Cow genome map


           Conread name:
           Ss1.1-rnca24b_b1.5
        

               Conread position:
               246-424
               

               Cow position:
               chr21:49646964-49647152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               251-413
               

               Cow position:
               chr21:17382293-17382464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               253-413
               

               Cow position:
               chr21:18082605-18082437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               26, 161
               

               Conread position:
               255-413
               

               Cow position:
               chr21:4262096-4261931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               24, 137
               

               Conread position:
               279-413
               

               Cow position:
               chr21:11299785-11299928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               284-424
               

               Cow position:
               chr21:33197162-33197017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 74
               

               Conread position:
               315-424
               

               Cow position:
               chr21:22743887-22744000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               91, 0
               
Show alignments to all cow chromosomes.