Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rnbm29b_l4.5
        

               Conread position:
               4-132
               

               Cow position:
               chr5:51255579-51255450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               136-357
               

               Cow position:
               chr5:11427231-11427451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               97, 24
               

               Conread position:
               138-386
               

               Cow position:
               chr5:75436883-75437136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 11
               

               Conread position:
               138-398
               

               Cow position:
               chr5:38830988-38831246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               22, 141
               

               Conread position:
               138-398
               

               Cow position:
               chr5:50821788-50821537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               9, 100
               

               Conread position:
               138-398
               

               Cow position:
               chr5:53855703-53855453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               98, 148
               

               Conread position:
               138-398
               

               Cow position:
               chr5:60715357-60715606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               17, 31
               

               Conread position:
               139-254
               

               Cow position:
               chr5:23678696-23678814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               139-268
               

               Cow position:
               chr5:60448219-60448090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               120, 10
               

               Conread position:
               139-271
               

               Cow position:
               chr5:18289135-18289002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               139-279
               

               Cow position:
               chr5:45273498-45273636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               139-281
               

               Cow position:
               chr5:7921396-7921537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               139-284
               

               Cow position:
               chr5:29097371-29097219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               6, 25
               

               Conread position:
               139-298
               

               Cow position:
               chr5:35459291-35459445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               8, 92
               

               Conread position:
               139-311
               

               Cow position:
               chr5:64060291-64060457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               6, 23
               

               Conread position:
               139-313
               

               Cow position:
               chr5:55955911-55955740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               139-313
               

               Cow position:
               chr5:66972432-66972257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               139-314
               

               Cow position:
               chr5:30629156-30629324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               139-316
               

               Cow position:
               chr5:41452662-41452835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 70
               

               Conread position:
               139-316
               

               Cow position:
               chr5:69520894-69520722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               139-334
               

               Cow position:
               chr5:17644651-17644842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               139-341
               

               Cow position:
               chr5:74019767-74019964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               66, 75
               

               Conread position:
               139-346
               

               Cow position:
               chr5:3668901-3668700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               139-351
               

               Cow position:
               chr5:23168823-23169022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 70
               

               Conread position:
               139-357
               

               Cow position:
               chr5:29212947-29212739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               139-364
               

               Cow position:
               chr5:24199458-24199683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               204, 17
               

               Conread position:
               139-364
               

               Cow position:
               chr5:49361989-49362207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               94, 10
               

               Conread position:
               139-366
               

               Cow position:
               chr5:7044702-7044929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               13, 99
               

               Conread position:
               139-366
               

               Cow position:
               chr5:62142679-62142452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 73
               

               Conread position:
               139-367
               

               Cow position:
               chr5:21964292-21964072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               38, 137
               

               Conread position:
               139-373
               

               Cow position:
               chr5:25495346-25495563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               139-374
               

               Cow position:
               chr5:18090728-18090501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               139-374
               

               Cow position:
               chr5:54311339-54311107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 141
               

               Conread position:
               139-375
               

               Cow position:
               chr5:1766346-1766572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               215, 72
               

               Conread position:
               139-375
               

               Cow position:
               chr5:3627148-3627395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               139-375
               

               Cow position:
               chr5:9430458-9430686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               8, 46
               

               Conread position:
               139-375
               

               Cow position:
               chr5:30253745-30253518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               139-375
               

               Cow position:
               chr5:32696819-32697040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               139-375
               

               Cow position:
               chr5:73080204-73079985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               139-376
               

               Cow position:
               chr5:56820257-56820488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 91
               

               Conread position:
               139-377
               

               Cow position:
               chr5:8821009-8821241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 56
               

               Conread position:
               139-378
               

               Cow position:
               chr5:40387869-40388097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 80
               

               Conread position:
               139-380
               

               Cow position:
               chr5:24996218-24996457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               16, 99
               

               Conread position:
               139-380
               

               Cow position:
               chr5:39695653-39695424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               22, 31
               

               Conread position:
               139-381
               

               Cow position:
               chr5:28324362-28324111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 102
               

               Conread position:
               139-382
               

               Cow position:
               chr5:41165091-41164853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               139-383
               

               Cow position:
               chr5:73253096-73252862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               139-385
               

               Cow position:
               chr5:9859712-9859956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 16
               

               Conread position:
               139-385
               

               Cow position:
               chr5:48573766-48573999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               237, 23
               

               Conread position:
               139-386
               

               Cow position:
               chr5:2500180-2500420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               95, 143
               

               Conread position:
               139-386
               

               Cow position:
               chr5:3639484-3639754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               94, 9
               

               Conread position:
               139-386
               

               Cow position:
               chr5:12709892-12709648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               99, 142
               

               Conread position:
               139-386
               

               Cow position:
               chr5:20779392-20779620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               139-388
               

               Cow position:
               chr5:33467039-33467281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               80, 9
               

               Conread position:
               139-388
               

               Cow position:
               chr5:34921833-34922076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               240, 24
               

               Conread position:
               139-388
               

               Cow position:
               chr5:62172421-62172178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               139-389
               

               Cow position:
               chr5:40109496-40109259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               12, 72
               

               Conread position:
               139-389
               

               Cow position:
               chr5:43929732-43929976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               8, 57
               

               Conread position:
               139-389
               

               Cow position:
               chr5:53835717-53835475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               139-389
               

               Cow position:
               chr5:55966877-55967125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 15
               

               Conread position:
               139-398
               

               Cow position:
               chr5:58929-59177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               139-398
               

               Cow position:
               chr5:6130357-6130105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               139-398
               

               Cow position:
               chr5:20783623-20783375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               13, 42
               

               Conread position:
               139-398
               

               Cow position:
               chr5:50975905-50975636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               20, 107
               

               Conread position:
               139-398
               

               Cow position:
               chr5:58793603-58793866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 105
               

               Conread position:
               139-398
               

               Cow position:
               chr5:64321757-64321497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 9
               

               Conread position:
               139-398
               

               Cow position:
               chr5:65924686-65924952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               15, 174
               

               Conread position:
               139-398
               

               Cow position:
               chr5:67932463-67932714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               230, 38
               

               Conread position:
               139-404
               

               Cow position:
               chr5:51503012-51502754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               236, 13
               

               Conread position:
               139-405
               

               Cow position:
               chr5:8024190-8024449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               16, 102
               

               Conread position:
               139-405
               

               Cow position:
               chr5:20345165-20344912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               99, 10
               

               Conread position:
               139-406
               

               Cow position:
               chr5:14314527-14314260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 9
               

               Conread position:
               139-406
               

               Cow position:
               chr5:26647725-26647456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               237, 24
               

               Conread position:
               139-406
               

               Cow position:
               chr5:52000226-51999961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 98
               

               Conread position:
               139-407
               

               Cow position:
               chr5:1058535-1058804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               235, 81
               

               Conread position:
               139-407
               

               Cow position:
               chr5:4571578-4571306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               235, 0
               

               Conread position:
               139-407
               

               Cow position:
               chr5:5111070-5111340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 90
               

               Conread position:
               139-407
               

               Cow position:
               chr5:10261234-10261505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               238, 63
               

               Conread position:
               139-407
               

               Cow position:
               chr5:16185091-16184829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 98
               

               Conread position:
               139-407
               

               Cow position:
               chr5:16893771-16894032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               139-407
               

               Cow position:
               chr5:17028098-17027835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               15, 75
               

               Conread position:
               139-407
               

               Cow position:
               chr5:24485431-24485673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               12, 80
               

               Conread position:
               139-407
               

               Cow position:
               chr5:25231005-25231274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               11, 64
               

               Conread position:
               139-407
               

               Cow position:
               chr5:26467629-26467359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 91
               

               Conread position:
               139-407
               

               Cow position:
               chr5:29681084-29680815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               118, 22
               

               Conread position:
               139-407
               

               Cow position:
               chr5:41522798-41523053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 28
               

               Conread position:
               139-407
               

               Cow position:
               chr5:41604631-41604347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 162
               

               Conread position:
               139-407
               

               Cow position:
               chr5:48224578-48224837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               139-407
               

               Cow position:
               chr5:52165174-52165442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 215
               

               Conread position:
               139-407
               

               Cow position:
               chr5:52243408-52243678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               235, 54
               

               Conread position:
               139-407
               

               Cow position:
               chr5:57935105-57935376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 89
               

               Conread position:
               139-407
               

               Cow position:
               chr5:63992169-63992427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               215, 54
               

               Conread position:
               139-407
               

               Cow position:
               chr5:73222688-73222435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               139-409
               

               Cow position:
               chr5:26094163-26094430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               8, 42
               

               Conread position:
               139-413
               

               Cow position:
               chr5:61725970-61725701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               85, 46
               

               Conread position:
               139-414
               

               Cow position:
               chr5:42845591-42845870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               7, 134
               

               Conread position:
               139-416
               

               Cow position:
               chr5:32394602-32394326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               151, 9
               

               Conread position:
               139-420
               

               Cow position:
               chr5:61488103-61488383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               15, 205
               

               Conread position:
               139-461
               

               Cow position:
               chr5:51490753-51491067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 140
               

               Conread position:
               139-478
               

               Cow position:
               chr5:42677236-42676912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               8, 79
               

               Conread position:
               140-313
               

               Cow position:
               chr5:43448639-43448810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               140-324
               

               Cow position:
               chr5:53145881-53146063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 90
               

               Conread position:
               140-375
               

               Cow position:
               chr5:15426532-15426301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               140-375
               

               Cow position:
               chr5:41303084-41303318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               20, 90
               

               Conread position:
               140-375
               

               Cow position:
               chr5:56070859-56070626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               140-375
               

               Cow position:
               chr5:74858577-74858346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 65
               

               Conread position:
               140-386
               

               Cow position:
               chr5:43737953-43738187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               236, 13
               

               Conread position:
               140-387
               

               Cow position:
               chr5:60126373-60126135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               140-388
               

               Cow position:
               chr5:15317430-15317186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 88
               

               Conread position:
               140-388
               

               Cow position:
               chr5:72903228-72903465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               65, 20
               

               Conread position:
               140-389
               

               Cow position:
               chr5:26562158-26561910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               98, 13
               

               Conread position:
               140-389
               

               Cow position:
               chr5:35684940-35684692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               12, 76
               

               Conread position:
               140-389
               

               Cow position:
               chr5:54350359-54350603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               7, 128
               

               Conread position:
               140-390
               

               Cow position:
               chr5:32140706-32140948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               236, 58
               

               Conread position:
               140-398
               

               Cow position:
               chr5:30302896-30302647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               236, 99
               

               Conread position:
               140-404
               

               Cow position:
               chr5:34115653-34115406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               236, 97
               

               Conread position:
               140-405
               

               Cow position:
               chr5:35208266-35208004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               140-406
               

               Cow position:
               chr5:34288469-34288729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               236, 13
               

               Conread position:
               140-407
               

               Cow position:
               chr5:28927586-28927860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 97
               

               Conread position:
               140-407
               

               Cow position:
               chr5:30487244-30486988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               41, 128
               

               Conread position:
               140-407
               

               Cow position:
               chr5:35498540-35498269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               236, 0
               

               Conread position:
               140-407
               

               Cow position:
               chr5:55428563-55428293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               140, 26
               

               Conread position:
               140-407
               

               Cow position:
               chr5:57829999-57830270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               236, 0
               

               Conread position:
               140-407
               

               Cow position:
               chr5:59474028-59473758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               234, 13
               

               Conread position:
               140-407
               

               Cow position:
               chr5:72150252-72149988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 100
               

               Conread position:
               141-288
               

               Cow position:
               chr5:65883772-65883920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 23
               

               Conread position:
               141-308
               

               Cow position:
               chr5:66581967-66581803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               89, 135
               

               Conread position:
               141-311
               

               Cow position:
               chr5:19335782-19335957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 152
               

               Conread position:
               141-332
               

               Cow position:
               chr5:6670193-6670382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               76, 57
               

               Conread position:
               141-342
               

               Cow position:
               chr5:8162818-8163018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               89, 123
               

               Conread position:
               141-348
               

               Cow position:
               chr5:45409323-45409125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               93, 20
               

               Conread position:
               141-355
               

               Cow position:
               chr5:44049702-44049495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               92, 20
               

               Conread position:
               141-356
               

               Cow position:
               chr5:4280451-4280255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               17, 72
               

               Conread position:
               141-361
               

               Cow position:
               chr5:28456402-28456625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               96, 84
               

               Conread position:
               141-361
               

               Cow position:
               chr5:28459703-28459927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               96, 84
               

               Conread position:
               141-367
               

               Cow position:
               chr5:72286910-72287130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               54, 139
               

               Conread position:
               141-372
               

               Cow position:
               chr5:37425744-37425519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               13, 77
               

               Conread position:
               141-380
               

               Cow position:
               chr5:43992324-43992092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 120
               

               Conread position:
               141-386
               

               Cow position:
               chr5:41636872-41636634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               78, 47
               

               Conread position:
               141-389
               

               Cow position:
               chr5:44994039-44994279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 43
               

               Conread position:
               141-389
               

               Cow position:
               chr5:63964169-63964415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               93, 15
               

               Conread position:
               141-396
               

               Cow position:
               chr5:65588703-65588463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               76, 43
               

               Conread position:
               141-398
               

               Cow position:
               chr5:5035513-5035762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               235, 24
               

               Conread position:
               141-398
               

               Cow position:
               chr5:27690055-27690314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               19, 68
               

               Conread position:
               141-399
               

               Cow position:
               chr5:13453210-13453469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               233, 0
               

               Conread position:
               141-405
               

               Cow position:
               chr5:41531078-41531347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               141-406
               

               Cow position:
               chr5:4797314-4797575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               233, 96
               

               Conread position:
               141-406
               

               Cow position:
               chr5:6045294-6045024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 97
               

               Conread position:
               141-406
               

               Cow position:
               chr5:21039973-21040235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               97, 31
               

               Conread position:
               141-406
               

               Cow position:
               chr5:34050117-34049847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 20
               

               Conread position:
               141-406
               

               Cow position:
               chr5:44752315-44752574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               233, 42
               

               Conread position:
               141-407
               

               Cow position:
               chr5:4599725-4599995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               233, 0
               

               Conread position:
               141-407
               

               Cow position:
               chr5:11675724-11675993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               75, 35
               

               Conread position:
               141-407
               

               Cow position:
               chr5:19891098-19890827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               141-407
               

               Cow position:
               chr5:20341299-20341569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               196, 204
               

               Conread position:
               141-407
               

               Cow position:
               chr5:37608977-37609247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               96, 65
               

               Conread position:
               141-407
               

               Cow position:
               chr5:46587033-46587303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               233, 0
               

               Conread position:
               141-407
               

               Cow position:
               chr5:64844127-64844380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 14
               

               Conread position:
               141-408
               

               Cow position:
               chr5:22738111-22737841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               26, 118
               

               Conread position:
               141-408
               

               Cow position:
               chr5:29828051-29827789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 98
               

               Conread position:
               141-408
               

               Cow position:
               chr5:59297958-59298223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 20
               

               Conread position:
               141-413
               

               Cow position:
               chr5:3281835-3281562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 23
               

               Conread position:
               141-413
               

               Cow position:
               chr5:15479126-15478839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               97, 61
               

               Conread position:
               141-413
               

               Cow position:
               chr5:59082194-59082461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               93, 20
               

               Conread position:
               141-413
               

               Cow position:
               chr5:61030222-61030498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               76, 90
               

               Conread position:
               141-413
               

               Cow position:
               chr5:61576545-61576270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 20
               

               Conread position:
               142-281
               

               Cow position:
               chr5:25447564-25447427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 122
               

               Conread position:
               142-307
               

               Cow position:
               chr5:54060277-54060114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               142-316
               

               Cow position:
               chr5:56317299-56317126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               13, 66
               

               Conread position:
               142-356
               

               Cow position:
               chr5:64758770-64758972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               142-367
               

               Cow position:
               chr5:16025459-16025680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               22, 44
               

               Conread position:
               142-375
               

               Cow position:
               chr5:1276463-1276702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               66, 219
               

               Conread position:
               142-388
               

               Cow position:
               chr5:56385231-56384986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               212, 190
               

               Conread position:
               142-389
               

               Cow position:
               chr5:458492-458230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               84, 144
               

               Conread position:
               142-389
               

               Cow position:
               chr5:72310706-72310473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               142-392
               

               Cow position:
               chr5:32956095-32956335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               70, 76
               

               Conread position:
               142-399
               

               Cow position:
               chr5:59325834-59326080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               62, 73
               

               Conread position:
               142-407
               

               Cow position:
               chr5:6086556-6086825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               18, 96
               

               Conread position:
               142-407
               

               Cow position:
               chr5:9073730-9073997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               217, 14
               

               Conread position:
               142-407
               

               Cow position:
               chr5:18117947-18118214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               234, 7
               

               Conread position:
               142-407
               

               Cow position:
               chr5:45225823-45226092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 137
               

               Conread position:
               142-407
               

               Cow position:
               chr5:49559166-49558899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               102, 13
               

               Conread position:
               142-407
               

               Cow position:
               chr5:56524169-56523911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 11
               

               Conread position:
               142-413
               

               Cow position:
               chr5:359940-360214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               17, 142
               

               Conread position:
               142-413
               

               Cow position:
               chr5:34528554-34528295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 30
               

               Conread position:
               142-420
               

               Cow position:
               chr5:34638886-34638613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 96
               

               Conread position:
               143-272
               

               Cow position:
               chr5:58490717-58490589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               143-308
               

               Cow position:
               chr5:21920376-21920207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               143-318
               

               Cow position:
               chr5:43816610-43816782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               143-360
               

               Cow position:
               chr5:75230678-75230471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               89, 29
               

               Conread position:
               143-375
               

               Cow position:
               chr5:9234075-9234308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               11, 96
               

               Conread position:
               143-375
               

               Cow position:
               chr5:64137254-64137024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               90, 146
               

               Conread position:
               143-395
               

               Cow position:
               chr5:45170370-45170114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               16, 75
               

               Conread position:
               143-398
               

               Cow position:
               chr5:35763274-35763039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               233, 18
               

               Conread position:
               143-398
               

               Cow position:
               chr5:55756425-55756693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               143-407
               

               Cow position:
               chr5:16206153-16206405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               11, 90
               

               Conread position:
               143-407
               

               Cow position:
               chr5:17630878-17631136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               211, 42
               

               Conread position:
               143-407
               

               Cow position:
               chr5:17999492-17999759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 135
               

               Conread position:
               143-407
               

               Cow position:
               chr5:64523868-64524142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               115, 27
               

               Conread position:
               143-408
               

               Cow position:
               chr5:66815571-66815845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               85, 18
               

               Conread position:
               143-413
               

               Cow position:
               chr5:6503883-6504139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               91, 59
               

               Conread position:
               143-413
               

               Cow position:
               chr5:21944397-21944112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               143-413
               

               Cow position:
               chr5:42748157-42747892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 118
               

               Conread position:
               144-330
               

               Cow position:
               chr5:47323464-47323268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               144-333
               

               Cow position:
               chr5:52668029-52667844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               144-407
               

               Cow position:
               chr5:66112155-66112419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               252, 84
               

               Conread position:
               144-413
               

               Cow position:
               chr5:34887200-34887467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               145, 33
               

               Conread position:
               145-407
               

               Cow position:
               chr5:62107493-62107758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               229, 83
               

               Conread position:
               145-408
               

               Cow position:
               chr5:28248170-28247912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 19
               

               Conread position:
               145-408
               

               Cow position:
               chr5:47313473-47313209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 19
               

               Conread position:
               148-316
               

               Cow position:
               chr5:41010002-41010165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               148-375
               

               Cow position:
               chr5:3771843-3771619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               89, 112
               

               Conread position:
               148-384
               

               Cow position:
               chr5:14904076-14904304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               21, 55
               

               Conread position:
               148-398
               

               Cow position:
               chr5:9894128-9894378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               11, 87
               

               Conread position:
               148-401
               

               Cow position:
               chr5:6575596-6575836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               82, 37
               

               Conread position:
               149-335
               

               Cow position:
               chr5:4220979-4220793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               9, 89
               

               Conread position:
               149-335
               

               Cow position:
               chr5:69461324-69461147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               149-353
               

               Cow position:
               chr5:8994573-8994771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               161
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               149-358
               

               Cow position:
               chr5:43395148-43395348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               82, 23
               

               Conread position:
               149-358
               

               Cow position:
               chr5:57737099-57736904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               149-367
               

               Cow position:
               chr5:56028535-56028749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               149-375
               

               Cow position:
               chr5:57074341-57074562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               66, 12
               

               Conread position:
               149-375
               

               Cow position:
               chr5:57127007-57126788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               84, 58
               

               Conread position:
               149-375
               

               Cow position:
               chr5:69773561-69773344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               73, 24
               

               Conread position:
               149-383
               

               Cow position:
               chr5:34885166-34885392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               92, 53
               

               Conread position:
               149-386
               

               Cow position:
               chr5:38833115-38832878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               139, 44
               

               Conread position:
               149-394
               

               Cow position:
               chr5:36679441-36679687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               226, 0
               

               Conread position:
               149-398
               

               Cow position:
               chr5:21617450-21617204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               227, 15
               

               Conread position:
               149-398
               

               Cow position:
               chr5:65752851-65752608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               149-398
               

               Cow position:
               chr5:65887012-65887265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 209
               

               Conread position:
               149-398
               

               Cow position:
               chr5:72035092-72035336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               88, 70
               

               Conread position:
               149-402
               

               Cow position:
               chr5:61600412-61600157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 7
               

               Conread position:
               149-407
               

               Cow position:
               chr5:15882472-15882738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               149-407
               

               Cow position:
               chr5:30276690-30276432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               165, 12
               

               Conread position:
               149-407
               

               Cow position:
               chr5:35145343-35145087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 79
               

               Conread position:
               149-407
               

               Cow position:
               chr5:44848026-44848274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               67, 94
               

               Conread position:
               149-408
               

               Cow position:
               chr5:21525164-21524900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               149-408
               

               Cow position:
               chr5:27015675-27015428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               250, 24
               

               Conread position:
               149-408
               

               Cow position:
               chr5:45706039-45705783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               149-413
               

               Cow position:
               chr5:3242481-3242734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 80
               

               Conread position:
               149-413
               

               Cow position:
               chr5:31469589-31469852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 7
               

               Conread position:
               149-418
               

               Cow position:
               chr5:14550587-14550860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 0
               

               Conread position:
               149-419
               

               Cow position:
               chr5:12149533-12149273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               207
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               85, 53
               

               Conread position:
               149-458
               

               Cow position:
               chr5:51076653-51076963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               9, 80
               

               Conread position:
               150-316
               

               Cow position:
               chr5:30092630-30092798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               88, 143
               

               Conread position:
               150-388
               

               Cow position:
               chr5:27102802-27103028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               150-389
               

               Cow position:
               chr5:47601811-47601575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 11
               

               Conread position:
               150-390
               

               Cow position:
               chr5:21828859-21828621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 87
               

               Conread position:
               150-396
               

               Cow position:
               chr5:3492188-3491952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 107
               

               Conread position:
               150-398
               

               Cow position:
               chr5:26990385-26990142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               226, 79
               

               Conread position:
               150-398
               

               Cow position:
               chr5:31640415-31640176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               22, 73
               

               Conread position:
               150-398
               

               Cow position:
               chr5:51309965-51309716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               224, 0
               

               Conread position:
               150-407
               

               Cow position:
               chr5:23354729-23354475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               227, 20
               

               Conread position:
               150-407
               

               Cow position:
               chr5:45845701-45845956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 43
               

               Conread position:
               150-407
               

               Cow position:
               chr5:55942404-55942661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               226, 16
               

               Conread position:
               150-410
               

               Cow position:
               chr5:34463591-34463855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               154, 129
               

               Conread position:
               150-413
               

               Cow position:
               chr5:31096808-31097074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 65
               

               Conread position:
               150-419
               

               Cow position:
               chr5:51357508-51357775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 11
               

               Conread position:
               153-289
               

               Cow position:
               chr5:19294499-19294631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               153-305
               

               Cow position:
               chr5:44673678-44673526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               153-308
               

               Cow position:
               chr5:71579165-71579013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               153-315
               

               Cow position:
               chr5:30949927-30950087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               153-316
               

               Cow position:
               chr5:12866828-12866997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               153-322
               

               Cow position:
               chr5:59115377-59115206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               59, 115
               

               Conread position:
               153-323
               

               Cow position:
               chr5:19778589-19778759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               153-324
               

               Cow position:
               chr5:51935182-51935006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               153-329
               

               Cow position:
               chr5:39242208-39242371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               153-335
               

               Cow position:
               chr5:48009858-48010034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 85
               

               Conread position:
               153-341
               

               Cow position:
               chr5:22643234-22643411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               12, 50
               

               Conread position:
               153-343
               

               Cow position:
               chr5:34562003-34561813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               17, 85
               

               Conread position:
               153-347
               

               Cow position:
               chr5:32282326-32282131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               153-348
               

               Cow position:
               chr5:9390535-9390335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               49, 79
               

               Conread position:
               153-357
               

               Cow position:
               chr5:55821364-55821158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               76, 116
               

               Conread position:
               153-358
               

               Cow position:
               chr5:18898966-18898773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               153-358
               

               Cow position:
               chr5:63185266-63185464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               153-359
               

               Cow position:
               chr5:47547727-47547928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               153-364
               

               Cow position:
               chr5:26262686-26262890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               153-365
               

               Cow position:
               chr5:57271275-57271483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               79, 112
               

               Conread position:
               153-367
               

               Cow position:
               chr5:2309567-2309784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               81, 24
               

               Conread position:
               153-371
               

               Cow position:
               chr5:48757927-48757721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               153-373
               

               Cow position:
               chr5:72173016-72172798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               153-374
               

               Cow position:
               chr5:39710832-39710613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               114, 51
               

               Conread position:
               153-375
               

               Cow position:
               chr5:71454613-71454823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               204, 19
               

               Conread position:
               153-376
               

               Cow position:
               chr5:56134978-56135197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 61
               

               Conread position:
               153-378
               

               Cow position:
               chr5:55145373-55145593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               153-379
               

               Cow position:
               chr5:39442284-39442061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               81, 37
               

               Conread position:
               153-380
               

               Cow position:
               chr5:4032002-4032222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 111
               

               Conread position:
               153-380
               

               Cow position:
               chr5:17063100-17063327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 75
               

               Conread position:
               153-386
               

               Cow position:
               chr5:56433794-56433562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               137, 76
               

               Conread position:
               153-387
               

               Cow position:
               chr5:37646556-37646792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 86
               

               Conread position:
               153-387
               

               Cow position:
               chr5:49685280-49685521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               85, 108
               

               Conread position:
               153-388
               

               Cow position:
               chr5:34300906-34300684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               201, 76
               

               Conread position:
               153-388
               

               Cow position:
               chr5:37646062-37645833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               153-388
               

               Cow position:
               chr5:37713907-37714146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               51, 70
               

               Conread position:
               153-388
               

               Cow position:
               chr5:40356875-40357110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 161
               

               Conread position:
               153-388
               

               Cow position:
               chr5:42744774-42744556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               221, 20
               

               Conread position:
               153-388
               

               Cow position:
               chr5:66831723-66831955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               153-388
               

               Cow position:
               chr5:68604849-68604618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               33, 85
               

               Conread position:
               153-389
               

               Cow position:
               chr5:1343864-1344100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               223, 216
               

               Conread position:
               153-389
               

               Cow position:
               chr5:32963641-32963871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 41
               

               Conread position:
               153-389
               

               Cow position:
               chr5:53842273-53842051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               153-389
               

               Cow position:
               chr5:58856094-58855862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 76
               

               Conread position:
               153-391
               

               Cow position:
               chr5:45037011-45036782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               153-398
               

               Cow position:
               chr5:29771506-29771267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               153-398
               

               Cow position:
               chr5:34441803-34442044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               223, 9
               

               Conread position:
               153-398
               

               Cow position:
               chr5:35209486-35209723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               77, 61
               

               Conread position:
               153-398
               

               Cow position:
               chr5:38805358-38805595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               116, 56
               

               Conread position:
               153-398
               

               Cow position:
               chr5:41229696-41229461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               223, 49
               

               Conread position:
               153-398
               

               Cow position:
               chr5:41545905-41546141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               160, 11
               

               Conread position:
               153-398
               

               Cow position:
               chr5:47871052-47871301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               153-398
               

               Cow position:
               chr5:50637817-50637580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               8, 55
               

               Conread position:
               153-398
               

               Cow position:
               chr5:51314857-51315099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               201, 49
               

               Conread position:
               153-398
               

               Cow position:
               chr5:58519415-58519650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               81, 20
               

               Conread position:
               153-398
               

               Cow position:
               chr5:62870054-62870286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               223, 40
               

               Conread position:
               153-399
               

               Cow position:
               chr5:22839482-22839726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               71, 61
               

               Conread position:
               153-402
               

               Cow position:
               chr5:37377853-37377624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               221, 20
               

               Conread position:
               153-405
               

               Cow position:
               chr5:9083330-9083073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               221, 197
               

               Conread position:
               153-406
               

               Cow position:
               chr5:61840182-61839926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 131
               

               Conread position:
               153-407
               

               Cow position:
               chr5:6987153-6986895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               112, 73
               

               Conread position:
               153-407
               

               Cow position:
               chr5:14420353-14420608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 55
               

               Conread position:
               153-407
               

               Cow position:
               chr5:28946072-28946322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               57, 95
               

               Conread position:
               153-407
               

               Cow position:
               chr5:43923168-43923412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 47
               

               Conread position:
               153-407
               

               Cow position:
               chr5:44796742-44796978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               223, 20
               

               Conread position:
               153-407
               

               Cow position:
               chr5:63987459-63987710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               205
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               82, 40
               

               Conread position:
               153-407
               

               Cow position:
               chr5:65932938-65933191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 123
               

               Conread position:
               153-408
               

               Cow position:
               chr5:42064193-42063939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 114
               

               Conread position:
               153-408
               

               Cow position:
               chr5:42667400-42667656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               96, 32
               

               Conread position:
               153-413
               

               Cow position:
               chr5:39094545-39094284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 135
               

               Conread position:
               153-413
               

               Cow position:
               chr5:39937096-39936834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               83, 63
               

               Conread position:
               153-413
               

               Cow position:
               chr5:41951104-41951350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               224, 56
               

               Conread position:
               153-413
               

               Cow position:
               chr5:50723038-50722781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 20
               

               Conread position:
               153-413
               

               Cow position:
               chr5:54404901-54405163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               153-413
               

               Cow position:
               chr5:58460405-58460674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               153-432
               

               Cow position:
               chr5:24349098-24348823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 124
               

               Conread position:
               154-387
               

               Cow position:
               chr5:32975564-32975791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               84, 7
               

               Conread position:
               155-373
               

               Cow position:
               chr5:5257310-5257522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 17
               

               Conread position:
               155-390
               

               Cow position:
               chr5:65776394-65776628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               221, 82
               

               Conread position:
               156-277
               

               Cow position:
               chr5:31020151-31020268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               156-303
               

               Cow position:
               chr5:47696459-47696598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               156-316
               

               Cow position:
               chr5:29980000-29980154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               156-331
               

               Cow position:
               chr5:37808683-37808848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               156-341
               

               Cow position:
               chr5:50215568-50215752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               156-348
               

               Cow position:
               chr5:56518223-56518410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               156-352
               

               Cow position:
               chr5:35449234-35449049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               156-358
               

               Cow position:
               chr5:40039783-40039981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               156-358
               

               Cow position:
               chr5:71494806-71494606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               81, 34
               

               Conread position:
               156-362
               

               Cow position:
               chr5:35235721-35235923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 59
               

               Conread position:
               156-373
               

               Cow position:
               chr5:54086530-54086315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               75, 197
               

               Conread position:
               156-374
               

               Cow position:
               chr5:22242789-22243011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               89, 37
               

               Conread position:
               156-375
               

               Cow position:
               chr5:27155011-27154795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               18, 82
               

               Conread position:
               156-375
               

               Cow position:
               chr5:34184217-34183990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               156-375
               

               Cow position:
               chr5:64823328-64823540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               156-380
               

               Cow position:
               chr5:29353147-29353362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               219, 47
               

               Conread position:
               156-380
               

               Cow position:
               chr5:37065080-37064861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               156-381
               

               Cow position:
               chr5:72006867-72007087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               220, 81
               

               Conread position:
               156-382
               

               Cow position:
               chr5:22102314-22102547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               33, 114
               

               Conread position:
               156-382
               

               Cow position:
               chr5:36855192-36854977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               220, 109
               

               Conread position:
               156-386
               

               Cow position:
               chr5:30845098-30844873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               220, 29
               

               Conread position:
               156-388
               

               Cow position:
               chr5:40927994-40928214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               220, 21
               

               Conread position:
               156-389
               

               Cow position:
               chr5:1247250-1247035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               156-389
               

               Cow position:
               chr5:58144614-58144848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 123
               

               Conread position:
               156-398
               

               Cow position:
               chr5:18574160-18573919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 51
               

               Conread position:
               156-398
               

               Cow position:
               chr5:43474834-43474596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 82
               

               Conread position:
               156-398
               

               Cow position:
               chr5:47316984-47317219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               220, 72
               

               Conread position:
               156-398
               

               Cow position:
               chr5:72564749-72564507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 106
               

               Conread position:
               156-399
               

               Cow position:
               chr5:11229682-11229925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               134, 83
               

               Conread position:
               156-399
               

               Cow position:
               chr5:49821129-49820890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               82, 27
               

               Conread position:
               156-402
               

               Cow position:
               chr5:7140121-7140349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               69, 116
               

               Conread position:
               156-406
               

               Cow position:
               chr5:16509083-16508834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 115
               

               Conread position:
               156-407
               

               Cow position:
               chr5:9090034-9090283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 20
               

               Conread position:
               156-407
               

               Cow position:
               chr5:64393145-64392891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               219, 72
               

               Conread position:
               156-410
               

               Cow position:
               chr5:42777751-42777509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               156-413
               

               Cow position:
               chr5:1104875-1105129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 226
               

               Conread position:
               156-413
               

               Cow position:
               chr5:4552133-4551863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               65, 213
               

               Conread position:
               156-413
               

               Cow position:
               chr5:30816706-30816446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 93
               

               Conread position:
               156-413
               

               Cow position:
               chr5:37941806-37942062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               220, 21
               

               Conread position:
               156-413
               

               Cow position:
               chr5:51151371-51151632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               82, 21
               

               Conread position:
               156-413
               

               Cow position:
               chr5:57327784-57327519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 234
               

               Conread position:
               156-413
               

               Cow position:
               chr5:60520149-60519906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               156-413
               

               Cow position:
               chr5:65941265-65941522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 28
               

               Conread position:
               157-354
               

               Cow position:
               chr5:72845794-72845979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               157-355
               

               Cow position:
               chr5:51053664-51053855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               158
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               157-364
               

               Cow position:
               chr5:5848203-5848403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               41, 81
               

               Conread position:
               157-374
               

               Cow position:
               chr5:31434247-31434039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               157-380
               

               Cow position:
               chr5:6683369-6683581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               58, 80
               

               Conread position:
               157-388
               

               Cow position:
               chr5:32338980-32339216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               123, 28
               

               Conread position:
               157-388
               

               Cow position:
               chr5:55989733-55989500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               43, 135
               

               Conread position:
               157-398
               

               Cow position:
               chr5:28224440-28224204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 123
               

               Conread position:
               157-398
               

               Cow position:
               chr5:38683344-38683105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               43, 132
               

               Conread position:
               157-398
               

               Cow position:
               chr5:52645093-52645331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               111, 80
               

               Conread position:
               157-399
               

               Cow position:
               chr5:4617353-4617123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               219, 45
               

               Conread position:
               157-406
               

               Cow position:
               chr5:4218856-4218619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               192
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               219, 15
               

               Conread position:
               157-407
               

               Cow position:
               chr5:17087037-17087293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               157-407
               

               Cow position:
               chr5:26377684-26377927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 16
               

               Conread position:
               157-407
               

               Cow position:
               chr5:26790469-26790707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               73, 24
               

               Conread position:
               157-407
               

               Cow position:
               chr5:55176876-55176629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 80
               

               Conread position:
               157-413
               

               Cow position:
               chr5:50950540-50950284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 80
               

               Conread position:
               158-276
               

               Cow position:
               chr5:54767924-54768042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               158-332
               

               Cow position:
               chr5:30561706-30561535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               89, 37
               

               Conread position:
               158-375
               

               Cow position:
               chr5:46122366-46122576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               158-386
               

               Cow position:
               chr5:11668199-11668417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               28, 103
               

               Conread position:
               158-386
               

               Cow position:
               chr5:30638877-30639089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               218, 27
               

               Conread position:
               158-388
               

               Cow position:
               chr5:71505109-71504889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               158-398
               

               Cow position:
               chr5:56467685-56467453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               72, 100
               

               Conread position:
               158-404
               

               Cow position:
               chr5:16668546-16668318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               221, 19
               

               Conread position:
               158-407
               

               Cow position:
               chr5:55068691-55068458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               131, 44
               

               Conread position:
               158-413
               

               Cow position:
               chr5:6528661-6528411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               16, 39
               

               Conread position:
               158-413
               

               Cow position:
               chr5:12873729-12873479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               12, 82
               

               Conread position:
               159-383
               

               Cow position:
               chr5:6839096-6839315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               216, 13
               

               Conread position:
               159-398
               

               Cow position:
               chr5:33080808-33081041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               207, 33
               

               Conread position:
               159-407
               

               Cow position:
               chr5:23856178-23856426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               72, 27
               

               Conread position:
               159-407
               

               Cow position:
               chr5:29903534-29903785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               68, 122
               

               Conread position:
               159-407
               

               Cow position:
               chr5:62826770-62827018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 78
               

               Conread position:
               159-407
               

               Cow position:
               chr5:66257622-66257382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 53
               

               Conread position:
               159-408
               

               Cow position:
               chr5:2288564-2288823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               85, 136
               

               Conread position:
               159-408
               

               Cow position:
               chr5:37190111-37190357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 95
               

               Conread position:
               159-408
               

               Cow position:
               chr5:39299513-39299264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               218, 18
               

               Conread position:
               159-408
               

               Cow position:
               chr5:75244303-75244550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               217, 113
               

               Conread position:
               159-413
               

               Cow position:
               chr5:43858451-43858697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 25
               

               Conread position:
               160-276
               

               Cow position:
               chr5:41486756-41486873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               160-347
               

               Cow position:
               chr5:1027708-1027891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               160-361
               

               Cow position:
               chr5:45804042-45803847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               160-361
               

               Cow position:
               chr5:71158278-71158477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               74, 61
               

               Conread position:
               160-367
               

               Cow position:
               chr5:40152461-40152256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               78, 107
               

               Conread position:
               160-375
               

               Cow position:
               chr5:40595025-40595229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               160-380
               

               Cow position:
               chr5:72042206-72041990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               63, 70
               

               Conread position:
               160-388
               

               Cow position:
               chr5:10789694-10789918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               160-388
               

               Cow position:
               chr5:40711454-40711684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               38, 93
               

               Conread position:
               160-389
               

               Cow position:
               chr5:29505092-29504870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 55
               

               Conread position:
               160-389
               

               Cow position:
               chr5:56753711-56753485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               63, 56
               

               Conread position:
               160-398
               

               Cow position:
               chr5:19470206-19470434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               215, 44
               

               Conread position:
               160-398
               

               Cow position:
               chr5:27007880-27007645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               217, 24
               

               Conread position:
               160-398
               

               Cow position:
               chr5:46509884-46510119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               194, 64
               

               Conread position:
               160-398
               

               Cow position:
               chr5:59443269-59443502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 33
               

               Conread position:
               160-406
               

               Cow position:
               chr5:43329710-43329955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               64, 47
               

               Conread position:
               160-407
               

               Cow position:
               chr5:4631103-4630867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               216, 52
               

               Conread position:
               160-407
               

               Cow position:
               chr5:14154133-14153879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               25, 70
               

               Conread position:
               160-407
               

               Cow position:
               chr5:20974461-20974709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               64, 107
               

               Conread position:
               160-407
               

               Cow position:
               chr5:46294681-46294930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               219, 70
               

               Conread position:
               160-407
               

               Cow position:
               chr5:48829140-48828884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               74, 32
               

               Conread position:
               160-408
               

               Cow position:
               chr5:31481129-31480889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               195, 41
               

               Conread position:
               160-408
               

               Cow position:
               chr5:44583145-44583382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               216, 68
               

               Conread position:
               160-413
               

               Cow position:
               chr5:4506971-4507230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               160-413
               

               Cow position:
               chr5:12351807-12352051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               217, 36
               

               Conread position:
               160-413
               

               Cow position:
               chr5:26097278-26097028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               214, 36
               

               Conread position:
               161-288
               

               Cow position:
               chr5:50972512-50972386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               77, 12
               

               Conread position:
               161-335
               

               Cow position:
               chr5:52040333-52040507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               69, 96
               

               Conread position:
               161-335
               

               Cow position:
               chr5:74610710-74610879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               73, 44
               

               Conread position:
               161-384
               

               Cow position:
               chr5:20128036-20127817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 33
               

               Conread position:
               161-391
               

               Cow position:
               chr5:58229687-58229459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               71, 126
               

               Conread position:
               161-407
               

               Cow position:
               chr5:14538676-14538912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               58, 67
               

               Conread position:
               161-407
               

               Cow position:
               chr5:60952637-60952399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               215, 40
               

               Conread position:
               161-413
               

               Cow position:
               chr5:65601439-65601194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 19
               

               Conread position:
               161-488
               

               Cow position:
               chr5:4952742-4952413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               215, 113
               

               Conread position:
               162-388
               

               Cow position:
               chr5:26046316-26046093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               8, 16
               

               Conread position:
               162-389
               

               Cow position:
               chr5:54713750-54713980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               76, 97
               

               Conread position:
               162-398
               

               Cow position:
               chr5:22565617-22565386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               65, 40
               

               Conread position:
               162-399
               

               Cow position:
               chr5:22934471-22934708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               162-404
               

               Cow position:
               chr5:63388775-63388538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               212, 58
               

               Conread position:
               162-406
               

               Cow position:
               chr5:59876751-59877000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               95, 194
               

               Conread position:
               162-407
               

               Cow position:
               chr5:72314471-72314720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               191, 66
               

               Conread position:
               162-413
               

               Cow position:
               chr5:3204818-3204569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               66, 131
               

               Conread position:
               162-413
               

               Cow position:
               chr5:27403255-27403509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 240
               

               Conread position:
               163-342
               

               Cow position:
               chr5:1678375-1678204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 102
               

               Conread position:
               163-371
               

               Cow position:
               chr5:9024286-9024482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               163-375
               

               Cow position:
               chr5:28926201-28926412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 181
               

               Conread position:
               163-375
               

               Cow position:
               chr5:36868710-36868518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               163-385
               

               Cow position:
               chr5:41129732-41129527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               213, 22
               

               Conread position:
               163-407
               

               Cow position:
               chr5:26173378-26173629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               93, 21
               

               Conread position:
               163-407
               

               Cow position:
               chr5:43436932-43437180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               163-407
               

               Cow position:
               chr5:56233848-56234091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               214, 130
               

               Conread position:
               163-413
               

               Cow position:
               chr5:58005231-58004975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 51
               

               Conread position:
               164-311
               

               Cow position:
               chr5:46512784-46512930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               164-316
               

               Cow position:
               chr5:61875205-61875346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               164-319
               

               Cow position:
               chr5:64697764-64697609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 38
               

               Conread position:
               164-329
               

               Cow position:
               chr5:71723048-71722879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               164-335
               

               Cow position:
               chr5:4322388-4322223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               164-380
               

               Cow position:
               chr5:68872173-68871959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               70, 51
               

               Conread position:
               164-388
               

               Cow position:
               chr5:2332531-2332755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               212, 90
               

               Conread position:
               164-398
               

               Cow position:
               chr5:33414430-33414656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               69, 110
               

               Conread position:
               164-399
               

               Cow position:
               chr5:26370674-26370455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               70, 34
               

               Conread position:
               164-406
               

               Cow position:
               chr5:50533408-50533643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               193, 73
               

               Conread position:
               164-407
               

               Cow position:
               chr5:5938304-5938061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 38
               

               Conread position:
               164-408
               

               Cow position:
               chr5:20554768-20555013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 50
               

               Conread position:
               164-408
               

               Cow position:
               chr5:33661836-33661590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 50
               

               Conread position:
               164-408
               

               Cow position:
               chr5:34505950-34506190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 20
               

               Conread position:
               164-413
               

               Cow position:
               chr5:27179639-27179388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               70, 38
               

               Conread position:
               164-413
               

               Cow position:
               chr5:28330354-28330598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 116
               

               Conread position:
               164-413
               

               Cow position:
               chr5:40889306-40889552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 34
               

               Conread position:
               164-413
               

               Cow position:
               chr5:47704147-47704404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               164-413
               

               Cow position:
               chr5:50729473-50729230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 19
               

               Conread position:
               164-420
               

               Cow position:
               chr5:18702230-18702491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 34
               

               Conread position:
               165-360
               

               Cow position:
               chr5:48154494-48154685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               42, 116
               

               Conread position:
               165-376
               

               Cow position:
               chr5:57469482-57469692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               165-407
               

               Cow position:
               chr5:40865007-40864761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               209, 0
               

               Conread position:
               165-407
               

               Cow position:
               chr5:62428247-62428002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               165-413
               

               Cow position:
               chr5:19278722-19278958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               215, 72
               

               Conread position:
               166-316
               

               Cow position:
               chr5:31945550-31945402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               166-316
               

               Cow position:
               chr5:38838076-38838226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               166-316
               

               Cow position:
               chr5:60708476-60708326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               166-370
               

               Cow position:
               chr5:24103056-24102851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               166-375
               

               Cow position:
               chr5:4063167-4063373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               166-375
               

               Cow position:
               chr5:27353257-27353463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               166-380
               

               Cow position:
               chr5:63235875-63236091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               166-384
               

               Cow position:
               chr5:18902840-18902623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               210, 177
               

               Conread position:
               166-385
               

               Cow position:
               chr5:26368009-26367792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               90, 123
               

               Conread position:
               166-386
               

               Cow position:
               chr5:5714855-5715076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               167, 179
               

               Conread position:
               166-398
               

               Cow position:
               chr5:1337921-1338154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-398
               

               Cow position:
               chr5:23605206-23604974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               208, 113
               

               Conread position:
               166-398
               

               Cow position:
               chr5:26505424-26505657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-398
               

               Cow position:
               chr5:41547027-41547258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               211, 133
               

               Conread position:
               166-398
               

               Cow position:
               chr5:43985082-43984856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               210, 42
               

               Conread position:
               166-398
               

               Cow position:
               chr5:57987485-57987252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-398
               

               Cow position:
               chr5:61656582-61656355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               68, 48
               

               Conread position:
               166-398
               

               Cow position:
               chr5:75754116-75754349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               209, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr5:5107234-5106996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr5:10284130-10283894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr5:12727034-12726800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr5:13630919-13630685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr5:22108349-22108582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               208, 59
               

               Conread position:
               166-399
               

               Cow position:
               chr5:27046914-27046680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr5:27500970-27501204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr5:31285864-31285630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr5:35174322-35174556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               40, 49
               

               Conread position:
               166-399
               

               Cow position:
               chr5:37271633-37271399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr5:37430509-37430743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr5:38608149-38608383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               209, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr5:41371316-41371082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr5:46845066-46845300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr5:46879269-46879035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr5:49535272-49535038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr5:53201138-53201372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr5:54929252-54929486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-399
               

               Cow position:
               chr5:64062334-64062100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-402
               

               Cow position:
               chr5:20270762-20270525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-402
               

               Cow position:
               chr5:27183662-27183425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-402
               

               Cow position:
               chr5:49240239-49240002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-406
               

               Cow position:
               chr5:3696945-3696701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-406
               

               Cow position:
               chr5:47559559-47559798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               210, 62
               

               Conread position:
               166-406
               

               Cow position:
               chr5:48972574-48972329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 93
               

               Conread position:
               166-406
               

               Cow position:
               chr5:59339800-59339556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-406
               

               Cow position:
               chr5:59439146-59438913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               210, 7
               

               Conread position:
               166-407
               

               Cow position:
               chr5:248310-248065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:261846-262091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:279173-279419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:366003-366248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:410713-410958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:446501-446256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:472643-472888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:709146-709389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               97, 101
               

               Conread position:
               166-407
               

               Cow position:
               chr5:1128554-1128799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:1164005-1163760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:2278769-2279014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:2395578-2395334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               210, 32
               

               Conread position:
               166-407
               

               Cow position:
               chr5:2918461-2918217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               211, 203
               

               Conread position:
               166-407
               

               Cow position:
               chr5:3228756-3229001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:3545300-3545057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               210, 19
               

               Conread position:
               166-407
               

               Cow position:
               chr5:4538181-4537936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:4715755-4716000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 60
               

               Conread position:
               166-407
               

               Cow position:
               chr5:5235279-5235525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 52
               

               Conread position:
               166-407
               

               Cow position:
               chr5:5923976-5924221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:6693999-6694244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:6734782-6735027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:7397523-7397283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               210, 109
               

               Conread position:
               166-407
               

               Cow position:
               chr5:8179160-8178919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               230, 200
               

               Conread position:
               166-407
               

               Cow position:
               chr5:9099456-9099698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               210, 28
               

               Conread position:
               166-407
               

               Cow position:
               chr5:10250266-10250511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:10524823-10525068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:10771826-10772068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 111
               

               Conread position:
               166-407
               

               Cow position:
               chr5:10923161-10922920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               210, 99
               

               Conread position:
               166-407
               

               Cow position:
               chr5:11130006-11129761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:11988475-11988720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:12146675-12146430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               211, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:12212191-12212436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:12324567-12324812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:13127521-13127766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:13271520-13271275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:13774142-13774387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               108, 117
               

               Conread position:
               166-407
               

               Cow position:
               chr5:14279152-14278907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:15529879-15530121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               210, 93
               

               Conread position:
               166-407
               

               Cow position:
               chr5:18071912-18072155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               210, 27
               

               Conread position:
               166-407
               

               Cow position:
               chr5:18287647-18287403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               210, 40
               

               Conread position:
               166-407
               

               Cow position:
               chr5:18514000-18514245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:18557421-18557656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               210, 93
               

               Conread position:
               166-407
               

               Cow position:
               chr5:20410656-20410901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               209, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:20971098-20971341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 21
               

               Conread position:
               166-407
               

               Cow position:
               chr5:23397861-23397617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               230, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:23881324-23881569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:26074687-26074932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:28013864-28013619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:29224025-29223780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:29240451-29240206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:29632977-29633222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:29893969-29893724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:30158404-30158159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:30274083-30274328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:31053403-31053158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 153
               

               Conread position:
               166-407
               

               Cow position:
               chr5:31262033-31261788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:31682241-31681998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               208, 133
               

               Conread position:
               166-407
               

               Cow position:
               chr5:31740228-31740473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:33180885-33180643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               210, 23
               

               Conread position:
               166-407
               

               Cow position:
               chr5:33869836-33870081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:34612779-34612535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               210, 87
               

               Conread position:
               166-407
               

               Cow position:
               chr5:35281074-35280829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:35543666-35543421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:37084678-37084435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               208, 27
               

               Conread position:
               166-407
               

               Cow position:
               chr5:37654262-37654017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               79, 135
               

               Conread position:
               166-407
               

               Cow position:
               chr5:37782132-37782373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               208, 233
               

               Conread position:
               166-407
               

               Cow position:
               chr5:37801708-37801463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:39361124-39361369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:40129816-40130061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:41068003-41067760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               208, 148
               

               Conread position:
               166-407
               

               Cow position:
               chr5:44532356-44532601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:45837826-45837581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:45881205-45881450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               90, 27
               

               Conread position:
               166-407
               

               Cow position:
               chr5:45965672-45965915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               210, 131
               

               Conread position:
               166-407
               

               Cow position:
               chr5:45999043-45999284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               210, 160
               

               Conread position:
               166-407
               

               Cow position:
               chr5:46668072-46667831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               210, 200
               

               Conread position:
               166-407
               

               Cow position:
               chr5:46732355-46732600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               211, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:47343879-47343636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               210, 36
               

               Conread position:
               166-407
               

               Cow position:
               chr5:47750929-47750687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:48227800-48227555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:48497270-48497026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               211, 197
               

               Conread position:
               166-407
               

               Cow position:
               chr5:49116354-49116599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:49286481-49286724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               210, 112
               

               Conread position:
               166-407
               

               Cow position:
               chr5:49969971-49970216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:50582309-50582556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:50674696-50674941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:50839827-50839585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               210, 97
               

               Conread position:
               166-407
               

               Cow position:
               chr5:51915594-51915349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:52226264-52226509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:52822202-52822447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:53184493-53184737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               210, 188
               

               Conread position:
               166-407
               

               Cow position:
               chr5:54360191-54360436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:54678577-54678822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:54926920-54927165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:55430617-55430372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:55632071-55631826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:55723535-55723291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               230, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:58330038-58329793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 44
               

               Conread position:
               166-407
               

               Cow position:
               chr5:68272842-68273087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:70290458-70290222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               211, 100
               

               Conread position:
               166-407
               

               Cow position:
               chr5:73139591-73139836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr5:73484605-73484850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-408
               

               Cow position:
               chr5:14542471-14542715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               233, 214
               

               Conread position:
               166-410
               

               Cow position:
               chr5:34709774-34709526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               166-410
               

               Cow position:
               chr5:58321721-58321977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               205, 0
               

               Conread position:
               166-413
               

               Cow position:
               chr5:13691591-13691845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               166-413
               

               Cow position:
               chr5:43990375-43990124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               71, 79
               

               Conread position:
               166-413
               

               Cow position:
               chr5:63566289-63566037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               166-414
               

               Cow position:
               chr5:11639500-11639250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               210, 73
               

               Conread position:
               166-414
               

               Cow position:
               chr5:33792598-33792359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               210, 108
               

               Conread position:
               166-419
               

               Cow position:
               chr5:27548515-27548766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               210, 80
               

               Conread position:
               166-421
               

               Cow position:
               chr5:46653882-46653628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               210, 109
               

               Conread position:
               167-316
               

               Cow position:
               chr5:69414150-69414001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               167-401
               

               Cow position:
               chr5:62397337-62397101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               167-407
               

               Cow position:
               chr5:14141667-14141424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               97, 85
               

               Conread position:
               167-413
               

               Cow position:
               chr5:54869395-54869148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               207, 107
               

               Conread position:
               168-383
               

               Cow position:
               chr5:54064758-54064543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               15, 115
               

               Conread position:
               168-403
               

               Cow position:
               chr5:49884195-49884426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               208, 108
               

               Conread position:
               168-407
               

               Cow position:
               chr5:58769870-58770113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               169-316
               

               Cow position:
               chr5:44028769-44028914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 40
               

               Conread position:
               169-398
               

               Cow position:
               chr5:63103890-63103660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               169-407
               

               Cow position:
               chr5:7176300-7176060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               207, 130
               

               Conread position:
               169-407
               

               Cow position:
               chr5:7497981-7498223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               205, 0
               

               Conread position:
               170-399
               

               Cow position:
               chr5:72857880-72857650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               170-406
               

               Cow position:
               chr5:46103967-46104202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               206, 69
               

               Conread position:
               170-407
               

               Cow position:
               chr5:35826576-35826330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 58
               

               Conread position:
               170-407
               

               Cow position:
               chr5:48800031-48799796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               206, 54
               

               Conread position:
               171-325
               

               Cow position:
               chr5:6286452-6286604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               171-359
               

               Cow position:
               chr5:6572724-6572540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               172-392
               

               Cow position:
               chr5:46322839-46323057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 75
               

               Conread position:
               172-407
               

               Cow position:
               chr5:6535982-6536222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               172-407
               

               Cow position:
               chr5:42665519-42665750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               205, 115
               

               Conread position:
               172-408
               

               Cow position:
               chr5:63840173-63840410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               204, 77
               

               Conread position:
               173-324
               

               Cow position:
               chr5:30178537-30178687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 101
               

               Conread position:
               173-331
               

               Cow position:
               chr5:57591663-57591507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               61, 41
               

               Conread position:
               173-340
               

               Cow position:
               chr5:50870516-50870349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               173-370
               

               Cow position:
               chr5:50425502-50425700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               26, 108
               

               Conread position:
               173-370
               

               Cow position:
               chr5:54111892-54111696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               44, 65
               

               Conread position:
               173-375
               

               Cow position:
               chr5:16938037-16938235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               67, 102
               

               Conread position:
               173-388
               

               Cow position:
               chr5:28230124-28229916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               201, 56
               

               Conread position:
               173-389
               

               Cow position:
               chr5:48178707-48178918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               203, 17
               

               Conread position:
               173-398
               

               Cow position:
               chr5:37366871-37366639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               195, 64
               

               Conread position:
               173-414
               

               Cow position:
               chr5:44054065-44054305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 64
               

               Conread position:
               174-353
               

               Cow position:
               chr5:75828769-75828940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               174-407
               

               Cow position:
               chr5:39675483-39675706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               202, 11
               

               Conread position:
               174-414
               

               Cow position:
               chr5:63917441-63917677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 53
               

               Conread position:
               175-316
               

               Cow position:
               chr5:35231513-35231371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               175-316
               

               Cow position:
               chr5:45025950-45026086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               175-338
               

               Cow position:
               chr5:57576184-57576023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               175-346
               

               Cow position:
               chr5:57575737-57575567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               175-358
               

               Cow position:
               chr5:14513086-14512902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               42, 166
               

               Conread position:
               175-398
               

               Cow position:
               chr5:62173641-62173422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               199, 85
               

               Conread position:
               175-406
               

               Cow position:
               chr5:2427754-2427989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               175-407
               

               Cow position:
               chr5:9868149-9867915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               175-407
               

               Cow position:
               chr5:34682367-34682603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               175-407
               

               Cow position:
               chr5:42508439-42508203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               175-407
               

               Cow position:
               chr5:62678630-62678395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               201, 174
               

               Conread position:
               175-407
               

               Cow position:
               chr5:64139534-64139300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               202, 62
               

               Conread position:
               175-407
               

               Cow position:
               chr5:67913752-67913517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               170, 158
               

               Conread position:
               175-407
               

               Cow position:
               chr5:75725583-75725817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               175-410
               

               Cow position:
               chr5:69099500-69099260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               177, 53
               

               Conread position:
               175-413
               

               Cow position:
               chr5:34916107-34915873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               202, 53
               

               Conread position:
               175-425
               

               Cow position:
               chr5:64176149-64176401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               167, 62
               

               Conread position:
               176-407
               

               Cow position:
               chr5:16084827-16085061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               36, 198
               

               Conread position:
               177-360
               

               Cow position:
               chr5:57706886-57706703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               177-388
               

               Cow position:
               chr5:37814588-37814382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               199, 47
               

               Conread position:
               177-407
               

               Cow position:
               chr5:29969604-29969370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               177-407
               

               Cow position:
               chr5:70101841-70102068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               61, 24
               

               Conread position:
               179-325
               

               Cow position:
               chr5:28957646-28957794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               179-387
               

               Cow position:
               chr5:12563042-12563246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               135, 22
               

               Conread position:
               180-327
               

               Cow position:
               chr5:59631446-59631301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 18
               

               Conread position:
               180-410
               

               Cow position:
               chr5:15598270-15598500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 57
               

               Conread position:
               182-388
               

               Cow position:
               chr5:24642765-24642963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               197, 48
               

               Conread position:
               182-413
               

               Cow position:
               chr5:15462676-15462456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               54, 101
               

               Conread position:
               183-299
               

               Cow position:
               chr5:61049324-61049204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               183-386
               

               Cow position:
               chr5:13537111-13536918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               193, 19
               

               Conread position:
               183-398
               

               Cow position:
               chr5:23140615-23140829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               51, 75
               

               Conread position:
               183-406
               

               Cow position:
               chr5:20407707-20407925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               35, 24
               

               Conread position:
               183-407
               

               Cow position:
               chr5:7193390-7193169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               183-407
               

               Cow position:
               chr5:56443246-56443018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               61, 78
               

               Conread position:
               183-414
               

               Cow position:
               chr5:32153356-32153586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 26
               

               Conread position:
               185-361
               

               Cow position:
               chr5:35969499-35969329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               185-378
               

               Cow position:
               chr5:63456613-63456804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               185-388
               

               Cow position:
               chr5:59873446-59873647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               190, 93
               

               Conread position:
               185-397
               

               Cow position:
               chr5:28302783-28302990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               53, 25
               

               Conread position:
               185-398
               

               Cow position:
               chr5:50600014-50599815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               37, 24
               

               Conread position:
               185-407
               

               Cow position:
               chr5:12322843-12323057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               185-413
               

               Cow position:
               chr5:66339037-66338818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               191, 54
               

               Conread position:
               186-293
               

               Cow position:
               chr5:54750794-54750687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               186-329
               

               Cow position:
               chr5:66281369-66281230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 52
               

               Conread position:
               186-372
               

               Cow position:
               chr5:14415736-14415549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               152
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               82, 122
               

               Conread position:
               186-375
               

               Cow position:
               chr5:69516745-69516934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               186-383
               

               Cow position:
               chr5:56201159-56201357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               29, 18
               

               Conread position:
               186-386
               

               Cow position:
               chr5:694540-694348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               190, 27
               

               Conread position:
               186-399
               

               Cow position:
               chr5:58202519-58202305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               186-399
               

               Cow position:
               chr5:58516142-58516356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               186-399
               

               Cow position:
               chr5:76098285-76098499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               188, 0
               

               Conread position:
               186-405
               

               Cow position:
               chr5:35724503-35724722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               188, 30
               

               Conread position:
               186-405
               

               Cow position:
               chr5:43457559-43457774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               190, 51
               

               Conread position:
               186-406
               

               Cow position:
               chr5:22072050-22071824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               13, 91
               

               Conread position:
               186-407
               

               Cow position:
               chr5:4962409-4962630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               190, 92
               

               Conread position:
               186-407
               

               Cow position:
               chr5:5685098-5685322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               188, 148
               

               Conread position:
               186-407
               

               Cow position:
               chr5:12134568-12134343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               72, 76
               

               Conread position:
               186-407
               

               Cow position:
               chr5:21190204-21189979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               186-407
               

               Cow position:
               chr5:24085719-24085940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               188, 117
               

               Conread position:
               186-407
               

               Cow position:
               chr5:34249579-34249354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 40
               

               Conread position:
               186-407
               

               Cow position:
               chr5:46721441-46721216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               151, 159
               

               Conread position:
               186-407
               

               Cow position:
               chr5:47888752-47888978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               186-407
               

               Cow position:
               chr5:53055606-53055816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               190, 15
               

               Conread position:
               186-407
               

               Cow position:
               chr5:59269707-59269480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               19, 176
               

               Conread position:
               186-411
               

               Cow position:
               chr5:34509200-34509429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               159, 143
               

               Conread position:
               186-413
               

               Cow position:
               chr5:35989278-35989047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               5, 174
               

               Conread position:
               186-413
               

               Cow position:
               chr5:38853323-38853090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               186-413
               

               Cow position:
               chr5:59759342-59759124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 28
               

               Conread position:
               187-390
               

               Cow position:
               chr5:67243883-67243681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               173, 15
               

               Conread position:
               188-313
               

               Cow position:
               chr5:65967773-65967897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               188-374
               

               Cow position:
               chr5:7723627-7723446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 91
               

               Conread position:
               188-389
               

               Cow position:
               chr5:69337784-69337590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 14
               

               Conread position:
               188-414
               

               Cow position:
               chr5:29366966-29366737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               188, 132
               

               Conread position:
               190-369
               

               Cow position:
               chr5:66280838-66281014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               27, 48
               

               Conread position:
               192-324
               

               Cow position:
               chr5:23914044-23913910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               193-360
               

               Cow position:
               chr5:68265011-68265176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               43, 14
               

               Conread position:
               193-388
               

               Cow position:
               chr5:2851268-2851073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               41, 28
               

               Conread position:
               193-388
               

               Cow position:
               chr5:25225701-25225890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               193-388
               

               Cow position:
               chr5:33537839-33537653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               193-389
               

               Cow position:
               chr5:9498339-9498147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               193-389
               

               Cow position:
               chr5:14703016-14703210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               193-407
               

               Cow position:
               chr5:60210177-60210402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               37, 184
               

               Conread position:
               193-408
               

               Cow position:
               chr5:54875729-54875941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 90
               

               Conread position:
               194-356
               

               Cow position:
               chr5:29756288-29756129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               194-374
               

               Cow position:
               chr5:26541241-26541070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               194-375
               

               Cow position:
               chr5:54530932-54530755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               194-378
               

               Cow position:
               chr5:51071229-51071044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 7
               

               Conread position:
               194-407
               

               Cow position:
               chr5:8166033-8165817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               181, 160
               

               Conread position:
               194-407
               

               Cow position:
               chr5:15112276-15112493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               194-407
               

               Cow position:
               chr5:19299826-19300043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               194-407
               

               Cow position:
               chr5:51747193-51746978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               182, 30
               

               Conread position:
               194-407
               

               Cow position:
               chr5:58099734-58099951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               194-414
               

               Cow position:
               chr5:12672081-12672292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               204, 43
               

               Conread position:
               195-375
               

               Cow position:
               chr5:66297186-66297011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               195-407
               

               Cow position:
               chr5:52905545-52905751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               181, 103
               

               Conread position:
               196-386
               

               Cow position:
               chr5:32087767-32087960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               196-388
               

               Cow position:
               chr5:6033187-6032997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               153
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               179, 42
               

               Conread position:
               196-401
               

               Cow position:
               chr5:15363841-15363636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               178, 41
               

               Conread position:
               198-352
               

               Cow position:
               chr5:24837001-24837150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               198-407
               

               Cow position:
               chr5:14635608-14635817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               60, 81
               

               Conread position:
               198-407
               

               Cow position:
               chr5:29741586-29741796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               179, 0
               

               Conread position:
               198-407
               

               Cow position:
               chr5:48718768-48718561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               178, 54
               

               Conread position:
               198-407
               

               Cow position:
               chr5:60896895-60897108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               176, 0
               

               Conread position:
               198-413
               

               Cow position:
               chr5:17386643-17386863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               198-421
               

               Cow position:
               chr5:25926458-25926686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 221
               

               Conread position:
               200-407
               

               Cow position:
               chr5:39447587-39447798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               64, 38
               

               Conread position:
               200-407
               

               Cow position:
               chr5:50645505-50645715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               37, 9
               

               Conread position:
               200-407
               

               Cow position:
               chr5:62437095-62436885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               90, 9
               

               Conread position:
               204-399
               

               Cow position:
               chr5:41981336-41981149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               172, 72
               

               Conread position:
               206-407
               

               Cow position:
               chr5:17982449-17982651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               171, 39
               

               Conread position:
               206-410
               

               Cow position:
               chr5:53736123-53735921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 50
               

               Conread position:
               212-388
               

               Cow position:
               chr5:34923181-34923348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               213-398
               

               Cow position:
               chr5:37757874-37758055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               163, 12
               

               Conread position:
               214-352
               

               Cow position:
               chr5:50943221-50943359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               134, 23
               

               Conread position:
               214-376
               

               Cow position:
               chr5:15412628-15412464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               214-405
               

               Cow position:
               chr5:61455688-61455499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               214-407
               

               Cow position:
               chr5:14629975-14630171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               98, 23
               

               Conread position:
               214-407
               

               Cow position:
               chr5:70035328-70035136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               162, 60
               

               Conread position:
               215-408
               

               Cow position:
               chr5:58548441-58548632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               159, 15
               

               Conread position:
               216-389
               

               Cow position:
               chr5:70608927-70608755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               105, 21
               

               Conread position:
               216-398
               

               Cow position:
               chr5:54427673-54427850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               160, 11
               

               Conread position:
               216-398
               

               Cow position:
               chr5:55685061-55684877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 46
               

               Conread position:
               216-407
               

               Cow position:
               chr5:45191860-45192056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               216-408
               

               Cow position:
               chr5:46234874-46235070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               216-418
               

               Cow position:
               chr5:45283686-45283890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               47, 64
               

               Conread position:
               217-370
               

               Cow position:
               chr5:36479611-36479763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               17, 128
               

               Conread position:
               217-372
               

               Cow position:
               chr5:55985618-55985774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               22, 107
               

               Conread position:
               217-388
               

               Cow position:
               chr5:41598774-41598938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               217-389
               

               Cow position:
               chr5:27306246-27306076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               217-405
               

               Cow position:
               chr5:70050681-70050493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               159, 20
               

               Conread position:
               217-413
               

               Cow position:
               chr5:53825440-53825255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               160, 60
               

               Conread position:
               217-421
               

               Cow position:
               chr5:48238162-48238364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               160, 72
               

               Conread position:
               218-380
               

               Cow position:
               chr5:57626731-57626576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               158, 19
               

               Conread position:
               218-389
               

               Cow position:
               chr5:25935877-25935712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               159, 19
               

               Conread position:
               219-398
               

               Cow position:
               chr5:19751769-19751603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               221-388
               

               Cow position:
               chr5:51360875-51360704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               221-405
               

               Cow position:
               chr5:13044484-13044667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr5:15089115-15088926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               10, 134
               

               Conread position:
               221-407
               

               Cow position:
               chr5:60948142-60947955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               155, 51
               

               Conread position:
               221-408
               

               Cow position:
               chr5:26133149-26133338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               9, 59
               

               Conread position:
               222-385
               

               Cow position:
               chr5:18127569-18127405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               137, 16
               

               Conread position:
               222-388
               

               Cow position:
               chr5:42045129-42044964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               154, 109
               

               Conread position:
               223-407
               

               Cow position:
               chr5:67212303-67212118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               149
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               223-413
               

               Cow position:
               chr5:73070365-73070178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               153, 36
               

               Conread position:
               225-398
               

               Cow position:
               chr5:37090852-37091026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               225-399
               

               Cow position:
               chr5:36369044-36369219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               225-407
               

               Cow position:
               chr5:12468230-12468412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               151, 75
               

               Conread position:
               225-408
               

               Cow position:
               chr5:350909-351096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               225-408
               

               Cow position:
               chr5:57787292-57787116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               152, 45
               

               Conread position:
               225-409
               

               Cow position:
               chr5:57494491-57494680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               226-398
               

               Cow position:
               chr5:49220550-49220723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               227-407
               

               Cow position:
               chr5:52289694-52289509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               228-407
               

               Cow position:
               chr5:44703259-44703079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               146, 11
               

               Conread position:
               228-407
               

               Cow position:
               chr5:52269269-52269449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               148, 54
               

               Conread position:
               229-398
               

               Cow position:
               chr5:56648215-56648384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               147, 69
               

               Conread position:
               229-407
               

               Cow position:
               chr5:51761251-51761433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               24, 92
               

               Conread position:
               230-375
               

               Cow position:
               chr5:13941121-13941267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               230-382
               

               Cow position:
               chr5:50923971-50923817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 104
               

               Conread position:
               230-389
               

               Cow position:
               chr5:53701546-53701705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               60, 54
               

               Conread position:
               230-395
               

               Cow position:
               chr5:26335202-26335367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               120, 47
               

               Conread position:
               230-398
               

               Cow position:
               chr5:68460827-68460988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               146, 33
               

               Conread position:
               230-406
               

               Cow position:
               chr5:50573671-50573495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               144, 33
               

               Conread position:
               230-407
               

               Cow position:
               chr5:41935883-41936059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               144, 52
               

               Conread position:
               230-407
               

               Cow position:
               chr5:63967733-63967906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               150
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               146, 56
               

               Conread position:
               230-413
               

               Cow position:
               chr5:46709098-46708911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               146, 100
               

               Conread position:
               230-415
               

               Cow position:
               chr5:57613138-57613323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               146, 129
               

               Conread position:
               230-432
               

               Cow position:
               chr5:25937929-25937723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               231-375
               

               Cow position:
               chr5:9499176-9499320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-389
               

               Cow position:
               chr5:29560324-29560167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               145, 61
               

               Conread position:
               231-396
               

               Cow position:
               chr5:18276391-18276229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               145, 47
               

               Conread position:
               231-398
               

               Cow position:
               chr5:46754644-46754476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-399
               

               Cow position:
               chr5:47589654-47589823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr5:66119336-66119518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr5:44369811-44369631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr5:46023266-46023441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               145, 34
               

               Conread position:
               231-407
               

               Cow position:
               chr5:46080344-46080519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               145, 34
               

               Conread position:
               231-407
               

               Cow position:
               chr5:46129869-46130043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               145, 9
               

               Conread position:
               231-413
               

               Cow position:
               chr5:27011210-27011025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               153
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               146, 107
               

               Conread position:
               231-414
               

               Cow position:
               chr5:30347044-30347233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-420
               

               Cow position:
               chr5:19905360-19905550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               69, 177
               

               Conread position:
               232-364
               

               Cow position:
               chr5:59623290-59623421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               232-366
               

               Cow position:
               chr5:12803411-12803277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-375
               

               Cow position:
               chr5:28035622-28035483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               232-398
               

               Cow position:
               chr5:23666346-23666513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               142, 117
               

               Conread position:
               232-405
               

               Cow position:
               chr5:37668793-37668620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               144, 56
               

               Conread position:
               232-406
               

               Cow position:
               chr5:42096543-42096358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr5:34887951-34888117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               142, 42
               

               Conread position:
               232-407
               

               Cow position:
               chr5:68377532-68377353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               233-380
               

               Cow position:
               chr5:59450821-59450967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               143, 118
               

               Conread position:
               233-384
               

               Cow position:
               chr5:10254467-10254618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 117
               

               Conread position:
               233-384
               

               Cow position:
               chr5:68715744-68715596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               143, 46
               

               Conread position:
               233-389
               

               Cow position:
               chr5:39418874-39419025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               143, 39
               

               Conread position:
               233-395
               

               Cow position:
               chr5:24959041-24959203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               143, 39
               

               Conread position:
               233-405
               

               Cow position:
               chr5:14653598-14653772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               143, 167
               

               Conread position:
               233-407
               

               Cow position:
               chr5:19969117-19969295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr5:72045735-72045904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               143, 57
               

               Conread position:
               234-407
               

               Cow position:
               chr5:40269816-40269990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               234-414
               

               Cow position:
               chr5:72701100-72701278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               142, 28
               

               Conread position:
               235-389
               

               Cow position:
               chr5:11955572-11955726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               140, 106
               

               Conread position:
               235-399
               

               Cow position:
               chr5:31104213-31104050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               141, 29
               

               Conread position:
               236-398
               

               Cow position:
               chr5:60730198-60730035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               236-406
               

               Cow position:
               chr5:56569139-56568967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               141, 123
               

               Conread position:
               238-367
               

               Cow position:
               chr5:62378410-62378283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               238-386
               

               Cow position:
               chr5:35125923-35125777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               138, 9
               

               Conread position:
               239-366
               

               Cow position:
               chr5:29860230-29860101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               79, 118
               

               Conread position:
               241-414
               

               Cow position:
               chr5:53381485-53381308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               96, 104
               

               Conread position:
               244-407
               

               Cow position:
               chr5:51683341-51683505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               245-388
               

               Cow position:
               chr5:20454680-20454536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               246-365
               

               Cow position:
               chr5:60183423-60183308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               246-398
               

               Cow position:
               chr5:17384194-17384352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               246-407
               

               Cow position:
               chr5:60015821-60015658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               130, 106
               

               Conread position:
               247-386
               

               Cow position:
               chr5:44735028-44735167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               121, 33
               

               Conread position:
               249-389
               

               Cow position:
               chr5:35151083-35151223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               127, 115
               

               Conread position:
               256-389
               

               Cow position:
               chr5:24934098-24933965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               104, 123
               

               Conread position:
               257-398
               

               Cow position:
               chr5:37255465-37255607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               258-407
               

               Cow position:
               chr5:12719144-12718990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               259-407
               

               Cow position:
               chr5:54126964-54126817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               117, 40
               

               Conread position:
               260-421
               

               Cow position:
               chr5:59873644-59873800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               116, 54
               

               Conread position:
               261-388
               

               Cow position:
               chr5:52162484-52162358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               115, 28
               

               Conread position:
               264-388
               

               Cow position:
               chr5:57890379-57890258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               112, 26
               

               Conread position:
               265-407
               

               Cow position:
               chr5:26376447-26376305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               89, 21
               

               Conread position:
               266-389
               

               Cow position:
               chr5:35683953-35683829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               266-407
               

               Cow position:
               chr5:765600-765459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               110, 34
               

               Conread position:
               266-407
               

               Cow position:
               chr5:72902440-72902295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               267-407
               

               Cow position:
               chr5:48765511-48765370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               269-407
               

               Cow position:
               chr5:22312341-22312204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               280-407
               

               Cow position:
               chr5:66366396-66366271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               97, 10
               

               Conread position:
               283-407
               

               Cow position:
               chr5:12316179-12316054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               284-398
               

               Cow position:
               chr5:24919013-24919128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               292-413
               

               Cow position:
               chr5:34192801-34192685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 0
               
Show alignments to all cow chromosomes.
Conread position:	4-132
Cow position:	chr5:51255579-51255450 (view UCSC Genome Browser custom track)
Alignm length:	130
Alignm identity:	102
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	42, 0
Conread position:	136-357
Cow position:	chr5:11427231-11427451 (view UCSC Genome Browser custom track)
Alignm length:	224
Alignm identity:	173
Alignm E-value:	9.80909e-45
Alignm gaps (pig, cow):	97, 24
Conread position:	138-386
Cow position:	chr5:75436883-75437136 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	195
Alignm E-value:	0
Alignm gaps (pig, cow):	100, 11
Conread position:	138-398
Cow position:	chr5:38830988-38831246 (view UCSC Genome Browser custom track)
Alignm length:	264
Alignm identity:	181
Alignm E-value:	3e-31
Alignm gaps (pig, cow):	22, 141
Conread position:	139-254
Cow position:	chr5:23678696-23678814 (view UCSC Genome Browser custom track)
Alignm length:	119
Alignm identity:	94
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	16, 0
Conread position:	139-268
Cow position:	chr5:60448219-60448090 (view UCSC Genome Browser custom track)
Alignm length:	131
Alignm identity:	102
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	120, 10
Conread position:	139-271
Cow position:	chr5:18289135-18289002 (view UCSC Genome Browser custom track)
Alignm length:	134
Alignm identity:	106
Alignm E-value:	6e-27
Alignm gaps (pig, cow):	16, 0
Conread position:	139-279
Cow position:	chr5:45273498-45273636 (view UCSC Genome Browser custom track)
Alignm length:	141
Alignm identity:	106
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	21, 0
Conread position:	139-281
Cow position:	chr5:7921396-7921537 (view UCSC Genome Browser custom track)
Alignm length:	143
Alignm identity:	110
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	90, 0
Conread position:	139-284
Cow position:	chr5:29097371-29097219 (view UCSC Genome Browser custom track)
Alignm length:	154
Alignm identity:	117
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	6, 25
Conread position:	139-298
Cow position:	chr5:35459291-35459445 (view UCSC Genome Browser custom track)
Alignm length:	161
Alignm identity:	120
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	8, 92
Conread position:	139-311
Cow position:	chr5:64060291-64060457 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	130
Alignm E-value:	6e-26
Alignm gaps (pig, cow):	6, 23
Conread position:	139-313
Cow position:	chr5:55955911-55955740 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	131
Alignm E-value:	9e-30
Alignm gaps (pig, cow):	91, 0
Conread position:	139-314
Cow position:	chr5:30629156-30629324 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	126
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	9, 0
Conread position:	139-316
Cow position:	chr5:41452662-41452835 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	135
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	12, 70
Conread position:	139-334
Cow position:	chr5:17644651-17644842 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	153
Alignm E-value:	8.99998e-41
Alignm gaps (pig, cow):	138, 0
Conread position:	139-341
Cow position:	chr5:74019767-74019964 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	148
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	66, 75
Conread position:	139-346
Cow position:	chr5:3668901-3668700 (view UCSC Genome Browser custom track)
Alignm length:	209
Alignm identity:	144
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	19, 45
Conread position:	139-351
Cow position:	chr5:23168823-23169022 (view UCSC Genome Browser custom track)
Alignm length:	215
Alignm identity:	154
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	12, 70
Conread position:	139-357
Cow position:	chr5:29212947-29212739 (view UCSC Genome Browser custom track)
Alignm length:	219
Alignm identity:	162
Alignm E-value:	4e-33
Alignm gaps (pig, cow):	42, 0