Cow genome map

Conread name: Ss1.1-rnca23b_e14.5

Conread position: 65-503
Cow position: chrX:4768957-4768538 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 284
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 90, 31

Conread position: 66-505
Cow position: chrX:45968375-45967948 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 288
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 71, 26

Conread position: 73-505
Cow position: chrX:13868926-13868480 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 287
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 64, 35

Conread position: 78-501
Cow position: chrX:7646468-7646049 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 286
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 17, 50

Conread position: 79-505
Cow position: chrX:30420736-30421153 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 288
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 40

Conread position: 80-500
Cow position: chrX:31294361-31294753 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 278
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 22

Conread position: 81-441
Cow position: chrX:5118286-5118656 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 18, 81

Conread position: 87-312
Cow position: chrX:12972886-12972664 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 19

Conread position: 87-410
Cow position: chrX:40685121-40685450 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 50, 19

Conread position: 91-469
Cow position: chrX:31252613-31252239 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 266
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 30

Conread position: 104-424
Cow position: chrX:41027352-41027020 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 19

Conread position: 105-499
Cow position: chrX:33493965-33493566 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 91

Conread position: 106-505
Cow position: chrX:37072576-37072192 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 273
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 33, 15

Conread position: 108-460
Cow position: chrX:4399306-4398956 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 244
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 13

Conread position: 108-488
Cow position: chrX:33001086-33000706 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 269
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 41, 13

Conread position: 108-489
Cow position: chrX:31729625-31729257 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 250
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 13

Conread position: 108-490
Cow position: chrX:38218901-38218507 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 271
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 13

Conread position: 108-499
Cow position: chrX:20887457-20887853 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 264
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 13

Conread position: 108-499
Cow position: chrX:46532302-46532718 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 279
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 13

Conread position: 108-503
Cow position: chrX:27175187-27174782 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 278
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 29, 13

Conread position: 108-505
Cow position: chrX:16762956-16762557 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 257
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 13

Conread position: 108-505
Cow position: chrX:20339705-20340105 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 274
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 89, 13

Conread position: 108-505
Cow position: chrX:38094336-38094739 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 13

Conread position: 112-405
Cow position: chrX:42927645-42927933 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 19, 9

Conread position: 113-503
Cow position: chrX:22624656-22624269 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 271
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 50, 5

Conread position: 114-502
Cow position: chrX:8731269-8730868 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 261
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 12

Conread position: 114-505
Cow position: chrX:35269039-35268676 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 256
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 9

Conread position: 118-499
Cow position: chrX:17964349-17964731 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 243
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 226, 12

Conread position: 118-524
Cow position: chrX:42011453-42011048 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 272
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 11

Conread position: 118-533
Cow position: chrX:1503499-1503092 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 277
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 15

Conread position: 121-425
Cow position: chrX:5919669-5919364 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 210
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 17, 224

Conread position: 121-505
Cow position: chrX:29601652-29602047 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 85

Conread position: 122-299
Cow position: chrX:2936129-2935952 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 80

Conread position: 122-383
Cow position: chrX:34836895-34837146 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 225, 15

Conread position: 122-410
Cow position: chrX:34504877-34505166 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 194
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 60

Conread position: 122-452
Cow position: chrX:21986125-21986459 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 177, 15

Conread position: 122-460
Cow position: chrX:25207685-25208016 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 234
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 15

Conread position: 122-460
Cow position: chrX:34792144-34792480 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 221, 15

Conread position: 122-489
Cow position: chrX:15546058-15545696 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 254
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 74

Conread position: 122-490
Cow position: chrX:161579-161221 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 241
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 15

Conread position: 122-501
Cow position: chrX:9201718-9201339 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 78

Conread position: 122-502
Cow position: chrX:8869228-8869620 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 269
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 15, 50

Conread position: 122-502
Cow position: chrX:20152024-20151639 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 257
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 177, 28

Conread position: 122-503
Cow position: chrX:31260448-31260842 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 266
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 99, 36

Conread position: 122-504
Cow position: chrX:14883781-14884175 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 63

Conread position: 122-505
Cow position: chrX:1615882-1616262 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 8

Conread position: 122-505
Cow position: chrX:13177305-13177679 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 73

Conread position: 122-505
Cow position: chrX:21672738-21672337 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 67

Conread position: 122-505
Cow position: chrX:30133144-30133538 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 262
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 63

Conread position: 122-505
Cow position: chrX:31436645-31436266 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 36

Conread position: 122-505
Cow position: chrX:31442663-31443035 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 266
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 40, 17

Conread position: 122-505
Cow position: chrX:35543060-35542677 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 75

Conread position: 122-505
Cow position: chrX:42380934-42381314 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 80

Conread position: 122-505
Cow position: chrX:45502314-45501934 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 6

Conread position: 122-523
Cow position: chrX:22074973-22074566 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 75

Conread position: 122-526
Cow position: chrX:34532694-34532290 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 43

Conread position: 122-527
Cow position: chrX:27431745-27432157 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 75

Conread position: 123-366
Cow position: chrX:19469340-19469574 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 123-382
Cow position: chrX:29050418-29050156 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 12, 47

Conread position: 123-501
Cow position: chrX:14973582-14973945 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 257
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 196, 14

Conread position: 123-505
Cow position: chrX:38964272-38963895 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 264
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 183, 14

Conread position: 123-505
Cow position: chrX:45429855-45430231 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 14

Conread position: 123-527
Cow position: chrX:15006984-15007389 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 269
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 205, 14

Conread position: 124-342
Cow position: chrX:22392814-22393034 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 40

Conread position: 124-502
Cow position: chrX:27446853-27446477 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 255
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 13, 34

Conread position: 125-500
Cow position: chrX:40035274-40035654 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 33

Conread position: 125-504
Cow position: chrX:9251998-9252391 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 271
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 219, 13

Conread position: 125-505
Cow position: chrX:12290883-12290521 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 260
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 13

Conread position: 125-505
Cow position: chrX:19930809-19930442 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 253
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 21

Conread position: 125-507
Cow position: chrX:17888257-17888622 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 266
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 188, 5

Conread position: 126-503
Cow position: chrX:38549612-38549236 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 269
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 32

Conread position: 126-505
Cow position: chrX:31250553-31250178 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 255
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 43

Conread position: 129-469
Cow position: chrX:24287769-24288111 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 68

Conread position: 129-497
Cow position: chrX:46587985-46587611 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 254
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 30

Conread position: 129-503
Cow position: chrX:28878013-28878372 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 242
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 215, 28

Conread position: 129-505
Cow position: chrX:32310269-32309892 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 257
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 17

Conread position: 129-505
Cow position: chrX:38642411-38642046 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 180, 27

Conread position: 129-505
Cow position: chrX:43527669-43527289 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 255
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 215, 29

Conread position: 131-505
Cow position: chrX:37489879-37489516 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 252
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 43

Conread position: 132-501
Cow position: chrX:24424243-24424598 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 24

Conread position: 132-505
Cow position: chrX:23092031-23091667 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 62

Conread position: 132-505
Cow position: chrX:40557518-40557890 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 63

Conread position: 133-505
Cow position: chrX:23513863-23514232 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 25

Conread position: 134-461
Cow position: chrX:46433646-46433311 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 225
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 11

Conread position: 135-376
Cow position: chrX:18272900-18273143 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 67

Conread position: 135-498
Cow position: chrX:4825678-4826035 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 237
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 60

Conread position: 135-502
Cow position: chrX:34402165-34401786 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 135-504
Cow position: chrX:33855065-33855446 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 21

Conread position: 136-343
Cow position: chrX:35985971-35985769 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 161, 21

Conread position: 136-414
Cow position: chrX:43115304-43115028 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 208, 20

Conread position: 136-431
Cow position: chrX:34314178-34313889 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 163, 20

Conread position: 136-431
Cow position: chrX:41871220-41870933 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 157, 13

Conread position: 136-435
Cow position: chrX:11084909-11085201 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 198
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 209, 24

Conread position: 136-439
Cow position: chrX:29680106-29680408 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 31, 20

Conread position: 136-440
Cow position: chrX:616102-616416 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 65

Conread position: 136-466
Cow position: chrX:169392-169701 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 219
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 227, 21

Conread position: 136-473
Cow position: chrX:32821186-32820847 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 18, 50

Conread position: 136-481
Cow position: chrX:23785802-23785463 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 233
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 13, 45

Conread position: 136-482
Cow position: chrX:43730070-43730406 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 234
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 183, 21

Conread position: 136-497
Cow position: chrX:41526373-41526730 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 248
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 165, 58

Conread position: 136-499
Cow position: chrX:48236973-48236603 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 244
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 117, 58

Conread position: 136-500
Cow position: chrX:40480711-40481081 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 258
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 47, 92

Conread position: 136-502
Cow position: chrX:5017265-5017619 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 263
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 52

Conread position: 136-503
Cow position: chrX:9650870-9651258 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 261
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 163, 19

Conread position: 136-503
Cow position: chrX:40269648-40269264 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 64

Conread position: 136-504
Cow position: chrX:878226-878584 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 253
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 168, 21

Conread position: 136-504
Cow position: chrX:12309232-12309602 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 262
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 51, 32

Conread position: 136-504
Cow position: chrX:27771814-27772169 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 253
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 51, 20

Conread position: 136-505
Cow position: chrX:618852-619222 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 64

Conread position: 136-505
Cow position: chrX:11717627-11717994 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 257
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 168, 58

Conread position: 136-505
Cow position: chrX:22482532-22482903 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 67

Conread position: 136-505
Cow position: chrX:27393872-27394228 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 21

Conread position: 136-505
Cow position: chrX:27705744-27705379 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 246
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 63

Conread position: 136-505
Cow position: chrX:34377096-34376743 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 248
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 203, 20

Conread position: 136-505
Cow position: chrX:34503076-34502706 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 256
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 184, 58

Conread position: 136-505
Cow position: chrX:38006616-38006982 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 41

Conread position: 136-505
Cow position: chrX:41674259-41673889 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 256
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 208, 32

Conread position: 136-506
Cow position: chrX:41123214-41122857 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 252
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 174, 20

Conread position: 136-507
Cow position: chrX:12979680-12980047 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 21

Conread position: 136-527
Cow position: chrX:41878778-41879171 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 264
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 35, 45

Conread position: 136-529
Cow position: chrX:8797403-8797008 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 21

Conread position: 136-529
Cow position: chrX:34412002-34411600 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 58

Conread position: 136-533
Cow position: chrX:13382479-13382080 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 277
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 183, 20

Conread position: 137-310
Cow position: chrX:16836136-16836301 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 137-371
Cow position: chrX:5135367-5135605 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 20

Conread position: 137-408
Cow position: chrX:26881411-26881685 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 156, 21

Conread position: 137-481
Cow position: chrX:31312182-31311835 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 20

Conread position: 137-503
Cow position: chrX:28865852-28866205 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 241
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 146, 19

Conread position: 137-505
Cow position: chrX:9635037-9635395 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 251
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 207, 20

Conread position: 137-505
Cow position: chrX:20697454-20697822 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 253
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 50, 60

Conread position: 138-334
Cow position: chrX:27306608-27306412 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 161, 62

Conread position: 138-383
Cow position: chrX:1466315-1466069 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 161, 18

Conread position: 138-466
Cow position: chrX:27145756-27145447 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 233
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 206, 23

Conread position: 138-475
Cow position: chrX:36068171-36067835 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 138-488
Cow position: chrX:37780956-37781315 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 18

Conread position: 138-498
Cow position: chrX:10831336-10831704 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 250
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 83, 19

Conread position: 138-503
Cow position: chrX:31489672-31489300 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 250
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 168, 41

Conread position: 138-505
Cow position: chrX:5872469-5872099 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 251
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 49, 19

Conread position: 138-505
Cow position: chrX:14599684-14599315 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 18

Conread position: 138-507
Cow position: chrX:42247030-42247400 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 19

Conread position: 138-526
Cow position: chrX:11656233-11655849 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 19

Conread position: 142-505
Cow position: chrX:126917-126578 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 242
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 142-505
Cow position: chrX:30543133-30543500 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 13, 53

Conread position: 142-505
Cow position: chrX:41238203-41238577 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 268
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 7, 60

Conread position: 142-505
Cow position: chrX:46072667-46073036 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 148, 57

Conread position: 143-369
Cow position: chrX:4152884-4153113 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 147, 14

Conread position: 143-502
Cow position: chrX:13191409-13191755 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 237
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 56

Conread position: 143-503
Cow position: chrX:152047-151689 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 246
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 175, 14

Conread position: 143-505
Cow position: chrX:4043720-4044064 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 17, 31

Conread position: 143-505
Cow position: chrX:5900609-5900243 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 246
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 199, 14

Conread position: 143-505
Cow position: chrX:11633830-11633464 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 241
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 156, 13

Conread position: 143-505
Cow position: chrX:13647638-13647998 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 23

Conread position: 143-505
Cow position: chrX:33640124-33639757 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 241
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 163, 51

Conread position: 143-507
Cow position: chrX:44397157-44396799 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 257
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 176, 24

Conread position: 143-538
Cow position: chrX:17795130-17794736 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 57

Conread position: 144-489
Cow position: chrX:17726122-17725776 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 17

Conread position: 144-505
Cow position: chrX:6414187-6413832 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 200, 13

Conread position: 144-521
Cow position: chrX:32623718-32623351 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 258
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 267, 21

Conread position: 144-534
Cow position: chrX:38853346-38852949 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 145-505
Cow position: chrX:20801915-20801565 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 236
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 83, 15

Conread position: 146-503
Cow position: chrX:30962732-30963084 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 236
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 43

Conread position: 146-507
Cow position: chrX:45110800-45110439 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 249
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 97, 11

Conread position: 146-529
Cow position: chrX:32330314-32329925 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 256
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 42

Conread position: 148-489
Cow position: chrX:10959251-10959599 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 227
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 155, 52

Conread position: 148-502
Cow position: chrX:4632713-4633062 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 26, 20

Conread position: 149-505
Cow position: chrX:29289721-29289362 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 22, 32

Conread position: 150-479
Cow position: chrX:42235382-42235722 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 230
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 136, 44

Conread position: 150-489
Cow position: chrX:34565425-34565094 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 140, 20

Conread position: 150-527
Cow position: chrX:11073049-11073429 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 260
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 160, 44

Conread position: 151-426
Cow position: chrX:37986366-37986100 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 150, 43

Conread position: 151-507
Cow position: chrX:17630660-17631018 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 44

Conread position: 152-355
Cow position: chrX:46429679-46429884 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 147, 42

Conread position: 152-439
Cow position: chrX:9365536-9365822 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 192, 42

Conread position: 152-501
Cow position: chrX:7695888-7695549 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 158, 15

Conread position: 152-505
Cow position: chrX:17662458-17662811 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 29

Conread position: 153-505
Cow position: chrX:37119731-37119385 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 233
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 146, 14

Conread position: 155-489
Cow position: chrX:917231-917570 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 234
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 164, 39

Conread position: 156-439
Cow position: chrX:20584464-20584170 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 142, 45

Conread position: 156-502
Cow position: chrX:6690124-6690459 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 188, 38

Conread position: 156-503
Cow position: chrX:29121183-29120846 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 163, 38

Conread position: 156-505
Cow position: chrX:10411848-10412200 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 20, 40

Conread position: 156-505
Cow position: chrX:44961887-44961533 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 150, 45

Conread position: 158-507
Cow position: chrX:1514285-1514617 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 210, 36

Conread position: 160-489
Cow position: chrX:1499798-1499471 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 35

Conread position: 160-504
Cow position: chrX:37910576-37910239 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 141, 8

Conread position: 160-505
Cow position: chrX:6544386-6544042 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 34

Conread position: 160-507
Cow position: chrX:37232539-37232193 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 34

Conread position: 160-508
Cow position: chrX:7278043-7277705 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 235
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 87, 34

Conread position: 161-505
Cow position: chrX:37574971-37574642 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 39

Conread position: 162-500
Cow position: chrX:8925828-8925496 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 237
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 182, 11

Conread position: 162-500
Cow position: chrX:18694801-18695129 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 22

Conread position: 167-498
Cow position: chrX:35273489-35273144 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 244
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 129, 53

Conread position: 167-500
Cow position: chrX:47248653-47248995 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 219
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 54, 68

Conread position: 167-503
Cow position: chrX:41884287-41884630 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 27

Conread position: 167-505
Cow position: chrX:39558224-39558562 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 240
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 139, 20

Conread position: 167-505
Cow position: chrX:42469816-42470151 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 27

Conread position: 168-505
Cow position: chrX:34554846-34554512 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 12

Conread position: 169-527
Cow position: chrX:11938810-11939162 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 84, 25

Conread position: 171-489
Cow position: chrX:1175860-1176181 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 12

Conread position: 172-481
Cow position: chrX:47362503-47362802 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 127, 28

Conread position: 174-489
Cow position: chrX:43779724-43780051 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 218
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 141

Conread position: 177-505
Cow position: chrX:21686734-21686400 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 215
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 134, 24

Conread position: 178-498
Cow position: chrX:32420326-32420011 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 9, 19

Conread position: 180-499
Cow position: chrX:21004796-21004474 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 124, 19

Conread position: 180-504
Cow position: chrX:7572017-7571693 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 123, 14

Conread position: 180-505
Cow position: chrX:7509251-7508925 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 14

Conread position: 180-527
Cow position: chrX:3130684-3130346 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 7, 11

Conread position: 180-527
Cow position: chrX:11082510-11082851 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 239
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 51, 14

Conread position: 181-498
Cow position: chrX:35224407-35224093 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 163, 13

Conread position: 183-503
Cow position: chrX:26625562-26625889 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 109, 17

Conread position: 188-501
Cow position: chrX:47145191-47144877 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 13

Conread position: 193-505
Cow position: chrX:27106361-27106044 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 214
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 45

Conread position: 194-466
Cow position: chrX:24768760-24769039 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 185
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 117, 101

Conread position: 196-504
Cow position: chrX:42498950-42499242 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 209, 29

Conread position: 197-468
Cow position: chrX:47186227-47186498 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 167, 94

Conread position: 197-504
Cow position: chrX:27680495-27680190 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 107, 167

Conread position: 197-505
Cow position: chrX:7722085-7721770 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 56, 28

Conread position: 197-505
Cow position: chrX:11856527-11856215 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 109, 288

Conread position: 197-505
Cow position: chrX:13913172-13912865 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 74, 154

Conread position: 197-506
Cow position: chrX:45414207-45414515 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 147, 96

Conread position: 198-499
Cow position: chrX:7497338-7497035 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 204
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 77, 5

Conread position: 198-499
Cow position: chrX:34238815-34238512 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 206
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 91, 151

Conread position: 198-501
Cow position: chrX:28013346-28013650 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 205
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 69

Conread position: 198-505
Cow position: chrX:4865329-4865037 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 205
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 120, 52

Conread position: 198-506
Cow position: chrX:27508928-27509235 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 102, 20

Conread position: 199-498
Cow position: chrX:24365726-24366040 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 300

Conread position: 199-505
Cow position: chrX:27516616-27516318 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 108, 48

Conread position: 200-498
Cow position: chrX:28134432-28134137 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 145, 8

Conread position: 200-505
Cow position: chrX:6488670-6488372 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 142, 24

Conread position: 200-505
Cow position: chrX:9041150-9041443 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 205
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 108, 78

Conread position: 200-505
Cow position: chrX:19690309-19690004 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 128

Conread position: 200-505
Cow position: chrX:34441360-34441664 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 98, 64

Conread position: 201-445
Cow position: chrX:27228219-27227969 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 105, 82

Conread position: 201-457
Cow position: chrX:8917487-8917226 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 68

Conread position: 201-465
Cow position: chrX:15231567-15231832 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 41

Conread position: 201-466
Cow position: chrX:4279025-4279290 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 182, 94

Conread position: 201-466
Cow position: chrX:7445180-7444909 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 178
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 108, 94

Conread position: 201-469
Cow position: chrX:36061253-36060973 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 182
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 201-481
Cow position: chrX:3488798-3489075 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 38

Conread position: 201-486
Cow position: chrX:47484171-47484467 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 52, 69

Conread position: 201-488
Cow position: chrX:40809786-40809489 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 66, 87

Conread position: 201-492
Cow position: chrX:29544784-29545081 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 94, 115

Conread position: 201-497
Cow position: chrX:25035289-25035594 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 143, 98

Conread position: 201-498
Cow position: chrX:46032634-46032929 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 143, 108

Conread position: 201-499
Cow position: chrX:34543877-34543579 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 106, 142

Conread position: 201-499
Cow position: chrX:42171201-42171508 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 102, 0

Conread position: 201-499
Cow position: chrX:48652628-48652936 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 203
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 69

Conread position: 201-502
Cow position: chrX:3580037-3579735 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 107, 91

Conread position: 201-502
Cow position: chrX:16996585-16996293 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 82, 132

Conread position: 201-502
Cow position: chrX:47300810-47301115 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 211
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 52, 69

Conread position: 201-502
Cow position: chrX:47302784-47303091 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 69

Conread position: 201-503
Cow position: chrX:11844148-11844453 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 149

Conread position: 201-503
Cow position: chrX:17231828-17231522 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 69

Conread position: 201-503
Cow position: chrX:22822139-22821835 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 143, 92

Conread position: 201-503
Cow position: chrX:35258638-35258944 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 122, 94

Conread position: 201-503
Cow position: chrX:38935372-38935069 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 101, 44

Conread position: 201-503
Cow position: chrX:47967700-47967387 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 209
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 52, 69

Conread position: 201-504
Cow position: chrX:21593374-21593070 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 119, 32

Conread position: 201-504
Cow position: chrX:26493099-26492789 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 76, 129

Conread position: 201-504
Cow position: chrX:45403732-45404047 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 52, 67

Conread position: 201-505
Cow position: chrX:755057-754744 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 47

Conread position: 201-505
Cow position: chrX:1055288-1055602 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 52, 230

Conread position: 201-505
Cow position: chrX:2467977-2467665 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 52, 67

Conread position: 201-505
Cow position: chrX:3654701-3654390 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 208
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 31, 36

Conread position: 201-505
Cow position: chrX:4268971-4269282 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 62, 93

Conread position: 201-505
Cow position: chrX:9360980-9360669 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 143, 93

Conread position: 201-505
Cow position: chrX:9416591-9416907 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 208
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 44, 72

Conread position: 201-505
Cow position: chrX:10865782-10866081 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 50

Conread position: 201-505
Cow position: chrX:14222168-14221865 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 68

Conread position: 201-505
Cow position: chrX:15815177-15814883 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 118, 85

Conread position: 201-505
Cow position: chrX:21642389-21642692 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 143, 82

Conread position: 201-505
Cow position: chrX:23563698-23564011 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 52, 67

Conread position: 201-505
Cow position: chrX:23583654-23583344 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 91, 113

Conread position: 201-505
Cow position: chrX:34454750-34454455 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 42, 71

Conread position: 201-505
Cow position: chrX:36283433-36283131 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 143, 66

Conread position: 201-505
Cow position: chrX:36976044-36975735 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 91, 67

Conread position: 201-505
Cow position: chrX:37843810-37843506 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 143, 15

Conread position: 201-505
Cow position: chrX:40826658-40826961 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 84

Conread position: 201-505
Cow position: chrX:44054895-44054587 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 143, 91

Conread position: 201-505
Cow position: chrX:46722641-46722955 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 59, 74

Conread position: 201-505
Cow position: chrX:47344389-47344080 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 52, 69

Conread position: 201-505
Cow position: chrX:47873243-47873555 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 206
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 52, 69

Conread position: 201-505
Cow position: chrX:48010697-48010380 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 212
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 69

Conread position: 201-506
Cow position: chrX:47481889-47481584 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 200
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 143, 40

Conread position: 201-517
Cow position: chrX:842250-841932 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 143, 92

Conread position: 201-527
Cow position: chrX:42492430-42492750 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 221
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 167, 92

Conread position: 201-531
Cow position: chrX:48194942-48195281 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 69

Conread position: 202-499
Cow position: chrX:7178988-7178700 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 45

Conread position: 202-504
Cow position: chrX:32170797-32171095 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 203
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 47

Conread position: 202-505
Cow position: chrX:27594086-27594396 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 200
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 93

Conread position: 202-505
Cow position: chrX:34662754-34663057 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 92, 217

Conread position: 203-499
Cow position: chrX:2301016-2300725 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 194
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 175

Conread position: 203-499
Cow position: chrX:6278407-6278714 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 103, 0

Conread position: 203-499
Cow position: chrX:45598514-45598812 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 198
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 141, 63

Conread position: 203-503
Cow position: chrX:27176221-27176532 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 207
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 19

Conread position: 203-505
Cow position: chrX:6265508-6265800 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 99, 27

Conread position: 203-505
Cow position: chrX:7351388-7351085 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 141, 22

Conread position: 203-505
Cow position: chrX:21064374-21064072 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 202
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 99, 232

Conread position: 203-505
Cow position: chrX:25338279-25337965 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 208
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 203-505
Cow position: chrX:26440694-26440994 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 47

Conread position: 203-505
Cow position: chrX:31948844-31949145 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 98, 144

Conread position: 204-490
Cow position: chrX:12405291-12405576 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 90

Conread position: 204-502
Cow position: chrX:29542127-29542430 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 204-503
Cow position: chrX:37415982-37416287 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 203
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 33

Conread position: 207-505
Cow position: chrX:17542047-17541750 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 140

Conread position: 209-505
Cow position: chrX:5638084-5638383 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 97, 83

Conread position: 209-505
Cow position: chrX:42507563-42507861 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 200
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 135, 83

Conread position: 210-539
Cow position: chrX:48800622-48800290 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 231
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 138

Conread position: 211-504
Cow position: chrX:16416592-16416295 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 97, 65

Conread position: 211-505
Cow position: chrX:13785280-13785581 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 221
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 92, 18

Conread position: 215-570
Cow position: chrX:11589509-11589868 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 129, 83

Conread position: 217-505
Cow position: chrX:38071689-38071985 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 127, 105

Conread position: 221-507
Cow position: chrX:678482-678784 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 78, 189

Conread position: 229-505
Cow position: chrX:19022240-19022523 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 183
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 115, 66

Conread position: 230-498
Cow position: chrX:26875817-26876089 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 73, 256

Conread position: 231-506
Cow position: chrX:24968749-24969031 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 182
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 113, 76

Conread position: 236-505
Cow position: chrX:30171648-30171924 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 180
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 108, 59

Conread position: 239-505
Cow position: chrX:34991091-34990827 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 65, 107

Conread position: 241-505
Cow position: chrX:40648039-40647764 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 6, 27

Conread position: 244-505
Cow position: chrX:11675114-11674850 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 22

Conread position: 248-505
Cow position: chrX:32127947-32128194 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 5, 19

Conread position: 249-489
Cow position: chrX:4091685-4091449 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 47

Conread position: 249-505
Cow position: chrX:15997208-15996940 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 46

Conread position: 250-500
Cow position: chrX:7718893-7718645 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 97, 56

Conread position: 251-450
Cow position: chrX:36356155-36355956 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 117, 61

Conread position: 251-497
Cow position: chrX:36961684-36961428 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 93, 42

Conread position: 251-505
Cow position: chrX:32743581-32743324 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 180

Conread position: 251-505
Cow position: chrX:37836629-37836372 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 61

Conread position: 251-505
Cow position: chrX:40789255-40788990 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 252-505
Cow position: chrX:10306717-10306456 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 41

Conread position: 254-490
Cow position: chrX:31340751-31340505 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 44, 52

Conread position: 254-496
Cow position: chrX:39938483-39938728 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 49

Conread position: 254-500
Cow position: chrX:15139507-15139753 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 90, 39

Conread position: 254-503
Cow position: chrX:2186294-2186046 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 109

Conread position: 254-505
Cow position: chrX:2417440-2417698 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 53

Conread position: 254-505
Cow position: chrX:14900690-14900935 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 65, 39

Conread position: 254-505
Cow position: chrX:28835862-28836118 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 41, 130

Conread position: 254-505
Cow position: chrX:30245013-30245269 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 90, 33

Conread position: 254-505
Cow position: chrX:35681382-35681131 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 65, 175

Conread position: 254-505
Cow position: chrX:37497403-37497661 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 53

Conread position: 254-505
Cow position: chrX:42994653-42994400 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 90, 104

Conread position: 254-505
Cow position: chrX:43049383-43049128 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 39

Conread position: 256-504
Cow position: chrX:44053298-44053045 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 256-505
Cow position: chrX:1749467-1749723 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 51

Conread position: 256-505
Cow position: chrX:1975556-1975811 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 88, 51

Conread position: 256-505
Cow position: chrX:2362541-2362285 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 88, 51

Conread position: 256-505
Cow position: chrX:3388148-3387892 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 169
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 88, 51

Conread position: 256-505
Cow position: chrX:9018261-9018517 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 169
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 88, 61

Conread position: 256-505
Cow position: chrX:11860200-11860456 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 169
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 88, 51

Conread position: 256-505
Cow position: chrX:12033013-12032757 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 51

Conread position: 256-505
Cow position: chrX:15781623-15781367 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 88, 51

Conread position: 256-505
Cow position: chrX:19774438-19774694 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 51

Conread position: 256-505
Cow position: chrX:20021605-20021349 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 88, 51

Conread position: 256-505
Cow position: chrX:22557543-22557287 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 51

Conread position: 256-505
Cow position: chrX:24904126-24903870 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 51

Conread position: 256-505
Cow position: chrX:29844434-29844690 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 169
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 51

Conread position: 256-505
Cow position: chrX:30899345-30899601 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 88, 51

Conread position: 256-505
Cow position: chrX:36479974-36479718 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 88, 51

Conread position: 256-505
Cow position: chrX:39667151-39667407 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 55

Conread position: 256-505
Cow position: chrX:41413742-41413998 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 51

Conread position: 257-505
Cow position: chrX:2383522-2383275 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 37

Conread position: 257-505
Cow position: chrX:45015612-45015371 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 6

Conread position: 257-507
Cow position: chrX:19015474-19015226 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 36, 81

Conread position: 260-505
Cow position: chrX:46381743-46381990 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 79

Conread position: 261-489
Cow position: chrX:30832819-30833044 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 86, 32

Conread position: 261-503
Cow position: chrX:9954172-9953929 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 79

Conread position: 261-503
Cow position: chrX:40567631-40567387 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 108, 43

Conread position: 261-505
Cow position: chrX:9855331-9855086 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 33

Conread position: 261-505
Cow position: chrX:19188964-19188722 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 84, 28

Conread position: 261-505
Cow position: chrX:20791782-20792032 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 261-505
Cow position: chrX:35413651-35413418 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 21

Conread position: 261-505
Cow position: chrX:42461711-42461960 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 261-505
Cow position: chrX:42875016-42874764 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 58, 32

Conread position: 261-507
Cow position: chrX:38439514-38439257 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 261-535
Cow position: chrX:41743947-41743667 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 49, 161

Conread position: 262-496
Cow position: chrX:41166930-41167170 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 262-507
Cow position: chrX:23970411-23970173 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 48, 85

Conread position: 263-486
Cow position: chrX:40116448-40116226 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 32, 61

Conread position: 266-505
Cow position: chrX:20710103-20709857 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 44, 57

Conread position: 267-489
Cow position: chrX:17908261-17908482 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 52, 28

Conread position: 267-498
Cow position: chrX:26286008-26285772 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 267-499
Cow position: chrX:9997307-9997542 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 31

Conread position: 267-500
Cow position: chrX:6234423-6234658 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 153

Conread position: 267-501
Cow position: chrX:29876046-29876277 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 66

Conread position: 267-502
Cow position: chrX:20752281-20752048 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 36

Conread position: 267-505
Cow position: chrX:28157527-28157271 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 28

Conread position: 267-539
Cow position: chrX:41199133-41198855 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 39, 27

Conread position: 268-503
Cow position: chrX:10096058-10095814 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 268-503
Cow position: chrX:36249835-36250074 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 268-505
Cow position: chrX:12249831-12249591 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 29, 59

Conread position: 268-505
Cow position: chrX:34754166-34754406 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 37

Conread position: 268-506
Cow position: chrX:20579721-20579967 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 27

Conread position: 268-527
Cow position: chrX:27442531-27442793 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 76, 37

Conread position: 268-534
Cow position: chrX:33466634-33466370 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 25

Conread position: 270-483
Cow position: chrX:45875021-45874806 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 75, 7

Conread position: 271-498
Cow position: chrX:23497644-23497872 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 36, 135

Conread position: 271-503
Cow position: chrX:17498108-17497884 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 24

Conread position: 271-503
Cow position: chrX:47232855-47232625 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 17

Conread position: 271-505
Cow position: chrX:14925024-14924786 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 48, 28

Conread position: 271-505
Cow position: chrX:22813091-22812848 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 31, 66

Conread position: 271-505
Cow position: chrX:24105647-24105412 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 35

Conread position: 272-466
Cow position: chrX:11982590-11982389 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 272-466
Cow position: chrX:15094392-15094191 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 272-466
Cow position: chrX:19473134-19473335 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 272-503
Cow position: chrX:4750281-4750510 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 31, 191

Conread position: 272-503
Cow position: chrX:5598952-5599190 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 272-503
Cow position: chrX:6195728-6195966 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 272-503
Cow position: chrX:20583044-20582818 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 23, 63

Conread position: 272-504
Cow position: chrX:10444388-10444627 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:238852-239092 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:3658028-3658268 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:5646078-5646318 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:7510162-7509923 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:10123331-10123561 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 112, 23

Conread position: 272-505
Cow position: chrX:10922545-10922785 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:11664204-11663964 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:13448296-13448056 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:16478928-16478688 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:19494934-19495174 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:20031808-20032045 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 158
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 58, 35

Conread position: 272-505
Cow position: chrX:20099348-20099108 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:22608566-22608806 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:23109783-23109545 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 35

Conread position: 272-505
Cow position: chrX:23140335-23140096 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:23235856-23235616 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:23827615-23827375 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:25288653-25288893 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:27352511-27352271 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:27403920-27404160 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:28057769-28058009 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:28555409-28555649 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:29508803-29508563 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 39, 23

Conread position: 272-505
Cow position: chrX:29509417-29509658 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 14

Conread position: 272-505
Cow position: chrX:30538126-30538366 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:32038817-32039057 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:34095587-34095347 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:34135114-34135354 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:35498112-35497872 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:37060765-37061005 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:38442988-38442748 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:39731539-39731299 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:41488140-41488379 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:44168283-44168523 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:47538857-47538617 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 35

Conread position: 272-505
Cow position: chrX:48165549-48165309 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 72, 35

Conread position: 273-503
Cow position: chrX:8900048-8899812 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 71, 20

Conread position: 275-504
Cow position: chrX:4942743-4942963 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 32

Conread position: 276-500
Cow position: chrX:47454151-47453917 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 147

Conread position: 277-466
Cow position: chrX:4343770-4343574 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 18

Conread position: 277-466
Cow position: chrX:16279670-16279474 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 18

Conread position: 277-466
Cow position: chrX:47053914-47054109 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 18

Conread position: 277-490
Cow position: chrX:8484097-8483881 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 17

Conread position: 277-500
Cow position: chrX:9425726-9425951 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 70, 26

Conread position: 277-505
Cow position: chrX:4621933-4622168 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 18

Conread position: 277-505
Cow position: chrX:5123340-5123575 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 34, 18

Conread position: 277-505
Cow position: chrX:10428560-10428325 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 18

Conread position: 277-505
Cow position: chrX:12001126-12001361 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 30

Conread position: 277-505
Cow position: chrX:14846053-14846288 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 34, 18

Conread position: 277-505
Cow position: chrX:15505312-15505077 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 30

Conread position: 277-505
Cow position: chrX:17783520-17783285 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 20

Conread position: 277-505
Cow position: chrX:19333148-19333383 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 30

Conread position: 277-505
Cow position: chrX:20743007-20742772 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 18

Conread position: 277-505
Cow position: chrX:24450154-24450389 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 30

Conread position: 277-505
Cow position: chrX:26276159-26275925 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 18

Conread position: 277-505
Cow position: chrX:45904199-45903964 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 34, 18

Conread position: 277-505
Cow position: chrX:46045062-46044830 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 40

Conread position: 277-520
Cow position: chrX:8070682-8070926 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 67, 25

Conread position: 277-521
Cow position: chrX:15438632-15438883 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 18

Conread position: 277-528
Cow position: chrX:11562174-11561915 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 216

Conread position: 278-490
Cow position: chrX:8991901-8991688 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 160

Conread position: 278-499
Cow position: chrX:41790427-41790653 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 83

Conread position: 278-501
Cow position: chrX:13265607-13265830 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 18, 9

Conread position: 278-503
Cow position: chrX:35042242-35042007 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 8

Conread position: 278-505
Cow position: chrX:28105934-28105707 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 16

Conread position: 279-505
Cow position: chrX:7425485-7425251 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 281-510
Cow position: chrX:11410020-11410246 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 48

Conread position: 282-505
Cow position: chrX:42338937-42339150 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 11

Conread position: 283-503
Cow position: chrX:17271274-17271501 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 15

Conread position: 283-505
Cow position: chrX:2648343-2648564 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 15

Conread position: 286-480
Cow position: chrX:1505719-1505523 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 9

Conread position: 287-503
Cow position: chrX:35609999-35609774 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 0

Conread position: 287-507
Cow position: chrX:16283936-16284163 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 57, 20

Conread position: 288-512
Cow position: chrX:42086862-42086640 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 80, 15

Conread position: 289-504
Cow position: chrX:28111516-28111293 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 10, 35

Conread position: 292-503
Cow position: chrX:7513513-7513304 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 48

Conread position: 293-472
Cow position: chrX:7336830-7336645 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 293-489
Cow position: chrX:10302339-10302140 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 90

Conread position: 293-505
Cow position: chrX:45412656-45412869 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 99

Conread position: 294-457
Cow position: chrX:14003640-14003811 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 294-510
Cow position: chrX:30763419-30763640 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 50

Conread position: 295-505
Cow position: chrX:11806013-11806231 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 295-505
Cow position: chrX:19019105-19019326 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 20, 128

Conread position: 295-527
Cow position: chrX:24318064-24317828 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 51

Conread position: 296-503
Cow position: chrX:41403979-41403760 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 296-503
Cow position: chrX:41410527-41410308 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 296-505
Cow position: chrX:40452212-40452427 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 16

Conread position: 298-500
Cow position: chrX:35387906-35388115 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 298-504
Cow position: chrX:40183348-40183563 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 46, 14

Conread position: 299-477
Cow position: chrX:31256860-31256681 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 45, 13

Conread position: 299-499
Cow position: chrX:21665598-21665802 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 23

Conread position: 299-505
Cow position: chrX:45566631-45566416 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 300-489
Cow position: chrX:24201181-24200991 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 44, 175

Conread position: 300-505
Cow position: chrX:15485630-15485842 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 300-505
Cow position: chrX:21663299-21663095 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 116, 45

Conread position: 300-505
Cow position: chrX:27514863-27514654 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 50, 33

Conread position: 301-505
Cow position: chrX:28846888-28847093 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 43, 114

Conread position: 301-505
Cow position: chrX:32020126-32020336 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 303-516
Cow position: chrX:46315385-46315606 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 5, 168

Conread position: 310-505
Cow position: chrX:25411826-25411626 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 190

Conread position: 312-501
Cow position: chrX:44063738-44063927 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 312-504
Cow position: chrX:48684242-48684436 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 116

Conread position: 312-505
Cow position: chrX:33020466-33020272 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 58

Conread position: 314-502
Cow position: chrX:12116026-12115828 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 314-505
Cow position: chrX:25419177-25419375 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 190

Conread position: 314-505
Cow position: chrX:35284600-35284408 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 102

Conread position: 314-505
Cow position: chrX:38967628-38967436 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 30, 92

Conread position: 314-505
Cow position: chrX:45694082-45693892 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 16

Conread position: 317-505
Cow position: chrX:16541694-16541890 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 187

Conread position: 319-501
Cow position: chrX:46429885-46430068 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 14

Conread position: 321-504
Cow position: chrX:1978484-1978297 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 24

Conread position: 325-527
Cow position: chrX:44731567-44731356 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 330-505
Cow position: chrX:4123802-4123621 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 96

Conread position: 335-504
Cow position: chrX:877069-877236 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 16

Conread position: 336-505
Cow position: chrX:42855372-42855194 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 343-531
Cow position: chrX:29770223-29770419 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 6, 0

Conread position: 346-483
Cow position: chrX:37541071-37540932 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 74

Conread position: 346-502
Cow position: chrX:16324018-16324175 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 77

Conread position: 346-503
Cow position: chrX:32978311-32978468 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 17

Conread position: 346-504
Cow position: chrX:23061392-23061241 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 55

Conread position: 347-505
Cow position: chrX:25036750-25036915 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 348-505
Cow position: chrX:10437715-10437879 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 348-505
Cow position: chrX:15596988-15596824 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 156

Conread position: 348-505
Cow position: chrX:25238118-25237963 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 12

Conread position: 348-505
Cow position: chrX:48371044-48370882 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 351-499
Cow position: chrX:36778353-36778199 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 366-529
Cow position: chrX:2523800-2523970 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 367-504
Cow position: chrX:21795420-21795283 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 130

Conread position: 368-503
Cow position: chrX:31745122-31745259 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 22

Conread position: 369-505
Cow position: chrX:33205072-33205206 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 10

Conread position: 376-574
Cow position: chrX:20787264-20787461 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 5, 36

Conread position: 377-484
Cow position: chrX:18812168-18812061 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 377-505
Cow position: chrX:10415613-10415740 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 379-498
Cow position: chrX:16531909-16531790 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 379-500
Cow position: chrX:6640037-6639916 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 379-503
Cow position: chrX:45787563-45787442 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 379-504
Cow position: chrX:8492842-8492971 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 379-505
Cow position: chrX:7382235-7382109 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 390-505
Cow position: chrX:33519522-33519403 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 392-503
Cow position: chrX:5856424-5856539 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 392-512
Cow position: chrX:23017905-23017780 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 393-505
Cow position: chrX:32870885-32871000 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 80

Conread position: 395-505
Cow position: chrX:29193903-29193794 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 57

Conread position: 405-505
Cow position: chrX:39555930-39556031 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 412-521
Cow position: chrX:22115403-22115512 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.