Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rnca23b_e14.5
        

               Conread position:
               66-464
               

               Cow position:
               chr6:120487-120079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               281
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               75-505
               

               Cow position:
               chr6:15243061-15242633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               296
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               76-490
               

               Cow position:
               chr6:24004765-24004362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               281
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               37, 43
               

               Conread position:
               78-467
               

               Cow position:
               chr6:26450542-26450154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 40
               

               Conread position:
               78-489
               

               Cow position:
               chr6:53519391-53519808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               47, 25
               

               Conread position:
               78-505
               

               Cow position:
               chr6:8637504-8637074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 14
               

               Conread position:
               81-505
               

               Cow position:
               chr6:36470344-36470763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 11
               

               Conread position:
               91-527
               

               Cow position:
               chr6:55475462-55475023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               105-505
               

               Cow position:
               chr6:17997115-17997516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               274
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               108-439
               

               Cow position:
               chr6:60118341-60118011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               236, 13
               

               Conread position:
               108-493
               

               Cow position:
               chr6:37149385-37149004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               108-499
               

               Cow position:
               chr6:35990040-35990418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               108-500
               

               Cow position:
               chr6:16700453-16700063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               258
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               236, 13
               

               Conread position:
               108-501
               

               Cow position:
               chr6:40774135-40774545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               276
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               29, 14
               

               Conread position:
               108-502
               

               Cow position:
               chr6:6060371-6060755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               108-503
               

               Cow position:
               chr6:21736703-21737081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               262
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               187, 13
               

               Conread position:
               108-503
               

               Cow position:
               chr6:67187880-67187492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               108-504
               

               Cow position:
               chr6:44078714-44078322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               277
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               108-504
               

               Cow position:
               chr6:64432132-64431739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               267
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               108-505
               

               Cow position:
               chr6:8562917-8562515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               276
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               108-529
               

               Cow position:
               chr6:10399709-10400119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               289
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               41, 14
               

               Conread position:
               109-517
               

               Cow position:
               chr6:40713311-40713716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               278
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               112-503
               

               Cow position:
               chr6:56850212-56849819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               112-505
               

               Cow position:
               chr6:8966283-8965889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 9
               

               Conread position:
               112-507
               

               Cow position:
               chr6:67951153-67950756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               113-505
               

               Cow position:
               chr6:28477358-28476981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               6, 18
               

               Conread position:
               115-500
               

               Cow position:
               chr6:53652225-53651845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 14
               

               Conread position:
               116-503
               

               Cow position:
               chr6:5609258-5609639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 11
               

               Conread position:
               121-503
               

               Cow position:
               chr6:28483205-28482816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               275
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               16, 71
               

               Conread position:
               122-355
               

               Cow position:
               chr6:2078629-2078870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 75
               

               Conread position:
               122-386
               

               Cow position:
               chr6:693958-694229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 179
               

               Conread position:
               122-417
               

               Cow position:
               chr6:59603028-59603320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               158, 17
               

               Conread position:
               122-433
               

               Cow position:
               chr6:32287818-32287511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               122-460
               

               Cow position:
               chr6:60740197-60739859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               198, 78
               

               Conread position:
               122-497
               

               Cow position:
               chr6:45690428-45690787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               16, 35
               

               Conread position:
               122-499
               

               Cow position:
               chr6:21456490-21456885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               122-499
               

               Cow position:
               chr6:49421605-49421972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               266
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               20, 15
               

               Conread position:
               122-499
               

               Cow position:
               chr6:63720379-63720004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               173, 15
               

               Conread position:
               122-503
               

               Cow position:
               chr6:611730-611362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               248
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               22, 46
               

               Conread position:
               122-503
               

               Cow position:
               chr6:12928327-12927921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 39
               

               Conread position:
               122-503
               

               Cow position:
               chr6:51581068-51581457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 63
               

               Conread position:
               122-504
               

               Cow position:
               chr6:15300653-15301017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               254
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               122-504
               

               Cow position:
               chr6:53024624-53024998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               179, 15
               

               Conread position:
               122-505
               

               Cow position:
               chr6:4383661-4383292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               266
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               122-505
               

               Cow position:
               chr6:7539760-7539372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 70
               

               Conread position:
               122-505
               

               Cow position:
               chr6:10105793-10106197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 39
               

               Conread position:
               122-505
               

               Cow position:
               chr6:21535227-21534858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               268
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               15, 77
               

               Conread position:
               122-505
               

               Cow position:
               chr6:23696186-23695797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 82
               

               Conread position:
               122-505
               

               Cow position:
               chr6:24468212-24468593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 73
               

               Conread position:
               122-505
               

               Cow position:
               chr6:38771458-38771095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               197, 15
               

               Conread position:
               122-505
               

               Cow position:
               chr6:39358156-39358541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 15
               

               Conread position:
               122-505
               

               Cow position:
               chr6:40032374-40031993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               275
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               122-505
               

               Cow position:
               chr6:46558241-46557855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 60
               

               Conread position:
               122-505
               

               Cow position:
               chr6:61269498-61269129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               268
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               15, 75
               

               Conread position:
               122-507
               

               Cow position:
               chr6:19402032-19401659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               29, 15
               

               Conread position:
               122-507
               

               Cow position:
               chr6:23532834-23532460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               125, 15
               

               Conread position:
               122-526
               

               Cow position:
               chr6:31535386-31535794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               122-537
               

               Cow position:
               chr6:13687629-13688046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               122-548
               

               Cow position:
               chr6:46859983-46860415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 53
               

               Conread position:
               123-378
               

               Cow position:
               chr6:17068466-17068723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               123-475
               

               Cow position:
               chr6:27888533-27888179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               18, 14
               

               Conread position:
               123-489
               

               Cow position:
               chr6:50577704-50577335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               123-505
               

               Cow position:
               chr6:36196391-36196013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               123-514
               

               Cow position:
               chr6:528105-528485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               245, 9
               

               Conread position:
               124-447
               

               Cow position:
               chr6:57571663-57571330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               124-479
               

               Cow position:
               chr6:59104784-59104433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               124-499
               

               Cow position:
               chr6:53460387-53460767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 13
               

               Conread position:
               124-505
               

               Cow position:
               chr6:21111134-21110768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               25, 78
               

               Conread position:
               124-505
               

               Cow position:
               chr6:65871212-65870823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 14
               

               Conread position:
               125-354
               

               Cow position:
               chr6:67643513-67643740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               177, 12
               

               Conread position:
               125-467
               

               Cow position:
               chr6:50984401-50984060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               125-487
               

               Cow position:
               chr6:12669274-12668921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               12, 49
               

               Conread position:
               125-499
               

               Cow position:
               chr6:61515014-61515393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               251
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               149, 12
               

               Conread position:
               125-502
               

               Cow position:
               chr6:2547431-2547045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 12
               

               Conread position:
               125-504
               

               Cow position:
               chr6:19695985-19695607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               250
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               125-505
               

               Cow position:
               chr6:3952697-3952324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               125-505
               

               Cow position:
               chr6:38853480-38853859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               268
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               125-508
               

               Cow position:
               chr6:57546050-57546436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               223, 12
               

               Conread position:
               126-505
               

               Cow position:
               chr6:61631430-61631820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               268
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               129-429
               

               Cow position:
               chr6:62670042-62669745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 46
               

               Conread position:
               129-431
               

               Cow position:
               chr6:25614915-25615227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               88, 71
               

               Conread position:
               130-503
               

               Cow position:
               chr6:26915502-26915131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 28
               

               Conread position:
               133-474
               

               Cow position:
               chr6:54990831-54991172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               152, 24
               

               Conread position:
               133-492
               

               Cow position:
               chr6:47575076-47574717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 17
               

               Conread position:
               133-501
               

               Cow position:
               chr6:9750886-9751237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               235, 17
               

               Conread position:
               134-505
               

               Cow position:
               chr6:54867690-54867310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               259
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               15, 62
               

               Conread position:
               135-490
               

               Cow position:
               chr6:34475390-34475736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 60
               

               Conread position:
               135-505
               

               Cow position:
               chr6:16103030-16103403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               212, 22
               

               Conread position:
               136-383
               

               Cow position:
               chr6:23465866-23466108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               208, 22
               

               Conread position:
               136-437
               

               Cow position:
               chr6:38640400-38640094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               223
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               90, 21
               

               Conread position:
               136-448
               

               Cow position:
               chr6:17313900-17313586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               170, 11
               

               Conread position:
               136-452
               

               Cow position:
               chr6:46282836-46283146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               136-453
               

               Cow position:
               chr6:9219431-9219124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               136-459
               

               Cow position:
               chr6:19264332-19264655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 20
               

               Conread position:
               136-467
               

               Cow position:
               chr6:15243422-15243088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               173, 21
               

               Conread position:
               136-478
               

               Cow position:
               chr6:35993752-35993403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               208, 44
               

               Conread position:
               136-486
               

               Cow position:
               chr6:5113889-5114228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               184, 19
               

               Conread position:
               136-503
               

               Cow position:
               chr6:63298865-63299222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               175, 36
               

               Conread position:
               136-504
               

               Cow position:
               chr6:6401117-6400748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 18
               

               Conread position:
               136-504
               

               Cow position:
               chr6:46465988-46465628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               136-504
               

               Cow position:
               chr6:47339191-47339549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               259
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               136-504
               

               Cow position:
               chr6:67214916-67214542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               153, 13
               

               Conread position:
               136-505
               

               Cow position:
               chr6:15305739-15305385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               10, 66
               

               Conread position:
               136-505
               

               Cow position:
               chr6:44194383-44194746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 21
               

               Conread position:
               136-505
               

               Cow position:
               chr6:51463465-51463817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               6, 23
               

               Conread position:
               136-505
               

               Cow position:
               chr6:55282123-55282490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               258
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               13, 59
               

               Conread position:
               136-519
               

               Cow position:
               chr6:35842826-35842442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 44
               

               Conread position:
               136-527
               

               Cow position:
               chr6:8209437-8209814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               137-404
               

               Cow position:
               chr6:61524039-61524301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               155, 20
               

               Conread position:
               137-489
               

               Cow position:
               chr6:47799459-47799113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               163, 20
               

               Conread position:
               137-500
               

               Cow position:
               chr6:7128237-7128598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               160, 7
               

               Conread position:
               137-503
               

               Cow position:
               chr6:15937685-15938051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               260
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               12, 46
               

               Conread position:
               137-504
               

               Cow position:
               chr6:51675074-51674718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               12, 21
               

               Conread position:
               137-505
               

               Cow position:
               chr6:32867053-32867407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               101, 29
               

               Conread position:
               137-505
               

               Cow position:
               chr6:38441338-38440981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               137-505
               

               Cow position:
               chr6:46571272-46570919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               250
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               207, 19
               

               Conread position:
               138-442
               

               Cow position:
               chr6:43134774-43135082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               138-479
               

               Cow position:
               chr6:8125495-8125157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               138-497
               

               Cow position:
               chr6:10176137-10176497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               138-498
               

               Cow position:
               chr6:29485249-29484897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 18
               

               Conread position:
               138-505
               

               Cow position:
               chr6:14949314-14949682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 58
               

               Conread position:
               138-507
               

               Cow position:
               chr6:36202987-36202625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 64
               

               Conread position:
               138-514
               

               Cow position:
               chr6:52478245-52478638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 20
               

               Conread position:
               141-503
               

               Cow position:
               chr6:16707176-16706808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               161, 53
               

               Conread position:
               142-459
               

               Cow position:
               chr6:58590436-58590119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               145, 52
               

               Conread position:
               142-488
               

               Cow position:
               chr6:25008879-25008530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               90, 37
               

               Conread position:
               142-503
               

               Cow position:
               chr6:31564177-31564534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               251
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               153, 5
               

               Conread position:
               143-348
               

               Cow position:
               chr6:67451211-67451414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               170, 12
               

               Conread position:
               143-489
               

               Cow position:
               chr6:9452610-9452958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 15
               

               Conread position:
               143-498
               

               Cow position:
               chr6:47520215-47519852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 51
               

               Conread position:
               143-499
               

               Cow position:
               chr6:38207332-38207691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               143-505
               

               Cow position:
               chr6:54490575-54490941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               154, 46
               

               Conread position:
               143-507
               

               Cow position:
               chr6:59069456-59069831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               256
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               6, 99
               

               Conread position:
               144-431
               

               Cow position:
               chr6:50976209-50975931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               156, 56
               

               Conread position:
               144-459
               

               Cow position:
               chr6:48112356-48112049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               200, 16
               

               Conread position:
               144-503
               

               Cow position:
               chr6:19681363-19681723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               9, 51
               

               Conread position:
               144-505
               

               Cow position:
               chr6:21869488-21869846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 50
               

               Conread position:
               144-505
               

               Cow position:
               chr6:42961204-42961568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               158, 13
               

               Conread position:
               144-507
               

               Cow position:
               chr6:11169862-11169505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 12
               

               Conread position:
               146-476
               

               Cow position:
               chr6:47355979-47355652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               163, 10
               

               Conread position:
               146-490
               

               Cow position:
               chr6:53932691-53933035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               99, 14
               

               Conread position:
               146-505
               

               Cow position:
               chr6:9008454-9008812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               198, 12
               

               Conread position:
               146-505
               

               Cow position:
               chr6:28148412-28148049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               24, 10
               

               Conread position:
               146-505
               

               Cow position:
               chr6:35181100-35181454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               41, 22
               

               Conread position:
               146-505
               

               Cow position:
               chr6:49398461-49398817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               199, 48
               

               Conread position:
               147-527
               

               Cow position:
               chr6:42565845-42565461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               262
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               197, 33
               

               Conread position:
               148-497
               

               Cow position:
               chr6:12551427-12551074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               23, 47
               

               Conread position:
               148-505
               

               Cow position:
               chr6:13040595-13040251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               220, 8
               

               Conread position:
               149-381
               

               Cow position:
               chr6:22985699-22985935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 28
               

               Conread position:
               149-500
               

               Cow position:
               chr6:25407236-25407588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               38, 29
               

               Conread position:
               149-503
               

               Cow position:
               chr6:7130724-7131070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               100, 45
               

               Conread position:
               150-483
               

               Cow position:
               chr6:52901393-52901062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               106, 50
               

               Conread position:
               150-500
               

               Cow position:
               chr6:17414290-17414647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 44
               

               Conread position:
               150-500
               

               Cow position:
               chr6:28976885-28977225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 44
               

               Conread position:
               150-503
               

               Cow position:
               chr6:6343585-6343227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 44
               

               Conread position:
               150-556
               

               Cow position:
               chr6:35436149-35435753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               147, 50
               

               Conread position:
               151-500
               

               Cow position:
               chr6:12652355-12652010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 7
               

               Conread position:
               151-505
               

               Cow position:
               chr6:36652575-36652221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               142, 29
               

               Conread position:
               151-505
               

               Cow position:
               chr6:38218819-38218471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 7
               

               Conread position:
               151-505
               

               Cow position:
               chr6:38641645-38641297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 9
               

               Conread position:
               152-408
               

               Cow position:
               chr6:58597352-58597608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               152-456
               

               Cow position:
               chr6:4691823-4692136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               152-505
               

               Cow position:
               chr6:63047745-63047375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               130, 42
               

               Conread position:
               152-505
               

               Cow position:
               chr6:66131457-66131107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               166, 27
               

               Conread position:
               153-505
               

               Cow position:
               chr6:5302268-5302605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               191, 41
               

               Conread position:
               156-508
               

               Cow position:
               chr6:8787888-8788241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               150, 38
               

               Conread position:
               157-505
               

               Cow position:
               chr6:32122056-32121710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 31
               

               Conread position:
               158-497
               

               Cow position:
               chr6:4864400-4864733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               156, 36
               

               Conread position:
               158-502
               

               Cow position:
               chr6:24031523-24031177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               128, 36
               

               Conread position:
               160-408
               

               Cow position:
               chr6:7119474-7119714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               159, 40
               

               Conread position:
               160-436
               

               Cow position:
               chr6:28999795-29000058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               70, 13
               

               Conread position:
               160-500
               

               Cow position:
               chr6:16423846-16423503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 34
               

               Conread position:
               160-506
               

               Cow position:
               chr6:60350147-60350501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 34
               

               Conread position:
               161-505
               

               Cow position:
               chr6:11033957-11034308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               183, 146
               

               Conread position:
               162-503
               

               Cow position:
               chr6:323161-323509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               24, 10
               

               Conread position:
               167-400
               

               Cow position:
               chr6:66375195-66375426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               177, 27
               

               Conread position:
               167-466
               

               Cow position:
               chr6:43998867-43999171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               24, 13
               

               Conread position:
               167-471
               

               Cow position:
               chr6:47640294-47640604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               138, 27
               

               Conread position:
               167-489
               

               Cow position:
               chr6:35613279-35613599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               167-505
               

               Cow position:
               chr6:20097821-20098165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 27
               

               Conread position:
               167-527
               

               Cow position:
               chr6:31526184-31525824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               103, 27
               

               Conread position:
               169-512
               

               Cow position:
               chr6:37634932-37634581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               169-527
               

               Cow position:
               chr6:14958204-14958570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               62, 25
               

               Conread position:
               173-488
               

               Cow position:
               chr6:1703937-1703630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               22, 64
               

               Conread position:
               176-489
               

               Cow position:
               chr6:30974175-30973855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               21, 14
               

               Conread position:
               176-505
               

               Cow position:
               chr6:130035-130365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 9
               

               Conread position:
               178-486
               

               Cow position:
               chr6:26909746-26910051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               169, 21
               

               Conread position:
               178-502
               

               Cow position:
               chr6:46865465-46865791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               9, 13
               

               Conread position:
               179-503
               

               Cow position:
               chr6:52562054-52562373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               54, 15
               

               Conread position:
               180-487
               

               Cow position:
               chr6:60057530-60057839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               177, 14
               

               Conread position:
               180-499
               

               Cow position:
               chr6:34196024-34196344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               180-503
               

               Cow position:
               chr6:7189994-7190318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               139, 14
               

               Conread position:
               180-538
               

               Cow position:
               chr6:23247841-23248199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 14
               

               Conread position:
               181-507
               

               Cow position:
               chr6:899169-899487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 13
               

               Conread position:
               188-505
               

               Cow position:
               chr6:12338112-12337784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               103, 320
               

               Conread position:
               197-368
               

               Cow position:
               chr6:60468348-60468173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               108, 97
               

               Conread position:
               197-459
               

               Cow position:
               chr6:61608622-61608352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               197-482
               

               Cow position:
               chr6:1499753-1499460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               98, 89
               

               Conread position:
               197-488
               

               Cow position:
               chr6:63251813-63252107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               147, 102
               

               Conread position:
               197-497
               

               Cow position:
               chr6:28318507-28318216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               58, 40
               

               Conread position:
               197-504
               

               Cow position:
               chr6:18048914-18049225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               145, 226
               

               Conread position:
               197-504
               

               Cow position:
               chr6:26728422-26728726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               150, 74
               

               Conread position:
               197-505
               

               Cow position:
               chr6:6063184-6063480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               151, 107
               

               Conread position:
               197-505
               

               Cow position:
               chr6:10695970-10695668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               147, 11
               

               Conread position:
               197-505
               

               Cow position:
               chr6:21231634-21231335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               197-505
               

               Cow position:
               chr6:56843264-56842959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               83, 32
               

               Conread position:
               197-505
               

               Cow position:
               chr6:57164539-57164229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               113, 250
               

               Conread position:
               198-446
               

               Cow position:
               chr6:38610077-38609826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               121, 104
               

               Conread position:
               198-505
               

               Cow position:
               chr6:52248021-52248334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               19, 106
               

               Conread position:
               200-489
               

               Cow position:
               chr6:17090706-17090410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               94, 51
               

               Conread position:
               200-503
               

               Cow position:
               chr6:58074155-58073846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               91, 42
               

               Conread position:
               200-512
               

               Cow position:
               chr6:1886560-1886871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               105, 43
               

               Conread position:
               201-449
               

               Cow position:
               chr6:16316422-16316161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               22, 225
               

               Conread position:
               201-452
               

               Cow position:
               chr6:54036037-54036283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               143, 66
               

               Conread position:
               201-463
               

               Cow position:
               chr6:77810-78071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               143, 98
               

               Conread position:
               201-464
               

               Cow position:
               chr6:55763959-55763694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               119, 49
               

               Conread position:
               201-468
               

               Cow position:
               chr6:60783976-60783706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               113, 223
               

               Conread position:
               201-476
               

               Cow position:
               chr6:17333947-17334229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               201-478
               

               Cow position:
               chr6:60819619-60819341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               143, 88
               

               Conread position:
               201-479
               

               Cow position:
               chr6:59798753-59798493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               162, 46
               

               Conread position:
               201-482
               

               Cow position:
               chr6:54936685-54936399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               142, 95
               

               Conread position:
               201-489
               

               Cow position:
               chr6:51893394-51893690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               77, 66
               

               Conread position:
               201-489
               

               Cow position:
               chr6:52412965-52412669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               143, 65
               

               Conread position:
               201-499
               

               Cow position:
               chr6:457281-456991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               118, 46
               

               Conread position:
               201-499
               

               Cow position:
               chr6:18447412-18447704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               47, 29
               

               Conread position:
               201-499
               

               Cow position:
               chr6:22502805-22503118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               111, 92
               

               Conread position:
               201-501
               

               Cow position:
               chr6:60474236-60473938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               52, 67
               

               Conread position:
               201-502
               

               Cow position:
               chr6:12091887-12092182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               72, 62
               

               Conread position:
               201-502
               

               Cow position:
               chr6:54701647-54701342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               46, 98
               

               Conread position:
               201-503
               

               Cow position:
               chr6:561733-561419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               44, 98
               

               Conread position:
               201-503
               

               Cow position:
               chr6:57384617-57384321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               93, 30
               

               Conread position:
               201-504
               

               Cow position:
               chr6:67456824-67456503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               201-505
               

               Cow position:
               chr6:445429-445110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               201-505
               

               Cow position:
               chr6:1770092-1770396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               143, 164
               

               Conread position:
               201-505
               

               Cow position:
               chr6:5095436-5095751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               41, 97
               

               Conread position:
               201-505
               

               Cow position:
               chr6:14696259-14696573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               16, 102
               

               Conread position:
               201-505
               

               Cow position:
               chr6:29210601-29210300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               46, 63
               

               Conread position:
               201-505
               

               Cow position:
               chr6:31261100-31260786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               119, 103
               

               Conread position:
               201-505
               

               Cow position:
               chr6:45606352-45606649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 100
               

               Conread position:
               201-505
               

               Cow position:
               chr6:48282098-48281794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               93, 113
               

               Conread position:
               201-505
               

               Cow position:
               chr6:50090748-50090439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               96, 143
               

               Conread position:
               201-505
               

               Cow position:
               chr6:51835505-51835199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               102, 52
               

               Conread position:
               201-505
               

               Cow position:
               chr6:53178735-53178439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               201-505
               

               Cow position:
               chr6:53401462-53401168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               94, 7
               

               Conread position:
               201-505
               

               Cow position:
               chr6:54368798-54369100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               143, 92
               

               Conread position:
               201-505
               

               Cow position:
               chr6:54430936-54430618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               52, 67
               

               Conread position:
               201-505
               

               Cow position:
               chr6:55040108-55040418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               32, 37
               

               Conread position:
               201-505
               

               Cow position:
               chr6:60442515-60442218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               144, 49
               

               Conread position:
               201-505
               

               Cow position:
               chr6:60859195-60859507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               140, 67
               

               Conread position:
               201-505
               

               Cow position:
               chr6:61113873-61113549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               201-505
               

               Cow position:
               chr6:63272505-63272814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               112, 94
               

               Conread position:
               201-506
               

               Cow position:
               chr6:32126161-32125865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               208, 7
               

               Conread position:
               201-507
               

               Cow position:
               chr6:65702307-65702604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               159, 62
               

               Conread position:
               201-522
               

               Cow position:
               chr6:48567246-48567559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               92, 49
               

               Conread position:
               202-499
               

               Cow position:
               chr6:7989310-7989608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               44, 105
               

               Conread position:
               202-504
               

               Cow position:
               chr6:52430917-52431232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               43, 121
               

               Conread position:
               202-531
               

               Cow position:
               chr6:20157438-20157095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               100, 92
               

               Conread position:
               203-466
               

               Cow position:
               chr6:12542827-12543095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               96, 7
               

               Conread position:
               203-499
               

               Cow position:
               chr6:37467436-37467734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               12, 62
               

               Conread position:
               203-504
               

               Cow position:
               chr6:54365224-54365522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               94, 214
               

               Conread position:
               203-505
               

               Cow position:
               chr6:18988312-18988016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               142, 36
               

               Conread position:
               204-500
               

               Cow position:
               chr6:47305444-47305143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               100, 140
               

               Conread position:
               205-456
               

               Cow position:
               chr6:63093813-63094081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               35, 67
               

               Conread position:
               205-505
               

               Cow position:
               chr6:48170040-48169744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               139, 88
               

               Conread position:
               207-505
               

               Cow position:
               chr6:56376248-56376548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               82, 233
               

               Conread position:
               208-487
               

               Cow position:
               chr6:67968511-67968797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               102, 159
               

               Conread position:
               209-467
               

               Cow position:
               chr6:59109043-59108779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               110, 90
               

               Conread position:
               211-490
               

               Cow position:
               chr6:1944809-1944540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               92, 39
               

               Conread position:
               214-502
               

               Cow position:
               chr6:24962238-24961947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               39, 132
               

               Conread position:
               215-505
               

               Cow position:
               chr6:11192372-11192653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               84, 164
               

               Conread position:
               230-505
               

               Cow position:
               chr6:21542400-21542119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               231-426
               

               Cow position:
               chr6:37376438-37376643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               231-505
               

               Cow position:
               chr6:68049507-68049235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               137, 62
               

               Conread position:
               236-490
               

               Cow position:
               chr6:49410626-49410875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               108, 79
               

               Conread position:
               239-467
               

               Cow position:
               chr6:56912775-56912540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               105, 68
               

               Conread position:
               245-505
               

               Cow position:
               chr6:6460604-6460341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 53
               

               Conread position:
               249-483
               

               Cow position:
               chr6:57274525-57274290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               54, 66
               

               Conread position:
               249-489
               

               Cow position:
               chr6:5957970-5958206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               165, 44
               

               Conread position:
               249-505
               

               Cow position:
               chr6:6614495-6614232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               95, 57
               

               Conread position:
               249-505
               

               Cow position:
               chr6:13741759-13741495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               99, 53
               

               Conread position:
               250-505
               

               Cow position:
               chr6:46161474-46161725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               128, 44
               

               Conread position:
               251-504
               

               Cow position:
               chr6:47150848-47150579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               251-505
               

               Cow position:
               chr6:9323205-9322958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               105, 60
               

               Conread position:
               251-505
               

               Cow position:
               chr6:34031717-34031467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               96, 55
               

               Conread position:
               253-503
               

               Cow position:
               chr6:60456883-60456631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               55, 95
               

               Conread position:
               254-497
               

               Cow position:
               chr6:60239342-60239585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               93, 39
               

               Conread position:
               254-497
               

               Cow position:
               chr6:62479107-62479359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               254-500
               

               Cow position:
               chr6:37199474-37199741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               254-500
               

               Cow position:
               chr6:53731577-53731325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               254-500
               

               Cow position:
               chr6:62924945-62925189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               90, 55
               

               Conread position:
               254-505
               

               Cow position:
               chr6:25773332-25773582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               59, 100
               

               Conread position:
               254-505
               

               Cow position:
               chr6:37217825-37217567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 53
               

               Conread position:
               254-505
               

               Cow position:
               chr6:61137428-61137164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               59, 129
               

               Conread position:
               254-574
               

               Cow position:
               chr6:62325045-62324722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               39, 60
               

               Conread position:
               255-503
               

               Cow position:
               chr6:24223102-24223360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               255-505
               

               Cow position:
               chr6:13592761-13592509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               53, 151
               

               Conread position:
               255-521
               

               Cow position:
               chr6:52025598-52025872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               256-466
               

               Cow position:
               chr6:2577893-2577676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-466
               

               Cow position:
               chr6:43050214-43049996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-490
               

               Cow position:
               chr6:56888608-56888368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-505
               

               Cow position:
               chr6:2898967-2898711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-505
               

               Cow position:
               chr6:14198849-14198593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 55
               

               Conread position:
               256-505
               

               Cow position:
               chr6:14388521-14388777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               87, 51
               

               Conread position:
               256-505
               

               Cow position:
               chr6:15881620-15881875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-505
               

               Cow position:
               chr6:17101035-17101291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-505
               

               Cow position:
               chr6:17934971-17935227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-505
               

               Cow position:
               chr6:25096079-25095823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-505
               

               Cow position:
               chr6:28674671-28674927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-505
               

               Cow position:
               chr6:37737125-37736869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-505
               

               Cow position:
               chr6:38916834-38917090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-505
               

               Cow position:
               chr6:43604826-43604570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-505
               

               Cow position:
               chr6:43896617-43896873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-505
               

               Cow position:
               chr6:45695066-45694810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-505
               

               Cow position:
               chr6:45764916-45765172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-505
               

               Cow position:
               chr6:46638237-46637981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-505
               

               Cow position:
               chr6:52021799-52022053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               88, 47
               

               Conread position:
               256-505
               

               Cow position:
               chr6:52463081-52462825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 54
               

               Conread position:
               256-505
               

               Cow position:
               chr6:53345841-53345595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               52, 39
               

               Conread position:
               256-505
               

               Cow position:
               chr6:57795842-57796098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-505
               

               Cow position:
               chr6:59052623-59052367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               88, 55
               

               Conread position:
               256-505
               

               Cow position:
               chr6:59835283-59835027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 55
               

               Conread position:
               256-505
               

               Cow position:
               chr6:65943812-65943556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               256-505
               

               Cow position:
               chr6:68870724-68870980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               259-505
               

               Cow position:
               chr6:61130430-61130683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               54, 5
               

               Conread position:
               260-483
               

               Cow position:
               chr6:18968733-18968952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               59, 35
               

               Conread position:
               261-499
               

               Cow position:
               chr6:44099133-44098889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               50, 32
               

               Conread position:
               261-502
               

               Cow position:
               chr6:416152-415897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               34, 246
               

               Conread position:
               261-505
               

               Cow position:
               chr6:48344379-48344127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               22, 40
               

               Conread position:
               261-507
               

               Cow position:
               chr6:49685631-49685382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               58, 135
               

               Conread position:
               261-527
               

               Cow position:
               chr6:642520-642802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               83, 44
               

               Conread position:
               261-531
               

               Cow position:
               chr6:49002686-49002951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               52, 38
               

               Conread position:
               262-499
               

               Cow position:
               chr6:10254286-10254045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               49, 22
               

               Conread position:
               262-502
               

               Cow position:
               chr6:54294147-54293913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               85, 33
               

               Conread position:
               262-507
               

               Cow position:
               chr6:20230781-20231028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               22, 159
               

               Conread position:
               264-488
               

               Cow position:
               chr6:47989215-47989002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 29
               

               Conread position:
               264-506
               

               Cow position:
               chr6:64449433-64449190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               80, 29
               

               Conread position:
               264-522
               

               Cow position:
               chr6:58076273-58076008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               49, 31
               

               Conread position:
               267-450
               

               Cow position:
               chr6:603136-602947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 66
               

               Conread position:
               267-473
               

               Cow position:
               chr6:11246806-11246595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 174
               

               Conread position:
               267-489
               

               Cow position:
               chr6:8804489-8804713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 149
               

               Conread position:
               267-499
               

               Cow position:
               chr6:16411231-16411000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               77, 142
               

               Conread position:
               267-499
               

               Cow position:
               chr6:34076069-34075824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               28, 184
               

               Conread position:
               267-505
               

               Cow position:
               chr6:24515158-24515394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               101, 32
               

               Conread position:
               267-505
               

               Cow position:
               chr6:47540572-47540325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               33, 93
               

               Conread position:
               268-437
               

               Cow position:
               chr6:57299054-57298883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               268-475
               

               Cow position:
               chr6:54288111-54287909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               268-484
               

               Cow position:
               chr6:3978623-3978847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               23, 44
               

               Conread position:
               268-497
               

               Cow position:
               chr6:607300-607069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               101, 77
               

               Conread position:
               268-503
               

               Cow position:
               chr6:5445662-5445430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               35, 80
               

               Conread position:
               268-505
               

               Cow position:
               chr6:10535746-10535990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               76, 39
               

               Conread position:
               268-505
               

               Cow position:
               chr6:13619428-13619672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 39
               

               Conread position:
               268-505
               

               Cow position:
               chr6:32054495-32054739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 39
               

               Conread position:
               270-505
               

               Cow position:
               chr6:6098245-6098483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               19, 143
               

               Conread position:
               271-504
               

               Cow position:
               chr6:41733662-41733427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               73, 51
               

               Conread position:
               271-505
               

               Cow position:
               chr6:54884867-54885114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               271-517
               

               Cow position:
               chr6:48187547-48187794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               73, 23
               

               Conread position:
               272-466
               

               Cow position:
               chr6:6966710-6966911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-466
               

               Cow position:
               chr6:26719866-26720067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-480
               

               Cow position:
               chr6:44147718-44147504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-496
               

               Cow position:
               chr6:8187485-8187711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               96, 21
               

               Conread position:
               272-505
               

               Cow position:
               chr6:13531853-13531613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-505
               

               Cow position:
               chr6:14225156-14225394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-505
               

               Cow position:
               chr6:14886638-14886878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-505
               

               Cow position:
               chr6:16738054-16737820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               72, 27
               

               Conread position:
               272-505
               

               Cow position:
               chr6:20174571-20174331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-505
               

               Cow position:
               chr6:20580590-20580830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-505
               

               Cow position:
               chr6:25347731-25347971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-505
               

               Cow position:
               chr6:25376448-25376207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               72, 39
               

               Conread position:
               272-505
               

               Cow position:
               chr6:27939966-27939726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-505
               

               Cow position:
               chr6:36299139-36299379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-505
               

               Cow position:
               chr6:40710564-40710324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-505
               

               Cow position:
               chr6:41622672-41622912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-505
               

               Cow position:
               chr6:41798266-41798506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-505
               

               Cow position:
               chr6:43921818-43921585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-505
               

               Cow position:
               chr6:45976688-45976448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-505
               

               Cow position:
               chr6:48290981-48290741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-505
               

               Cow position:
               chr6:62418491-62418731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-505
               

               Cow position:
               chr6:65838835-65839075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               272-506
               

               Cow position:
               chr6:41034101-41033861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 23
               

               Conread position:
               272-507
               

               Cow position:
               chr6:7449684-7449442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               273-498
               

               Cow position:
               chr6:53711149-53710922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               277-461
               

               Cow position:
               chr6:31847195-31847378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 46
               

               Conread position:
               277-465
               

               Cow position:
               chr6:633327-633522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               277-503
               

               Cow position:
               chr6:46400383-46400604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               67, 20
               

               Conread position:
               277-505
               

               Cow position:
               chr6:1911352-1911117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               67, 30
               

               Conread position:
               277-505
               

               Cow position:
               chr6:18502630-18502865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               67, 34
               

               Conread position:
               277-505
               

               Cow position:
               chr6:24652164-24652384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               39, 17
               

               Conread position:
               277-505
               

               Cow position:
               chr6:33489051-33489286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               67, 30
               

               Conread position:
               277-505
               

               Cow position:
               chr6:36259138-36258903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               67, 30
               

               Conread position:
               277-505
               

               Cow position:
               chr6:52482529-52482294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               67, 30
               

               Conread position:
               277-505
               

               Cow position:
               chr6:53271838-53271603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               277-505
               

               Cow position:
               chr6:62038574-62038340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               67, 30
               

               Conread position:
               277-506
               

               Cow position:
               chr6:67544266-67544494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               278-501
               

               Cow position:
               chr6:11637727-11637945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               90, 17
               

               Conread position:
               279-505
               

               Cow position:
               chr6:11402501-11402268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               65, 28
               

               Conread position:
               284-506
               

               Cow position:
               chr6:69500346-69500128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 14
               

               Conread position:
               287-505
               

               Cow position:
               chr6:48425298-48425522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 139
               

               Conread position:
               287-505
               

               Cow position:
               chr6:58439981-58439767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               77, 58
               

               Conread position:
               288-502
               

               Cow position:
               chr6:53138901-53139127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               289-503
               

               Cow position:
               chr6:33277064-33276840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               13, 177
               

               Conread position:
               289-503
               

               Cow position:
               chr6:66433958-66433749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 5
               

               Conread position:
               289-505
               

               Cow position:
               chr6:33863780-33863555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               289-505
               

               Cow position:
               chr6:35471504-35471727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               55, 18
               

               Conread position:
               292-504
               

               Cow position:
               chr6:59620685-59620469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               293-499
               

               Cow position:
               chr6:58732295-58732509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 12
               

               Conread position:
               293-504
               

               Cow position:
               chr6:44377285-44377066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 166
               

               Conread position:
               293-505
               

               Cow position:
               chr6:12387311-12387524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               57, 50
               

               Conread position:
               293-505
               

               Cow position:
               chr6:54807243-54807022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               294-505
               

               Cow position:
               chr6:4079374-4079584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               294-506
               

               Cow position:
               chr6:33302422-33302208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               295-505
               

               Cow position:
               chr6:8318149-8318367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               295-505
               

               Cow position:
               chr6:32915915-32916121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               49, 13
               

               Conread position:
               296-506
               

               Cow position:
               chr6:50445749-50445961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               48, 197
               

               Conread position:
               297-505
               

               Cow position:
               chr6:40138708-40138906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               47, 7
               

               Conread position:
               298-489
               

               Cow position:
               chr6:37246421-37246615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               114, 52
               

               Conread position:
               298-505
               

               Cow position:
               chr6:39994453-39994662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               298-528
               

               Cow position:
               chr6:2896757-2896530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               70, 37
               

               Conread position:
               299-505
               

               Cow position:
               chr6:12500867-12500659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               300-489
               

               Cow position:
               chr6:6227024-6226839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               115, 10
               

               Conread position:
               300-496
               

               Cow position:
               chr6:19329748-19329949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               44, 62
               

               Conread position:
               300-503
               

               Cow position:
               chr6:14201708-14201499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               46, 62
               

               Conread position:
               300-505
               

               Cow position:
               chr6:242820-242613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 122
               

               Conread position:
               300-505
               

               Cow position:
               chr6:2607622-2607412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               44, 82
               

               Conread position:
               300-505
               

               Cow position:
               chr6:7103223-7103438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 12
               

               Conread position:
               300-505
               

               Cow position:
               chr6:10332083-10332297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               44, 102
               

               Conread position:
               300-505
               

               Cow position:
               chr6:29077736-29077528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               300-505
               

               Cow position:
               chr6:45160286-45160492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               19, 120
               

               Conread position:
               300-505
               

               Cow position:
               chr6:50746993-50746780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               300-505
               

               Cow position:
               chr6:65676261-65676056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               115, 44
               

               Conread position:
               300-505
               

               Cow position:
               chr6:65711832-65711626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               301-501
               

               Cow position:
               chr6:15922992-15923196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               301-505
               

               Cow position:
               chr6:24902138-24902342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               85, 73
               

               Conread position:
               303-505
               

               Cow position:
               chr6:54864666-54864867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               42, 117
               

               Conread position:
               304-505
               

               Cow position:
               chr6:66087955-66087754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               44, 39
               

               Conread position:
               305-505
               

               Cow position:
               chr6:2013021-2012818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               307-505
               

               Cow position:
               chr6:61575609-61575403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               37, 183
               

               Conread position:
               311-505
               

               Cow position:
               chr6:66453795-66453600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 23
               

               Conread position:
               312-499
               

               Cow position:
               chr6:10605683-10605490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               32, 63
               

               Conread position:
               314-505
               

               Cow position:
               chr6:6264634-6264443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               60, 107
               

               Conread position:
               314-505
               

               Cow position:
               chr6:24327148-24327336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               30, 48
               

               Conread position:
               321-504
               

               Cow position:
               chr6:9026504-9026317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               321-504
               

               Cow position:
               chr6:50271111-50271294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 13
               

               Conread position:
               322-478
               

               Cow position:
               chr6:18904356-18904517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               322-505
               

               Cow position:
               chr6:389155-388970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               22, 146
               

               Conread position:
               324-505
               

               Cow position:
               chr6:7694365-7694554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               21, 144
               

               Conread position:
               329-500
               

               Cow position:
               chr6:59015580-59015757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 82
               

               Conread position:
               333-500
               

               Cow position:
               chr6:33917877-33918047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               335-499
               

               Cow position:
               chr6:20605908-20605738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 51
               

               Conread position:
               341-505
               

               Cow position:
               chr6:40264236-40264398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 76
               

               Conread position:
               342-505
               

               Cow position:
               chr6:46245353-46245524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               342-606
               

               Cow position:
               chr6:14850750-14851015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               5, 71
               

               Conread position:
               345-503
               

               Cow position:
               chr6:37603483-37603324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               345-503
               

               Cow position:
               chr6:65862648-65862487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               41, 15
               

               Conread position:
               346-500
               

               Cow position:
               chr6:41823862-41824022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               346-504
               

               Cow position:
               chr6:88945-89109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               346-504
               

               Cow position:
               chr6:42931146-42931311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               346-505
               

               Cow position:
               chr6:9375407-9375575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               346-505
               

               Cow position:
               chr6:12623429-12623270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               66, 16
               

               Conread position:
               346-505
               

               Cow position:
               chr6:28559383-28559214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 159
               

               Conread position:
               346-505
               

               Cow position:
               chr6:46667071-46666903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 123
               

               Conread position:
               346-505
               

               Cow position:
               chr6:51398760-51398600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               22, 11
               

               Conread position:
               346-505
               

               Cow position:
               chr6:54140769-54140613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               22, 69
               

               Conread position:
               346-505
               

               Cow position:
               chr6:59301861-59302026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               347-500
               

               Cow position:
               chr6:36011648-36011498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               348-502
               

               Cow position:
               chr6:55607855-55608004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 56
               

               Conread position:
               348-506
               

               Cow position:
               chr6:20329982-20329819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               348-527
               

               Cow position:
               chr6:34235477-34235658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 86
               

               Conread position:
               349-498
               

               Cow position:
               chr6:1002277-1002428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               349-500
               

               Cow position:
               chr6:31928221-31928079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 54
               

               Conread position:
               350-532
               

               Cow position:
               chr6:17067863-17068049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 149
               

               Conread position:
               357-505
               

               Cow position:
               chr6:32024390-32024539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               362-505
               

               Cow position:
               chr6:60018008-60017867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               52, 76
               

               Conread position:
               365-506
               

               Cow position:
               chr6:60467963-60467826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               367-502
               

               Cow position:
               chr6:3719065-3719204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               367-527
               

               Cow position:
               chr6:22986052-22986212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               44, 28
               

               Conread position:
               368-505
               

               Cow position:
               chr6:26837451-26837587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               377-499
               

               Cow position:
               chr6:12116123-12116248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               35, 114
               

               Conread position:
               379-503
               

               Cow position:
               chr6:11830097-11829967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               379-532
               

               Cow position:
               chr6:21311829-21311988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               388-500
               

               Cow position:
               chr6:20929787-20929902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 109
               

               Conread position:
               388-505
               

               Cow position:
               chr6:7801449-7801566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 109
               

               Conread position:
               389-499
               

               Cow position:
               chr6:17245919-17246032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 80
               

               Conread position:
               399-507
               

               Cow position:
               chr6:6117644-6117752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               402-505
               

               Cow position:
               chr6:65846546-65846648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               412-505
               

               Cow position:
               chr6:5673121-5673028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               79
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               418-506
               

               Cow position:
               chr6:3592009-3591921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               78
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               505-636
               

               Cow position:
               chr6:35600966-35600826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               47, 130
               
Show alignments to all cow chromosomes.
Conread position:	66-464
Cow position:	chr6:120487-120079 (view UCSC Genome Browser custom track)
Alignm length:	418
Alignm identity:	281
Alignm E-value:	6e-36
Alignm gaps (pig, cow):	16, 28
Conread position:	75-505
Cow position:	chr6:15243061-15242633 (view UCSC Genome Browser custom track)
Alignm length:	442
Alignm identity:	296
Alignm E-value:	1.00053e-42
Alignm gaps (pig, cow):	63, 17
Conread position:	76-490
Cow position:	chr6:24004765-24004362 (view UCSC Genome Browser custom track)
Alignm length:	420
Alignm identity:	281
Alignm E-value:	4.00001e-41
Alignm gaps (pig, cow):	37, 43
Conread position:	78-467
Cow position:	chr6:26450542-26450154 (view UCSC Genome Browser custom track)
Alignm length:	402
Alignm identity:	263
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	52, 40
Conread position:	78-489
Cow position:	chr6:53519391-53519808 (view UCSC Genome Browser custom track)
Alignm length:	424
Alignm identity:	274
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	47, 25
Conread position:	78-505
Cow position:	chr6:8637504-8637074 (view UCSC Genome Browser custom track)
Alignm length:	438
Alignm identity:	300
Alignm E-value:	0
Alignm gaps (pig, cow):	61, 14
Conread position:	81-505
Cow position:	chr6:36470344-36470763 (view UCSC Genome Browser custom track)
Alignm length:	436
Alignm identity:	300
Alignm E-value:	0
Alignm gaps (pig, cow):	24, 11
Conread position:	91-527
Cow position:	chr6:55475462-55475023 (view UCSC Genome Browser custom track)
Alignm length:	450
Alignm identity:	290
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	49, 11
Conread position:	105-505
Cow position:	chr6:17997115-17997516 (view UCSC Genome Browser custom track)
Alignm length:	412
Alignm identity:	274
Alignm E-value:	9e-39
Alignm gaps (pig, cow):	37, 16
Conread position:	108-439
Cow position:	chr6:60118341-60118011 (view UCSC Genome Browser custom track)
Alignm length:	339
Alignm identity:	224
Alignm E-value:	3e-30
Alignm gaps (pig, cow):	236, 13
Conread position:	108-493
Cow position:	chr6:37149385-37149004 (view UCSC Genome Browser custom track)
Alignm length:	392
Alignm identity:	270
Alignm E-value:	0
Alignm gaps (pig, cow):	29, 17
Conread position:	108-499
Cow position:	chr6:35990040-35990418 (view UCSC Genome Browser custom track)
Alignm length:	397
Alignm identity:	259
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	28, 13
Conread position:	108-500
Cow position:	chr6:16700453-16700063 (view UCSC Genome Browser custom track)
Alignm length:	402
Alignm identity:	258
Alignm E-value:	9e-29
Alignm gaps (pig, cow):	236, 13
Conread position:	108-501
Cow position:	chr6:40774135-40774545 (view UCSC Genome Browser custom track)
Alignm length:	420
Alignm identity:	276
Alignm E-value:	8e-28
Alignm gaps (pig, cow):	29, 14
Conread position:	108-502
Cow position:	chr6:6060371-6060755 (view UCSC Genome Browser custom track)
Alignm length:	403
Alignm identity:	266
Alignm E-value:	4e-31
Alignm gaps (pig, cow):	29, 13
Conread position:	108-503
Cow position:	chr6:21736703-21737081 (view UCSC Genome Browser custom track)
Alignm length:	402
Alignm identity:	262
Alignm E-value:	7e-26
Alignm gaps (pig, cow):	187, 13
Conread position:	108-504
Cow position:	chr6:44078714-44078322 (view UCSC Genome Browser custom track)
Alignm length:	405
Alignm identity:	277
Alignm E-value:	5.04467e-44
Alignm gaps (pig, cow):	31, 13
Conread position:	108-505
Cow position:	chr6:8562917-8562515 (view UCSC Genome Browser custom track)
Alignm length:	412
Alignm identity:	276
Alignm E-value:	9e-39
Alignm gaps (pig, cow):	29, 13
Conread position:	108-529
Cow position:	chr6:10399709-10400119 (view UCSC Genome Browser custom track)
Alignm length:	429
Alignm identity:	289
Alignm E-value:	4.00001e-41
Alignm gaps (pig, cow):	41, 14
Conread position:	109-517
Cow position:	chr6:40713311-40713716 (view UCSC Genome Browser custom track)
Alignm length:	420
Alignm identity:	278
Alignm E-value:	6e-35
Alignm gaps (pig, cow):	30, 12