434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               142, 114
               

               Conread position:
               232-407
               

               Cow position:
               chr3:62824620-62824791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               146, 55
               

               Conread position:
               232-407
               

               Cow position:
               chr3:79271934-79272102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               144, 34
               

               Conread position:
               232-408
               

               Cow position:
               chr3:37580451-37580637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               232-410
               

               Cow position:
               chr3:62272022-62272201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               144, 50
               

               Conread position:
               232-413
               

               Cow position:
               chr3:19711448-19711633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               30, 93
               

               Conread position:
               233-388
               

               Cow position:
               chr3:72018776-72018621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               143, 121
               

               Conread position:
               233-389
               

               Cow position:
               chr3:66885172-66885331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               233-390
               

               Cow position:
               chr3:12670832-12670985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               126, 44
               

               Conread position:
               233-407
               

               Cow position:
               chr3:21302569-21302743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               121, 60
               

               Conread position:
               233-407
               

               Cow position:
               chr3:28597003-28597177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               143, 165
               

               Conread position:
               233-458
               

               Cow position:
               chr3:33728517-33728304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 98
               

               Conread position:
               235-406
               

               Cow position:
               chr3:59179269-59179097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               141, 119
               

               Conread position:
               235-407
               

               Cow position:
               chr3:40284316-40284492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               236-398
               

               Cow position:
               chr3:59345109-59344944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               236-399
               

               Cow position:
               chr3:15530660-15530501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               141, 90
               

               Conread position:
               236-408
               

               Cow position:
               chr3:6434156-6433982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               141, 63
               

               Conread position:
               237-361
               

               Cow position:
               chr3:9638736-9638855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               237-407
               

               Cow position:
               chr3:57022428-57022266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               140, 27
               

               Conread position:
               238-375
               

               Cow position:
               chr3:30907778-30907911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               116, 41
               

               Conread position:
               239-388
               

               Cow position:
               chr3:54740015-54740161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               137, 17
               

               Conread position:
               239-414
               

               Cow position:
               chr3:45183992-45184161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               133, 39
               

               Conread position:
               239-435
               

               Cow position:
               chr3:53573690-53573886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               137, 62
               

               Conread position:
               240-382
               

               Cow position:
               chr3:69144401-69144545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               50, 106
               

               Conread position:
               240-407
               

               Cow position:
               chr3:13350771-13350605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               114, 148
               

               Conread position:
               241-407
               

               Cow position:
               chr3:75999932-76000102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               241-413
               

               Cow position:
               chr3:2335140-2334966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               153, 113
               

               Conread position:
               244-399
               

               Cow position:
               chr3:37982265-37982421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               27, 16
               

               Conread position:
               246-407
               

               Cow position:
               chr3:41053662-41053502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               130, 46
               

               Conread position:
               246-420
               

               Cow position:
               chr3:15549344-15549172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               20, 103
               

               Conread position:
               248-389
               

               Cow position:
               chr3:53508228-53508089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               126, 101
               

               Conread position:
               249-380
               

               Cow position:
               chr3:59040292-59040161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               127, 105
               

               Conread position:
               249-398
               

               Cow position:
               chr3:3884175-3884326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 107
               

               Conread position:
               254-413
               

               Cow position:
               chr3:42671165-42671006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               123, 105
               

               Conread position:
               256-407
               

               Cow position:
               chr3:79094227-79094378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               120, 132
               

               Conread position:
               257-370
               

               Cow position:
               chr3:73460820-73460709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               258-411
               

               Cow position:
               chr3:83728034-83728186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               116, 85
               

               Conread position:
               260-407
               

               Cow position:
               chr3:66805608-66805458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               117, 126
               

               Conread position:
               262-386
               

               Cow position:
               chr3:16890569-16890446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               117, 17
               

               Conread position:
               263-413
               

               Cow position:
               chr3:52487114-52486964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               113, 25
               

               Conread position:
               263-413
               

               Cow position:
               chr3:76614477-76614325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               10, 24
               

               Conread position:
               265-375
               

               Cow position:
               chr3:34114914-34115022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               265-406
               

               Cow position:
               chr3:66014240-66014094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               265-413
               

               Cow position:
               chr3:29172213-29172065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               111, 14
               

               Conread position:
               267-398
               

               Cow position:
               chr3:63687932-63688062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               109, 13
               

               Conread position:
               267-407
               

               Cow position:
               chr3:17331600-17331456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               271-398
               

               Cow position:
               chr3:50099322-50099193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               282-398
               

               Cow position:
               chr3:18700381-18700498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               286-407
               

               Cow position:
               chr3:69766424-69766548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               90, 68
               

               Conread position:
               291-407
               

               Cow position:
               chr3:522533-522413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               293-399
               

               Cow position:
               chr3:26981157-26981050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               294-407
               

               Cow position:
               chr3:50069584-50069467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 0
               
Show alignments to all cow chromosomes.