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Cow genome map

           
Conread name:
           
Ss1.1-rnca23b_e14.5
        

               
Conread position:
               
81-304
               

               
Cow position:
               
chr14:19487161-19487373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
104-385
               

               
Cow position:
               
chr14:12954496-12954221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
193, 17
               

               
Conread position:
               
106-464
               

               
Cow position:
               
chr14:16760280-16760642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
108-504
               

               
Cow position:
               
chr14:8541324-8540933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
211, 13
               

               
Conread position:
               
108-505
               

               
Cow position:
               
chr14:8101680-8102062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
239, 13
               

               
Conread position:
               
108-505
               

               
Cow position:
               
chr14:14622285-14621902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
215, 15
               

               
Conread position:
               
108-505
               

               
Cow position:
               
chr14:18309417-18309027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
189, 13
               

               
Conread position:
               
108-505
               

               
Cow position:
               
chr14:19594252-19593856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
108-505
               

               
Cow position:
               
chr14:40230754-40230353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
108-524
               

               
Cow position:
               
chr14:33247537-33247138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 13
               

               
Conread position:
               
108-533
               

               
Cow position:
               
chr14:39434371-39433949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
110-527
               

               
Cow position:
               
chr14:33751422-33751819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
112-479
               

               
Cow position:
               
chr14:24387335-24387709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
119, 9
               

               
Conread position:
               
114-505
               

               
Cow position:
               
chr14:38168591-38168967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
119-489
               

               
Cow position:
               
chr14:39918847-39918495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
225, 18
               

               
Conread position:
               
122-410
               

               
Cow position:
               
chr14:15492483-15492784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
122-410
               

               
Cow position:
               
chr14:16550103-16549816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
222, 15
               

               
Conread position:
               
122-420
               

               
Cow position:
               
chr14:36254794-36254509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
216, 15
               

               
Conread position:
               
122-460
               

               
Cow position:
               
chr14:20110826-20110481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
122-485
               

               
Cow position:
               
chr14:13845884-13846250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
122-490
               

               
Cow position:
               
chr14:20667110-20666752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
122-500
               

               
Cow position:
               
chr14:10858335-10858710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
131, 14
               

               
Conread position:
               
122-502
               

               
Cow position:
               
chr14:50589496-50589109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
122-503
               

               
Cow position:
               
chr14:5630063-5630443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 15
               

               
Conread position:
               
122-504
               

               
Cow position:
               
chr14:33714779-33714405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr14:19188945-19189323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr14:21357452-21357836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr14:30760111-30760492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
15, 208
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr14:41749861-41749480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr14:47672982-47672599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr14:48426967-48427360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
122-507
               

               
Cow position:
               
chr14:42155072-42154675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
123-592
               

               
Cow position:
               
chr14:23682163-23682634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
125-479
               

               
Cow position:
               
chr14:1646279-1645931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 12
               

               
Conread position:
               
125-488
               

               
Cow position:
               
chr14:15055086-15054719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 13
               

               
Conread position:
               
125-505
               

               
Cow position:
               
chr14:28304881-28304502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
125-505
               

               
Cow position:
               
chr14:35381495-35381872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
125-521
               

               
Cow position:
               
chr14:7695169-7695551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
103, 13
               

               
Conread position:
               
125-528
               

               
Cow position:
               
chr14:45677133-45677532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 5
               

               
Conread position:
               
130-499
               

               
Cow position:
               
chr14:38920858-38921216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
131-479
               

               
Cow position:
               
chr14:34983777-34984122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
86, 26
               

               
Conread position:
               
133-300
               

               
Cow position:
               
chr14:5557214-5557046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
134-501
               

               
Cow position:
               
chr14:45052356-45052718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
53, 34
               

               
Conread position:
               
136-290
               

               
Cow position:
               
chr14:18301875-18302026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
136-304
               

               
Cow position:
               
chr14:25903446-25903610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
136-410
               

               
Cow position:
               
chr14:48838512-48838783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
207, 19
               

               
Conread position:
               
136-436
               

               
Cow position:
               
chr14:33830215-33830511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
208, 58
               

               
Conread position:
               
136-439
               

               
Cow position:
               
chr14:25986430-25986738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
136-472
               

               
Cow position:
               
chr14:1978162-1977828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
16, 166
               

               
Conread position:
               
136-488
               

               
Cow position:
               
chr14:30017372-30017023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
136-501
               

               
Cow position:
               
chr14:19129421-19129791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 21
               

               
Conread position:
               
136-503
               

               
Cow position:
               
chr14:37131577-37131940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 21
               

               
Conread position:
               
136-504
               

               
Cow position:
               
chr14:20600298-20600664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 162
               

               
Conread position:
               
136-504
               

               
Cow position:
               
chr14:26433327-26432958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
155, 30
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr14:18941374-18941020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr14:22583066-22583422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr14:26442425-26442054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 19
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr14:36166856-36167217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr14:39618465-39618092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr14:42330270-42330638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr14:49021986-49021620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
136-506
               

               
Cow position:
               
chr14:41479747-41479374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
136-507
               

               
Cow position:
               
chr14:22988949-22989320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 21
               

               
Conread position:
               
136-527
               

               
Cow position:
               
chr14:19618835-19618458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
208, 21
               

               
Conread position:
               
137-304
               

               
Cow position:
               
chr14:4848264-4848427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
137-503
               

               
Cow position:
               
chr14:10078183-10078539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 19
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr14:25779017-25779378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
182, 19
               

               
Conread position:
               
138-478
               

               
Cow position:
               
chr14:28003884-28004237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 30
               

               
Conread position:
               
138-489
               

               
Cow position:
               
chr14:48496229-48495878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
206, 62
               

               
Conread position:
               
138-501
               

               
Cow position:
               
chr14:37883999-37883639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
143-301
               

               
Cow position:
               
chr14:29734443-29734288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
143-471
               

               
Cow position:
               
chr14:39037148-39037479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
150, 14
               

               
Conread position:
               
143-499
               

               
Cow position:
               
chr14:19863512-19863162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
143-500
               

               
Cow position:
               
chr14:20640708-20640345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 13
               

               
Conread position:
               
143-500
               

               
Cow position:
               
chr14:29632958-29632604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 16
               

               
Conread position:
               
143-505
               

               
Cow position:
               
chr14:34199921-34199558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 14
               

               
Conread position:
               
144-480
               

               
Cow position:
               
chr14:28115265-28114924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
144-505
               

               
Cow position:
               
chr14:27848106-27848484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
145-334
               

               
Cow position:
               
chr14:24945568-24945380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 11
               

               
Conread position:
               
145-499
               

               
Cow position:
               
chr14:24796512-24796145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
145-505
               

               
Cow position:
               
chr14:32371816-32371462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
199, 11
               

               
Conread position:
               
145-505
               

               
Cow position:
               
chr14:33791116-33791473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 10
               

               
Conread position:
               
146-494
               

               
Cow position:
               
chr14:19372264-19372616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 11
               

               
Conread position:
               
146-505
               

               
Cow position:
               
chr14:4990927-4991275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
146-522
               

               
Cow position:
               
chr14:9019955-9020326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
148-451
               

               
Cow position:
               
chr14:20826416-20826702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
196, 42
               

               
Conread position:
               
150-503
               

               
Cow position:
               
chr14:13809867-13810219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
146, 44
               

               
Conread position:
               
150-505
               

               
Cow position:
               
chr14:48740940-48740602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
150-527
               

               
Cow position:
               
chr14:18345801-18345423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 49
               

               
Conread position:
               
151-465
               

               
Cow position:
               
chr14:13042686-13043005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
146, 43
               

               
Conread position:
               
151-500
               

               
Cow position:
               
chr14:17841363-17841008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
150, 39
               

               
Conread position:
               
151-501
               

               
Cow position:
               
chr14:24981387-24981734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
168, 43
               

               
Conread position:
               
152-500
               

               
Cow position:
               
chr14:41210783-41211135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
152-504
               

               
Cow position:
               
chr14:35420835-35420474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
152-505
               

               
Cow position:
               
chr14:16834251-16834614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
148, 42
               

               
Conread position:
               
152-516
               

               
Cow position:
               
chr14:12520373-12520024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
153-476
               

               
Cow position:
               
chr14:27592026-27591700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
149, 41
               

               
Conread position:
               
153-483
               

               
Cow position:
               
chr14:33309573-33309248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
191, 41
               

               
Conread position:
               
153-505
               

               
Cow position:
               
chr14:9308160-9308509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
149, 41
               

               
Conread position:
               
156-479
               

               
Cow position:
               
chr14:40165358-40165679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
188, 28
               

               
Conread position:
               
156-505
               

               
Cow position:
               
chr14:48412949-48412593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
157-503
               

               
Cow position:
               
chr14:35018819-35018474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 44
               

               
Conread position:
               
160-505
               

               
Cow position:
               
chr14:39770290-39769947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
141, 40
               

               
Conread position:
               
161-505
               

               
Cow position:
               
chr14:40033933-40034254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
207, 40
               

               
Conread position:
               
167-430
               

               
Cow position:
               
chr14:15997821-15997555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
133, 27
               

               
Conread position:
               
167-490
               

               
Cow position:
               
chr14:38338189-38337874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
180, 27
               

               
Conread position:
               
167-505
               

               
Cow position:
               
chr14:24236768-24237102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
167-505
               

               
Cow position:
               
chr14:30661932-30662271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
167-505
               

               
Cow position:
               
chr14:39778696-39779037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
167-505
               

               
Cow position:
               
chr14:48950569-48950912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
167-525
               

               
Cow position:
               
chr14:24416821-24417187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
169-466
               

               
Cow position:
               
chr14:8750023-8750319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
128, 25
               

               
Conread position:
               
169-503
               

               
Cow position:
               
chr14:34083219-34082874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
169-535
               

               
Cow position:
               
chr14:40432872-40433235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
175, 25
               

               
Conread position:
               
170-499
               

               
Cow position:
               
chr14:8784138-8784454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
25, 126
               

               
Conread position:
               
170-505
               

               
Cow position:
               
chr14:45605035-45605373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
176-505
               

               
Cow position:
               
chr14:17238304-17238647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
131, 23
               

               
Conread position:
               
176-505
               

               
Cow position:
               
chr14:36555203-36554867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
178-503
               

               
Cow position:
               
chr14:10697547-10697244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
179-501
               

               
Cow position:
               
chr14:23712637-23712966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
180-505
               

               
Cow position:
               
chr14:6735906-6735582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
75, 14
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr14:12856561-12856874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
48, 16
               

               
Conread position:
               
189-505
               

               
Cow position:
               
chr14:25231685-25231365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
196-505
               

               
Cow position:
               
chr14:20712718-20712398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
197-419
               

               
Cow position:
               
chr14:24607939-24608163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
197-478
               

               
Cow position:
               
chr14:33338503-33338223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
102, 48
               

               
Conread position:
               
197-503
               

               
Cow position:
               
chr14:41325475-41325154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
103, 206
               

               
Conread position:
               
197-504
               

               
Cow position:
               
chr14:33774075-33773770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
81, 42
               

               
Conread position:
               
197-505
               

               
Cow position:
               
chr14:5835884-5836188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
197-505
               

               
Cow position:
               
chr14:14187304-14187617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
109, 40
               

               
Conread position:
               
197-505
               

               
Cow position:
               
chr14:27791516-27791814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
171, 85
               

               
Conread position:
               
197-507
               

               
Cow position:
               
chr14:39775078-39774769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
198-503
               

               
Cow position:
               
chr14:12559508-12559203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
127, 5
               

               
Conread position:
               
198-504
               

               
Cow position:
               
chr14:6490727-6490421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 86
               

               
Conread position:
               
198-505
               

               
Cow position:
               
chr14:48571405-48571719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 26
               

               
Conread position:
               
198-524
               

               
Cow position:
               
chr14:3564257-3564575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 92
               

               
Conread position:
               
200-502
               

               
Cow position:
               
chr14:37884435-37884130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
145, 79
               

               
Conread position:
               
200-505
               

               
Cow position:
               
chr14:22966730-22967035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
144, 105
               

               
Conread position:
               
200-505
               

               
Cow position:
               
chr14:25403960-25403660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
144, 119
               

               
Conread position:
               
201-450
               

               
Cow position:
               
chr14:15313537-15313786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
201-457
               

               
Cow position:
               
chr14:14949237-14948974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 88
               

               
Conread position:
               
201-457
               

               
Cow position:
               
chr14:26191128-26190860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
201-470
               

               
Cow position:
               
chr14:27919759-27919489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
201-471
               

               
Cow position:
               
chr14:12667705-12667982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 85
               

               
Conread position:
               
201-473
               

               
Cow position:
               
chr14:29029805-29030080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
201-483
               

               
Cow position:
               
chr14:14979736-14979441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
201-486
               

               
Cow position:
               
chr14:50040214-50040506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 7
               

               
Conread position:
               
201-489
               

               
Cow position:
               
chr14:11043515-11043222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
101, 145
               

               
Conread position:
               
201-490
               

               
Cow position:
               
chr14:37103186-37103480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
201-490
               

               
Cow position:
               
chr14:50362770-50363074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
118, 158
               

               
Conread position:
               
201-497
               

               
Cow position:
               
chr14:20010335-20010035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
100, 93
               

               
Conread position:
               
201-498
               

               
Cow position:
               
chr14:25681903-25682222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
112, 93
               

               
Conread position:
               
201-498
               

               
Cow position:
               
chr14:47609606-47609310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 122
               

               
Conread position:
               
201-498
               

               
Cow position:
               
chr14:48689505-48689807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
144, 35
               

               
Conread position:
               
201-499
               

               
Cow position:
               
chr14:3868452-3868152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
201-499
               

               
Cow position:
               
chr14:37889837-37890128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
201-500
               

               
Cow position:
               
chr14:10609656-10609969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
92, 148
               

               
Conread position:
               
201-500
               

               
Cow position:
               
chr14:16237536-16237226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
201-500
               

               
Cow position:
               
chr14:32452225-32452535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
201-501
               

               
Cow position:
               
chr14:26941245-26940943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 98
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr14:1803137-1802839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
143, 94
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr14:28378335-28378646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
118, 226
               

               
Conread position:
               
201-504
               

               
Cow position:
               
chr14:106591-106292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
201-504
               

               
Cow position:
               
chr14:27305120-27305439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
201-504
               

               
Cow position:
               
chr14:31130399-31130106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
135, 65
               

               
Conread position:
               
201-504
               

               
Cow position:
               
chr14:42903010-42902703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
121, 92
               

               
Conread position:
               
201-504
               

               
Cow position:
               
chr14:48492821-48492502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 116
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:5222315-5222003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
101, 195
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:7290776-7291079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
136, 75
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:8848242-8848532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
167, 17
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:9110734-9110449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
163, 49
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:11508259-11507959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:17554519-17554200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 98
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:18485277-18484957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:19851050-19850748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
113, 123
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:20563258-20562942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 92
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:20932590-20932902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:24922076-24922390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:28987680-28987975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
167, 50
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:36437510-36437200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
103, 162
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:38144131-38143830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
118, 92
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:38378992-38379304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
32, 36
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:40253197-40253507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
48, 67
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:40269865-40269562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
52, 46
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:41809677-41809368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
111, 67
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:43249564-43249869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
180, 97
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:46125294-46124979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 128
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:47507094-47507388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
208, 62
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr14:47584685-47584365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
201-527
               

               
Cow position:
               
chr14:10702863-10702526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
26, 263
               

               
Conread position:
               
201-529
               

               
Cow position:
               
chr14:18904630-18904300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
201-534
               

               
Cow position:
               
chr14:18657631-18657289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
202-463
               

               
Cow position:
               
chr14:47252252-47251980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 122
               

               
Conread position:
               
203-453
               

               
Cow position:
               
chr14:26490764-26490512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 65
               

               
Conread position:
               
203-497
               

               
Cow position:
               
chr14:49086285-49086581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
103, 48
               

               
Conread position:
               
203-503
               

               
Cow position:
               
chr14:1715709-1716016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
138, 83
               

               
Conread position:
               
203-505
               

               
Cow position:
               
chr14:6599979-6599670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 239
               

               
Conread position:
               
203-505
               

               
Cow position:
               
chr14:13385346-13385657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
53, 65
               

               
Conread position:
               
203-505
               

               
Cow position:
               
chr14:20016729-20016423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
100, 92
               

               
Conread position:
               
203-505
               

               
Cow position:
               
chr14:21201846-21201546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
146, 127
               

               
Conread position:
               
203-505
               

               
Cow position:
               
chr14:37679026-37678714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
97, 182
               

               
Conread position:
               
203-507
               

               
Cow position:
               
chr14:28795650-28795962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
69, 60
               

               
Conread position:
               
204-539
               

               
Cow position:
               
chr14:13582773-13582442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 173
               

               
Conread position:
               
205-503
               

               
Cow position:
               
chr14:48447183-48446878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
212-471
               

               
Cow position:
               
chr14:11846482-11846751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 99
               

               
Conread position:
               
214-505
               

               
Cow position:
               
chr14:42596372-42596661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
133, 46
               

               
Conread position:
               
215-505
               

               
Cow position:
               
chr14:33462159-33462442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
217-490
               

               
Cow position:
               
chr14:44742389-44742110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
127, 75
               

               
Conread position:
               
218-462
               

               
Cow position:
               
chr14:12324412-12324665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
221-505
               

               
Cow position:
               
chr14:33326399-33326111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
113, 74
               

               
Conread position:
               
224-505
               

               
Cow position:
               
chr14:43453180-43452896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
225-530
               

               
Cow position:
               
chr14:33828162-33828460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
94, 68
               

               
Conread position:
               
229-505
               

               
Cow position:
               
chr14:35498501-35498217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
231-505
               

               
Cow position:
               
chr14:32501197-32500917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 64
               

               
Conread position:
               
236-505
               

               
Cow position:
               
chr14:18666508-18666234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
114, 57
               

               
Conread position:
               
247-491
               

               
Cow position:
               
chr14:34697650-34697900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
6, 60
               

               
Conread position:
               
248-505
               

               
Cow position:
               
chr14:21284645-21284913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
58, 258
               

               
Conread position:
               
249-498
               

               
Cow position:
               
chr14:19221902-19222158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
45, 221
               

               
Conread position:
               
249-504
               

               
Cow position:
               
chr14:24785969-24786215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
249-504
               

               
Cow position:
               
chr14:24991846-24992095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
95, 167
               

               
Conread position:
               
249-505
               

               
Cow position:
               
chr14:7270979-7270732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 44
               

               
Conread position:
               
249-505
               

               
Cow position:
               
chr14:24580952-24581207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
249-517
               

               
Cow position:
               
chr14:39422569-39422290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
58, 212
               

               
Conread position:
               
250-460
               

               
Cow position:
               
chr14:5365906-5366122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
250-505
               

               
Cow position:
               
chr14:39821186-39821450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
251-499
               

               
Cow position:
               
chr14:21018135-21018390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 136
               

               
Conread position:
               
251-504
               

               
Cow position:
               
chr14:3878487-3878735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
96, 44
               

               
Conread position:
               
251-505
               

               
Cow position:
               
chr14:11820094-11819840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
95, 54
               

               
Conread position:
               
252-504
               

               
Cow position:
               
chr14:35544490-35544232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
254-468
               

               
Cow position:
               
chr14:33643751-33643544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
254-501
               

               
Cow position:
               
chr14:3004841-3005084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
254-503
               

               
Cow position:
               
chr14:10906743-10906999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 35
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr14:7482085-7482339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
66, 39
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr14:8964577-8964827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
114, 85
               

               
Conread position:
               
255-505
               

               
Cow position:
               
chr14:37624458-37624204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
40, 51
               

               
Conread position:
               
255-539
               

               
Cow position:
               
chr14:25362374-25362666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 104
               

               
Conread position:
               
256-464
               

               
Cow position:
               
chr14:44660644-44660859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
256-466
               

               
Cow position:
               
chr14:3509881-3510098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-466
               

               
Cow position:
               
chr14:9033160-9033377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-466
               

               
Cow position:
               
chr14:32756695-32756478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-466
               

               
Cow position:
               
chr14:35934918-35934701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
256-488
               

               
Cow position:
               
chr14:25378465-25378224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr14:10685291-10685547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr14:10867242-10867498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr14:18911353-18911609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr14:22351229-22350973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr14:24613764-24613508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr14:24799457-24799201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr14:35017292-35017036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr14:39327838-39327582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr14:40199229-40198976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
258-505
               

               
Cow position:
               
chr14:12250163-12249913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
261-476
               

               
Cow position:
               
chr14:6175620-6175838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 61
               

               
Conread position:
               
261-504
               

               
Cow position:
               
chr14:26620652-26620902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
262-501
               

               
Cow position:
               
chr14:15032791-15033036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 160
               

               
Conread position:
               
263-502
               

               
Cow position:
               
chr14:34355656-34355421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
265-473
               

               
Cow position:
               
chr14:10721688-10721483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
267-499
               

               
Cow position:
               
chr14:12036803-12036565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
267-503
               

               
Cow position:
               
chr14:23464774-23464533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
77, 202
               

               
Conread position:
               
267-504
               

               
Cow position:
               
chr14:27312465-27312707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
43, 100
               

               
Conread position:
               
267-505
               

               
Cow position:
               
chr14:9901220-9901454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
267-505
               

               
Cow position:
               
chr14:36709162-36709406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 56
               

               
Conread position:
               
267-506
               

               
Cow position:
               
chr14:34221095-34221339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
267-520
               

               
Cow position:
               
chr14:22381511-22381257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
53, 104
               

               
Conread position:
               
268-497
               

               
Cow position:
               
chr14:41127940-41128169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
268-498
               

               
Cow position:
               
chr14:46490216-46489978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 35
               

               
Conread position:
               
268-504
               

               
Cow position:
               
chr14:27362083-27362327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
268-504
               

               
Cow position:
               
chr14:28090932-28090689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
268-504
               

               
Cow position:
               
chr14:32470669-32470911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
268-555
               

               
Cow position:
               
chr14:15518333-15518045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
271-502
               

               
Cow position:
               
chr14:49671106-49671345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 150
               

               
Conread position:
               
271-505
               

               
Cow position:
               
chr14:21964167-21964404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
272-504
               

               
Cow position:
               
chr14:14270862-14271101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-504
               

               
Cow position:
               
chr14:31195775-31196014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-504
               

               
Cow position:
               
chr14:35266966-35266731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
272-504
               

               
Cow position:
               
chr14:40970027-40969789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr14:7338044-7338284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr14:11147136-11146896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr14:14081809-14082049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr14:17527438-17527198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr14:18793340-18793580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr14:22102770-22103011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr14:30798519-30798280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr14:33289490-33289250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr14:39313607-39313847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr14:40484236-40483996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr14:41148568-41148808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr14:46220385-46220625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr14:47954579-47954339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-527
               

               
Cow position:
               
chr14:19318695-19318433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 34
               

               
Conread position:
               
273-503
               

               
Cow position:
               
chr14:10912918-10912691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
277-498
               

               
Cow position:
               
chr14:44383157-44382923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 218
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr14:8507033-8507268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr14:23090327-23090094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 7
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr14:25991996-25991761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr14:30927055-30927290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr14:46204776-46204541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
278-505
               

               
Cow position:
               
chr14:17755613-17755843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
66, 152
               

               
Conread position:
               
285-505
               

               
Cow position:
               
chr14:23322982-23322755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
287-505
               

               
Cow position:
               
chr14:23154827-23154600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
289-505
               

               
Cow position:
               
chr14:33538862-33538641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 5
               

               
Conread position:
               
290-505
               

               
Cow position:
               
chr14:8754392-8754610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 147
               

               
Conread position:
               
293-503
               

               
Cow position:
               
chr14:37333759-37333973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
294-500
               

               
Cow position:
               
chr14:17397531-17397326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
294-500
               

               
Cow position:
               
chr14:19633247-19633461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
295-505
               

               
Cow position:
               
chr14:41756327-41756542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 129
               

               
Conread position:
               
298-500
               

               
Cow position:
               
chr14:12614023-12613823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 147
               

               
Conread position:
               
299-486
               

               
Cow position:
               
chr14:50504278-50504084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
299-505
               

               
Cow position:
               
chr14:8495226-8495437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 134
               

               
Conread position:
               
300-503
               

               
Cow position:
               
chr14:17013579-17013790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 142
               

               
Conread position:
               
300-505
               

               
Cow position:
               
chr14:11810496-11810286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
304-505
               

               
Cow position:
               
chr14:5502082-5501868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
304-505
               

               
Cow position:
               
chr14:33209272-33209075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 61
               

               
Conread position:
               
305-505
               

               
Cow position:
               
chr14:46735384-46735596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
306-505
               

               
Cow position:
               
chr14:7316908-7317120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
310-474
               

               
Cow position:
               
chr14:26470712-26470882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
310-504
               

               
Cow position:
               
chr14:41190792-41190597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 111
               

               
Conread position:
               
312-505
               

               
Cow position:
               
chr14:19996403-19996602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
312-506
               

               
Cow position:
               
chr14:39807371-39807174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
314-489
               

               
Cow position:
               
chr14:12484211-12484036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
314-496
               

               
Cow position:
               
chr14:39518784-39518971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
314-504
               

               
Cow position:
               
chr14:19624174-19624373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
314-505
               

               
Cow position:
               
chr14:8006238-8006054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 97
               

               
Conread position:
               
318-488
               

               
Cow position:
               
chr14:15913455-15913284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
320-507
               

               
Cow position:
               
chr14:37640330-37640518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 107
               

               
Conread position:
               
321-505
               

               
Cow position:
               
chr14:38296185-38295992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
321-505
               

               
Cow position:
               
chr14:46965655-46965842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 179
               

               
Conread position:
               
321-529
               

               
Cow position:
               
chr14:14466381-14466175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
322-504
               

               
Cow position:
               
chr14:44237609-44237417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
322-507
               

               
Cow position:
               
chr14:19957811-19957625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
323-505
               

               
Cow position:
               
chr14:42918188-42918374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
323-507
               

               
Cow position:
               
chr14:11641472-11641289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
329-502
               

               
Cow position:
               
chr14:35607355-35607173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
330-496
               

               
Cow position:
               
chr14:47036692-47036525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 127
               

               
Conread position:
               
330-505
               

               
Cow position:
               
chr14:24893861-24894044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
333-505
               

               
Cow position:
               
chr14:45068981-45068803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
336-505
               

               
Cow position:
               
chr14:37108797-37108627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 117
               

               
Conread position:
               
343-502
               

               
Cow position:
               
chr14:6234148-6233982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
17, 7
               

               
Conread position:
               
343-527
               

               
Cow position:
               
chr14:13634587-13634397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
345-527
               

               
Cow position:
               
chr14:34020808-34020998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
346-489
               

               
Cow position:
               
chr14:27866015-27865864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
346-500
               

               
Cow position:
               
chr14:25695503-25695659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
346-503
               

               
Cow position:
               
chr14:34330667-34330821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
346-505
               

               
Cow position:
               
chr14:4649891-4649732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
346-505
               

               
Cow position:
               
chr14:19193894-19193734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
346-505
               

               
Cow position:
               
chr14:19206981-19207148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
346-505
               

               
Cow position:
               
chr14:24797451-24797296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 57
               

               
Conread position:
               
346-505
               

               
Cow position:
               
chr14:35651082-35650922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 132
               

               
Conread position:
               
346-506
               

               
Cow position:
               
chr14:4109354-4109188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 119
               

               
Conread position:
               
346-517
               

               
Cow position:
               
chr14:21534912-21534744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
347-500
               

               
Cow position:
               
chr14:9029553-9029406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
21, 30
               

               
Conread position:
               
347-503
               

               
Cow position:
               
chr14:34096467-34096313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
348-505
               

               
Cow position:
               
chr14:36775730-36775884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
350-500
               

               
Cow position:
               
chr14:20736655-20736808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
18, 47
               

               
Conread position:
               
350-503
               

               
Cow position:
               
chr14:34329527-34329377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
353-503
               

               
Cow position:
               
chr14:29300236-29300083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
356-505
               

               
Cow position:
               
chr14:15795673-15795526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
356-505
               

               
Cow position:
               
chr14:41716238-41716391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 48
               

               
Conread position:
               
365-480
               

               
Cow position:
               
chr14:20107730-20107845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
368-496
               

               
Cow position:
               
chr14:2036683-2036810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
368-504
               

               
Cow position:
               
chr14:16525021-16525161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
372-505
               

               
Cow position:
               
chr14:16342294-16342157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 129
               

               
Conread position:
               
373-505
               

               
Cow position:
               
chr14:26654928-26654794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
373-534
               

               
Cow position:
               
chr14:19513225-19513064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
379-489
               

               
Cow position:
               
chr14:32574309-32574417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
379-500
               

               
Cow position:
               
chr14:27845757-27845883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
379-505
               

               
Cow position:
               
chr14:11981811-11981937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
379-505
               

               
Cow position:
               
chr14:19985978-19986108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
381-497
               

               
Cow position:
               
chr14:45300664-45300544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
392-485
               

               
Cow position:
               
chr14:33300850-33300946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
392-505
               

               
Cow position:
               
chr14:7558261-7558148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
393-531
               

               
Cow position:
               
chr14:13465090-13464953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
394-506
               

               
Cow position:
               
chr14:18811952-18811834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
418-507
               

               
Cow position:
               
chr14:13723402-13723313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.