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Cow genome map

           
Conread name:
           
Ss1.1-rnca23b_e14.5
        

               
Conread position:
               
72-472
               

               
Cow position:
               
chr12:24211560-24211170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
242, 74
               

               
Conread position:
               
76-445
               

               
Cow position:
               
chr12:38054002-38053625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
87-503
               

               
Cow position:
               
chr12:36500806-36501230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
96-416
               

               
Cow position:
               
chr12:19507770-19507443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 100
               

               
Conread position:
               
108-398
               

               
Cow position:
               
chr12:4720065-4719773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
108-499
               

               
Cow position:
               
chr12:5714739-5714355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 13
               

               
Conread position:
               
108-505
               

               
Cow position:
               
chr12:31532285-31532680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
108-505
               

               
Cow position:
               
chr12:48415398-48415790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
112-504
               

               
Cow position:
               
chr12:11836348-11835964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
118-505
               

               
Cow position:
               
chr12:30596575-30596184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
120-505
               

               
Cow position:
               
chr12:41474193-41473816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
185, 7
               

               
Conread position:
               
121-503
               

               
Cow position:
               
chr12:17881965-17881595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
121-505
               

               
Cow position:
               
chr12:2813332-2812944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
122-291
               

               
Cow position:
               
chr12:33949010-33948842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
122-425
               

               
Cow position:
               
chr12:17879196-17879505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
122-439
               

               
Cow position:
               
chr12:33851465-33851142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
122-453
               

               
Cow position:
               
chr12:28749053-28748707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
122-499
               

               
Cow position:
               
chr12:33323385-33323772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
122-502
               

               
Cow position:
               
chr12:30661840-30662226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
122-503
               

               
Cow position:
               
chr12:18518781-18518394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
122-503
               

               
Cow position:
               
chr12:25561475-25561093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
122-503
               

               
Cow position:
               
chr12:25805033-25805387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
246, 13
               

               
Conread position:
               
122-503
               

               
Cow position:
               
chr12:27563267-27563654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
122-503
               

               
Cow position:
               
chr12:35368749-35368366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 74
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr12:5631773-5632153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr12:30578347-30578738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr12:30745825-30745434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
122-506
               

               
Cow position:
               
chr12:11056980-11056596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
122-532
               

               
Cow position:
               
chr12:37770976-37770563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
123-446
               

               
Cow position:
               
chr12:36544537-36544869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
123-499
               

               
Cow position:
               
chr12:18123774-18123413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
123-505
               

               
Cow position:
               
chr12:6210058-6210436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
124-383
               

               
Cow position:
               
chr12:37169839-37170100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
125-458
               

               
Cow position:
               
chr12:24663218-24662883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
125-499
               

               
Cow position:
               
chr12:39486526-39486156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
125-500
               

               
Cow position:
               
chr12:30805963-30805584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
125-505
               

               
Cow position:
               
chr12:41159688-41159318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
125-505
               

               
Cow position:
               
chr12:42181030-42181420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
165, 12
               

               
Conread position:
               
129-503
               

               
Cow position:
               
chr12:6410636-6411005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
87, 72
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr12:10895461-10895827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
134-505
               

               
Cow position:
               
chr12:8943131-8943499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 60
               

               
Conread position:
               
136-366
               

               
Cow position:
               
chr12:17269891-17269660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
116, 20
               

               
Conread position:
               
136-442
               

               
Cow position:
               
chr12:25917186-25917483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
233, 46
               

               
Conread position:
               
136-453
               

               
Cow position:
               
chr12:27037361-27037676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
168, 21
               

               
Conread position:
               
136-466
               

               
Cow position:
               
chr12:15163228-15162909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
136-470
               

               
Cow position:
               
chr12:29770490-29770817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
167, 30
               

               
Conread position:
               
136-472
               

               
Cow position:
               
chr12:23574856-23574524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 60
               

               
Conread position:
               
136-488
               

               
Cow position:
               
chr12:18765882-18766243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
155, 58
               

               
Conread position:
               
136-489
               

               
Cow position:
               
chr12:15122415-15122073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
114, 21
               

               
Conread position:
               
136-490
               

               
Cow position:
               
chr12:31228663-31228310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
136-503
               

               
Cow position:
               
chr12:19502337-19502697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 58
               

               
Conread position:
               
136-503
               

               
Cow position:
               
chr12:45820277-45820634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
136-504
               

               
Cow position:
               
chr12:4341655-4341998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
208, 21
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr12:7884592-7884934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
158, 21
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr12:25321003-25320644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr12:30753810-30753448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
208, 58
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr12:32715135-32714762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr12:34148271-34148630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr12:40910195-40910569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
136-527
               

               
Cow position:
               
chr12:15429510-15429903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 21
               

               
Conread position:
               
136-529
               

               
Cow position:
               
chr12:6241408-6241004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 21
               

               
Conread position:
               
136-530
               

               
Cow position:
               
chr12:30919516-30919128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
158, 58
               

               
Conread position:
               
138-306
               

               
Cow position:
               
chr12:12232969-12232806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
138-504
               

               
Cow position:
               
chr12:15089604-15089214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 62
               

               
Conread position:
               
138-505
               

               
Cow position:
               
chr12:31959966-31959614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
226, 18
               

               
Conread position:
               
138-505
               

               
Cow position:
               
chr12:42967081-42966722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
166, 35
               

               
Conread position:
               
138-506
               

               
Cow position:
               
chr12:17031702-17031341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 29
               

               
Conread position:
               
140-502
               

               
Cow position:
               
chr12:28582423-28582768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
25, 7
               

               
Conread position:
               
141-504
               

               
Cow position:
               
chr12:9143471-9143114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 15
               

               
Conread position:
               
141-505
               

               
Cow position:
               
chr12:16543494-16543847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 59
               

               
Conread position:
               
143-418
               

               
Cow position:
               
chr12:6485130-6485401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
156, 15
               

               
Conread position:
               
143-486
               

               
Cow position:
               
chr12:5940426-5940083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
143-492
               

               
Cow position:
               
chr12:5635371-5635714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
201, 14
               

               
Conread position:
               
143-496
               

               
Cow position:
               
chr12:25177516-25177864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
201, 14
               

               
Conread position:
               
143-499
               

               
Cow position:
               
chr12:6720409-6720047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 12
               

               
Conread position:
               
143-501
               

               
Cow position:
               
chr12:44517656-44518010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 23
               

               
Conread position:
               
143-502
               

               
Cow position:
               
chr12:30605082-30605432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
269, 57
               

               
Conread position:
               
143-505
               

               
Cow position:
               
chr12:26222903-26223264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
144-507
               

               
Cow position:
               
chr12:47929281-47928933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
203, 13
               

               
Conread position:
               
145-505
               

               
Cow position:
               
chr12:2286661-2286302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
146-449
               

               
Cow position:
               
chr12:30210564-30210255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
156, 48
               

               
Conread position:
               
146-505
               

               
Cow position:
               
chr12:37993653-37994004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
146-505
               

               
Cow position:
               
chr12:41084132-41083787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
198, 9
               

               
Conread position:
               
146-534
               

               
Cow position:
               
chr12:15240654-15241030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
147-504
               

               
Cow position:
               
chr12:37732700-37733055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
29, 37
               

               
Conread position:
               
147-505
               

               
Cow position:
               
chr12:9229420-9229761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
221, 47
               

               
Conread position:
               
147-505
               

               
Cow position:
               
chr12:27802970-27803328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
147-505
               

               
Cow position:
               
chr12:47804236-47803876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
29, 37
               

               
Conread position:
               
149-505
               

               
Cow position:
               
chr12:18020935-18020573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 45
               

               
Conread position:
               
149-505
               

               
Cow position:
               
chr12:40807480-40807117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
102, 45
               

               
Conread position:
               
150-502
               

               
Cow position:
               
chr12:17001335-17000985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
194, 44
               

               
Conread position:
               
150-504
               

               
Cow position:
               
chr12:37728221-37727869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
150-504
               

               
Cow position:
               
chr12:42167706-42167368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
218, 8
               

               
Conread position:
               
150-505
               

               
Cow position:
               
chr12:3950268-3950630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
156, 44
               

               
Conread position:
               
150-527
               

               
Cow position:
               
chr12:31429495-31429861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
145, 7
               

               
Conread position:
               
151-490
               

               
Cow position:
               
chr12:12331434-12331764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
167, 38
               

               
Conread position:
               
151-500
               

               
Cow position:
               
chr12:18768995-18769348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
152-309
               

               
Cow position:
               
chr12:17252124-17252278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
152-499
               

               
Cow position:
               
chr12:39465654-39465305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 49
               

               
Conread position:
               
152-505
               

               
Cow position:
               
chr12:30590842-30590498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
152-507
               

               
Cow position:
               
chr12:24559433-24559072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
153-478
               

               
Cow position:
               
chr12:28213583-28213266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
191, 41
               

               
Conread position:
               
153-505
               

               
Cow position:
               
chr12:5906130-5905778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 41
               

               
Conread position:
               
156-532
               

               
Cow position:
               
chr12:19869531-19869163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
168, 14
               

               
Conread position:
               
157-505
               

               
Cow position:
               
chr12:43942551-43942200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
44, 196
               

               
Conread position:
               
158-499
               

               
Cow position:
               
chr12:18577909-18577576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 40
               

               
Conread position:
               
160-488
               

               
Cow position:
               
chr12:44595731-44596076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
13, 145
               

               
Conread position:
               
160-503
               

               
Cow position:
               
chr12:6488926-6489253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
135, 34
               

               
Conread position:
               
160-505
               

               
Cow position:
               
chr12:32169607-32169256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
136, 34
               

               
Conread position:
               
164-504
               

               
Cow position:
               
chr12:10462053-10461728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
167-464
               

               
Cow position:
               
chr12:35378261-35377961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
116, 27
               

               
Conread position:
               
167-505
               

               
Cow position:
               
chr12:8868822-8869162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
167-505
               

               
Cow position:
               
chr12:44905687-44905358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
177, 27
               

               
Conread position:
               
169-453
               

               
Cow position:
               
chr12:12578977-12579252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
175, 11
               

               
Conread position:
               
172-503
               

               
Cow position:
               
chr12:30170724-30170390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
178-505
               

               
Cow position:
               
chr12:4371290-4370954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 22
               

               
Conread position:
               
180-394
               

               
Cow position:
               
chr12:42784359-42784139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
180-433
               

               
Cow position:
               
chr12:25452400-25452655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
130, 14
               

               
Conread position:
               
180-499
               

               
Cow position:
               
chr12:34673293-34673603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
119, 14
               

               
Conread position:
               
180-505
               

               
Cow position:
               
chr12:30438284-30437972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
188, 14
               

               
Conread position:
               
180-506
               

               
Cow position:
               
chr12:44622395-44622079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
133, 19
               

               
Conread position:
               
180-527
               

               
Cow position:
               
chr12:4008237-4008586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
164, 21
               

               
Conread position:
               
185-504
               

               
Cow position:
               
chr12:34007343-34007021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
184, 15
               

               
Conread position:
               
190-470
               

               
Cow position:
               
chr12:730900-731179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
113, 5
               

               
Conread position:
               
194-505
               

               
Cow position:
               
chr12:15531094-15530786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
5, 112
               

               
Conread position:
               
197-366
               

               
Cow position:
               
chr12:16670299-16670126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 44
               

               
Conread position:
               
197-499
               

               
Cow position:
               
chr12:22882088-22881778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
113, 264
               

               
Conread position:
               
197-500
               

               
Cow position:
               
chr12:12304412-12304126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 32
               

               
Conread position:
               
197-505
               

               
Cow position:
               
chr12:18388257-18388561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
52, 93
               

               
Conread position:
               
197-505
               

               
Cow position:
               
chr12:19691202-19691514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
106, 32
               

               
Conread position:
               
197-505
               

               
Cow position:
               
chr12:29969611-29969296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
197-512
               

               
Cow position:
               
chr12:18943626-18943929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
118, 106
               

               
Conread position:
               
198-447
               

               
Cow position:
               
chr12:3906504-3906247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
75, 50
               

               
Conread position:
               
198-503
               

               
Cow position:
               
chr12:2711529-2711215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
198-525
               

               
Cow position:
               
chr12:8104225-8104543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
121, 28
               

               
Conread position:
               
199-502
               

               
Cow position:
               
chr12:34274494-34274188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
111, 90
               

               
Conread position:
               
200-494
               

               
Cow position:
               
chr12:17774823-17774536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
113, 89
               

               
Conread position:
               
200-499
               

               
Cow position:
               
chr12:41581139-41580843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
148, 21
               

               
Conread position:
               
200-503
               

               
Cow position:
               
chr12:29995435-29995739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
144, 47
               

               
Conread position:
               
200-505
               

               
Cow position:
               
chr12:9914818-9914510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
119, 95
               

               
Conread position:
               
200-505
               

               
Cow position:
               
chr12:20776895-20777208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
201-412
               

               
Cow position:
               
chr12:12637155-12637374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
201-452
               

               
Cow position:
               
chr12:15204870-15204604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
201-457
               

               
Cow position:
               
chr12:29899395-29899668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
44, 108
               

               
Conread position:
               
201-466
               

               
Cow position:
               
chr12:6275072-6275344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
201-466
               

               
Cow position:
               
chr12:8123437-8123170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 94
               

               
Conread position:
               
201-480
               

               
Cow position:
               
chr12:44602534-44602249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 110
               

               
Conread position:
               
201-487
               

               
Cow position:
               
chr12:21393734-21393444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
201-488
               

               
Cow position:
               
chr12:45363389-45363095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
101, 142
               

               
Conread position:
               
201-490
               

               
Cow position:
               
chr12:31530323-31530020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
201-499
               

               
Cow position:
               
chr12:9710180-9710477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
102, 205
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr12:9482277-9482576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 94
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr12:15938238-15938544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
103, 8
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr12:41091561-41091252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
71, 62
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr12:42160531-42160834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
143, 85
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr12:43476376-43476078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
201-504
               

               
Cow position:
               
chr12:16605645-16605924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr12:3056160-3055857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr12:15358368-15358049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr12:17080288-17079979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
97, 133
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr12:18040580-18040871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
143, 81
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr12:19154586-19154890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
80, 87
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr12:19508531-19508851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr12:36118993-36118692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
102, 93
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr12:42254695-42254379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr12:45814234-45814543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
201-506
               

               
Cow position:
               
chr12:19124810-19125107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
146, 82
               

               
Conread position:
               
201-506
               

               
Cow position:
               
chr12:29483858-29484171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
89, 218
               

               
Conread position:
               
201-527
               

               
Cow position:
               
chr12:5273092-5273422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 47
               

               
Conread position:
               
202-503
               

               
Cow position:
               
chr12:20326801-20326494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
51, 95
               

               
Conread position:
               
202-503
               

               
Cow position:
               
chr12:42602216-42602517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
181, 101
               

               
Conread position:
               
202-505
               

               
Cow position:
               
chr12:8075666-8075973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
143, 74
               

               
Conread position:
               
203-447
               

               
Cow position:
               
chr12:31948144-31947902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 93
               

               
Conread position:
               
203-483
               

               
Cow position:
               
chr12:40028728-40029012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 218
               

               
Conread position:
               
205-505
               

               
Cow position:
               
chr12:5109792-5110099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
205-505
               

               
Cow position:
               
chr12:7978061-7977768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
205-505
               

               
Cow position:
               
chr12:18993760-18994067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
208-505
               

               
Cow position:
               
chr12:18420901-18421205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 128
               

               
Conread position:
               
209-505
               

               
Cow position:
               
chr12:12178943-12178642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
117, 69
               

               
Conread position:
               
212-505
               

               
Cow position:
               
chr12:1773648-1773942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 87
               

               
Conread position:
               
213-499
               

               
Cow position:
               
chr12:26317481-26317186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 204
               

               
Conread position:
               
214-502
               

               
Cow position:
               
chr12:6164007-6164305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
224-532
               

               
Cow position:
               
chr12:3579291-3578972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 37
               

               
Conread position:
               
229-505
               

               
Cow position:
               
chr12:25099202-25099485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
116, 78
               

               
Conread position:
               
230-462
               

               
Cow position:
               
chr12:38454908-38454682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
230-497
               

               
Cow position:
               
chr12:8710820-8710560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
114, 72
               

               
Conread position:
               
236-505
               

               
Cow position:
               
chr12:36446630-36446356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
114, 71
               

               
Conread position:
               
245-505
               

               
Cow position:
               
chr12:48436929-48437183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
247-505
               

               
Cow position:
               
chr12:32391830-32391566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
249-453
               

               
Cow position:
               
chr12:25820450-25820660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
46, 57
               

               
Conread position:
               
249-487
               

               
Cow position:
               
chr12:4182711-4182957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
249-505
               

               
Cow position:
               
chr12:24440795-24440533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
249-505
               

               
Cow position:
               
chr12:25456099-25455835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
249-506
               

               
Cow position:
               
chr12:28650937-28650677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 45
               

               
Conread position:
               
250-501
               

               
Cow position:
               
chr12:3071088-3070835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
69, 43
               

               
Conread position:
               
251-499
               

               
Cow position:
               
chr12:29411511-29411762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 164
               

               
Conread position:
               
253-447
               

               
Cow position:
               
chr12:18021568-18021372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 53
               

               
Conread position:
               
254-464
               

               
Cow position:
               
chr12:30476457-30476239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 45
               

               
Conread position:
               
254-488
               

               
Cow position:
               
chr12:3510535-3510301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
254-499
               

               
Cow position:
               
chr12:19039635-19039885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
53, 45
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr12:2241914-2242164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 80
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr12:4116464-4116226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr12:34385532-34385793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 178
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr12:41214346-41214597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
45, 237
               

               
Conread position:
               
256-466
               

               
Cow position:
               
chr12:16584331-16584114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-466
               

               
Cow position:
               
chr12:46105308-46105091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-473
               

               
Cow position:
               
chr12:19372134-19372353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
256-489
               

               
Cow position:
               
chr12:17702253-17702496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr12:1862741-1862997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr12:21671704-21671960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr12:22692824-22693080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr12:25113842-25113589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr12:30059788-30059532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr12:32243958-32244214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr12:33971112-33970856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr12:35537479-35537735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr12:44758652-44758396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr12:45636009-45635753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
258-503
               

               
Cow position:
               
chr12:32786028-32786268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 5
               

               
Conread position:
               
260-505
               

               
Cow position:
               
chr12:8651137-8650885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 47
               

               
Conread position:
               
261-505
               

               
Cow position:
               
chr12:19715068-19715306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 120
               

               
Conread position:
               
267-489
               

               
Cow position:
               
chr12:24107583-24107801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
267-503
               

               
Cow position:
               
chr12:44013878-44014117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
267-505
               

               
Cow position:
               
chr12:24032967-24032727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
267-505
               

               
Cow position:
               
chr12:27562865-27563116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
267-505
               

               
Cow position:
               
chr12:36012651-36012887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
267-505
               

               
Cow position:
               
chr12:44767038-44766804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 60
               

               
Conread position:
               
267-505
               

               
Cow position:
               
chr12:46143784-46143542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
77, 28
               

               
Conread position:
               
268-447
               

               
Cow position:
               
chr12:38511875-38512063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
268-503
               

               
Cow position:
               
chr12:2512488-2512247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
268-503
               

               
Cow position:
               
chr12:19866200-19865965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
268-503
               

               
Cow position:
               
chr12:34429195-34429420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
268-505
               

               
Cow position:
               
chr12:22047431-22047191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
268-505
               

               
Cow position:
               
chr12:36954420-36954654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
268-527
               

               
Cow position:
               
chr12:28572648-28572400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
268-533
               

               
Cow position:
               
chr12:941601-941324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
269-466
               

               
Cow position:
               
chr12:4809263-4809065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
271-466
               

               
Cow position:
               
chr12:15991349-15991543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
271-505
               

               
Cow position:
               
chr12:1246261-1246015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 126
               

               
Conread position:
               
271-505
               

               
Cow position:
               
chr12:26782842-26782602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
272-455
               

               
Cow position:
               
chr12:3057021-3056832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 147
               

               
Conread position:
               
272-466
               

               
Cow position:
               
chr12:3979676-3979877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-466
               

               
Cow position:
               
chr12:8553308-8553107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-466
               

               
Cow position:
               
chr12:13417199-13417400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-466
               

               
Cow position:
               
chr12:46105809-46105608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-484
               

               
Cow position:
               
chr12:43351789-43351582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:1510552-1510792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:2228210-2228450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:3220344-3220584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:4201918-4201678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:5153775-5153535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:8490813-8491053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:8682012-8682252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:9840806-9840566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:11607198-11607438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:12787542-12787782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:16216848-16217088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:21584976-21584736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:22457781-22458019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:26268003-26268243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:32341005-32340765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:32758907-32758667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:35124686-35124446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:37521871-37522111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:37832862-37832622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:37906077-37906317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:39037129-39037369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:43471179-43470939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:43600791-43601031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr12:44005375-44005615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
273-499
               

               
Cow position:
               
chr12:7205659-7205878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
276-486
               

               
Cow position:
               
chr12:46673277-46673489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 54
               

               
Conread position:
               
276-505
               

               
Cow position:
               
chr12:1284509-1284737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
276-505
               

               
Cow position:
               
chr12:8921833-8922068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
277-466
               

               
Cow position:
               
chr12:22932608-22932804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
277-501
               

               
Cow position:
               
chr12:42625415-42625646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
277-502
               

               
Cow position:
               
chr12:35214043-35213811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr12:2821816-2821581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr12:13112495-13112260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr12:14803088-14802853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr12:21486533-21486315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr12:32657799-32657566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr12:41184345-41184110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr12:41185778-41185543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
278-505
               

               
Cow position:
               
chr12:3545859-3545625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
278-527
               

               
Cow position:
               
chr12:17008155-17007891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
66, 82
               

               
Conread position:
               
279-505
               

               
Cow position:
               
chr12:17472274-17472499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 103
               

               
Conread position:
               
284-453
               

               
Cow position:
               
chr12:15768357-15768184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
286-503
               

               
Cow position:
               
chr12:11109711-11109492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 132
               

               
Conread position:
               
287-489
               

               
Cow position:
               
chr12:3994900-3994686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
288-489
               

               
Cow position:
               
chr12:38010117-38010312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
17, 111
               

               
Conread position:
               
288-505
               

               
Cow position:
               
chr12:24755094-24755303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
290-505
               

               
Cow position:
               
chr12:5800973-5800759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
293-505
               

               
Cow position:
               
chr12:45065755-45065555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 93
               

               
Conread position:
               
294-497
               

               
Cow position:
               
chr12:31841378-31841165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
295-502
               

               
Cow position:
               
chr12:1885152-1885368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
298-488
               

               
Cow position:
               
chr12:29161884-29162073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
299-503
               

               
Cow position:
               
chr12:21314953-21314745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
299-505
               

               
Cow position:
               
chr12:12198971-12199184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
11, 141
               

               
Conread position:
               
299-505
               

               
Cow position:
               
chr12:40270162-40270365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 117
               

               
Conread position:
               
300-489
               

               
Cow position:
               
chr12:28804925-28804730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 75
               

               
Conread position:
               
300-499
               

               
Cow position:
               
chr12:35218474-35218678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 122
               

               
Conread position:
               
300-503
               

               
Cow position:
               
chr12:31060044-31060260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
300-505
               

               
Cow position:
               
chr12:3076687-3076902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
300-505
               

               
Cow position:
               
chr12:3473058-3473269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
300-505
               

               
Cow position:
               
chr12:30728306-30728518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
303-505
               

               
Cow position:
               
chr12:28010973-28011178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
41, 116
               

               
Conread position:
               
303-527
               

               
Cow position:
               
chr12:3568871-3568644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
41, 120
               

               
Conread position:
               
305-489
               

               
Cow position:
               
chr12:7625744-7625938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
310-507
               

               
Cow position:
               
chr12:4134590-4134384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 196
               

               
Conread position:
               
314-498
               

               
Cow position:
               
chr12:40158323-40158512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
314-507
               

               
Cow position:
               
chr12:12017793-12017595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
317-501
               

               
Cow position:
               
chr12:3880340-3880531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
318-505
               

               
Cow position:
               
chr12:16359790-16359595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
321-500
               

               
Cow position:
               
chr12:42698314-42698497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
321-505
               

               
Cow position:
               
chr12:5135053-5134860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
321-505
               

               
Cow position:
               
chr12:26868886-26869075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
23, 171
               

               
Conread position:
               
333-505
               

               
Cow position:
               
chr12:7881820-7882000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
342-505
               

               
Cow position:
               
chr12:40307584-40307417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
342-524
               

               
Cow position:
               
chr12:29762710-29762896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 160
               

               
Conread position:
               
346-499
               

               
Cow position:
               
chr12:20316631-20316780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
346-505
               

               
Cow position:
               
chr12:12976296-12976465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
346-505
               

               
Cow position:
               
chr12:31925530-31925371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
348-503
               

               
Cow position:
               
chr12:7109071-7108911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
348-504
               

               
Cow position:
               
chr12:37123390-37123235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
348-505
               

               
Cow position:
               
chr12:45160625-45160791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
348-507
               

               
Cow position:
               
chr12:23154581-23154747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
20, 156
               

               
Conread position:
               
352-505
               

               
Cow position:
               
chr12:17495316-17495471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
357-500
               

               
Cow position:
               
chr12:18572512-18572367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
357-505
               

               
Cow position:
               
chr12:26777284-26777431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 55
               

               
Conread position:
               
377-527
               

               
Cow position:
               
chr12:22132129-22132277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
378-490
               

               
Cow position:
               
chr12:1343254-1343368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
379-505
               

               
Cow position:
               
chr12:8487482-8487609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
379-505
               

               
Cow position:
               
chr12:14131893-14132023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
379-505
               

               
Cow position:
               
chr12:18937238-18937108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
379-505
               

               
Cow position:
               
chr12:25529881-25529751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
379-505
               

               
Cow position:
               
chr12:29119746-29119620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
379-505
               

               
Cow position:
               
chr12:38036905-38036775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
379-510
               

               
Cow position:
               
chr12:33297694-33297562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
388-502
               

               
Cow position:
               
chr12:20283747-20283632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
388-505
               

               
Cow position:
               
chr12:3600058-3600175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
388-505
               

               
Cow position:
               
chr12:17486299-17486416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
405-503
               

               
Cow position:
               
chr12:9413948-9414045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
412-503
               

               
Cow position:
               
chr12:35754831-35754922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.