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Cow genome map

           
Conread name:
           
Ss1.1-rnca23b_e14.5
        

               
Conread position:
               
75-505
               

               
Cow position:
               
chr25:20069911-20069477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
91-490
               

               
Cow position:
               
chr25:38958127-38957744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 11
               

               
Conread position:
               
93-395
               

               
Cow position:
               
chr25:14157794-14157489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
104-505
               

               
Cow position:
               
chr25:36082028-36081631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 17
               

               
Conread position:
               
108-435
               

               
Cow position:
               
chr25:21893491-21893163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
108-497
               

               
Cow position:
               
chr25:20008291-20007912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
108-499
               

               
Cow position:
               
chr25:14513263-14512878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
147, 13
               

               
Conread position:
               
108-505
               

               
Cow position:
               
chr25:10643159-10643553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
200, 13
               

               
Conread position:
               
112-503
               

               
Cow position:
               
chr25:14791907-14791511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
121-505
               

               
Cow position:
               
chr25:19679498-19679099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
121-505
               

               
Cow position:
               
chr25:24669306-24669673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
122-384
               

               
Cow position:
               
chr25:11432807-11433075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
179, 8
               

               
Conread position:
               
122-436
               

               
Cow position:
               
chr25:32277469-32277778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
218, 15
               

               
Conread position:
               
122-438
               

               
Cow position:
               
chr25:23244859-23245185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
122-456
               

               
Cow position:
               
chr25:7750594-7750256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
122-468
               

               
Cow position:
               
chr25:22179055-22178715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
222, 35
               

               
Conread position:
               
122-497
               

               
Cow position:
               
chr25:4521696-4522054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
122-500
               

               
Cow position:
               
chr25:24573207-24572836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
122-501
               

               
Cow position:
               
chr25:19129999-19129615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 72
               

               
Conread position:
               
122-501
               

               
Cow position:
               
chr25:26524107-26523740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
122-503
               

               
Cow position:
               
chr25:788402-788028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
15, 74
               

               
Conread position:
               
122-503
               

               
Cow position:
               
chr25:15273809-15273449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
122-503
               

               
Cow position:
               
chr25:33550656-33550265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
122-504
               

               
Cow position:
               
chr25:23828985-23829359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
122-504
               

               
Cow position:
               
chr25:41132221-41132597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
20, 15
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr25:7216962-7216585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 15
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr25:7306435-7306055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr25:15715017-15714638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr25:33457874-33457463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
122-527
               

               
Cow position:
               
chr25:18720982-18721371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
122-527
               

               
Cow position:
               
chr25:22315349-22314934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
123-498
               

               
Cow position:
               
chr25:26701164-26700802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 16
               

               
Conread position:
               
123-503
               

               
Cow position:
               
chr25:26087662-26087274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
124-466
               

               
Cow position:
               
chr25:17704882-17704545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
14, 34
               

               
Conread position:
               
124-500
               

               
Cow position:
               
chr25:20023250-20023631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 13
               

               
Conread position:
               
125-331
               

               
Cow position:
               
chr25:26306069-26306272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
125-499
               

               
Cow position:
               
chr25:28187804-28188186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
12, 72
               

               
Conread position:
               
125-505
               

               
Cow position:
               
chr25:5846671-5847049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
127-507
               

               
Cow position:
               
chr25:13569042-13569412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 47
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr25:7581294-7581670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr25:41107892-41107515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
130-303
               

               
Cow position:
               
chr25:13223030-13222862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
133-503
               

               
Cow position:
               
chr25:23917970-23917601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
164, 23
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr25:33256482-33256126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
136-342
               

               
Cow position:
               
chr25:40931398-40931198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 19
               

               
Conread position:
               
136-426
               

               
Cow position:
               
chr25:41150838-41151122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
136-485
               

               
Cow position:
               
chr25:7008035-7007693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
156, 21
               

               
Conread position:
               
136-489
               

               
Cow position:
               
chr25:34170071-34169727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 20
               

               
Conread position:
               
136-490
               

               
Cow position:
               
chr25:36017658-36017311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
161, 32
               

               
Conread position:
               
136-497
               

               
Cow position:
               
chr25:6473962-6474334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
38, 32
               

               
Conread position:
               
136-503
               

               
Cow position:
               
chr25:15254223-15254572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
211, 21
               

               
Conread position:
               
136-503
               

               
Cow position:
               
chr25:22531406-22531046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 21
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr25:16867366-16866989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr25:17658738-17658372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
136-531
               

               
Cow position:
               
chr25:20785460-20785854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
137-504
               

               
Cow position:
               
chr25:22369513-22369151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr25:6682937-6683304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
164, 21
               

               
Conread position:
               
138-505
               

               
Cow position:
               
chr25:21192817-21193186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 18
               

               
Conread position:
               
138-520
               

               
Cow position:
               
chr25:36746324-36746704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
139-505
               

               
Cow position:
               
chr25:21191610-21191244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 19
               

               
Conread position:
               
140-357
               

               
Cow position:
               
chr25:4948083-4947869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
158, 16
               

               
Conread position:
               
142-505
               

               
Cow position:
               
chr25:18564607-18564252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
143-308
               

               
Cow position:
               
chr25:18810465-18810301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
143-395
               

               
Cow position:
               
chr25:9843296-9843043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
151, 51
               

               
Conread position:
               
143-468
               

               
Cow position:
               
chr25:13272688-13272363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
166, 13
               

               
Conread position:
               
143-494
               

               
Cow position:
               
chr25:2624913-2624570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
201, 13
               

               
Conread position:
               
143-498
               

               
Cow position:
               
chr25:7641330-7641690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 51
               

               
Conread position:
               
143-499
               

               
Cow position:
               
chr25:10504223-10504572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
163, 14
               

               
Conread position:
               
143-503
               

               
Cow position:
               
chr25:27531153-27531508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
118, 21
               

               
Conread position:
               
143-505
               

               
Cow position:
               
chr25:11585636-11585275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 14
               

               
Conread position:
               
143-505
               

               
Cow position:
               
chr25:11661698-11662062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
143-505
               

               
Cow position:
               
chr25:12116879-12117229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
192, 57
               

               
Conread position:
               
143-505
               

               
Cow position:
               
chr25:21208855-21209191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
221, 14
               

               
Conread position:
               
144-414
               

               
Cow position:
               
chr25:21668366-21668094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
142, 12
               

               
Conread position:
               
144-426
               

               
Cow position:
               
chr25:26679345-26679066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
200, 50
               

               
Conread position:
               
144-496
               

               
Cow position:
               
chr25:25861232-25861594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
144-498
               

               
Cow position:
               
chr25:61767-61421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
219, 13
               

               
Conread position:
               
144-503
               

               
Cow position:
               
chr25:26238980-26238630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
144-505
               

               
Cow position:
               
chr25:3992898-3992547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
151, 50
               

               
Conread position:
               
144-505
               

               
Cow position:
               
chr25:9989992-9990333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 16
               

               
Conread position:
               
145-505
               

               
Cow position:
               
chr25:30319335-30319692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
145-506
               

               
Cow position:
               
chr25:40321173-40321536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
142, 28
               

               
Conread position:
               
146-447
               

               
Cow position:
               
chr25:4681343-4681048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
156, 33
               

               
Conread position:
               
146-505
               

               
Cow position:
               
chr25:17975261-17975610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
201, 48
               

               
Conread position:
               
147-499
               

               
Cow position:
               
chr25:30279092-30279444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
148-489
               

               
Cow position:
               
chr25:26338573-26338218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
148-502
               

               
Cow position:
               
chr25:8120898-8120535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
148-505
               

               
Cow position:
               
chr25:36762221-36761863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
5, 47
               

               
Conread position:
               
149-498
               

               
Cow position:
               
chr25:38982207-38981875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
195, 45
               

               
Conread position:
               
150-424
               

               
Cow position:
               
chr25:22750894-22751172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
143, 44
               

               
Conread position:
               
150-494
               

               
Cow position:
               
chr25:6961040-6961382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
153, 44
               

               
Conread position:
               
150-505
               

               
Cow position:
               
chr25:20076609-20076251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
145, 8
               

               
Conread position:
               
150-505
               

               
Cow position:
               
chr25:25051264-25051627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
152-504
               

               
Cow position:
               
chr25:17566700-17566345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
153-397
               

               
Cow position:
               
chr25:12509901-12510144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
215, 42
               

               
Conread position:
               
153-505
               

               
Cow position:
               
chr25:1838351-1837997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
156-507
               

               
Cow position:
               
chr25:20461209-20460877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
158-453
               

               
Cow position:
               
chr25:14720849-14720561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
206, 42
               

               
Conread position:
               
158-505
               

               
Cow position:
               
chr25:10156674-10156348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
159-507
               

               
Cow position:
               
chr25:4547614-4547965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 35
               

               
Conread position:
               
160-409
               

               
Cow position:
               
chr25:12609443-12609198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
132, 34
               

               
Conread position:
               
160-479
               

               
Cow position:
               
chr25:26089710-26090029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
135, 34
               

               
Conread position:
               
160-500
               

               
Cow position:
               
chr25:12778438-12778770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
208, 34
               

               
Conread position:
               
160-502
               

               
Cow position:
               
chr25:19478778-19478450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
143, 34
               

               
Conread position:
               
160-509
               

               
Cow position:
               
chr25:2136453-2136105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
167-504
               

               
Cow position:
               
chr25:36036683-36037022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 27
               

               
Conread position:
               
167-505
               

               
Cow position:
               
chr25:21245508-21245849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 27
               

               
Conread position:
               
170-467
               

               
Cow position:
               
chr25:8157408-8157715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
173-505
               

               
Cow position:
               
chr25:33691648-33691311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
129, 24
               

               
Conread position:
               
176-500
               

               
Cow position:
               
chr25:12097930-12097604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
23, 155
               

               
Conread position:
               
176-513
               

               
Cow position:
               
chr25:18988480-18988125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
180-505
               

               
Cow position:
               
chr25:11829840-11830139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
128, 14
               

               
Conread position:
               
180-505
               

               
Cow position:
               
chr25:16319057-16319375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 14
               

               
Conread position:
               
180-531
               

               
Cow position:
               
chr25:21894802-21895156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
130, 14
               

               
Conread position:
               
196-398
               

               
Cow position:
               
chr25:24052035-24051827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
115, 137
               

               
Conread position:
               
196-505
               

               
Cow position:
               
chr25:31230173-31230466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
148, 35
               

               
Conread position:
               
197-413
               

               
Cow position:
               
chr25:6688013-6687799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
197-505
               

               
Cow position:
               
chr25:11131652-11131342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
197-505
               

               
Cow position:
               
chr25:14196931-14196612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
198-505
               

               
Cow position:
               
chr25:11436740-11437045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
107, 167
               

               
Conread position:
               
200-445
               

               
Cow position:
               
chr25:18905950-18905698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
123, 95
               

               
Conread position:
               
200-468
               

               
Cow position:
               
chr25:16714204-16714480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 76
               

               
Conread position:
               
200-500
               

               
Cow position:
               
chr25:38425426-38425127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
119, 84
               

               
Conread position:
               
200-501
               

               
Cow position:
               
chr25:35347968-35347664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
144, 32
               

               
Conread position:
               
200-503
               

               
Cow position:
               
chr25:15377391-15377092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
200-503
               

               
Cow position:
               
chr25:20019938-20020228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
119, 29
               

               
Conread position:
               
200-514
               

               
Cow position:
               
chr25:8576759-8576439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
79, 96
               

               
Conread position:
               
201-457
               

               
Cow position:
               
chr25:15409852-15410106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
201-490
               

               
Cow position:
               
chr25:10217985-10218279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
142, 103
               

               
Conread position:
               
201-498
               

               
Cow position:
               
chr25:5539486-5539185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
201-498
               

               
Cow position:
               
chr25:13380537-13380853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
201-498
               

               
Cow position:
               
chr25:20402645-20402956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
201-498
               

               
Cow position:
               
chr25:23351461-23351159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 36
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr25:6463967-6464270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr25:13709081-13708776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr25:20348933-20348617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
53, 101
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr25:21289409-21289099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr25:33959188-33959501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
64, 276
               

               
Conread position:
               
201-504
               

               
Cow position:
               
chr25:10407350-10407660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr25:12260825-12261137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
82, 112
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr25:12293683-12293994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
54, 67
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr25:16064956-16064654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
95, 215
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr25:16921733-16922037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
146, 98
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr25:18294250-18294557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 68
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr25:23053621-23053313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
143, 94
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr25:25753932-25754239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 94
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr25:27821477-27821168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr25:35612249-35612544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
105, 79
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr25:37594470-37594171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 177
               

               
Conread position:
               
201-527
               

               
Cow position:
               
chr25:3145908-3145579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
143, 106
               

               
Conread position:
               
202-500
               

               
Cow position:
               
chr25:38135813-38135510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
98, 226
               

               
Conread position:
               
202-503
               

               
Cow position:
               
chr25:6947993-6948299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 35
               

               
Conread position:
               
202-505
               

               
Cow position:
               
chr25:21951193-21950883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
58, 143
               

               
Conread position:
               
202-527
               

               
Cow position:
               
chr25:33663842-33664163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
81, 144
               

               
Conread position:
               
203-419
               

               
Cow position:
               
chr25:16570664-16570460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
203-453
               

               
Cow position:
               
chr25:17342520-17342258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
203-504
               

               
Cow position:
               
chr25:5836895-5837208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
61, 163
               

               
Conread position:
               
204-510
               

               
Cow position:
               
chr25:21541616-21541299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
91, 120
               

               
Conread position:
               
205-504
               

               
Cow position:
               
chr25:2194991-2194705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
142, 43
               

               
Conread position:
               
206-395
               

               
Cow position:
               
chr25:7449859-7449675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
138, 84
               

               
Conread position:
               
221-505
               

               
Cow position:
               
chr25:22203645-22203933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
224-505
               

               
Cow position:
               
chr25:1735279-1735559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
120, 69
               

               
Conread position:
               
230-505
               

               
Cow position:
               
chr25:5341688-5341408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
235-497
               

               
Cow position:
               
chr25:2414845-2414595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 118
               

               
Conread position:
               
236-505
               

               
Cow position:
               
chr25:18236340-18236616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 71
               

               
Conread position:
               
237-505
               

               
Cow position:
               
chr25:7801169-7800893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
66, 124
               

               
Conread position:
               
242-506
               

               
Cow position:
               
chr25:35340353-35340088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 89
               

               
Conread position:
               
248-489
               

               
Cow position:
               
chr25:36033455-36033209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
50, 33
               

               
Conread position:
               
249-489
               

               
Cow position:
               
chr25:35625168-35625401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 40
               

               
Conread position:
               
249-505
               

               
Cow position:
               
chr25:5515030-5514764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
48, 258
               

               
Conread position:
               
251-470
               

               
Cow position:
               
chr25:26269923-26270142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
251-490
               

               
Cow position:
               
chr25:10330398-10330630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
251-498
               

               
Cow position:
               
chr25:9642372-9642118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 137
               

               
Conread position:
               
253-505
               

               
Cow position:
               
chr25:448332-448588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
254-449
               

               
Cow position:
               
chr25:18894708-18894910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
254-490
               

               
Cow position:
               
chr25:12239136-12239376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
254-498
               

               
Cow position:
               
chr25:14266507-14266740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
254-500
               

               
Cow position:
               
chr25:16001514-16001758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 39
               

               
Conread position:
               
254-504
               

               
Cow position:
               
chr25:5791789-5792048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr25:20211069-20211329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
49, 80
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr25:30035560-30035305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
254-505
               

               
Cow position:
               
chr25:36535422-36535675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
38, 165
               

               
Conread position:
               
254-506
               

               
Cow position:
               
chr25:38972842-38972589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
255-498
               

               
Cow position:
               
chr25:40388454-40388692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 53
               

               
Conread position:
               
256-466
               

               
Cow position:
               
chr25:14555686-14555469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr25:5755301-5755557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr25:14352311-14352055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr25:29351911-29352167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
256-505
               

               
Cow position:
               
chr25:38910549-38910293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
260-503
               

               
Cow position:
               
chr25:34121079-34121329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
84, 47
               

               
Conread position:
               
261-489
               

               
Cow position:
               
chr25:9396449-9396223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 34
               

               
Conread position:
               
261-501
               

               
Cow position:
               
chr25:7329553-7329305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
261-504
               

               
Cow position:
               
chr25:35345035-35344796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
261-505
               

               
Cow position:
               
chr25:8918272-8918521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
58, 85
               

               
Conread position:
               
263-505
               

               
Cow position:
               
chr25:4002804-4002553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
267-465
               

               
Cow position:
               
chr25:21047319-21047123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
267-481
               

               
Cow position:
               
chr25:12899757-12899536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 130
               

               
Conread position:
               
267-499
               

               
Cow position:
               
chr25:25827469-25827225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
267-499
               

               
Cow position:
               
chr25:36779499-36779258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 213
               

               
Conread position:
               
267-503
               

               
Cow position:
               
chr25:10138092-10137857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
267-505
               

               
Cow position:
               
chr25:31732736-31732979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
268-505
               

               
Cow position:
               
chr25:9023630-9023402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
100, 42
               

               
Conread position:
               
268-505
               

               
Cow position:
               
chr25:15411771-15412013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
268-505
               

               
Cow position:
               
chr25:15694979-15694740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
268-517
               

               
Cow position:
               
chr25:6470217-6470475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 154
               

               
Conread position:
               
271-499
               

               
Cow position:
               
chr25:26654905-26654669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
271-505
               

               
Cow position:
               
chr25:12824023-12824257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
272-466
               

               
Cow position:
               
chr25:20224565-20224364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr25:2510711-2510951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr25:3689412-3689172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr25:8235243-8235483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr25:10895730-10895970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr25:12054553-12054793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr25:12157880-12157640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr25:13062854-13062614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr25:17419180-17418940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr25:17538416-17538656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr25:18090920-18090679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr25:19138570-19138810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr25:22198584-22198344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr25:29524865-29525105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr25:34257985-34257745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr25:35590072-35589832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr25:35602429-35602189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
272-507
               

               
Cow position:
               
chr25:12817368-12817128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 40
               

               
Conread position:
               
272-584
               

               
Cow position:
               
chr25:15470071-15470392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
273-505
               

               
Cow position:
               
chr25:20085274-20085044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
276-505
               

               
Cow position:
               
chr25:8347500-8347266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
17, 128
               

               
Conread position:
               
277-489
               

               
Cow position:
               
chr25:23389290-23389509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
277-504
               

               
Cow position:
               
chr25:13099489-13099722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr25:7386738-7386502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr25:9961185-9961421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr25:12234775-12235001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
92, 22
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr25:17807785-17808020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr25:23600946-23601181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr25:27077055-27076820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr25:36554992-36554762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
278-500
               

               
Cow position:
               
chr25:24452188-24452407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
278-505
               

               
Cow position:
               
chr25:26058572-26058342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
279-505
               

               
Cow position:
               
chr25:5536658-5536891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 28
               

               
Conread position:
               
281-506
               

               
Cow position:
               
chr25:11269215-11269442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
284-505
               

               
Cow position:
               
chr25:1096552-1096334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
285-505
               

               
Cow position:
               
chr25:6891548-6891763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
285-505
               

               
Cow position:
               
chr25:12204451-12204227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 145
               

               
Conread position:
               
288-505
               

               
Cow position:
               
chr25:6424610-6424828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
288-505
               

               
Cow position:
               
chr25:23324382-23324607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
292-505
               

               
Cow position:
               
chr25:10365778-10365995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
293-500
               

               
Cow position:
               
chr25:15286569-15286778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 129
               

               
Conread position:
               
293-505
               

               
Cow position:
               
chr25:22297044-22297260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
11, 149
               

               
Conread position:
               
296-504
               

               
Cow position:
               
chr25:13642340-13642558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
297-505
               

               
Cow position:
               
chr25:25961929-25961721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
300-504
               

               
Cow position:
               
chr25:24008211-24008419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
300-505
               

               
Cow position:
               
chr25:18075639-18075426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
300-505
               

               
Cow position:
               
chr25:20060063-20060274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
300-521
               

               
Cow position:
               
chr25:11139614-11139387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 166
               

               
Conread position:
               
301-504
               

               
Cow position:
               
chr25:11666611-11666414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
302-498
               

               
Cow position:
               
chr25:40957024-40957223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 155
               

               
Conread position:
               
302-499
               

               
Cow position:
               
chr25:15319882-15319683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
314-503
               

               
Cow position:
               
chr25:24405784-24405977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
314-504
               

               
Cow position:
               
chr25:36026960-36026765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
315-496
               

               
Cow position:
               
chr25:6255985-6256172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 156
               

               
Conread position:
               
317-505
               

               
Cow position:
               
chr25:25948450-25948638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 125
               

               
Conread position:
               
319-505
               

               
Cow position:
               
chr25:16400316-16400493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
321-516
               

               
Cow position:
               
chr25:35607778-35607977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
322-529
               

               
Cow position:
               
chr25:12195384-12195594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
22, 123
               

               
Conread position:
               
323-505
               

               
Cow position:
               
chr25:19576502-19576683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
324-498
               

               
Cow position:
               
chr25:32063790-32063606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
324-504
               

               
Cow position:
               
chr25:6003050-6003233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
334-503
               

               
Cow position:
               
chr25:18448771-18448596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
337-497
               

               
Cow position:
               
chr25:16316821-16316662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 96
               

               
Conread position:
               
343-498
               

               
Cow position:
               
chr25:10010798-10010958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
343-501
               

               
Cow position:
               
chr25:10746819-10746661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
345-502
               

               
Cow position:
               
chr25:36120119-36119961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
346-505
               

               
Cow position:
               
chr25:2110994-2110840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
346-505
               

               
Cow position:
               
chr25:17712454-17712291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
346-505
               

               
Cow position:
               
chr25:21266927-21266763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
348-527
               

               
Cow position:
               
chr25:18934957-18935142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
367-489
               

               
Cow position:
               
chr25:19366523-19366647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 87
               

               
Conread position:
               
375-505
               

               
Cow position:
               
chr25:9842891-9842757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 91
               

               
Conread position:
               
377-498
               

               
Cow position:
               
chr25:13566732-13566607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
379-505
               

               
Cow position:
               
chr25:13720656-13720781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 77
               

               
Conread position:
               
394-505
               

               
Cow position:
               
chr25:12174633-12174748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
398-505
               

               
Cow position:
               
chr25:14809179-14809067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
412-504
               

               
Cow position:
               
chr25:33687046-33687138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
412-517
               

               
Cow position:
               
chr25:17475674-17475779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.