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Cow genome map

           
Conread name:
           
Ss1.1-rnca23b_e14.5
        

               
Conread position:
               
64-507
               

               
Cow position:
               
chr20:5998416-5998866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
66-503
               

               
Cow position:
               
chr20:15548639-15549093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 99
               

               
Conread position:
               
106-500
               

               
Cow position:
               
chr20:10200553-10200149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
106-503
               

               
Cow position:
               
chr20:13269818-13269429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
108-447
               

               
Cow position:
               
chr20:4334336-4334660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
54, 13
               

               
Conread position:
               
108-496
               

               
Cow position:
               
chr20:9433784-9433409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
183, 13
               

               
Conread position:
               
108-498
               

               
Cow position:
               
chr20:42309763-42310153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
108-500
               

               
Cow position:
               
chr20:6603235-6602848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
108-505
               

               
Cow position:
               
chr20:12995791-12996207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
108-536
               

               
Cow position:
               
chr20:3599197-3599621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
111-443
               

               
Cow position:
               
chr20:22485061-22484724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
112-505
               

               
Cow position:
               
chr20:6240322-6240727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
114-529
               

               
Cow position:
               
chr20:7438659-7439074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
185, 23
               

               
Conread position:
               
122-366
               

               
Cow position:
               
chr20:17100548-17100303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
122-426
               

               
Cow position:
               
chr20:32463335-32463638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
122-435
               

               
Cow position:
               
chr20:2298605-2298905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
120, 15
               

               
Conread position:
               
122-464
               

               
Cow position:
               
chr20:13025429-13025765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
124, 15
               

               
Conread position:
               
122-477
               

               
Cow position:
               
chr20:3255224-3254878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
122-491
               

               
Cow position:
               
chr20:19237261-19236894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
122-497
               

               
Cow position:
               
chr20:17251909-17251518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
122-498
               

               
Cow position:
               
chr20:8578441-8578053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
122-499
               

               
Cow position:
               
chr20:12239496-12239872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
122-499
               

               
Cow position:
               
chr20:28605396-28605013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
122-500
               

               
Cow position:
               
chr20:14879976-14879594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
122-501
               

               
Cow position:
               
chr20:31746446-31746819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
122-503
               

               
Cow position:
               
chr20:35146204-35145813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr20:398122-398492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
183, 15
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr20:11340613-11341003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr20:12420429-12420819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr20:12581766-12582145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr20:14807073-14806688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
122-507
               

               
Cow position:
               
chr20:8556080-8556474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
122-527
               

               
Cow position:
               
chr20:10208997-10208582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
123-436
               

               
Cow position:
               
chr20:18379566-18379253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
123-488
               

               
Cow position:
               
chr20:14980318-14980696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
123-505
               

               
Cow position:
               
chr20:5702910-5702547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
124-446
               

               
Cow position:
               
chr20:30710454-30710789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
124-505
               

               
Cow position:
               
chr20:7426010-7426387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
124-505
               

               
Cow position:
               
chr20:7441951-7442322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
125-404
               

               
Cow position:
               
chr20:7738047-7738323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 12
               

               
Conread position:
               
125-502
               

               
Cow position:
               
chr20:13829442-13829069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
125-505
               

               
Cow position:
               
chr20:40127162-40127534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
127-503
               

               
Cow position:
               
chr20:22065246-22064874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
130-505
               

               
Cow position:
               
chr20:25009456-25009841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 25
               

               
Conread position:
               
132-461
               

               
Cow position:
               
chr20:1576273-1575945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
134-331
               

               
Cow position:
               
chr20:21815733-21815540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
136-480
               

               
Cow position:
               
chr20:16935144-16935476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 14
               

               
Conread position:
               
136-503
               

               
Cow position:
               
chr20:5827110-5826741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
136, 21
               

               
Conread position:
               
136-504
               

               
Cow position:
               
chr20:6238467-6238844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 42
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr20:7756456-7756827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
158, 22
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr20:11550537-11550168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 31
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr20:24069976-24069614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 22
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr20:26996699-26996336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 8
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr20:29845220-29844857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr20:34777350-34776988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
228, 13
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr20:39728623-39728251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
87, 63
               

               
Conread position:
               
136-509
               

               
Cow position:
               
chr20:20739117-20739491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
137-489
               

               
Cow position:
               
chr20:38578593-38578939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
158, 63
               

               
Conread position:
               
137-499
               

               
Cow position:
               
chr20:36779559-36779923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
199, 19
               

               
Conread position:
               
137-503
               

               
Cow position:
               
chr20:19751476-19751113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
207, 20
               

               
Conread position:
               
137-504
               

               
Cow position:
               
chr20:34596928-34597305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr20:4755664-4756023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
138-477
               

               
Cow position:
               
chr20:31081207-31080874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
172, 7
               

               
Conread position:
               
138-502
               

               
Cow position:
               
chr20:23846494-23846867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 56
               

               
Conread position:
               
138-505
               

               
Cow position:
               
chr20:32847513-32847154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
156, 18
               

               
Conread position:
               
138-505
               

               
Cow position:
               
chr20:38768293-38768651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 62
               

               
Conread position:
               
140-502
               

               
Cow position:
               
chr20:31323954-31323602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
142-499
               

               
Cow position:
               
chr20:35906886-35907239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
143-383
               

               
Cow position:
               
chr20:5078792-5078548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
156, 51
               

               
Conread position:
               
143-438
               

               
Cow position:
               
chr20:7363125-7362835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
160, 13
               

               
Conread position:
               
143-472
               

               
Cow position:
               
chr20:2819708-2819386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
176, 57
               

               
Conread position:
               
143-477
               

               
Cow position:
               
chr20:3320979-3321308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
110, 58
               

               
Conread position:
               
143-492
               

               
Cow position:
               
chr20:2204523-2204849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
201, 14
               

               
Conread position:
               
143-500
               

               
Cow position:
               
chr20:11542118-11542476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
143-503
               

               
Cow position:
               
chr20:6096332-6096681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
201, 14
               

               
Conread position:
               
143-504
               

               
Cow position:
               
chr20:42469922-42469569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
160, 14
               

               
Conread position:
               
143-505
               

               
Cow position:
               
chr20:13752389-13752043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
143-505
               

               
Cow position:
               
chr20:23870656-23871013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
139, 14
               

               
Conread position:
               
143-506
               

               
Cow position:
               
chr20:33532468-33532112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
144-362
               

               
Cow position:
               
chr20:38514942-38514728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
200, 40
               

               
Conread position:
               
144-501
               

               
Cow position:
               
chr20:40177407-40177056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
200, 13
               

               
Conread position:
               
144-502
               

               
Cow position:
               
chr20:9537294-9536939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
151, 13
               

               
Conread position:
               
144-503
               

               
Cow position:
               
chr20:15565665-15566027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
200, 50
               

               
Conread position:
               
144-527
               

               
Cow position:
               
chr20:9412650-9412274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 13
               

               
Conread position:
               
144-531
               

               
Cow position:
               
chr20:28067260-28067650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
154, 36
               

               
Conread position:
               
145-498
               

               
Cow position:
               
chr20:39398642-39398297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 12
               

               
Conread position:
               
145-505
               

               
Cow position:
               
chr20:25686186-25686549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
154, 13
               

               
Conread position:
               
146-460
               

               
Cow position:
               
chr20:5636643-5636327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
86, 48
               

               
Conread position:
               
146-464
               

               
Cow position:
               
chr20:20242244-20241943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
146-474
               

               
Cow position:
               
chr20:5814726-5814401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
173, 34
               

               
Conread position:
               
146-486
               

               
Cow position:
               
chr20:3141733-3141404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
198, 27
               

               
Conread position:
               
146-490
               

               
Cow position:
               
chr20:39415910-39415555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
137, 41
               

               
Conread position:
               
146-505
               

               
Cow position:
               
chr20:4945094-4945443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
147-437
               

               
Cow position:
               
chr20:22978487-22978188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
159, 9
               

               
Conread position:
               
147-501
               

               
Cow position:
               
chr20:18320634-18320989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 9
               

               
Conread position:
               
147-505
               

               
Cow position:
               
chr20:40511595-40511955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
166, 47
               

               
Conread position:
               
148-499
               

               
Cow position:
               
chr20:20984153-20983815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
149-503
               

               
Cow position:
               
chr20:28296454-28296094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
149-505
               

               
Cow position:
               
chr20:1139609-1139971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
171, 38
               

               
Conread position:
               
150-527
               

               
Cow position:
               
chr20:33144395-33144775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
148, 44
               

               
Conread position:
               
151-504
               

               
Cow position:
               
chr20:40422946-40423287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
151-506
               

               
Cow position:
               
chr20:42458700-42459050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
24, 6
               

               
Conread position:
               
152-489
               

               
Cow position:
               
chr20:36207970-36207620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
117, 42
               

               
Conread position:
               
152-499
               

               
Cow position:
               
chr20:580764-581113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
144, 42
               

               
Conread position:
               
157-501
               

               
Cow position:
               
chr20:14759514-14759858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
187, 37
               

               
Conread position:
               
158-459
               

               
Cow position:
               
chr20:8308166-8307861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
152, 23
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr20:32083932-32084277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 37
               

               
Conread position:
               
160-498
               

               
Cow position:
               
chr20:23792752-23792411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 34
               

               
Conread position:
               
160-505
               

               
Cow position:
               
chr20:8702763-8703104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
160-506
               

               
Cow position:
               
chr20:19363215-19363561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
137, 23
               

               
Conread position:
               
160-530
               

               
Cow position:
               
chr20:22235460-22235089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
67, 34
               

               
Conread position:
               
161-507
               

               
Cow position:
               
chr20:39743457-39743114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
132, 39
               

               
Conread position:
               
161-528
               

               
Cow position:
               
chr20:35009589-35009963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
163-530
               

               
Cow position:
               
chr20:20203363-20202991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 37
               

               
Conread position:
               
167-403
               

               
Cow position:
               
chr20:22265111-22265341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
167-419
               

               
Cow position:
               
chr20:39266817-39267071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
131, 27
               

               
Conread position:
               
167-433
               

               
Cow position:
               
chr20:25161984-25162258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
167-456
               

               
Cow position:
               
chr20:28441468-28441177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
176, 28
               

               
Conread position:
               
167-505
               

               
Cow position:
               
chr20:33363659-33363322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 27
               

               
Conread position:
               
167-533
               

               
Cow position:
               
chr20:17846100-17845736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
137, 27
               

               
Conread position:
               
168-489
               

               
Cow position:
               
chr20:38818140-38817828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
168-500
               

               
Cow position:
               
chr20:15235892-15235569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
178, 26
               

               
Conread position:
               
168-504
               

               
Cow position:
               
chr20:38872862-38873209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
171-489
               

               
Cow position:
               
chr20:8429886-8429559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
171-504
               

               
Cow position:
               
chr20:6890854-6890508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 137
               

               
Conread position:
               
176-505
               

               
Cow position:
               
chr20:6257928-6258261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
179-504
               

               
Cow position:
               
chr20:27298610-27298931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
179-505
               

               
Cow position:
               
chr20:4621225-4621537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
111, 21
               

               
Conread position:
               
180-502
               

               
Cow position:
               
chr20:21929033-21928710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
164, 15
               

               
Conread position:
               
180-505
               

               
Cow position:
               
chr20:38551496-38551176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
140, 14
               

               
Conread position:
               
181-489
               

               
Cow position:
               
chr20:37165837-37165544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
138, 13
               

               
Conread position:
               
182-503
               

               
Cow position:
               
chr20:19459539-19459840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
190-505
               

               
Cow position:
               
chr20:7659091-7659411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
5, 225
               

               
Conread position:
               
192-470
               

               
Cow position:
               
chr20:15312792-15312496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
197-495
               

               
Cow position:
               
chr20:40782074-40781780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
147, 96
               

               
Conread position:
               
197-498
               

               
Cow position:
               
chr20:35797722-35797414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
197-499
               

               
Cow position:
               
chr20:11482021-11482331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
197-500
               

               
Cow position:
               
chr20:3606848-3607147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
103, 35
               

               
Conread position:
               
197-501
               

               
Cow position:
               
chr20:35365159-35364857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
197-503
               

               
Cow position:
               
chr20:23064722-23065028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
122, 54
               

               
Conread position:
               
197-505
               

               
Cow position:
               
chr20:4206085-4205765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
198-466
               

               
Cow position:
               
chr20:34221591-34221314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
136, 107
               

               
Conread position:
               
198-505
               

               
Cow position:
               
chr20:31927350-31927656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 80
               

               
Conread position:
               
200-500
               

               
Cow position:
               
chr20:22313050-22313350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
106, 142
               

               
Conread position:
               
200-504
               

               
Cow position:
               
chr20:16715502-16715203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 109
               

               
Conread position:
               
200-505
               

               
Cow position:
               
chr20:39518117-39517813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
118, 88
               

               
Conread position:
               
201-444
               

               
Cow position:
               
chr20:41089686-41089931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
201-457
               

               
Cow position:
               
chr20:36010905-36010639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
201-475
               

               
Cow position:
               
chr20:7211148-7210867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
143, 7
               

               
Conread position:
               
201-489
               

               
Cow position:
               
chr20:3739895-3740183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 71
               

               
Conread position:
               
201-489
               

               
Cow position:
               
chr20:21714870-21714571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
31, 248
               

               
Conread position:
               
201-490
               

               
Cow position:
               
chr20:41028598-41028300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
201-498
               

               
Cow position:
               
chr20:35176668-35176961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 130
               

               
Conread position:
               
201-499
               

               
Cow position:
               
chr20:5950534-5950825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
108, 86
               

               
Conread position:
               
201-500
               

               
Cow position:
               
chr20:22959238-22959536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
167, 75
               

               
Conread position:
               
201-502
               

               
Cow position:
               
chr20:27407777-27408071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr20:14572254-14572552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 95
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr20:34918380-34918083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 36
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr20:6054400-6054710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 224
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr20:9014238-9014546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr20:11176138-11176445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 67
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr20:20352803-20353112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr20:28440194-28439882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
143, 94
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr20:31740110-31740413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 180
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr20:34001280-34001594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr20:39325500-39325187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
201-506
               

               
Cow position:
               
chr20:13493851-13493539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 88
               

               
Conread position:
               
201-507
               

               
Cow position:
               
chr20:32513111-32512783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
201-508
               

               
Cow position:
               
chr20:16556653-16556346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
202-476
               

               
Cow position:
               
chr20:35999801-35999518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 107
               

               
Conread position:
               
202-503
               

               
Cow position:
               
chr20:34097845-34098154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
42, 258
               

               
Conread position:
               
202-505
               

               
Cow position:
               
chr20:39417795-39418092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
117, 63
               

               
Conread position:
               
203-503
               

               
Cow position:
               
chr20:3331178-3331490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
56, 67
               

               
Conread position:
               
203-505
               

               
Cow position:
               
chr20:17670291-17669984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
204-459
               

               
Cow position:
               
chr20:14433315-14433580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
204-523
               

               
Cow position:
               
chr20:35958754-35958429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
205-506
               

               
Cow position:
               
chr20:18551467-18551164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
207-505
               

               
Cow position:
               
chr20:23505931-23505631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
119, 145
               

               
Conread position:
               
207-506
               

               
Cow position:
               
chr20:40257073-40256771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
102, 86
               

               
Conread position:
               
209-505
               

               
Cow position:
               
chr20:39019797-39019498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
86, 186
               

               
Conread position:
               
212-505
               

               
Cow position:
               
chr20:36331324-36331626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 65
               

               
Conread position:
               
213-502
               

               
Cow position:
               
chr20:10884260-10884561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
89, 109
               

               
Conread position:
               
230-505
               

               
Cow position:
               
chr20:13967176-13967456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
71, 193
               

               
Conread position:
               
236-489
               

               
Cow position:
               
chr20:11864059-11864318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
236-505
               

               
Cow position:
               
chr20:38350488-38350764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
239-505
               

               
Cow position:
               
chr20:18100479-18100221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
129, 66
               

               
Conread position:
               
241-505
               

               
Cow position:
               
chr20:24521818-24521553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
82, 61
               

               
Conread position:
               
248-505
               

               
Cow position:
               
chr20:18618698-18618441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
47, 27
               

               
Conread position:
               
249-485
               

               
Cow position:
               
chr20:34240599-34240347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
249-505
               

               
Cow position:
               
chr20:9379467-9379211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
250-505
               

               
Cow position:
               
chr20:15760889-15761146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
73, 48
               

               
Conread position:
               
254-476
               

               
Cow position:
               
chr20:28832027-28831794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
254-485
               

               
Cow position:
               
chr20:13821522-13821764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
254-487
               

               
Cow position:
               
chr20:17904215-17903980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
254-497
               

               
Cow position:
               
chr20:20359726-20359967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 110
               

               
Conread position:
               
254-502
               

               
Cow position:
               
chr20:21019623-21019370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr20:3035162-3034896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
43, 246
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr20:7642221-7641963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
90, 53
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr20:13876646-13876906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr20:14735725-14735479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
90, 45
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr20:15593354-15593098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr20:18185623-18185381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr20:20312691-20312935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
64, 39
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr20:22704351-22704090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr20:26077138-26076887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr20:30817594-30817339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
45, 167
               

               
Conread position:
               
254-507
               

               
Cow position:
               
chr20:32577861-32578120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
47, 118
               

               
Conread position:
               
256-466
               

               
Cow position:
               
chr20:15059198-15059415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr20:4727520-4727264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr20:8083326-8083069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr20:16188786-16189042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr20:20469701-20469445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr20:23354760-23355016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr20:33021974-33021718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr20:35073680-35073424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr20:39269441-39269697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr20:40009233-40008977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
257-489
               

               
Cow position:
               
chr20:7550291-7550059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
260-505
               

               
Cow position:
               
chr20:27314720-27314484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
261-480
               

               
Cow position:
               
chr20:24392028-24391807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
261-489
               

               
Cow position:
               
chr20:34365076-34364853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 84
               

               
Conread position:
               
261-499
               

               
Cow position:
               
chr20:27340112-27339874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
83, 103
               

               
Conread position:
               
261-505
               

               
Cow position:
               
chr20:15069189-15068946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
261-506
               

               
Cow position:
               
chr20:3781374-3781626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
264-505
               

               
Cow position:
               
chr20:9473566-9473812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
35, 120
               

               
Conread position:
               
267-505
               

               
Cow position:
               
chr20:6848674-6848424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
268-447
               

               
Cow position:
               
chr20:39247955-39247769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
45, 39
               

               
Conread position:
               
268-504
               

               
Cow position:
               
chr20:14756025-14756264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
268-505
               

               
Cow position:
               
chr20:10178056-10178309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
268-505
               

               
Cow position:
               
chr20:15543855-15544096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
268-505
               

               
Cow position:
               
chr20:29754828-29754588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
268-505
               

               
Cow position:
               
chr20:31464335-31464579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
271-500
               

               
Cow position:
               
chr20:9988619-9988393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
271-505
               

               
Cow position:
               
chr20:10469105-10468873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
271-505
               

               
Cow position:
               
chr20:20202032-20201794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 176
               

               
Conread position:
               
271-505
               

               
Cow position:
               
chr20:39137164-39137406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
271-508
               

               
Cow position:
               
chr20:32068812-32069058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
272-503
               

               
Cow position:
               
chr20:11330127-11330365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:774188-774428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:1762076-1761836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:5097191-5097431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:8364814-8365054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:9489351-9489590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:9994564-9994324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:17864407-17864167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:17901979-17901739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:18507288-18507050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:20492650-20492890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:20692783-20693023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:24022970-24022730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:24104429-24104669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:25143627-25143387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:28973859-28973619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:31325528-31325768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:31334810-31335050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:32452407-32452167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:33993972-33994212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:34276345-34276585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:37435869-37435629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:39062770-39062530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr20:41451767-41452004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
272-518
               

               
Cow position:
               
chr20:26469024-26469278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
273-499
               

               
Cow position:
               
chr20:26680161-26679931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
273-503
               

               
Cow position:
               
chr20:33435127-33435365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 146
               

               
Conread position:
               
276-504
               

               
Cow position:
               
chr20:8910954-8910727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
276-505
               

               
Cow position:
               
chr20:11741264-11741501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 227
               

               
Conread position:
               
277-466
               

               
Cow position:
               
chr20:18651886-18651690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr20:8707726-8707961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr20:26737172-26737407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr20:31505610-31505375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr20:34457998-34458231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr20:35094794-35094565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
277-514
               

               
Cow position:
               
chr20:40161095-40161336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 35
               

               
Conread position:
               
278-490
               

               
Cow position:
               
chr20:37200394-37200170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 178
               

               
Conread position:
               
278-505
               

               
Cow position:
               
chr20:2913995-2913764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
278-505
               

               
Cow position:
               
chr20:19313032-19313264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
279-524
               

               
Cow position:
               
chr20:19410330-19410586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
283-503
               

               
Cow position:
               
chr20:10235884-10235656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
283-504
               

               
Cow position:
               
chr20:24398601-24398829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
284-504
               

               
Cow position:
               
chr20:8020925-8020698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
14, 217
               

               
Conread position:
               
284-505
               

               
Cow position:
               
chr20:18399792-18399563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
10, 221
               

               
Conread position:
               
285-505
               

               
Cow position:
               
chr20:5502472-5502698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
286-466
               

               
Cow position:
               
chr20:18837131-18837320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
288-505
               

               
Cow position:
               
chr20:33177212-33176984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
289-505
               

               
Cow position:
               
chr20:40185660-40185871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
290-499
               

               
Cow position:
               
chr20:22445616-22445827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
292-503
               

               
Cow position:
               
chr20:7182653-7182872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
293-505
               

               
Cow position:
               
chr20:14831597-14831811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 50
               

               
Conread position:
               
294-505
               

               
Cow position:
               
chr20:7132372-7132150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
294-507
               

               
Cow position:
               
chr20:21325133-21324926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
295-499
               

               
Cow position:
               
chr20:14740082-14740290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
76, 122
               

               
Conread position:
               
295-504
               

               
Cow position:
               
chr20:19328416-19328203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
295-560
               

               
Cow position:
               
chr20:11923226-11923496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 123
               

               
Conread position:
               
299-501
               

               
Cow position:
               
chr20:23679135-23679340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 115
               

               
Conread position:
               
299-504
               

               
Cow position:
               
chr20:24869023-24869225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 46
               

               
Conread position:
               
299-505
               

               
Cow position:
               
chr20:32636557-32636763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
64, 117
               

               
Conread position:
               
300-505
               

               
Cow position:
               
chr20:10913322-10913532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
300-505
               

               
Cow position:
               
chr20:12441676-12441889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
300-505
               

               
Cow position:
               
chr20:22007511-22007306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
300-527
               

               
Cow position:
               
chr20:35970956-35970719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
300-532
               

               
Cow position:
               
chr20:7806548-7806789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
68, 12
               

               
Conread position:
               
301-505
               

               
Cow position:
               
chr20:11614034-11614241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
301-505
               

               
Cow position:
               
chr20:38486538-38486746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
43, 105
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr20:19238421-19238624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr20:33169867-33170067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
305-506
               

               
Cow position:
               
chr20:19146879-19146671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
307-498
               

               
Cow position:
               
chr20:5104437-5104626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
38, 103
               

               
Conread position:
               
310-519
               

               
Cow position:
               
chr20:35760670-35760458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 105
               

               
Conread position:
               
312-504
               

               
Cow position:
               
chr20:41704164-41703957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
314-527
               

               
Cow position:
               
chr20:17733778-17733997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
30, 185
               

               
Conread position:
               
317-539
               

               
Cow position:
               
chr20:5269079-5269298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
318-505
               

               
Cow position:
               
chr20:34202642-34202449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
321-508
               

               
Cow position:
               
chr20:11043513-11043698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 104
               

               
Conread position:
               
322-505
               

               
Cow position:
               
chr20:34251689-34251876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 124
               

               
Conread position:
               
323-498
               

               
Cow position:
               
chr20:13994801-13994618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
323-500
               

               
Cow position:
               
chr20:38414982-38415164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
327-504
               

               
Cow position:
               
chr20:647031-646850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
5, 46
               

               
Conread position:
               
330-499
               

               
Cow position:
               
chr20:41977395-41977229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
14, 88
               

               
Conread position:
               
336-503
               

               
Cow position:
               
chr20:4781538-4781365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 7
               

               
Conread position:
               
336-505
               

               
Cow position:
               
chr20:5116328-5116502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
13, 166
               

               
Conread position:
               
343-500
               

               
Cow position:
               
chr20:18423685-18423527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
343-504
               

               
Cow position:
               
chr20:16291439-16291274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
22, 113
               

               
Conread position:
               
345-501
               

               
Cow position:
               
chr20:24902499-24902665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
346-455
               

               
Cow position:
               
chr20:9730048-9729937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
346-483
               

               
Cow position:
               
chr20:41119874-41119739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
346-504
               

               
Cow position:
               
chr20:15582075-15582233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
346-505
               

               
Cow position:
               
chr20:3502258-3502096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
350-503
               

               
Cow position:
               
chr20:1640485-1640643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
350-504
               

               
Cow position:
               
chr20:22029901-22029741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
366-505
               

               
Cow position:
               
chr20:4892960-4893095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
375-489
               

               
Cow position:
               
chr20:39212736-39212623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
375-505
               

               
Cow position:
               
chr20:5729542-5729674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
376-505
               

               
Cow position:
               
chr20:14620341-14620470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 121
               

               
Conread position:
               
379-505
               

               
Cow position:
               
chr20:35113463-35113333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
380-504
               

               
Cow position:
               
chr20:31148014-31147895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
380-505
               

               
Cow position:
               
chr20:13023551-13023676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
380-505
               

               
Cow position:
               
chr20:21016402-21016280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
388-505
               

               
Cow position:
               
chr20:32866423-32866544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
389-505
               

               
Cow position:
               
chr20:13267511-13267631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
395-504
               

               
Cow position:
               
chr20:15822228-15822120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
398-505
               

               
Cow position:
               
chr20:23850193-23850086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
416-517
               

               
Cow position:
               
chr20:36040101-36039998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               
Show alignments to all cow chromosomes.