Cow genome map
| Conread name: | Ss1.1-rnca31b_e11.5.5 |
| Conread position: | 3-181 |
| Cow position: | chr4:2955162-2955340 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 243-336 |
| Cow position: | chr4:2960276-2960369 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 902-1003 |
| Cow position: | chr4:2969503-2969604 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1048-1147 |
| Cow position: | chr4:2969870-2969969 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1201-1309 |
| Cow position: | chr4:2970625-2970733 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1362-1462 |
| Cow position: | chr4:2971258-2971358 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1515-1615 |
| Cow position: | chr4:2972775-2972875 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1876-1975 |
| Cow position: | chr4:2977232-2977331 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1971-2083 |
| Cow position: | chr4:2978508-2978620 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2299-2407 |
| Cow position: | chr4:2981429-2981537 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2515-2677 |
| Cow position: | chr4:2983832-2983994 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2677-2785 |
| Cow position: | chr4:2984964-2985072 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2784-2891 |
| Cow position: | chr4:2985736-2985843 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2945-3053 |
| Cow position: | chr4:2986330-2986438 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3102-3217 |
| Cow position: | chr4:2987239-2987353 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 3254-3379 |
| Cow position: | chr4:2987985-2988108 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 3379-3639 |
| Cow position: | chr4:2988658-2988918 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3637-3822 |
| Cow position: | chr4:2989330-2989515 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3821-4092 |
| Cow position: | chr4:2990175-2990448 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 0 |
Show alignments to all cow chromosomes.