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Cow genome map

           
Conread name:
           
Ss1.1-rnca23b_e14.5
        

               
Conread position:
               
64-502
               

               
Cow position:
               
chr18:23446890-23447352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
72-499
               

               
Cow position:
               
chr18:24855692-24856114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
75-490
               

               
Cow position:
               
chr18:51443291-51443689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
243, 46
               

               
Conread position:
               
78-505
               

               
Cow position:
               
chr18:51655893-51656326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
240, 32
               

               
Conread position:
               
81-527
               

               
Cow position:
               
chr18:51712569-51713006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
84-505
               

               
Cow position:
               
chr18:7650133-7649721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
101-505
               

               
Cow position:
               
chr18:20641368-20641758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
108-489
               

               
Cow position:
               
chr18:37381965-37382355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
108-490
               

               
Cow position:
               
chr18:11867464-11867089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
108-505
               

               
Cow position:
               
chr18:1144063-1144466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
108-505
               

               
Cow position:
               
chr18:18918837-18919226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
108-505
               

               
Cow position:
               
chr18:20174011-20174403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
108-505
               

               
Cow position:
               
chr18:49655807-49655442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
108-527
               

               
Cow position:
               
chr18:51691338-51691765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
118-500
               

               
Cow position:
               
chr18:19646287-19645907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
118-505
               

               
Cow position:
               
chr18:50700796-50700392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
120-476
               

               
Cow position:
               
chr18:12809972-12809615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
121-506
               

               
Cow position:
               
chr18:29065277-29065646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
176, 16
               

               
Conread position:
               
122-301
               

               
Cow position:
               
chr18:23630501-23630671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
122-331
               

               
Cow position:
               
chr18:22568953-22569164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
122-338
               

               
Cow position:
               
chr18:43796845-43797057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
122-360
               

               
Cow position:
               
chr18:49038573-49038334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
122-421
               

               
Cow position:
               
chr18:8170977-8171273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
122-442
               

               
Cow position:
               
chr18:3211994-3211658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
122-465
               

               
Cow position:
               
chr18:10977098-10977444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
122-471
               

               
Cow position:
               
chr18:18592578-18592233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
222, 10
               

               
Conread position:
               
122-493
               

               
Cow position:
               
chr18:29648894-29648520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
122-495
               

               
Cow position:
               
chr18:48713656-48713287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
122-496
               

               
Cow position:
               
chr18:10322910-10322536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
184, 14
               

               
Conread position:
               
122-496
               

               
Cow position:
               
chr18:44262737-44262358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 15
               

               
Conread position:
               
122-498
               

               
Cow position:
               
chr18:9974216-9974592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 51
               

               
Conread position:
               
122-499
               

               
Cow position:
               
chr18:22789976-22790342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 74
               

               
Conread position:
               
122-500
               

               
Cow position:
               
chr18:46452769-46453146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
112, 15
               

               
Conread position:
               
122-501
               

               
Cow position:
               
chr18:28657800-28658183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
122-503
               

               
Cow position:
               
chr18:46048867-46048490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
122-504
               

               
Cow position:
               
chr18:17005366-17004978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
184, 15
               

               
Conread position:
               
122-504
               

               
Cow position:
               
chr18:28101744-28101354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr18:10904961-10904573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr18:14586365-14586749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
222, 15
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr18:38985805-38985414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
136, 15
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr18:56181345-56181728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
122-506
               

               
Cow position:
               
chr18:12059108-12058743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
122-509
               

               
Cow position:
               
chr18:42431978-42432369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
122-520
               

               
Cow position:
               
chr18:15613750-15614136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
122-526
               

               
Cow position:
               
chr18:55119983-55119578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
122-527
               

               
Cow position:
               
chr18:19193258-19193645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
196, 15
               

               
Conread position:
               
122-530
               

               
Cow position:
               
chr18:9089808-9089405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
180, 15
               

               
Conread position:
               
123-498
               

               
Cow position:
               
chr18:29058397-29058762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
123-505
               

               
Cow position:
               
chr18:7965345-7964958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
123-505
               

               
Cow position:
               
chr18:21195225-21195612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
123-528
               

               
Cow position:
               
chr18:31672405-31672803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
124-282
               

               
Cow position:
               
chr18:50632333-50632490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
124-505
               

               
Cow position:
               
chr18:4539774-4540145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
123, 70
               

               
Conread position:
               
125-468
               

               
Cow position:
               
chr18:42479481-42479828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
125-480
               

               
Cow position:
               
chr18:32883407-32883053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
189, 12
               

               
Conread position:
               
125-489
               

               
Cow position:
               
chr18:43283651-43284015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
125-503
               

               
Cow position:
               
chr18:22120779-22121153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 33
               

               
Conread position:
               
125-527
               

               
Cow position:
               
chr18:45903793-45904189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 12
               

               
Conread position:
               
126-435
               

               
Cow position:
               
chr18:39623906-39623595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
11, 33
               

               
Conread position:
               
126-527
               

               
Cow position:
               
chr18:15173117-15172736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
129-466
               

               
Cow position:
               
chr18:43020300-43020624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
8, 66
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr18:2592067-2592446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
154, 25
               

               
Conread position:
               
130-499
               

               
Cow position:
               
chr18:3158492-3158869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
131-501
               

               
Cow position:
               
chr18:1495405-1495036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
132-503
               

               
Cow position:
               
chr18:7951215-7950842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
133-504
               

               
Cow position:
               
chr18:11322694-11322317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr18:7359855-7359461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
134-504
               

               
Cow position:
               
chr18:37002730-37002357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 60
               

               
Conread position:
               
134-505
               

               
Cow position:
               
chr18:10656534-10656173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
121, 5
               

               
Conread position:
               
136-453
               

               
Cow position:
               
chr18:39434918-39434602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
168, 21
               

               
Conread position:
               
136-474
               

               
Cow position:
               
chr18:17390900-17391216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
232, 21
               

               
Conread position:
               
136-497
               

               
Cow position:
               
chr18:11184034-11183676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
208, 21
               

               
Conread position:
               
136-499
               

               
Cow position:
               
chr18:21768711-21768360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
136-500
               

               
Cow position:
               
chr18:10891609-10891265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
156, 20
               

               
Conread position:
               
136-500
               

               
Cow position:
               
chr18:46727684-46727328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
174, 38
               

               
Conread position:
               
136-502
               

               
Cow position:
               
chr18:33159038-33158693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
308, 65
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr18:12113271-12113640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
133, 19
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr18:21192317-21192683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 52
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr18:21266602-21266235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr18:22214584-22214213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
159, 58
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr18:25647153-25647522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr18:30360052-30360393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr18:37023455-37023829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 57
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr18:54572194-54572569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr18:56159556-56159192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
171, 62
               

               
Conread position:
               
137-506
               

               
Cow position:
               
chr18:12117759-12118119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
137-512
               

               
Cow position:
               
chr18:19273001-19273382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
159, 57
               

               
Conread position:
               
138-465
               

               
Cow position:
               
chr18:33896324-33896656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 60
               

               
Conread position:
               
138-489
               

               
Cow position:
               
chr18:38344899-38344543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
160, 19
               

               
Conread position:
               
138-505
               

               
Cow position:
               
chr18:20127013-20127375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
145, 7
               

               
Conread position:
               
138-505
               

               
Cow position:
               
chr18:31082255-31082593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
226, 18
               

               
Conread position:
               
138-507
               

               
Cow position:
               
chr18:20270922-20271295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
139-505
               

               
Cow position:
               
chr18:30794519-30794161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 55
               

               
Conread position:
               
140-506
               

               
Cow position:
               
chr18:45104348-45104720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
142-420
               

               
Cow position:
               
chr18:8300105-8299825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
153, 7
               

               
Conread position:
               
142-489
               

               
Cow position:
               
chr18:19849670-19850008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
140, 31
               

               
Conread position:
               
142-489
               

               
Cow position:
               
chr18:55788011-55787668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
202, 58
               

               
Conread position:
               
142-498
               

               
Cow position:
               
chr18:33407711-33407344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
142-500
               

               
Cow position:
               
chr18:50082169-50082513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 15
               

               
Conread position:
               
143-331
               

               
Cow position:
               
chr18:35535059-35535247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
155, 14
               

               
Conread position:
               
143-499
               

               
Cow position:
               
chr18:55505492-55505133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
166, 15
               

               
Conread position:
               
143-503
               

               
Cow position:
               
chr18:3180500-3180149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
225, 56
               

               
Conread position:
               
143-505
               

               
Cow position:
               
chr18:33157902-33157548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
112, 14
               

               
Conread position:
               
143-505
               

               
Cow position:
               
chr18:36459020-36458661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
177, 51
               

               
Conread position:
               
143-505
               

               
Cow position:
               
chr18:39875173-39875532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 14
               

               
Conread position:
               
143-505
               

               
Cow position:
               
chr18:47512093-47511721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 15
               

               
Conread position:
               
143-527
               

               
Cow position:
               
chr18:11691318-11691706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
143-532
               

               
Cow position:
               
chr18:6310168-6309778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
144-350
               

               
Cow position:
               
chr18:7077040-7076841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 13
               

               
Conread position:
               
144-449
               

               
Cow position:
               
chr18:1954503-1954811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
153, 12
               

               
Conread position:
               
144-476
               

               
Cow position:
               
chr18:47828904-47828585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
200, 12
               

               
Conread position:
               
144-489
               

               
Cow position:
               
chr18:56184021-56183680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 13
               

               
Conread position:
               
144-490
               

               
Cow position:
               
chr18:42431522-42431866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
144-498
               

               
Cow position:
               
chr18:56171926-56172286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
182, 50
               

               
Conread position:
               
144-499
               

               
Cow position:
               
chr18:11779740-11779399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
144-503
               

               
Cow position:
               
chr18:36230641-36230982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
159, 11
               

               
Conread position:
               
144-505
               

               
Cow position:
               
chr18:2849181-2849534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
161, 50
               

               
Conread position:
               
144-505
               

               
Cow position:
               
chr18:4884434-4884788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
164, 11
               

               
Conread position:
               
144-532
               

               
Cow position:
               
chr18:28923759-28924134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 50
               

               
Conread position:
               
146-362
               

               
Cow position:
               
chr18:31711476-31711695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 21
               

               
Conread position:
               
146-500
               

               
Cow position:
               
chr18:3044527-3044164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
147, 21
               

               
Conread position:
               
146-505
               

               
Cow position:
               
chr18:55788911-55789265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
198, 9
               

               
Conread position:
               
147-413
               

               
Cow position:
               
chr18:21740730-21740991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
197, 47
               

               
Conread position:
               
147-504
               

               
Cow position:
               
chr18:11377449-11377093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
221, 47
               

               
Conread position:
               
147-505
               

               
Cow position:
               
chr18:9366006-9365639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 53
               

               
Conread position:
               
147-505
               

               
Cow position:
               
chr18:19620026-19619674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
147-506
               

               
Cow position:
               
chr18:3417242-3416898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
221, 9
               

               
Conread position:
               
150-382
               

               
Cow position:
               
chr18:51594722-51594952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
194, 50
               

               
Conread position:
               
150-505
               

               
Cow position:
               
chr18:25282472-25282828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
192, 44
               

               
Conread position:
               
150-505
               

               
Cow position:
               
chr18:51298560-51298208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
151-295
               

               
Cow position:
               
chr18:23505412-23505270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
152-475
               

               
Cow position:
               
chr18:33008146-33007813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
152-503
               

               
Cow position:
               
chr18:31586294-31586635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
6, 43
               

               
Conread position:
               
152-505
               

               
Cow position:
               
chr18:51757173-51756825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
35, 39
               

               
Conread position:
               
155-431
               

               
Cow position:
               
chr18:18369285-18369566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 15
               

               
Conread position:
               
155-505
               

               
Cow position:
               
chr18:44801812-44802156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 39
               

               
Conread position:
               
155-505
               

               
Cow position:
               
chr18:45571089-45570748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 32
               

               
Conread position:
               
156-490
               

               
Cow position:
               
chr18:7956224-7955884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
157-504
               

               
Cow position:
               
chr18:11685057-11684718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 37
               

               
Conread position:
               
158-505
               

               
Cow position:
               
chr18:47183219-47183557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
190, 36
               

               
Conread position:
               
160-376
               

               
Cow position:
               
chr18:25006421-25006633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
187, 40
               

               
Conread position:
               
160-503
               

               
Cow position:
               
chr18:49100296-49100639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
137, 39
               

               
Conread position:
               
163-505
               

               
Cow position:
               
chr18:4381363-4381021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
167-499
               

               
Cow position:
               
chr18:29356559-29356897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 34
               

               
Conread position:
               
167-499
               

               
Cow position:
               
chr18:33299969-33299630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
131, 27
               

               
Conread position:
               
167-505
               

               
Cow position:
               
chr18:6881290-6881611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
167-505
               

               
Cow position:
               
chr18:22591054-22591398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
167-505
               

               
Cow position:
               
chr18:35012252-35012579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
202, 32
               

               
Conread position:
               
167-505
               

               
Cow position:
               
chr18:55000677-55001012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
135, 27
               

               
Conread position:
               
167-514
               

               
Cow position:
               
chr18:51212248-51211899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
133, 27
               

               
Conread position:
               
167-526
               

               
Cow position:
               
chr18:10954531-10954178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
177, 27
               

               
Conread position:
               
167-528
               

               
Cow position:
               
chr18:26939048-26938686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
141, 27
               

               
Conread position:
               
168-505
               

               
Cow position:
               
chr18:10576175-10575839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
168-505
               

               
Cow position:
               
chr18:33488146-33488483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
168-505
               

               
Cow position:
               
chr18:50637409-50637736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
63, 26
               

               
Conread position:
               
169-518
               

               
Cow position:
               
chr18:34527032-34527388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
170-501
               

               
Cow position:
               
chr18:23766347-23766685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
170-505
               

               
Cow position:
               
chr18:40759272-40758943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
170-505
               

               
Cow position:
               
chr18:55589430-55589748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
174-500
               

               
Cow position:
               
chr18:4668441-4668760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
194, 22
               

               
Conread position:
               
176-475
               

               
Cow position:
               
chr18:3018027-3018322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
176-505
               

               
Cow position:
               
chr18:29958105-29958419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
178-500
               

               
Cow position:
               
chr18:29371921-29371601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
169, 21
               

               
Conread position:
               
179-435
               

               
Cow position:
               
chr18:3193758-3193496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
179-499
               

               
Cow position:
               
chr18:52635017-52635349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
180-498
               

               
Cow position:
               
chr18:20126357-20126035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 20
               

               
Conread position:
               
180-503
               

               
Cow position:
               
chr18:44483721-44484029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
232, 14
               

               
Conread position:
               
180-504
               

               
Cow position:
               
chr18:4666164-4666483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
122, 19
               

               
Conread position:
               
180-505
               

               
Cow position:
               
chr18:3166437-3166761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
180-505
               

               
Cow position:
               
chr18:4182136-4182463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
182-505
               

               
Cow position:
               
chr18:39001753-39002068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
183-505
               

               
Cow position:
               
chr18:15025721-15025406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
185-503
               

               
Cow position:
               
chr18:5487289-5486980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 9
               

               
Conread position:
               
185-505
               

               
Cow position:
               
chr18:4368731-4369053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
187-505
               

               
Cow position:
               
chr18:35537190-35537502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
115, 10
               

               
Conread position:
               
192-505
               

               
Cow position:
               
chr18:9558021-9557708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
197-420
               

               
Cow position:
               
chr18:16686298-16686525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
197-489
               

               
Cow position:
               
chr18:12023600-12023890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
143, 85
               

               
Conread position:
               
197-501
               

               
Cow position:
               
chr18:5578344-5578033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 29
               

               
Conread position:
               
197-505
               

               
Cow position:
               
chr18:25206151-25206465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 73
               

               
Conread position:
               
197-507
               

               
Cow position:
               
chr18:15880807-15881132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 221
               

               
Conread position:
               
197-527
               

               
Cow position:
               
chr18:30248102-30248423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
198-505
               

               
Cow position:
               
chr18:7966278-7965990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 70
               

               
Conread position:
               
198-505
               

               
Cow position:
               
chr18:32873628-32873310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 98
               

               
Conread position:
               
199-523
               

               
Cow position:
               
chr18:3027325-3027658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 27
               

               
Conread position:
               
200-483
               

               
Cow position:
               
chr18:4495852-4496139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
112, 90
               

               
Conread position:
               
200-488
               

               
Cow position:
               
chr18:23476653-23476930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
119, 105
               

               
Conread position:
               
200-489
               

               
Cow position:
               
chr18:22411577-22411874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
200-500
               

               
Cow position:
               
chr18:55461672-55461975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
99, 255
               

               
Conread position:
               
200-505
               

               
Cow position:
               
chr18:13360088-13359789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
144, 46
               

               
Conread position:
               
201-469
               

               
Cow position:
               
chr18:4629075-4628795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 140
               

               
Conread position:
               
201-476
               

               
Cow position:
               
chr18:40149948-40149678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
201-484
               

               
Cow position:
               
chr18:17649705-17649988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 69
               

               
Conread position:
               
201-497
               

               
Cow position:
               
chr18:4625921-4625630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
180, 82
               

               
Conread position:
               
201-497
               

               
Cow position:
               
chr18:51827314-51827030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
201-500
               

               
Cow position:
               
chr18:55782397-55782691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
163, 41
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr18:4927102-4926803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
217, 138
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr18:24957331-24957025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
121, 22
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr18:39662812-39662514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
143, 110
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr18:43806485-43806180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
108, 20
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr18:51405873-51406174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
91, 79
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr18:3209759-3209445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 230
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr18:4748849-4749156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr18:5995503-5995199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 87
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr18:9029643-9029345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
215, 82
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr18:12775751-12776046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
101, 139
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr18:14815315-14815608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
118, 24
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr18:16227590-16227288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
165, 59
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr18:19143477-19143789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr18:19362260-19362564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 36
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr18:42454989-42455293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr18:52637496-52637802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
136, 82
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr18:55692849-55692549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
92, 142
               

               
Conread position:
               
201-507
               

               
Cow position:
               
chr18:50382281-50381982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
143, 23
               

               
Conread position:
               
202-505
               

               
Cow position:
               
chr18:21252020-21251713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 139
               

               
Conread position:
               
203-505
               

               
Cow position:
               
chr18:55552998-55552692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
204-505
               

               
Cow position:
               
chr18:55499102-55498793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
88, 83
               

               
Conread position:
               
205-501
               

               
Cow position:
               
chr18:9883702-9883401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 32
               

               
Conread position:
               
207-505
               

               
Cow position:
               
chr18:41238900-41238598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 31
               

               
Conread position:
               
208-466
               

               
Cow position:
               
chr18:896056-895793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
209-500
               

               
Cow position:
               
chr18:8104914-8105209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
28, 216
               

               
Conread position:
               
211-505
               

               
Cow position:
               
chr18:11832143-11831865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
133, 71
               

               
Conread position:
               
214-502
               

               
Cow position:
               
chr18:14048729-14048443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 79
               

               
Conread position:
               
215-486
               

               
Cow position:
               
chr18:4796991-4796715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
95, 33
               

               
Conread position:
               
221-535
               

               
Cow position:
               
chr18:29649673-29649998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
223-505
               

               
Cow position:
               
chr18:35636335-35636623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 196
               

               
Conread position:
               
224-505
               

               
Cow position:
               
chr18:46873088-46873376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
120, 83
               

               
Conread position:
               
230-503
               

               
Cow position:
               
chr18:44548908-44549178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
62, 187
               

               
Conread position:
               
236-505
               

               
Cow position:
               
chr18:27554551-27554827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 71
               

               
Conread position:
               
240-503
               

               
Cow position:
               
chr18:47314286-47314565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
241-489
               

               
Cow position:
               
chr18:1405802-1405556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
249-490
               

               
Cow position:
               
chr18:35582112-35582360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
249-506
               

               
Cow position:
               
chr18:49161451-49161730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
251-505
               

               
Cow position:
               
chr18:11680708-11680447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
252-505
               

               
Cow position:
               
chr18:39115153-39115417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
253-467
               

               
Cow position:
               
chr18:14871889-14872101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
116, 52
               

               
Conread position:
               
254-464
               

               
Cow position:
               
chr18:219320-219100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
254-466
               

               
Cow position:
               
chr18:15340464-15340674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
65, 162
               

               
Conread position:
               
254-489
               

               
Cow position:
               
chr18:26355048-26355290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
91, 55
               

               
Conread position:
               
254-499
               

               
Cow position:
               
chr18:16417723-16417964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
254-503
               

               
Cow position:
               
chr18:52658392-52658149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 110
               

               
Conread position:
               
254-503
               

               
Cow position:
               
chr18:55768190-55768445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
254-504
               

               
Cow position:
               
chr18:7487230-7486980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
114, 39
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr18:267835-268084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
65, 163
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr18:6290763-6290511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
90, 38
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr18:11166961-11166706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr18:18562556-18562811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr18:56150663-56150929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr18:19531686-19531430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr18:26344056-26343800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr18:31140079-31139823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
256-521
               

               
Cow position:
               
chr18:4371746-4371474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-522
               

               
Cow position:
               
chr18:45967602-45967326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
257-498
               

               
Cow position:
               
chr18:30673664-30673907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
111, 36
               

               
Conread position:
               
260-530
               

               
Cow position:
               
chr18:18339992-18340255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
43, 156
               

               
Conread position:
               
261-499
               

               
Cow position:
               
chr18:47517243-47517476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
58, 42
               

               
Conread position:
               
261-503
               

               
Cow position:
               
chr18:16847668-16847427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 156
               

               
Conread position:
               
261-517
               

               
Cow position:
               
chr18:41271059-41270805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 54
               

               
Conread position:
               
264-485
               

               
Cow position:
               
chr18:7059192-7058977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
104, 31
               

               
Conread position:
               
266-489
               

               
Cow position:
               
chr18:8164065-8164297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
39, 130
               

               
Conread position:
               
267-502
               

               
Cow position:
               
chr18:21205331-21205094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
52, 149
               

               
Conread position:
               
267-503
               

               
Cow position:
               
chr18:4316279-4316036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
77, 184
               

               
Conread position:
               
267-503
               

               
Cow position:
               
chr18:33606598-33606361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
268-474
               

               
Cow position:
               
chr18:24945839-24946055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
268-503
               

               
Cow position:
               
chr18:13631986-13632222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 137
               

               
Conread position:
               
268-505
               

               
Cow position:
               
chr18:25626988-25626752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
268-505
               

               
Cow position:
               
chr18:35827446-35827688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
268-505
               

               
Cow position:
               
chr18:51579467-51579711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 43
               

               
Conread position:
               
270-500
               

               
Cow position:
               
chr18:33793667-33793440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
48, 6
               

               
Conread position:
               
271-505
               

               
Cow position:
               
chr18:4707317-4707561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
271-505
               

               
Cow position:
               
chr18:34621397-34621637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 230
               

               
Conread position:
               
271-505
               

               
Cow position:
               
chr18:47868428-47868182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
271-505
               

               
Cow position:
               
chr18:52864344-52864589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:11251068-11251308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:16516633-16516873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:17429062-17429299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:20980225-20980465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:24591094-24590858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:26447978-26447737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:26485709-26485469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:28546760-28547000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:32755524-32755284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:35258649-35258405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:40059990-40059750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:40329824-40329584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:41854147-41854387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:42421438-42421678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:46581212-46581453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:48290477-48290711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:50631168-50630928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:54365222-54365462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:55046541-55046301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr18:55561589-55561829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
273-525
               

               
Cow position:
               
chr18:20998662-20998911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
277-490
               

               
Cow position:
               
chr18:56017151-56017373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
277-501
               

               
Cow position:
               
chr18:18957839-18958060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
277-503
               

               
Cow position:
               
chr18:48453645-48453422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr18:602159-602392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr18:2270546-2270776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr18:18091458-18091694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr18:23661272-23661037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr18:40252692-40252927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr18:44236164-44235927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr18:45573065-45572836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr18:56023211-56023443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
278-503
               

               
Cow position:
               
chr18:33756830-33756608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
278-505
               

               
Cow position:
               
chr18:22092735-22092508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 139
               

               
Conread position:
               
278-505
               

               
Cow position:
               
chr18:26286868-26286640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
41, 105
               

               
Conread position:
               
278-505
               

               
Cow position:
               
chr18:35551802-35552034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
281-505
               

               
Cow position:
               
chr18:18627370-18627600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
284-505
               

               
Cow position:
               
chr18:24342569-24342352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
19, 5
               

               
Conread position:
               
287-499
               

               
Cow position:
               
chr18:43823003-43823220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
287-505
               

               
Cow position:
               
chr18:36445386-36445159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
287-505
               

               
Cow position:
               
chr18:43539418-43539191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
288-499
               

               
Cow position:
               
chr18:36098153-36097933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
289-505
               

               
Cow position:
               
chr18:49543421-49543205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
289-532
               

               
Cow position:
               
chr18:35076333-35076085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 155
               

               
Conread position:
               
290-489
               

               
Cow position:
               
chr18:19977035-19977237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
290-505
               

               
Cow position:
               
chr18:35058284-35058068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 126
               

               
Conread position:
               
293-503
               

               
Cow position:
               
chr18:23807930-23808144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 118
               

               
Conread position:
               
294-499
               

               
Cow position:
               
chr18:32121121-32121329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 124
               

               
Conread position:
               
296-499
               

               
Cow position:
               
chr18:56167980-56168186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
48, 173
               

               
Conread position:
               
296-507
               

               
Cow position:
               
chr18:56361665-56361877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 11
               

               
Conread position:
               
298-535
               

               
Cow position:
               
chr18:6275757-6275511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
300-446
               

               
Cow position:
               
chr18:54056495-54056344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
300-505
               

               
Cow position:
               
chr18:3115398-3115187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
12, 6
               

               
Conread position:
               
300-505
               

               
Cow position:
               
chr18:25002944-25003150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
19, 104
               

               
Conread position:
               
300-505
               

               
Cow position:
               
chr18:33272869-33272672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
301-505
               

               
Cow position:
               
chr18:20864924-20864710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
302-505
               

               
Cow position:
               
chr18:13293444-13293237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 116
               

               
Conread position:
               
304-504
               

               
Cow position:
               
chr18:19487045-19486841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
304-505
               

               
Cow position:
               
chr18:49200575-49200367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
310-504
               

               
Cow position:
               
chr18:39709814-39709618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 41
               

               
Conread position:
               
314-504
               

               
Cow position:
               
chr18:5647169-5646978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 182
               

               
Conread position:
               
317-501
               

               
Cow position:
               
chr18:16045084-16045269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
321-505
               

               
Cow position:
               
chr18:238429-238617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
23, 130
               

               
Conread position:
               
321-505
               

               
Cow position:
               
chr18:32860557-32860375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
342-505
               

               
Cow position:
               
chr18:8967889-8967725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
342-505
               

               
Cow position:
               
chr18:21721385-21721553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
343-532
               

               
Cow position:
               
chr18:35535393-35535587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
345-505
               

               
Cow position:
               
chr18:54658187-54658028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
345-506
               

               
Cow position:
               
chr18:5991390-5991224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 149
               

               
Conread position:
               
346-500
               

               
Cow position:
               
chr18:49665271-49665420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
346-505
               

               
Cow position:
               
chr18:81644-81483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
346-505
               

               
Cow position:
               
chr18:3422607-3422447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
346-505
               

               
Cow position:
               
chr18:13172629-13172796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
346-505
               

               
Cow position:
               
chr18:45395893-45395728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
346-506
               

               
Cow position:
               
chr18:56163474-56163313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
346-507
               

               
Cow position:
               
chr18:11811863-11811704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
346-507
               

               
Cow position:
               
chr18:27388440-27388274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
347-489
               

               
Cow position:
               
chr18:20797985-20797843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
347-503
               

               
Cow position:
               
chr18:48407679-48407518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
347-505
               

               
Cow position:
               
chr18:11671699-11671537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 154
               

               
Conread position:
               
348-500
               

               
Cow position:
               
chr18:19761586-19761430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
348-505
               

               
Cow position:
               
chr18:2608843-2609002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
348-505
               

               
Cow position:
               
chr18:18976976-18976811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
350-504
               

               
Cow position:
               
chr18:24048124-24047976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
350-505
               

               
Cow position:
               
chr18:24834707-24834866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
352-505
               

               
Cow position:
               
chr18:35295447-35295290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
362-489
               

               
Cow position:
               
chr18:24734992-24734860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
362-500
               

               
Cow position:
               
chr18:52402646-52402786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
365-506
               

               
Cow position:
               
chr18:27078713-27078575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
367-505
               

               
Cow position:
               
chr18:5711802-5711941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
368-505
               

               
Cow position:
               
chr18:7076633-7076490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
371-505
               

               
Cow position:
               
chr18:51595175-51595313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 130
               

               
Conread position:
               
375-505
               

               
Cow position:
               
chr18:46135173-46135047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
376-505
               

               
Cow position:
               
chr18:36264930-36265056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
377-528
               

               
Cow position:
               
chr18:37702989-37703142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
379-503
               

               
Cow position:
               
chr18:4490017-4490145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
379-505
               

               
Cow position:
               
chr18:2569657-2569527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
382-505
               

               
Cow position:
               
chr18:56191355-56191477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
388-505
               

               
Cow position:
               
chr18:10897497-10897380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
389-497
               

               
Cow position:
               
chr18:38670267-38670377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
406-503
               

               
Cow position:
               
chr18:50974752-50974848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
505-636
               

               
Cow position:
               
chr18:15172261-15172127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 118
               

               
Conread position:
               
505-636
               

               
Cow position:
               
chr18:53872305-53872165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 130
               
Show alignments to all cow chromosomes.