Cow genome map


           Conread name:
           Ss1.1-rnca24b_b1.5
        

               Conread position:
               238-413
               

               Cow position:
               chr15:31409107-31408928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               12, 122
               

               Conread position:
               244-413
               

               Cow position:
               chr15:47771323-47771158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               36, 122
               

               Conread position:
               246-391
               

               Cow position:
               chr15:21439476-21439328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               247-420
               

               Cow position:
               chr15:47444107-47443931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 162
               

               Conread position:
               250-413
               

               Cow position:
               chr15:34715371-34715541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               251-413
               

               Cow position:
               chr15:10829435-10829266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               251-424
               

               Cow position:
               chr15:40347991-40347809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               7, 131
               

               Conread position:
               253-423
               

               Cow position:
               chr15:18043939-18044120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 111
               

               Conread position:
               271-424
               

               Cow position:
               chr15:36362932-36363087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               10, 139
               
Show alignments to all cow chromosomes.